AT1G17545

protein serine/threonine phosphatase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0018325
Physical Location & Seq
Forward (+)
6033109 .. 6033908
800 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G17545.1

Sequence Viewer

Length: 540 bp
ATGAGGAAATCCAAAGCTAATAATGATTTTCGTATAACAAACAGCCGTGTACAAGCGAGTGTGGAATTTAATAATAGTTGTGGACGCTACAATGGAAGTGGAATAGAGGATCATGGGCGAGTTCTTGCTACGTCCATTATCCTGAATGATGATGCGGTTCCCACAACACAAGTCCTTATTACTACAAGTCATCATGATAATGTAGCAAAGAGGAAGGAGAGCTTTATCTCATTTTTCAAACTACCTATCAGAATGCTTATGTGTGATCATGAAGGGATAATAAGTCCAACGCTCACATGTCTCACTAGTCACTTCTTCGGAATTTATGATGGCCACAGAAGAAGCAGACCTGTTTCTGGTTCTGTTTCTTCTGATGATAGGATGGTTCTTCAGGCTGTTTCCCCTGAGACCGTCGGATCAACTGCTGTTGTTGCTTTGGTTTGCTCATCACATATCATAGTTTCCAACTGTGGTGGTTCAAGAGTGGTTTTACTCCGCGGCAAAGAATCCATGCCTTTATCAGTTGATCAGAAAGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0001932 GO:0001933 GO:0003006 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005794 GO:0005801 GO:0005829 GO:0005886 GO:0006464 GO:0006469 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009266 GO:0009314 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009657 GO:0009658 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009788 GO:0009791 GO:0009892 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010109 GO:0010118 GO:0010119 GO:0010150 GO:0010154 GO:0010162 GO:0010205 GO:0010359 GO:0010360 GO:0010431 GO:0010563 GO:0010605 GO:0010646 GO:0010647 GO:0010648 GO:0012505 GO:0016020 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0021700 GO:0022414 GO:0022611 GO:0022898 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0031090 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0032268 GO:0032269 GO:0032409 GO:0032410 GO:0032412 GO:0032413 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0032879 GO:0033106 GO:0033673 GO:0033993 GO:0034762 GO:0034763 GO:0034765 GO:0034766 GO:0036211 GO:0042221 GO:0042325 GO:0042326 GO:0042548 GO:0042578 GO:0043086 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043271 GO:0043412 GO:0043467 GO:0043549 GO:0044070 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045859 GO:0045936 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048581 GO:0048582 GO:0048583 GO:0048584 GO:0048585 GO:0048608 GO:0048609 GO:0048731 GO:0048827 GO:0048838 GO:0048856 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051093 GO:0051094 GO:0051171 GO:0051172 GO:0051174 GO:0051239 GO:0051240 GO:0051241 GO:0051246 GO:0051248 GO:0051338 GO:0051348 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0071704 GO:0071840 GO:0071944 GO:0080050 GO:0080090 GO:0090693 GO:0097305 GO:0097306 GO:0097438 GO:0098588 GO:0099402 GO:0140096 GO:1900140 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1901701 GO:1902039 GO:1902456 GO:1903792 GO:1903959 GO:1903960 GO:1905156 GO:1905957 GO:1905958 GO:2000026 GO:2000033 GO:2000034 GO:2000241 GO:2000242 GO:2000692
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 ko04931 map04016 map04075 map04931
Pfam Domains
Protein Families
PP2C

Protein Analysis

179

Amino Acids

19.54

Weight (kDa)

8.93

Isoelectric Point (pI)

42.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PP2C PF00481 128 - 178 1.4e-08 Protein phosphatase 2C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018325)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17545
rosa_chinensis RchiOBHm_Chr2g0140491
rosa_laevigata RLG00000019871
rosa_rugosa Rorug02G0363300
rosa_samantha Rh2AG413800 Rh2AG413900 Rh2BG424000 Rh2CG400200 Rh2CG400300 Rh2DG433700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 498
AciI CCGC 3 cut(s) 155, 496, 498
AclWI GGATC 2 cut(s) 117, 424
AcoI YGGCCR 1 cut(s) 331
AcsI RAATTY 2 cut(s) 65, 321
AcuI CTGAAG 1 cut(s) 374
AfaI GTAC 1 cut(s) 51
AfiI CCNNNNNNNGG 1 cut(s) 356
AflIII ACRYGT 1 cut(s) 296
AgsI TTSAA 2 cut(s) 238, 480
AhlI ACTAGT 1 cut(s) 305
AluBI AGCT 2 cut(s) 17, 222
AluI AGCT 2 cut(s) 17, 222
Alw26I GTCTC 2 cut(s) 305, 401
AlwI GGATC 2 cut(s) 117, 424
AoxI GGCC 1 cut(s) 331
ApoI RAATTY 2 cut(s) 65, 321
BalI TGGCCA 1 cut(s) 333
BccI CCATC 2 cut(s) 323, 376
BceAI ACGGC 1 cut(s) 30
BclI TGATCA 2 cut(s) 265, 526
BcoDI GTCTC 2 cut(s) 305, 401
BcuI ACTAGT 1 cut(s) 305
BfaI CTAG 1 cut(s) 306
BisI GCNGC 1 cut(s) 499
BlsI GCNGC 1 cut(s) 500
BmiI GGNNCC 1 cut(s) 159
BmsI GCATC 1 cut(s) 142
BsaI GGTCTC 1 cut(s) 401
BsaJI CCNNGG 1 cut(s) 496
Bsc4I CCNNNNNNNGG 1 cut(s) 356
BseDI CCNNGG 1 cut(s) 496
BseGI GGATG 1 cut(s) 387
BseLI CCNNNNNNNGG 1 cut(s) 356
BseMII CTCAG 1 cut(s) 396
Bsh1236I CGCG 1 cut(s) 498
BshFI GGCC 1 cut(s) 333
BslI CCNNNNNNNGG 1 cut(s) 356
BsmAI GTCTC 2 cut(s) 305, 401
BsmI GAATGC 1 cut(s) 258
BsnI GGCC 1 cut(s) 333
Bso31I GGTCTC 1 cut(s) 401
Bsp1407I TGTACA 1 cut(s) 49
Bsp143I GATC 4 cut(s) 109, 265, 416, 526
BspACI CCGC 3 cut(s) 155, 496, 498
BspANI GGCC 1 cut(s) 333
BspCNI CTCAG 1 cut(s) 397
BspFNI CGCG 1 cut(s) 498
BspHI TCATGA 2 cut(s) 193, 268
BspLI GGNNCC 1 cut(s) 159
BspPI GGATC 2 cut(s) 117, 424
BspTNI GGTCTC 1 cut(s) 401
BsrGI TGTACA 1 cut(s) 49
BssECI CCNNGG 1 cut(s) 496
BssMI GATC 4 cut(s) 109, 265, 416, 526
Bst4CI ACNGT 2 cut(s) 412, 470
BstAUI TGTACA 1 cut(s) 49
BstDEI CTNAG 1 cut(s) 405
BstDSI CCRYGG 1 cut(s) 496
BstF5I GGATG 1 cut(s) 387
BstFNI CGCG 1 cut(s) 498
BstKTI GATC 4 cut(s) 112, 268, 419, 529
BstMAI GTCTC 2 cut(s) 305, 401
BstMBI GATC 4 cut(s) 109, 265, 416, 526
BstMWI GCNNNNNNNGC 1 cut(s) 431
BstNSI RCATGY 1 cut(s) 300
BstUI CGCG 1 cut(s) 498
BsuRI GGCC 1 cut(s) 333
BtgI CCRYGG 1 cut(s) 496
BtsCI GGATG 1 cut(s) 387
CciI TCATGA 2 cut(s) 193, 268
Cfr42I CCGCGG 1 cut(s) 499
CseI GACGC 1 cut(s) 93
Csp6I GTAC 1 cut(s) 50
CspCI CAANNNNNGTGG 4 cut(s) 79, 114, 454, 489
CviAII CATG 5 cut(s) 113, 194, 269, 297, 511
CviJI RGCY 5 cut(s) 17, 45, 222, 333, 395
CviKI_1 RGCY 5 cut(s) 17, 45, 222, 333, 395
CviQI GTAC 1 cut(s) 50
DdeI CTNAG 1 cut(s) 405
DpnI GATC 4 cut(s) 111, 267, 418, 528
DpnII GATC 4 cut(s) 109, 265, 416, 526
EaeI YGGCCR 1 cut(s) 331
Eco31I GGTCTC 1 cut(s) 401
Eco57I CTGAAG 1 cut(s) 374
FaeI CATG 5 cut(s) 116, 197, 272, 300, 514
FalI AAGNNNNNCTT 2 cut(s) 206, 238
FatI CATG 5 cut(s) 112, 193, 268, 296, 510
FbaI TGATCA 2 cut(s) 265, 526
Fnu4HI GCNGC 1 cut(s) 499
FokI GGATG 1 cut(s) 394
Fsp4HI GCNGC 1 cut(s) 499
FspBI CTAG 1 cut(s) 306
GluI GCNGC 1 cut(s) 499
HaeIII GGCC 1 cut(s) 333
HgaI GACGC 1 cut(s) 93
Hin1II CATG 5 cut(s) 116, 197, 272, 300, 514
HinfI GANTC 1 cut(s) 506
Hpy166II GTNNAC 2 cut(s) 50, 83
Hpy188I TCNGA 5 cut(s) 251, 320, 373, 416, 531
Hpy188III TCNNGA 4 cut(s) 142, 194, 269, 480
Hpy8I GTNNAC 2 cut(s) 50, 83
Hpy99I CGWCG 1 cut(s) 416
HpyAV CCTTC 2 cut(s) 208, 266
HpyCH4III ACNGT 2 cut(s) 412, 470
HpyCH4IV ACGT 1 cut(s) 131
HpyF10VI GCNNNNNNNGC 1 cut(s) 431
HpyF3I CTNAG 1 cut(s) 405
HpySE526I ACGT 1 cut(s) 131
Hsp92II CATG 5 cut(s) 116, 197, 272, 300, 514
Ksp22I TGATCA 2 cut(s) 265, 526
KspI CCGCGG 1 cut(s) 499
Kzo9I GATC 4 cut(s) 109, 265, 416, 526
LpnPI CCDG 5 cut(s) 155, 342, 363, 377, 417
LweI GCATC 1 cut(s) 142
MaeI CTAG 1 cut(s) 306
MaeII ACGT 1 cut(s) 131
MaeIII GTNAC 1 cut(s) 308
MalI GATC 4 cut(s) 111, 267, 418, 528
MboI GATC 4 cut(s) 109, 265, 416, 526
MboII GAAGA 4 cut(s) 307, 351, 360, 380
MlsI TGGCCA 1 cut(s) 333
MluCI AATT 2 cut(s) 65, 321
MluNI TGGCCA 1 cut(s) 333
MmeI TCCRAC 3 cut(s) 311, 394, 489
MnlI CCTC 2 cut(s) 100, 204
Mox20I TGGCCA 1 cut(s) 333
MscI TGGCCA 1 cut(s) 333
MseI TTAA 1 cut(s) 69
MslI CAYNNNNRTG 1 cut(s) 198
Msp20I TGGCCA 1 cut(s) 333
MspA1I CMGCKG 1 cut(s) 498
Mva1269I GAATGC 1 cut(s) 258
MvnI CGCG 1 cut(s) 498
MwoI GCNNNNNNNGC 1 cut(s) 431
NdeII GATC 4 cut(s) 109, 265, 416, 526
NlaIII CATG 5 cut(s) 116, 197, 272, 300, 514
NlaIV GGNNCC 1 cut(s) 159
NmuCI GTSAC 1 cut(s) 308
NspI RCATGY 1 cut(s) 300
PagI TCATGA 2 cut(s) 193, 268
PciI ACATGT 1 cut(s) 296
PctI GAATGC 1 cut(s) 258
PfeI GAWTC 1 cut(s) 506
PkrI GCNGC 1 cut(s) 500
PscI ACATGT 1 cut(s) 296
PspN4I GGNNCC 1 cut(s) 159
RsaI GTAC 1 cut(s) 51
RsaNI GTAC 1 cut(s) 50
RseI CAYNNNNRTG 1 cut(s) 198
SacII CCGCGG 1 cut(s) 499
SaqAI TTAA 1 cut(s) 69
SatI GCNGC 1 cut(s) 499
Sau3AI GATC 4 cut(s) 109, 265, 416, 526
SetI ASST 5 cut(s) 19, 134, 224, 247, 352
SfaNI GCATC 1 cut(s) 142
Sfr303I CCGCGG 1 cut(s) 499
SgrBI CCGCGG 1 cut(s) 499
SmiMI CAYNNNNRTG 1 cut(s) 198
SpeI ACTAGT 1 cut(s) 305
Sse9I AATT 2 cut(s) 65, 321
SsiI CCGC 3 cut(s) 155, 496, 498
SspMI CTAG 1 cut(s) 306
TaaI ACNGT 2 cut(s) 412, 470
TaiI ACGT 1 cut(s) 134
TasI AATT 2 cut(s) 65, 321
TatI WGTACW 1 cut(s) 49
TauI GCSGC 1 cut(s) 501
TfiI GAWTC 1 cut(s) 506
Tru1I TTAA 1 cut(s) 69
Tru9I TTAA 1 cut(s) 69
TseFI GTSAC 1 cut(s) 308
Tsp45I GTSAC 1 cut(s) 308
TspDTI ATGAA 1 cut(s) 285
XapI RAATTY 2 cut(s) 65, 321
XceI RCATGY 1 cut(s) 300
XspI CTAG 1 cut(s) 306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.