AT1G19870

Protein of unknown function (DUF4005)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
6895009 .. 6898818
3810 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G19870.1

Sequence Viewer

Length: 2385 bp
ATGGGAAGATCTCCAGCTTCTTCTTGTCTCCGTCTCATCTCTTGCTCCGGCGGTGATGATACCTCCGCCGATCCTAACTCCACCGCCCTCGAGAACAAGAGCTCTGGGGATAAGCGTGGATGGAGTTTCAGGAAGAAATCTGGGAAACAGCGAGGGTTGATTACTAGTGTAGTTTCTGAAACTACTCCTGCTTCTAGGACTAGAGAGACTCTTGAATCTGCTCTCCTTAAATCTCCGTCTCCTGATAATAACAATGTTTCTGAAAAACAGCAGCAGTCTTTCTCTGTTGATGAAAAGAAGAGTCAGTTACCTGTTGTTACCTATGTGGCTGAGCCTGTGGATGAGAAAAAAACACAGTCTGTTATTGAGGAGAAGACGGAGTTGTTGTCAGTGGAGGAACAGATTGACCATAGAACTGAGGTGTCGCCTGTTATTGTGGAATCAAAAGGGACTGAAACTGAGGAAGATGATTTGATTGGAACTGAATTGCAAGGACCAAGTGCTGCTGATGCAGCCAAGATAGAGGAAGATGTTACTTCCGAGGTTGAAATGGCTAGTAAGGTTGAGCCGGAAGAATCTGAATCCGATGATGTGATTATAGTTAGAAAAGAAAGTGATGAAAAAGTTGATGAGAAGCTGGATGAGTCTGTTATCGTTGTCATCCAAGCTGCTGTTCGTGGTTTTTTGGCGCGAAGAGAACTTTTAAGGAGCAAGAAAGTTATTAAACTCCAAGCTGCAGTTCGTGGCCACCTGGTTAGGAGTCAGGCCATGGGATCACTGCGTTGTGTCCAAGCTATTGTCAAGATGCAGGCGATGGTTCGTGCTCGTCATTCCACAAAAGATGGTAGCCGTGTTTCAGCAACCTCGGATAAGTCGGAACCAAATGCAGCTGCACAAAAACTTCTAGAAAACAAGTTTGCTAAGCATCTAATGGAGTCAACTCCCAAGACAAAACCTATCAACATTAAATGTGATCCTACAAAACCTAGTTCTGCTTGGAACTGGTTGGAGAGGTGGATGTCTGTTCCAAAACCTGAGAAGACTTCTAAAGCAAATTTGACAACGGAAGAGCAAAATTTGGAAGAAACACAGAATGTTAAAATATCACCTCAAGCTGACTTTGTGAATTCTGACTCAACGGTAGAGAACAAAACTGAAACTGATATGCCAAGCTATGAAGCAAGTAAGGTAGAAGGTCAGAATGTGGAGCTATCTGAGACAGAGAAAATGAGCCAATATGATTCACCAGAAGCATCAGCGGAGGTTTATTATGACTCAATCCAGTCTCAGCCACTTGCTGCTAAACCAGATTCTTTGCTCGAAGAGCCTGAATATGTGGATGGACAGATTAAACATTCTTTGAAGCGTAAGGTTAGCAATCCTTCTTTCATTGCCGCACAGTCGAAGTTTGAGGAACTAACTTCATCTACTGGTTCAAACAAAGCAATGACGCTGTCTTCTAAAGATGATGTTTTGGGTGAAGAAGGCAAAACAGATATAGATTCACCAGACACTACAAACACTATAAAGGATCACTCTTTGGAAGATGTTACTCCAGCTGAGCTTAGTGGATCCGAGTGTGGCACCGAACTCTCTGTAACTTCTTCTCTTGACACACTTGAGAAGAAGTCAGACGCTGAGGGTGCAGAGCCCAGGGTAGAAGCTAAGCTTTTAGAGGATGACACTTTTAAAACAGACCAAGCAGAGTTGATAGAAATTGATGTTAAAGACGCAACGTCAATGGGTACTGTAGAGGACCCTAAGGAGAAAGTTGAGAATGCTAAGGACGAAGTTGAAATTTCAGCGACACATCATGAACCGGTCATTAGTACACCAGATTCCAAAAAGAGACGGGCTGAAGATGAATCAGGGCCTCAAGCTTACGCCTTATCTGAGGGAGCTTTAACTCCGATGACAATCACTGAATCTCAGGCAACACCGGCAAGCCAAGCATCTTCTTCAGTGAAAGCAAGAAAGGGAAAATCCGAAAAGAGTGGTTCAAGCCAAAAGAGGAAAGTTAGCAAGAAAATAACATCAAGCCCGAAACAGGAAATTGGTACCGGTGAGGCTACAGAACAAGAGGAAGGGAAAGAACAGAAAAGCGGGAGAAGAACTTCTTTCGGGTATGATCAAGAAGCAAGAGAAAGCAGCGGAGGCAAGAACTCTCTTCCTCGGTTCATGCAGCCAACACAGTCAGCGAAAGCCAAGGTTCAAGAACATAACTCACCAAGATCAAGCCCTGATCTTCAAGAAAGAGATGTTGTTTCGGCTAAGAAGAGACATTCGTTGCCTGGTGTTACCAATGGGAAACAAGTTTCTCCTAGAATCCAACGGTCTGCGTCTCAAGCACAACAGGGAACAAAGGATAGAAAATGGCAGAGGTGA

Protein Analysis

794

Amino Acids

86.88

Weight (kDa)

5.21

Isoelectric Point (pI)

60.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4005 PF13178 719 - 785 3.1e-08 Protein of unknown function (DUF4005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011221)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 2057
AccB1I GGYRCC 2 cut(s) 1583, 2057
AccII CGCG 1 cut(s) 691
AciI CCGC 7 cut(s) 51, 66, 84, 1259, 1395, 2103, 2151
AclWI GGATC 6 cut(s) 65, 781, 968, 1539, 1566, 1579
AcoI YGGCCR 1 cut(s) 745
AcsI RAATTY 4 cut(s) 1054, 1075, 1126, 1797
AcuI CTGAAG 2 cut(s) 1878, 1944
AfaI GTAC 3 cut(s) 1747, 1831, 2059
AfiI CCNNNNNNNGG 1 cut(s) 2047
AgeI ACCGGT 2 cut(s) 1819, 2060
AgsI TTSAA 8 cut(s) 215, 548, 1363, 1437, 1796, 2001, 2213, 2249
AhdI GACNNNNNGTC 1 cut(s) 1735
AhlI ACTAGT 1 cut(s) 164
AjnI CCWGG 3 cut(s) 750, 1652, 2290
AjuI GAANNNNNNNTTGG 4 cut(s) 657, 689, 723, 755
Alw21I GWGCWC 2 cut(s) 104, 826
Alw26I GTCTC 9 cut(s) 32, 38, 200, 243, 1211, 1290, 1843, 2272, 2346
AlwI GGATC 6 cut(s) 65, 781, 968, 1539, 1566, 1579
AlwNI CAGNNNCTG 1 cut(s) 1637
Ama87I CYCGRG 1 cut(s) 89
AoxI GGCC 3 cut(s) 745, 765, 1871
ApoI RAATTY 4 cut(s) 1054, 1075, 1126, 1797
AsiGI ACCGGT 2 cut(s) 1819, 2060
Asp700I GAANNNNTTC 1 cut(s) 2113
Asp718I GGTACC 1 cut(s) 2057
AspLEI GCGC 1 cut(s) 691
AspS9I GGNCC 3 cut(s) 494, 1756, 1871
AsuHPI GGTGA 7 cut(s) 65, 1098, 1236, 1490, 1497, 2075, 2217
AvaI CYCGRG 1 cut(s) 89
AvaII GGWCC 2 cut(s) 494, 1756
AxyI CCTNAGG 1 cut(s) 1761
BalI TGGCCA 1 cut(s) 747
BamHI GGATCC 1 cut(s) 1571
BanI GGYRCC 2 cut(s) 1583, 2057
BanII GRGCYC 2 cut(s) 104, 1653
BbsI GAAGAC 3 cut(s) 380, 1046, 1449
Bbv12I GWGCWC 2 cut(s) 104, 826
BbvCI CCTCAGC 1 cut(s) 1638
BccI CCATC 4 cut(s) 114, 808, 836, 1334
BceAI ACGGC 1 cut(s) 834
BciT130I CCWGG 3 cut(s) 752, 1654, 2292
BclI TGATCA 1 cut(s) 2128
BcoDI GTCTC 9 cut(s) 32, 38, 200, 243, 1211, 1290, 1843, 2272, 2346
BcuI ACTAGT 1 cut(s) 164
BfaI CTAG 7 cut(s) 165, 195, 201, 555, 905, 987, 2322
BfmI CTRYAG 3 cut(s) 735, 1749, 2070
BglII AGATCT 1 cut(s) 8
BlpI GCTNAGC 4 cut(s) 330, 921, 1560, 1665
Bme1390I CCNGG 3 cut(s) 752, 1654, 2292
Bme18I GGWCC 2 cut(s) 494, 1756
BmeRI GACNNNNNGTC 1 cut(s) 1735
BmeT110I CYCGRG 1 cut(s) 89
BmgT120I GGNCC 3 cut(s) 494, 1756, 1871
BmiI GGNNCC 5 cut(s) 879, 1573, 1585, 1758, 2059
BmrFI CCNGG 3 cut(s) 752, 1654, 2292
BmsI GCATC 5 cut(s) 499, 795, 934, 1262, 1961
BpiI GAAGAC 3 cut(s) 380, 1046, 1449
BpmI CTGGAG 1 cut(s) 1539
Bpu10I CCTNAGC 2 cut(s) 1638, 1782
Bpu1102I GCTNAGC 4 cut(s) 330, 921, 1560, 1665
BpuEI CTTGAG 4 cut(s) 1095, 1640, 1860, 2328
BsaBI GATNNNNATC 1 cut(s) 1916
BsaJI CCNNGG 7 cut(s) 540, 768, 864, 1652, 1653, 2171, 2205
BsaWI WCCGGW 2 cut(s) 1819, 2060
BsaXI ACNNNNNCTCC 2 cut(s) 371, 401
Bsc4I CCNNNNNNNGG 1 cut(s) 2047
Bse118I RCCGGY 3 cut(s) 1819, 1939, 2060
Bse1I ACTGG 3 cut(s) 1007, 1282, 1435
Bse21I CCTNAGG 1 cut(s) 1761
Bse3DI GCAATG 2 cut(s) 1389, 1452
Bse8I GATNNNNATC 1 cut(s) 1916
BseBI CCWGG 3 cut(s) 752, 1654, 2292
BseDI CCNNGG 7 cut(s) 540, 768, 864, 1652, 1653, 2171, 2205
BseGI GGATG 7 cut(s) 125, 346, 646, 660, 1023, 1345, 1684
BseJI GATNNNNATC 1 cut(s) 1916
BseLI CCNNNNNNNGG 1 cut(s) 2047
BseMI GCAATG 2 cut(s) 1389, 1452
BseNI ACTGG 3 cut(s) 1007, 1282, 1435
BseRI GAGGAG 1 cut(s) 383
BsgI GTGCAG 2 cut(s) 876, 1665
Bsh1236I CGCG 1 cut(s) 691
BshFI GGCC 3 cut(s) 747, 767, 1873
BshNI GGYRCC 2 cut(s) 1583, 2057
BshTI ACCGGT 2 cut(s) 1819, 2060
BsiHKAI GWGCWC 2 cut(s) 104, 826
BsiHKCI CYCGRG 1 cut(s) 89
BsiSI CCGG 5 cut(s) 48, 569, 1820, 1940, 2061
BslFI GGGAC 1 cut(s) 463
BslI CCNNNNNNNGG 1 cut(s) 2047
BsmAI GTCTC 9 cut(s) 32, 38, 200, 243, 1211, 1290, 1843, 2272, 2346
BsmBI CGTCTC 4 cut(s) 38, 243, 1843, 2346
BsmFI GGGAC 1 cut(s) 463
BsmI GAATGC 1 cut(s) 1783
BsnI GGCC 3 cut(s) 747, 767, 1873
BsoBI CYCGRG 1 cut(s) 89
Bsp1286I GDGCHC 3 cut(s) 104, 826, 1653
Bsp143I GATC 9 cut(s) 8, 70, 773, 973, 1531, 1571, 2128, 2231, 2242
Bsp1720I GCTNAGC 4 cut(s) 330, 921, 1560, 1665
Bsp19I CCATGG 1 cut(s) 768
BspACI CCGC 7 cut(s) 51, 66, 84, 1259, 1395, 2103, 2151
BspANI GGCC 3 cut(s) 747, 767, 1873
BspFNI CGCG 1 cut(s) 691
BspHI TCATGA 1 cut(s) 1813
BspLI GGNNCC 5 cut(s) 879, 1573, 1585, 1758, 2059
BspMAI CTGCAG 1 cut(s) 739
BspPI GGATC 6 cut(s) 65, 781, 968, 1539, 1566, 1579
BspQI GCTCTTC 2 cut(s) 1062, 1317
BspT107I GGYRCC 2 cut(s) 1583, 2057
BsrDI GCAATG 2 cut(s) 1389, 1452
BsrFI RCCGGY 3 cut(s) 1819, 1939, 2060
BsrI ACTGG 3 cut(s) 1007, 1282, 1435
BssAI RCCGGY 3 cut(s) 1819, 1939, 2060
BssECI CCNNGG 7 cut(s) 540, 768, 864, 1652, 1653, 2171, 2205
BssMI GATC 9 cut(s) 8, 70, 773, 973, 1531, 1571, 2128, 2231, 2242
BssT1I CCWWGG 2 cut(s) 768, 2205
Bst2UI CCWGG 3 cut(s) 752, 1654, 2292
Bst4CI ACNGT 6 cut(s) 357, 1141, 1401, 1750, 2193, 2334
Bst6I CTCTTC 6 cut(s) 293, 688, 1062, 1317, 2172, 2270
BstC8I GCNNGC 2 cut(s) 810, 1945
BstDSI CCRYGG 1 cut(s) 768
BstF5I GGATG 7 cut(s) 125, 346, 646, 660, 1023, 1345, 1684
BstFNI CGCG 1 cut(s) 691
BstHHI GCGC 1 cut(s) 691
BstKTI GATC 9 cut(s) 11, 73, 776, 976, 1534, 1574, 2131, 2234, 2245
BstMAI GTCTC 9 cut(s) 32, 38, 200, 243, 1211, 1290, 1843, 2272, 2346
BstMBI GATC 9 cut(s) 8, 70, 773, 973, 1531, 1571, 2128, 2231, 2242
BstMWI GCNNNNNNNGC 8 cut(s) 509, 512, 1324, 1643, 1940, 1949, 2154, 2345
BstNI CCWGG 3 cut(s) 752, 1654, 2292
BstSCI CCNGG 3 cut(s) 750, 1652, 2290
BstSFI CTRYAG 3 cut(s) 735, 1749, 2070
BstUI CGCG 1 cut(s) 691
BstV2I GAAGAC 3 cut(s) 380, 1046, 1449
BstX2I RGATCY 2 cut(s) 8, 1571
BstYI RGATCY 2 cut(s) 8, 1571
Bsu36I CCTNAGG 1 cut(s) 1761
BsuRI GGCC 3 cut(s) 747, 767, 1873
BtgI CCRYGG 1 cut(s) 768
BtgZI GCGATG 1 cut(s) 827
BtsCI GGATG 7 cut(s) 125, 346, 646, 660, 1023, 1345, 1684
BtsI GCAGTG 1 cut(s) 776
BtsIMutI CAGTG 4 cut(s) 396, 776, 1920, 1968
Cac8I GCNNGC 2 cut(s) 810, 1945
CaiI CAGNNNCTG 1 cut(s) 1637
CciI TCATGA 1 cut(s) 1813
CfoI GCGC 1 cut(s) 691
Cfr10I RCCGGY 3 cut(s) 1819, 1939, 2060
Cfr13I GGNCC 3 cut(s) 494, 1756, 1871
CseI GACGC 4 cut(s) 1459, 1643, 1739, 2328
CsiI ACCWGGT 1 cut(s) 750
Csp6I GTAC 3 cut(s) 1746, 1830, 2058
CspAI ACCGGT 2 cut(s) 1819, 2060
CviAII CATG 3 cut(s) 769, 1814, 2179
CviQI GTAC 3 cut(s) 1746, 1830, 2058
DpnI GATC 9 cut(s) 10, 72, 775, 975, 1533, 1573, 2130, 2233, 2244
DpnII GATC 9 cut(s) 8, 70, 773, 973, 1531, 1571, 2128, 2231, 2242
DraI TTTAAA 1 cut(s) 1690
DriI GACNNNNNGTC 1 cut(s) 1735
EaeI YGGCCR 1 cut(s) 745
Eam1104I CTCTTC 6 cut(s) 293, 688, 1062, 1317, 2172, 2270
Eam1105I GACNNNNNGTC 1 cut(s) 1735
EarI CTCTTC 6 cut(s) 293, 688, 1062, 1317, 2172, 2270
EciI GGCGGA 1 cut(s) 55
Ecl136II GAGCTC 1 cut(s) 102
Eco130I CCWWGG 2 cut(s) 768, 2205
Eco24I GRGCYC 2 cut(s) 104, 1653
Eco47I GGWCC 2 cut(s) 494, 1756
Eco53kI GAGCTC 1 cut(s) 102
Eco57I CTGAAG 2 cut(s) 1878, 1944
Eco81I CCTNAGG 1 cut(s) 1761
Eco88I CYCGRG 1 cut(s) 89
EcoICRI GAGCTC 1 cut(s) 102
EcoO109I RGGNCCY 2 cut(s) 1756, 1871
EcoRI GAATTC 1 cut(s) 1126
EcoRII CCWGG 3 cut(s) 750, 1652, 2290
EcoT14I CCWWGG 2 cut(s) 768, 2205
EcoT38I GRGCYC 2 cut(s) 104, 1653
ErhI CCWWGG 2 cut(s) 768, 2205
Esp3I CGTCTC 4 cut(s) 38, 243, 1843, 2346
FaeI CATG 3 cut(s) 772, 1817, 2182
FalI AAGNNNNNCTT 4 cut(s) 1653, 1685, 2101, 2133
FaqI GGGAC 1 cut(s) 463
FatI CATG 3 cut(s) 768, 1813, 2178
FauI CCCGC 1 cut(s) 2096
FbaI TGATCA 1 cut(s) 2128
FokI GGATG 7 cut(s) 132, 353, 647, 653, 1030, 1352, 1691
FriOI GRGCYC 2 cut(s) 104, 1653
FspBI CTAG 7 cut(s) 165, 195, 201, 555, 905, 987, 2322
GlaI GCGC 1 cut(s) 690
GsuI CTGGAG 1 cut(s) 1539
HaeIII GGCC 3 cut(s) 747, 767, 1873
HapII CCGG 5 cut(s) 48, 569, 1820, 1940, 2061
HgaI GACGC 4 cut(s) 1459, 1643, 1739, 2328
HhaI GCGC 1 cut(s) 691
Hin1II CATG 3 cut(s) 772, 1817, 2182
Hin6I GCGC 1 cut(s) 689
HinP1I GCGC 1 cut(s) 689
HincII GTYRAC 1 cut(s) 939
HindII GTYRAC 1 cut(s) 939
HindIII AAGCTT 2 cut(s) 1667, 1878
HpaII CCGG 5 cut(s) 48, 569, 1820, 1940, 2061
HphI GGTGA 7 cut(s) 65, 1098, 1236, 1490, 1497, 2075, 2217
Hpy166II GTNNAC 2 cut(s) 939, 1832
Hpy8I GTNNAC 2 cut(s) 939, 1832
HpyAV CCTTC 4 cut(s) 1187, 1392, 1478, 2078
HpyCH4III ACNGT 6 cut(s) 357, 1141, 1401, 1750, 2193, 2334
HpyCH4IV ACGT 1 cut(s) 1736
HpyCH4V TGCA 8 cut(s) 490, 512, 737, 808, 887, 893, 1646, 2182
HpyF10VI GCNNNNNNNGC 8 cut(s) 509, 512, 1324, 1643, 1940, 1949, 2154, 2345
HpySE526I ACGT 1 cut(s) 1736
Hsp92II CATG 3 cut(s) 772, 1817, 2182
HspAI GCGC 1 cut(s) 689
KpnI GGTACC 1 cut(s) 2061
Ksp22I TGATCA 1 cut(s) 2128
Kzo9I GATC 9 cut(s) 8, 70, 773, 973, 1531, 1571, 2128, 2231, 2242
LguI GCTCTTC 2 cut(s) 1062, 1317
LmnI GCTCC 4 cut(s) 50, 708, 1207, 1898
LweI GCATC 5 cut(s) 499, 795, 934, 1262, 1961
MabI ACCWGGT 1 cut(s) 750
MaeI CTAG 7 cut(s) 165, 195, 201, 555, 905, 987, 2322
MaeII ACGT 1 cut(s) 1736
MaeIII GTNAC 6 cut(s) 306, 316, 532, 1549, 1597, 2296
MalI GATC 9 cut(s) 10, 72, 775, 975, 1533, 1573, 2130, 2233, 2244
MboI GATC 9 cut(s) 8, 70, 773, 973, 1531, 1571, 2128, 2231, 2242
MflI RGATCY 2 cut(s) 8, 1571
MhlI GDGCHC 3 cut(s) 104, 826, 1653
MlsI TGGCCA 1 cut(s) 747
MluCI AATT 7 cut(s) 485, 1054, 1075, 1126, 1716, 1797, 2052
MluNI TGGCCA 1 cut(s) 747
MlyI GAGTC 7 cut(s) 202, 310, 653, 769, 944, 1127, 1268
MmeI TCCRAC 3 cut(s) 855, 987, 2353
Mox20I TGGCCA 1 cut(s) 747
MroXI GAANNNNTTC 1 cut(s) 2113
MscI TGGCCA 1 cut(s) 747
MseI TTAA 9 cut(s) 228, 704, 723, 966, 1098, 1350, 1689, 1725, 1904
Msp20I TGGCCA 1 cut(s) 747
MspA1I CMGCKG 4 cut(s) 890, 1259, 1559, 2151
MspI CCGG 5 cut(s) 48, 569, 1820, 1940, 2061
MspR9I CCNGG 3 cut(s) 752, 1654, 2292
Mva1269I GAATGC 1 cut(s) 1783
MvaI CCWGG 3 cut(s) 752, 1654, 2292
MvnI CGCG 1 cut(s) 691
MwoI GCNNNNNNNGC 8 cut(s) 509, 512, 1324, 1643, 1940, 1949, 2154, 2345
NcoI CCATGG 1 cut(s) 768
NdeII GATC 9 cut(s) 8, 70, 773, 973, 1531, 1571, 2128, 2231, 2242
NlaIII CATG 3 cut(s) 772, 1817, 2182
NlaIV GGNNCC 5 cut(s) 879, 1573, 1585, 1758, 2059
PaeR7I CTCGAG 1 cut(s) 89
PagI TCATGA 1 cut(s) 1813
PasI CCCWGGG 1 cut(s) 1653
PciSI GCTCTTC 2 cut(s) 1062, 1317
PctI GAATGC 1 cut(s) 1783
PdmI GAANNNNTTC 1 cut(s) 2113
PflFI GACNNNGTC 1 cut(s) 1453
PinAI ACCGGT 2 cut(s) 1819, 2060
PleI GAGTC 7 cut(s) 202, 309, 652, 768, 943, 1127, 1268
PpsI GAGTC 7 cut(s) 202, 309, 652, 768, 943, 1127, 1268
PpuMI RGGWCCY 1 cut(s) 1756
Psp124BI GAGCTC 1 cut(s) 104
Psp5II RGGWCCY 1 cut(s) 1756
Psp6I CCWGG 3 cut(s) 750, 1652, 2290
PspGI CCWGG 3 cut(s) 750, 1652, 2290
PspN4I GGNNCC 5 cut(s) 879, 1573, 1585, 1758, 2059
PspPI GGNCC 3 cut(s) 494, 1756, 1871
PspPPI RGGWCCY 1 cut(s) 1756
PstI CTGCAG 1 cut(s) 739
PstNI CAGNNNCTG 1 cut(s) 1637
PsuI RGATCY 2 cut(s) 8, 1571
PsyI GACNNNGTC 1 cut(s) 1453
PvuII CAGCTG 2 cut(s) 890, 1559
RsaI GTAC 3 cut(s) 1747, 1831, 2059
RsaNI GTAC 3 cut(s) 1746, 1830, 2058
SacI GAGCTC 1 cut(s) 104
SapI GCTCTTC 2 cut(s) 1062, 1317
SaqAI TTAA 9 cut(s) 228, 704, 723, 966, 1098, 1350, 1689, 1725, 1904
Sau3AI GATC 9 cut(s) 8, 70, 773, 973, 1531, 1571, 2128, 2231, 2242
Sau96I GGNCC 3 cut(s) 494, 1756, 1871
SchI GAGTC 7 cut(s) 202, 310, 653, 769, 944, 1127, 1268
ScrFI CCNGG 3 cut(s) 752, 1654, 2292
SduI GDGCHC 3 cut(s) 104, 826, 1653
SexAI ACCWGGT 1 cut(s) 750
SfaNI GCATC 5 cut(s) 499, 795, 934, 1262, 1961
SfcI CTRYAG 3 cut(s) 735, 1749, 2070
Sfr274I CTCGAG 1 cut(s) 89
SinI GGWCC 2 cut(s) 494, 1756
SlaI CTCGAG 1 cut(s) 89
SmlI CTYRAG 5 cut(s) 89, 1110, 1619, 1875, 2343
SmoI CTYRAG 5 cut(s) 89, 1110, 1619, 1875, 2343
SpeI ACTAGT 1 cut(s) 164
Sse9I AATT 7 cut(s) 485, 1054, 1075, 1126, 1716, 1797, 2052
SsiI CCGC 7 cut(s) 51, 66, 84, 1259, 1395, 2103, 2151
SspMI CTAG 7 cut(s) 165, 195, 201, 555, 905, 987, 2322
SstI GAGCTC 1 cut(s) 104
StyD4I CCNGG 3 cut(s) 750, 1652, 2290
StyI CCWWGG 2 cut(s) 768, 2205
TaaI ACNGT 6 cut(s) 357, 1141, 1401, 1750, 2193, 2334
TaiI ACGT 1 cut(s) 1739
TaqI TCGA 3 cut(s) 90, 1320, 1403
TasI AATT 7 cut(s) 485, 1054, 1075, 1126, 1716, 1797, 2052
TatI WGTACW 1 cut(s) 1829
TauI GCSGC 1 cut(s) 1397
Tru1I TTAA 9 cut(s) 228, 704, 723, 966, 1098, 1350, 1689, 1725, 1904
Tru9I TTAA 9 cut(s) 228, 704, 723, 966, 1098, 1350, 1689, 1725, 1904
TscAI CASTG 4 cut(s) 396, 783, 1927, 1968
TspDTI ATGAA 8 cut(s) 306, 633, 1191, 1378, 1413, 1830, 1878, 2167
TspGWI ACGGA 4 cut(s) 20, 225, 392, 1079
TspRI CASTG 4 cut(s) 396, 783, 1927, 1968
Tth111I GACNNNGTC 1 cut(s) 1453
VpaK11BI GGWCC 2 cut(s) 494, 1756
XapI RAATTY 4 cut(s) 1054, 1075, 1126, 1797
XbaI TCTAGA 1 cut(s) 904
XhoI CTCGAG 1 cut(s) 89
XmnI GAANNNNTTC 1 cut(s) 2113
XspI CTAG 7 cut(s) 165, 195, 201, 555, 905, 987, 2322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.