Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0011221

Physical Location & Seq

Genomic Coordinates Reverse (-)

1074201 .. 1079099

Gene Structure 4899 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g01380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3063 bp

ATGAAGAAAATGGGGAAATCCACCTCTTGCTTCAAAATTATCTCCTGCGGTAAGGATTCAGCGGACAACGATGATCTCGAAGCTCCTGAGAGCAAGAGTCCGAGTGACAAGCGCGGATGGAGTTTCCGAAAGAGAGCTGCGCGGCATCGAGTGTTGAGCAACACTGTCATCACAGAGACCCCCACTTCCGGGCATAAGGAGAGCCCGGAATCAGCAAGCGCTACTGATCCAGAAAAGATACCGTTAATACATTGCAGTGATGAGAAACCCCAGTTGGTAACTCCTGAGAACCCAAAAGTATCTGAGACTGAACAGAAGGTATCCCAGACTGAACCAAAAGTACATGAGACTGAACCGAACGTACCTGAAGCTGAACAGAAAGCACCGGAGACTGAACCGAACGTACCAGAAGTTGAAGGGAAAGCATCGGAGACTGAACCGAAAGTACCTGAGACTGAACAGAAGGTATCCCAAACTGAACCAAAAATACCTGAGACTGAACCCGAATCTGAACAGAAAGCACCGGAGACTGAACCGAACGTACCAGAAGCTGAAAGGAAAGCACCGGAGACTGAACTGAATGTACCAGAAGCTGAAGGGAAAGCACCGGAGACTGAACCGAAAGTACCTGAGACAGAACCGAACGTACCCGTCACTGAACCCAAAGTACCCGAGACTGAACCCAAAGTCTCTAATACTGAAAATGTCACAGAAGATGAAAGTGCAGTCAAATGCAAATCGGATGAGTACGATGTTATTGTTGTGCAGACAGCTTCTAGAGGATTGCTGGATCAGAAATCGTTCATGGAGCTTGAGAATGTTGTTAAGTTGCAAGCTACTGTTCGTGGGCATTTGGTCCGTAGGCAAGCCGTGGGAACTTTACGATGTGTTCAAGCTCTTGTGAAAATGCAAGCTCTTGTTCGTGCTCGCCGTGCTCGTCAGGAGATAGACCGTAACTCTAAGATCTCGGAGAAGGCCAAATCGAATATAACATACACTTCAATTGACAAGCTAGTTAGCAATAGTTTTGCCTGCCGGTTGTTGGAATCATCACCGAAGACCAAACCTATGCATGCCAAGTGTGATTCCTCTAATCCCGGCTCTTTTTGGGAATGGATGGAGAGATGGACGTCACTTTCATCACCGTCAACGGAGGATATTGCAGAGTCGGAAAAAGCAGTGGCAGCAATAAAGAAACAGGAAAGAAGAATGGAAGAAATTTCTGAATCCCCTCAGGAACCTAAAATTCAAGATGAAGTTCTTTGTGAGATATCAGATTCAAAGTCCAACATCACGGAATCAATAGTGCCATCTGAAAGTGAAGAGAATCCGATTACTTATGACGCTGACAACTTGAACTTTCAAGCAAGCCATTCTGATATTGACGCTGACAACTTGAACTTTCAGGCAAGCCATTCTGATATTGAACAGCCTCAGTTGGAGAACAACAGTAGATCTGATGTGAAAGAGATTACGGAAGAGATCAATTATCTTCCAAATCAAAGTGTGCAATCAAATGCAGAGGTGGAGCTCAAGTCCTTTTCTGGGAACCCTGTCACGGAAATAAGAAAGGAAGAAATTTCTGAGTCCCTTCGGGAATCTAACATTCAAGATGAAGTTCTTTGTGAGATACCAGACTTAAAGTCCAGCATCACGGAACCAATAGTGCCATCTGAAAGTGAAGAGAATCTGATTAGTTATGACGCTGACAACTTGAACTTTCAGGCAAGCCATTCTAACAGTGAACAGCCTCAGTTGGAGAACAACAGTACTTCTGATGTGAAAGAGATCAGGGAAGAGATAAATTATCTTCCAAATCAAAGTGTGCGATCAAATGCAGATTCTCAAGTGGAGCTCAAGTCCTTTTCTGGGAACCCTGTCACAGAAACTGAACAACCTAAACGTTCTATGAAAAGATTAGCCTCAGAAGAACTAGAAACCGAAGGAAAGAAATCTGTATTTGGATCAGGGAAAGTGAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTTGAAGTGCTGAGTTCAACTCCCCATTCAGGTAGTTCGATTAGTCCATCTCATCAAGATGATGCTGCAAATGAATTACGAAGGGACACATTCTCATCTGCAGTGGATACTGAAATCAGAAAGGAGCTCAACGTAGCAGAAAACCCAGTCACCCATGGATCAAGTGTTCAAGTTGGTGGATCTGAGTGTGGCACCGAAATGGGTGGCACTGAAATCTCCATTTCTTCCACCCTTGATTCGCCTAACAGATCTGATGTTGGAGCTACGGAACATGAGCATGGAGCCAAAGTTTCAGTGGAAGGAGATATTTGCAATCCTGACAGCACCGAAAATGTGGATGTCCAAGCCAAAGATTCCCCTACAATCCCAGTCTCCAACTTATCTGATCCAGTCTTGGATCAACCAGAAAAACATGATGTTGTTAATGGTGAGATCGAAAATTCTGTGGTTGCTGTGGACTCCACACAAGCAGAGTCTCAGCCAGAGAGAACTGAGTCTGATCTGCAGAGAGAACAGGACCCTGAGGCAGGTATTCAAGCATATGCATCACCCCCAGAAGCTTCTCCAAGGAGCCATTTGGCTGTCCCAGAATCCCAAGGAACACCGTCTAGTCTGATATCCGTGAAAGCTAAAAGGAGCAAAGCTGATAAGAGTGGATCCAACCAAAAGCGCAAGTCTGCGTCAGCAGGAAAGAATTCGCCCTCTAACCCAAACCAAGATTCTGGATCAAATAAAGATCAGAAAAAGGGGAAGAGACGCAATTCATTTGGTTCAGAAAAACCCGCCGCTGATAAGATTGATCAAGAACCAAGACATAGCAGTAGTAATAGTTCCATCCCCCATTTCATGCAAGCCACAGAATCTGCAAGAGCAAAACTTCAAACAAATACCTCTCCAAGATCGAGTCCAGATATGCAAGACAGAGACATTAACATAAAGAAGAGACATTCCTTACCTGGTACAAACGGAAGGCAGGGGTCTCCACGCATCCAGCAGTCAACGGCTCAAGCACAGCCGGGTGCAAAGACAAATGAGAGGAAATGGAACAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005856 GO:0005875 GO:0005886 GO:0008150 GO:0009507 GO:0009526 GO:0009536 GO:0009719 GO:0009725 GO:0009737 GO:0009941 GO:0010033 GO:0015630 GO:0016020 GO:0031967 GO:0031975 GO:0032991 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4005 IQ

Protein Analysis

1021

Amino Acids

111.94

Weight (kDa)

4.92

Isoelectric Point (pI)

67.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4005	PF13178	939 - 1001	7e-07	Protein of unknown function (DUF4005)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19870 AT1G19870
fragaria_vesca	FvH4_2g38820 FvH4_2g38820 FvH4_2g38820
malus_domestica	MD08G1015800.v1.1 MD15G1014800.v1.1
prunus_persica	Prupe.1G369000_v2.0.a1
pyrus_communis	pycom08g01380
rosa_chinensis	RchiOBHm_Chr6g0302451
rosa_laevigata	RLG00000011170
rosa_multiflora	Rmu_sc0011021.1_g000014
rosa_roxburghii	Rroxscaffold_7G00165760
rosa_rugosa	Rorug06G0314400 Rorug06G0314400
rosa_samantha	Rh6AG427400 Rh6BG475300 Rh6CG439500 Rh6DG426500
rosa_wichuraiana	Rw6G036970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1133
Acc36I	ACCTGC	1 cut(s)	2528
AccB1I	GGYRCC	1 cut(s)	2201
AccII	CGCG	2 cut(s)	114, 142
AciI	CCGC	6 cut(s)	48, 62, 114, 142, 2793, 2796
AclI	AACGTT	1 cut(s)	1903
AcsI	RAATTY	6 cut(s)	1218, 1245, 1578, 2009, 2449, 2704
AcuI	CTGAAG	2 cut(s)	387, 615
AcyI	GRCGYC	1 cut(s)	1130
AfeI	AGCGCT	1 cut(s)	220
AfiI	CCNNNNNNNGG	8 cut(s)	188, 189, 1042, 1545, 1558, 1869, 2039, 2537
AhdI	GACNNNNNGTC	1 cut(s)	1642
AjnI	CCWGG	1 cut(s)	2965
AjuI	GAANNNNNNNTTGG	4 cut(s)	257, 289, 2713, 2745
AloI	GAACNNNNNNTCC	2 cut(s)	2160, 2192
Alw21I	GWGCWC	5 cut(s)	928, 937, 1533, 1857, 2139
AlwNI	CAGNNNCTG	4 cut(s)	551, 593, 1889, 2873
Ama87I	CYCGRG	1 cut(s)	671
Aor51HI	AGCGCT	1 cut(s)	220
AoxI	GGCC	1 cut(s)	975
ApeKI	GCWGC	4 cut(s)	137, 1184, 1997, 2075
ApoI	RAATTY	6 cut(s)	1218, 1245, 1578, 2009, 2449, 2704
Asp700I	GAANNNNTTC	2 cut(s)	800, 2704
AspLEI	GCGC	4 cut(s)	114, 142, 221, 2682
AspS9I	GGNCC	2 cut(s)	856, 2527
AsuC2I	CCSGG	4 cut(s)	190, 206, 1098, 3027
AsuHPI	GGTGA	5 cut(s)	1044, 1134, 2152, 2450, 2550
AvaI	CYCGRG	1 cut(s)	671
AvaII	GGWCC	2 cut(s)	856, 2527
AxyI	CCTNAGG	2 cut(s)	1233, 2532
BamHI	GGATCC	1 cut(s)	2666
BanI	GGYRCC	1 cut(s)	2201
BanII	GRGCYC	4 cut(s)	206, 1533, 1857, 2139
BbsI	GAAGAC	1 cut(s)	1064
Bbv12I	GWGCWC	5 cut(s)	928, 937, 1533, 1857, 2139
BbvI	GCAGC	4 cut(s)	124, 1196, 1984, 2062
BccI	CCATC	7 cut(s)	111, 1111, 1119, 1318, 1678, 2065, 2852
BceAI	ACGGC	3 cut(s)	854, 915, 3027
BciT130I	CCWGG	1 cut(s)	2967
BciVI	GTATCC	3 cut(s)	331, 478, 2110
BclI	TGATCA	1 cut(s)	2809
BcnI	CCSGG	4 cut(s)	190, 206, 1098, 3027
BfaI	CTAG	4 cut(s)	777, 1013, 1934, 2619
BfmI	CTRYAG	2 cut(s)	2109, 2513
BfoI	RGCGCY	1 cut(s)	222
BfuAI	ACCTGC	1 cut(s)	2528
BfuI	GTATCC	3 cut(s)	331, 478, 2110
BglII	AGATCT	3 cut(s)	963, 1454, 2258
BisI	GCNGC	6 cut(s)	138, 143, 1185, 1998, 2076, 2796
BlsI	GCNGC	6 cut(s)	139, 144, 1186, 1999, 2077, 2797
BmcAI	AGTACT	1 cut(s)	1771
Bme1390I	CCNGG	5 cut(s)	190, 206, 1098, 2967, 3027
Bme18I	GGWCC	2 cut(s)	856, 2527
BmeRI	GACNNNNNGTC	1 cut(s)	1642
BmeT110I	CYCGRG	1 cut(s)	671
BmgT120I	GGNCC	2 cut(s)	856, 2527
BmiI	GGNNCC	9 cut(s)	1239, 1550, 1659, 1874, 2203, 2293, 2529, 2582, 2668
BmrFI	CCNGG	5 cut(s)	190, 206, 1098, 2967, 3027
BmrI	ACTGGG	3 cut(s)	265, 2150, 2372
BmsI	GCATC	6 cut(s)	154, 434, 1659, 2062, 2564, 3006
BmuI	ACTGGG	3 cut(s)	265, 2150, 2372
BpiI	GAAGAC	1 cut(s)	1064
BplI	GAGNNNNNCTC	2 cut(s)	2014, 2046
BpuEI	CTTGAG	5 cut(s)	833, 1517, 1830, 1841, 3000
BpuMI	CCSGG	4 cut(s)	190, 206, 1098, 3027
BsaHI	GRCGYC	1 cut(s)	1130
BsaI	GGTCTC	2 cut(s)	170, 2994
BsaJI	CCNNGG	4 cut(s)	870, 2164, 2576, 2605
BsaWI	WCCGGW	4 cut(s)	385, 523, 565, 607
BsaXI	ACNNNNNCTCC	6 cut(s)	1520, 1550, 1844, 1874, 2283, 2313
Bsc4I	CCNNNNNNNGG	8 cut(s)	188, 189, 1042, 1545, 1558, 1869, 2039, 2537
Bse118I	RCCGGY	1 cut(s)	1035
Bse1I	ACTGG	4 cut(s)	271, 2156, 2378, 2399
Bse21I	CCTNAGG	2 cut(s)	1233, 2532
Bse3DI	GCAATG	1 cut(s)	250
BseBI	CCWGG	1 cut(s)	2967
BseDI	CCNNGG	4 cut(s)	870, 2164, 2576, 2605
BseGI	GGATG	6 cut(s)	122, 748, 1122, 2353, 2844, 2997
BseLI	CCNNNNNNNGG	8 cut(s)	188, 189, 1042, 1545, 1558, 1869, 2039, 2537
BseMI	GCAATG	1 cut(s)	250
BseNI	ACTGG	4 cut(s)	271, 2156, 2378, 2399
BseXI	GCAGC	4 cut(s)	124, 1196, 1984, 2062
BsgI	GTGCAG	3 cut(s)	744, 785, 1983
Bsh1236I	CGCG	2 cut(s)	114, 142
BshFI	GGCC	1 cut(s)	977
BshNI	GGYRCC	1 cut(s)	2201
BsiHKAI	GWGCWC	5 cut(s)	928, 937, 1533, 1857, 2139
BsiHKCI	CYCGRG	1 cut(s)	671
BsiSI	CCGG	9 cut(s)	189, 206, 386, 524, 566, 608, 1036, 1098, 3026
BslFI	GGGAC	3 cut(s)	1573, 2108, 2579
BslI	CCNNNNNNNGG	8 cut(s)	188, 189, 1042, 1545, 1558, 1869, 2039, 2537
BsmBI	CGTCTC	1 cut(s)	2758
BsmFI	GGGAC	3 cut(s)	1573, 2108, 2579
BsnI	GGCC	1 cut(s)	977
Bso31I	GGTCTC	2 cut(s)	170, 2994
BsoBI	CYCGRG	1 cut(s)	671
Bsp1286I	GDGCHC	6 cut(s)	206, 928, 937, 1533, 1857, 2139
Bsp19I	CCATGG	1 cut(s)	2164
BspACI	CCGC	6 cut(s)	48, 62, 114, 142, 2793, 2796
BspANI	GGCC	1 cut(s)	977
BspFNI	CGCG	2 cut(s)	114, 142
BspLI	GGNNCC	9 cut(s)	1239, 1550, 1659, 1874, 2203, 2293, 2529, 2582, 2668
BspMAI	CTGCAG	2 cut(s)	2113, 2517
BspMI	ACCTGC	1 cut(s)	2528
BspT107I	GGYRCC	1 cut(s)	2201
BspTNI	GGTCTC	2 cut(s)	170, 2994
BsrDI	GCAATG	1 cut(s)	250
BsrFI	RCCGGY	1 cut(s)	1035
BsrI	ACTGG	4 cut(s)	271, 2156, 2378, 2399
BssAI	RCCGGY	1 cut(s)	1035
BssECI	CCNNGG	4 cut(s)	870, 2164, 2576, 2605
BssNI	GRCGYC	1 cut(s)	1130
BssT1I	CCWWGG	3 cut(s)	2164, 2576, 2605
Bst2UI	CCWGG	1 cut(s)	2967
Bst6I	CTCTTC	6 cut(s)	1317, 1473, 1677, 1791, 2756, 2945
BstACI	GRCGYC	1 cut(s)	1130
BstAPI	GCANNNNNTGC	1 cut(s)	1994
BstDSI	CCRYGG	2 cut(s)	870, 2164
BstENI	CCTNNNNNAGG	1 cut(s)	2535
BstF5I	GGATG	6 cut(s)	122, 748, 1122, 2353, 2844, 2997
BstFNI	CGCG	2 cut(s)	114, 142
BstH2I	RGCGCY	1 cut(s)	222
BstHHI	GCGC	4 cut(s)	114, 142, 221, 2682
BstMWI	GCNNNNNNNGC	3 cut(s)	932, 1184, 1994
BstNI	CCWGG	1 cut(s)	2967
BstNSI	RCATGY	1 cut(s)	1076
BstSCI	CCNGG	5 cut(s)	188, 204, 1096, 2965, 3025
BstSFI	CTRYAG	2 cut(s)	2109, 2513
BstUI	CGCG	2 cut(s)	114, 142
BstV1I	GCAGC	4 cut(s)	124, 1196, 1984, 2062
BstV2I	GAAGAC	1 cut(s)	1064
BstX2I	RGATCY	5 cut(s)	963, 1454, 2189, 2258, 2666
BstXI	CCANNNNNNTGG	1 cut(s)	2732
BstYI	RGATCY	5 cut(s)	963, 1454, 2189, 2258, 2666
Bsu36I	CCTNAGG	2 cut(s)	1233, 2532
BsuI	GTATCC	3 cut(s)	331, 478, 2110
BsuRI	GGCC	1 cut(s)	977
BtgI	CCRYGG	2 cut(s)	870, 2164
BtsCI	GGATG	6 cut(s)	122, 748, 1122, 2353, 2844, 2997
BtsI	GCAGTG	3 cut(s)	262, 1185, 2118
BtsIMutI	CAGTG	8 cut(s)	162, 262, 654, 1185, 1747, 2118, 2217, 2310
BveI	ACCTGC	1 cut(s)	2528
CaiI	CAGNNNCTG	4 cut(s)	551, 593, 1889, 2873
CfoI	GCGC	4 cut(s)	114, 142, 221, 2682
Cfr10I	RCCGGY	1 cut(s)	1035
Cfr13I	GGNCC	2 cut(s)	856, 2527
CseI	GACGC	5 cut(s)	1352, 1394, 1712, 2679, 2775
CsiI	ACCWGGT	1 cut(s)	2965
CviAII	CATG	8 cut(s)	344, 805, 1073, 2165, 2282, 2288, 2423, 2857
DriI	GACNNNNNGTC	1 cut(s)	1642
Eam1104I	CTCTTC	6 cut(s)	1317, 1473, 1677, 1791, 2756, 2945
Eam1105I	GACNNNNNGTC	1 cut(s)	1642
EarI	CTCTTC	6 cut(s)	1317, 1473, 1677, 1791, 2756, 2945
Ecl136II	GAGCTC	3 cut(s)	1531, 1855, 2137
Eco130I	CCWWGG	3 cut(s)	2164, 2576, 2605
Eco24I	GRGCYC	4 cut(s)	206, 1533, 1857, 2139
Eco31I	GGTCTC	2 cut(s)	170, 2994
Eco32I	GATATC	2 cut(s)	1272, 2628
Eco47I	GGWCC	2 cut(s)	856, 2527
Eco47III	AGCGCT	1 cut(s)	220
Eco53kI	GAGCTC	3 cut(s)	1531, 1855, 2137
Eco57I	CTGAAG	2 cut(s)	387, 615
Eco81I	CCTNAGG	2 cut(s)	1233, 2532
Eco88I	CYCGRG	1 cut(s)	671
EcoICRI	GAGCTC	3 cut(s)	1531, 1855, 2137
EcoNI	CCTNNNNNAGG	1 cut(s)	2535
EcoO109I	RGGNCCY	1 cut(s)	2527
EcoRI	GAATTC	1 cut(s)	2704
EcoRII	CCWGG	1 cut(s)	2965
EcoRV	GATATC	2 cut(s)	1272, 2628
EcoT14I	CCWWGG	3 cut(s)	2164, 2576, 2605
EcoT22I	ATGCAT	2 cut(s)	1074, 2557
EcoT38I	GRGCYC	4 cut(s)	206, 1533, 1857, 2139
ErhI	CCWWGG	3 cut(s)	2164, 2576, 2605
Esp3I	CGTCTC	1 cut(s)	2758
FaeI	CATG	8 cut(s)	347, 808, 1076, 2168, 2285, 2291, 2426, 2860
FaqI	GGGAC	3 cut(s)	1573, 2108, 2579
FatI	CATG	8 cut(s)	343, 804, 1072, 2164, 2281, 2287, 2422, 2856
FauI	CCCGC	1 cut(s)	2800
FauNDI	CATATG	1 cut(s)	2551
FbaI	TGATCA	1 cut(s)	2809
Fnu4HI	GCNGC	6 cut(s)	138, 143, 1185, 1998, 2076, 2796
FokI	GGATG	6 cut(s)	129, 755, 1129, 2360, 2831, 2984
FriOI	GRGCYC	4 cut(s)	206, 1533, 1857, 2139
Fsp4HI	GCNGC	6 cut(s)	138, 143, 1185, 1998, 2076, 2796
FspBI	CTAG	4 cut(s)	777, 1013, 1934, 2619
GlaI	GCGC	4 cut(s)	113, 141, 220, 2681
GluI	GCNGC	6 cut(s)	138, 143, 1185, 1998, 2076, 2796
HaeII	RGCGCY	1 cut(s)	222
HaeIII	GGCC	1 cut(s)	977
HapII	CCGG	9 cut(s)	189, 206, 386, 524, 566, 608, 1036, 1098, 3026
HgaI	GACGC	5 cut(s)	1352, 1394, 1712, 2679, 2775
HhaI	GCGC	4 cut(s)	114, 142, 221, 2682
Hin1I	GRCGYC	1 cut(s)	1130
Hin1II	CATG	8 cut(s)	347, 808, 1076, 2168, 2285, 2291, 2426, 2860
Hin6I	GCGC	4 cut(s)	112, 140, 219, 2680
HinP1I	GCGC	4 cut(s)	112, 140, 219, 2680
HincII	GTYRAC	2 cut(s)	1149, 3009
HindII	GTYRAC	2 cut(s)	1149, 3009
HindIII	AAGCTT	1 cut(s)	2568
HpaII	CCGG	9 cut(s)	189, 206, 386, 524, 566, 608, 1036, 1098, 3026
HphI	GGTGA	5 cut(s)	1044, 1134, 2152, 2450, 2550
Hpy166II	GTNNAC	4 cut(s)	1149, 1745, 2467, 3009
Hpy8I	GTNNAC	4 cut(s)	1149, 1745, 2467, 3009
HpyCH4IV	ACGT	7 cut(s)	360, 402, 540, 645, 1130, 1903, 2142
HpyF10VI	GCNNNNNNNGC	3 cut(s)	932, 1184, 1994
HpySE526I	ACGT	7 cut(s)	360, 402, 540, 645, 1130, 1903, 2142
Hsp92I	GRCGYC	1 cut(s)	1130
Hsp92II	CATG	8 cut(s)	347, 808, 1076, 2168, 2285, 2291, 2426, 2860
HspAI	GCGC	4 cut(s)	112, 140, 219, 2680
Ksp22I	TGATCA	1 cut(s)	2809
LmnI	GCTCC	9 cut(s)	88, 808, 1528, 1852, 2134, 2270, 2291, 2580, 2646
Lsp1109I	GCAGC	4 cut(s)	124, 1196, 1984, 2062
LweI	GCATC	6 cut(s)	154, 434, 1659, 2062, 2564, 3006
MabI	ACCWGGT	1 cut(s)	2965
MaeI	CTAG	4 cut(s)	777, 1013, 1934, 2619
MaeII	ACGT	7 cut(s)	360, 402, 540, 645, 1130, 1903, 2142
MaeIII	GTNAC	9 cut(s)	104, 277, 652, 706, 953, 1131, 1555, 1879, 2158
MfeI	CAATTG	1 cut(s)	1002
MflI	RGATCY	5 cut(s)	963, 1454, 2189, 2258, 2666
MhlI	GDGCHC	6 cut(s)	206, 928, 937, 1533, 1857, 2139
MlyI	GAGTC	7 cut(s)	106, 1175, 1595, 2462, 2492, 2513, 2923
MmeI	TCCRAC	8 cut(s)	1023, 1149, 1311, 1419, 1737, 2248, 2409, 2694
Mph1103I	ATGCAT	2 cut(s)	1074, 2557
MroXI	GAANNNNTTC	2 cut(s)	800, 2704
MseI	TTAA	5 cut(s)	245, 825, 1640, 2433, 2940
MslI	CAYNNNNRTG	4 cut(s)	255, 2067, 2207, 2286
MspA1I	CMGCKG	2 cut(s)	62, 2798
MspI	CCGG	9 cut(s)	189, 206, 386, 524, 566, 608, 1036, 1098, 3026
MspR9I	CCNGG	5 cut(s)	190, 206, 1098, 2967, 3027
MunI	CAATTG	1 cut(s)	1002
MvaI	CCWGG	1 cut(s)	2967
MvnI	CGCG	2 cut(s)	114, 142
MwoI	GCNNNNNNNGC	3 cut(s)	932, 1184, 1994
NciI	CCSGG	4 cut(s)	190, 206, 1098, 3027
NcoI	CCATGG	1 cut(s)	2164
NdeI	CATATG	1 cut(s)	2551
NlaIII	CATG	8 cut(s)	347, 808, 1076, 2168, 2285, 2291, 2426, 2860
NlaIV	GGNNCC	9 cut(s)	1239, 1550, 1659, 1874, 2203, 2293, 2529, 2582, 2668
NmuCI	GTSAC	7 cut(s)	104, 652, 706, 1131, 1555, 1879, 2158
NsiI	ATGCAT	2 cut(s)	1074, 2557
NspI	RCATGY	1 cut(s)	1076
PaeI	GCATGC	1 cut(s)	1076
PcsI	WCGNNNNNNNCGW	3 cut(s)	75, 928, 934
PdmI	GAANNNNTTC	2 cut(s)	800, 2704
PkrI	GCNGC	6 cut(s)	139, 144, 1186, 1999, 2077, 2797
PleI	GAGTC	7 cut(s)	105, 1174, 1594, 2462, 2491, 2512, 2922
PpsI	GAGTC	7 cut(s)	105, 1174, 1594, 2462, 2491, 2512, 2922
PpuMI	RGGWCCY	1 cut(s)	2527
Psp124BI	GAGCTC	3 cut(s)	1533, 1857, 2139
Psp1406I	AACGTT	1 cut(s)	1903
Psp5II	RGGWCCY	1 cut(s)	2527
Psp6I	CCWGG	1 cut(s)	2965
PspGI	CCWGG	1 cut(s)	2965
PspN4I	GGNNCC	9 cut(s)	1239, 1550, 1659, 1874, 2203, 2293, 2529, 2582, 2668
PspPI	GGNCC	2 cut(s)	856, 2527
PspPPI	RGGWCCY	1 cut(s)	2527
PstI	CTGCAG	2 cut(s)	2113, 2517
PstNI	CAGNNNCTG	4 cut(s)	551, 593, 1889, 2873
PsuI	RGATCY	5 cut(s)	963, 1454, 2189, 2258, 2666
RseI	CAYNNNNRTG	4 cut(s)	255, 2067, 2207, 2286
SacI	GAGCTC	3 cut(s)	1533, 1857, 2139
SaqAI	TTAA	5 cut(s)	245, 825, 1640, 2433, 2940
SatI	GCNGC	6 cut(s)	138, 143, 1185, 1998, 2076, 2796
Sau96I	GGNCC	2 cut(s)	856, 2527
ScaI	AGTACT	1 cut(s)	1771
SchI	GAGTC	7 cut(s)	106, 1175, 1595, 2462, 2492, 2513, 2923
ScrFI	CCNGG	5 cut(s)	190, 206, 1098, 2967, 3027
SduI	GDGCHC	6 cut(s)	206, 928, 937, 1533, 1857, 2139
SexAI	ACCWGGT	1 cut(s)	2965
SfaNI	GCATC	6 cut(s)	154, 434, 1659, 2062, 2564, 3006
SfcI	CTRYAG	2 cut(s)	2109, 2513
SinI	GGWCC	2 cut(s)	856, 2527
SmiMI	CAYNNNNRTG	4 cut(s)	255, 2067, 2207, 2286
SmlI	CTYRAG	5 cut(s)	812, 1532, 1845, 1856, 3015
SmoI	CTYRAG	5 cut(s)	812, 1532, 1845, 1856, 3015
SphI	GCATGC	1 cut(s)	1076
SsiI	CCGC	6 cut(s)	48, 62, 114, 142, 2793, 2796
SspMI	CTAG	4 cut(s)	777, 1013, 1934, 2619
SstI	GAGCTC	3 cut(s)	1533, 1857, 2139
StyD4I	CCNGG	5 cut(s)	188, 204, 1096, 2965, 3025
StyI	CCWWGG	3 cut(s)	2164, 2576, 2605
TaiI	ACGT	7 cut(s)	363, 405, 543, 648, 1133, 1906, 2145
TaqI	TCGA	6 cut(s)	78, 148, 983, 2048, 2445, 2912
TatI	WGTACW	2 cut(s)	340, 1769
TauI	GCSGC	2 cut(s)	145, 2798
Tru1I	TTAA	5 cut(s)	245, 825, 1640, 2433, 2940
Tru9I	TTAA	5 cut(s)	245, 825, 1640, 2433, 2940
TscAI	CASTG	8 cut(s)	169, 262, 661, 1185, 1747, 2118, 2224, 2310
TseFI	GTSAC	7 cut(s)	104, 652, 706, 1131, 1555, 1879, 2158
TseI	GCWGC	4 cut(s)	137, 1184, 1997, 2075
Tsp45I	GTSAC	7 cut(s)	104, 652, 706, 1131, 1555, 1879, 2158
TspGWI	ACGGA	9 cut(s)	848, 1166, 1310, 1490, 1574, 1670, 2291, 2620, 2991
TspRI	CASTG	8 cut(s)	169, 262, 661, 1185, 1747, 2118, 2224, 2310
VpaK11BI	GGWCC	2 cut(s)	856, 2527
XagI	CCTNNNNNAGG	1 cut(s)	2535
XapI	RAATTY	6 cut(s)	1218, 1245, 1578, 2009, 2449, 2704
XbaI	TCTAGA	1 cut(s)	776
XceI	RCATGY	1 cut(s)	1076
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2302
XmnI	GAANNNNTTC	2 cut(s)	800, 2704
XspI	CTAG	4 cut(s)	777, 1013, 1934, 2619
ZraI	GACGTC	1 cut(s)	1131
ZrmI	AGTACT	1 cut(s)	1771
Zsp2I	ATGCAT	2 cut(s)	1074, 2557

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.