iq-domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19870 AT1G19870 |
| fragaria_vesca | FvH4_2g38820 FvH4_2g38820 FvH4_2g38820 |
| malus_domestica | MD08G1015800.v1.1 MD15G1014800.v1.1 |
| prunus_persica | Prupe.1G369000_v2.0.a1 |
| pyrus_communis | pycom08g01380 |
| rosa_chinensis | RchiOBHm_Chr6g0302451 |
| rosa_laevigata | RLG00000011170 |
| rosa_multiflora | Rmu_sc0011021.1_g000014 |
| rosa_roxburghii | Rroxscaffold_7G00165760 |
| rosa_rugosa | Rorug06G0314400 Rorug06G0314400 |
| rosa_samantha | Rh6AG427400 Rh6BG475300 Rh6CG439500 Rh6DG426500 |
| rosa_wichuraiana | Rw6G036970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1442 |
| AccII | CGCG | 2 cut(s) | 905, 2220 |
| AciI | CCGC | 4 cut(s) | 39, 53, 652, 2227 |
| AclI | AACGTT | 1 cut(s) | 1141 |
| AclWI | GGATC | 5 cut(s) | 698, 1197, 1210, 1417, 2218 |
| AcoI | YGGCCR | 1 cut(s) | 472 |
| AcsI | RAATTY | 5 cut(s) | 312, 828, 883, 1247, 1675 |
| AcuI | CTGAAG | 5 cut(s) | 162, 345, 548, 1380, 1779 |
| AcvI | CACGTG | 1 cut(s) | 845 |
| AfaI | GTAC | 2 cut(s) | 1030, 1740 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 179, 180, 290, 894 |
| AflIII | ACRYGT | 1 cut(s) | 615 |
| AjnI | CCWGG | 2 cut(s) | 1596, 2188 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 272, 304, 1942, 1974 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1401, 1433 |
| Alw21I | GWGCWC | 1 cut(s) | 553 |
| Alw26I | GTCTC | 9 cut(s) | 760, 843, 987, 1040, 1615, 1699, 1987, 2170, 2241 |
| AlwI | GGATC | 5 cut(s) | 698, 1197, 1210, 1417, 2218 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 203, 2096 |
| AoxI | GGCC | 1 cut(s) | 472 |
| ApeKI | GCWGC | 5 cut(s) | 461, 1006, 1235, 2052, 2055 |
| ApoI | RAATTY | 5 cut(s) | 312, 828, 883, 1247, 1675 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 828 |
| AspLEI | GCGC | 1 cut(s) | 907 |
| AspS9I | GGNCC | 2 cut(s) | 242, 2229 |
| AsuHPI | GGTGA | 6 cut(s) | 107, 154, 216, 1676, 1791, 1895 |
| AsuNHI | GCTAGC | 1 cut(s) | 230 |
| AvaII | GGWCC | 2 cut(s) | 242, 2229 |
| BaeGI | GKGCMC | 1 cut(s) | 2270 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1347, 1380 |
| BalI | TGGCCA | 1 cut(s) | 474 |
| BamHI | GGATCC | 1 cut(s) | 1202 |
| BanI | GGYRCC | 1 cut(s) | 1442 |
| BanII | GRGCYC | 1 cut(s) | 197 |
| BbrPI | CACGTG | 1 cut(s) | 845 |
| Bbv12I | GWGCWC | 1 cut(s) | 553 |
| BbvI | GCAGC | 5 cut(s) | 448, 1018, 1222, 2064, 2067 |
| BccI | CCATC | 2 cut(s) | 865, 1175 |
| BceAI | ACGGC | 1 cut(s) | 149 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 573, 607 |
| BciT130I | CCWGG | 2 cut(s) | 1598, 2190 |
| BciVI | GTATCC | 3 cut(s) | 760, 1348, 1906 |
| BclI | TGATCA | 3 cut(s) | 159, 2023, 2032 |
| BcoDI | GTCTC | 9 cut(s) | 760, 843, 987, 1040, 1615, 1699, 1987, 2170, 2241 |
| BfaI | CTAG | 4 cut(s) | 231, 1281, 1848, 2100 |
| BfmI | CTRYAG | 1 cut(s) | 1923 |
| BfuI | GTATCC | 3 cut(s) | 760, 1348, 1906 |
| BglII | AGATCT | 2 cut(s) | 1154, 1484 |
| BisI | GCNGC | 6 cut(s) | 40, 462, 1007, 1236, 2053, 2056 |
| BlpI | GCTNAGC | 1 cut(s) | 146 |
| BlsI | GCNGC | 6 cut(s) | 41, 463, 1008, 1237, 2054, 2057 |
| Bme1390I | CCNGG | 2 cut(s) | 1598, 2190 |
| Bme18I | GGWCC | 2 cut(s) | 242, 2229 |
| BmgT120I | GGNCC | 2 cut(s) | 242, 2229 |
| BmiI | GGNNCC | 3 cut(s) | 1204, 1444, 1498 |
| BmrFI | CCNGG | 2 cut(s) | 1598, 2190 |
| BmrI | ACTGGG | 2 cut(s) | 1046, 1601 |
| BmsI | GCATC | 5 cut(s) | 145, 319, 931, 1063, 1513 |
| BmtI | GCTAGC | 1 cut(s) | 234 |
| BmuI | ACTGGG | 2 cut(s) | 1046, 1601 |
| BoxI | GACNNNNGTC | 1 cut(s) | 398 |
| BpmI | CTGGAG | 3 cut(s) | 130, 452, 1335 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2244 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 146 |
| BpuEI | CTTGAG | 2 cut(s) | 1287, 1951 |
| BsaAI | YACGTR | 1 cut(s) | 845 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2165 |
| BsaI | GGTCTC | 2 cut(s) | 1040, 1699 |
| BsaJI | CCNNGG | 3 cut(s) | 469, 1405, 1500 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 103, 133, 2110, 2140 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 179, 180, 290, 894 |
| Bse1I | ACTGG | 6 cut(s) | 244, 369, 1026, 1052, 1176, 1607 |
| Bse3DI | GCAATG | 1 cut(s) | 425 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2165 |
| BseBI | CCWGG | 2 cut(s) | 1598, 2190 |
| BseDI | CCNNGG | 3 cut(s) | 469, 1405, 1500 |
| BseGI | GGATG | 4 cut(s) | 373, 753, 880, 1784 |
| BseJI | GATNNNNATC | 1 cut(s) | 2165 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 179, 180, 290, 894 |
| BseMI | GCAATG | 1 cut(s) | 425 |
| BseNI | ACTGG | 6 cut(s) | 244, 369, 1026, 1052, 1176, 1607 |
| BseRI | GAGGAG | 2 cut(s) | 1290, 2205 |
| BseSI | GKGCMC | 1 cut(s) | 2270 |
| BseXI | GCAGC | 5 cut(s) | 448, 1018, 1222, 2064, 2067 |
| BsgI | GTGCAG | 1 cut(s) | 114 |
| Bsh1236I | CGCG | 2 cut(s) | 905, 2220 |
| BshFI | GGCC | 1 cut(s) | 474 |
| BshNI | GGYRCC | 1 cut(s) | 1442 |
| BsiHKAI | GWGCWC | 1 cut(s) | 553 |
| BslFI | GGGAC | 5 cut(s) | 307, 1346, 1805, 1852, 1900 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 179, 180, 290, 894 |
| BsmAI | GTCTC | 9 cut(s) | 760, 843, 987, 1040, 1615, 1699, 1987, 2170, 2241 |
| BsmBI | CGTCTC | 1 cut(s) | 1987 |
| BsmFI | GGGAC | 5 cut(s) | 307, 1346, 1805, 1852, 1900 |
| BsnI | GGCC | 1 cut(s) | 474 |
| Bso31I | GGTCTC | 2 cut(s) | 1040, 1699 |
| Bsp1286I | GDGCHC | 3 cut(s) | 197, 553, 2270 |
| Bsp1407I | TGTACA | 1 cut(s) | 1738 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 146 |
| Bsp19I | CCATGG | 2 cut(s) | 1405, 1500 |
| BspACI | CCGC | 4 cut(s) | 39, 53, 652, 2227 |
| BspANI | GGCC | 1 cut(s) | 474 |
| BspFNI | CGCG | 2 cut(s) | 905, 2220 |
| BspHI | TCATGA | 1 cut(s) | 1954 |
| BspLI | GGNNCC | 3 cut(s) | 1204, 1444, 1498 |
| BspMAI | CTGCAG | 1 cut(s) | 1927 |
| BspOI | GCTAGC | 1 cut(s) | 234 |
| BspPI | GGATC | 5 cut(s) | 698, 1197, 1210, 1417, 2218 |
| BspT107I | GGYRCC | 1 cut(s) | 1442 |
| BspTNI | GGTCTC | 2 cut(s) | 1040, 1699 |
| BsrDI | GCAATG | 1 cut(s) | 425 |
| BsrGI | TGTACA | 1 cut(s) | 1738 |
| BsrI | ACTGG | 6 cut(s) | 244, 369, 1026, 1052, 1176, 1607 |
| BssECI | CCNNGG | 3 cut(s) | 469, 1405, 1500 |
| BssT1I | CCWWGG | 2 cut(s) | 1405, 1500 |
| Bst2UI | CCWGG | 2 cut(s) | 1598, 2190 |
| Bst4CI | ACNGT | 4 cut(s) | 157, 288, 988, 1819 |
| Bst6I | CTCTTC | 3 cut(s) | 567, 1985, 2168 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 142, 1232 |
| BstAUI | TGTACA | 1 cut(s) | 1738 |
| BstBAI | YACGTR | 1 cut(s) | 845 |
| BstC8I | GCNNGC | 9 cut(s) | 232, 459, 492, 537, 652, 656, 967, 1773, 2085 |
| BstDSI | CCRYGG | 3 cut(s) | 469, 1405, 1500 |
| BstF5I | GGATG | 4 cut(s) | 373, 753, 880, 1784 |
| BstFNI | CGCG | 2 cut(s) | 905, 2220 |
| BstHHI | GCGC | 1 cut(s) | 907 |
| BstMAI | GTCTC | 9 cut(s) | 760, 843, 987, 1040, 1615, 1699, 1987, 2170, 2241 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 142, 651, 1232 |
| BstNI | CCWGG | 2 cut(s) | 1598, 2190 |
| BstNSI | RCATGY | 3 cut(s) | 39, 494, 619 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 398 |
| BstSCI | CCNGG | 2 cut(s) | 1596, 2188 |
| BstSFI | CTRYAG | 1 cut(s) | 1923 |
| BstSLI | GKGCMC | 1 cut(s) | 2270 |
| BstUI | CGCG | 2 cut(s) | 905, 2220 |
| BstV1I | GCAGC | 5 cut(s) | 448, 1018, 1222, 2064, 2067 |
| BstX2I | RGATCY | 4 cut(s) | 1154, 1202, 1484, 2210 |
| BstYI | RGATCY | 4 cut(s) | 1154, 1202, 1484, 2210 |
| BsuI | GTATCC | 3 cut(s) | 760, 1348, 1906 |
| BsuRI | GGCC | 1 cut(s) | 474 |
| BtgI | CCRYGG | 3 cut(s) | 469, 1405, 1500 |
| BtsCI | GGATG | 4 cut(s) | 373, 753, 880, 1784 |
| BtsIMutI | CAGTG | 5 cut(s) | 153, 801, 993, 1755, 1866 |
| Cac8I | GCNNGC | 9 cut(s) | 232, 459, 492, 537, 652, 656, 967, 1773, 2085 |
| CaiI | CAGNNNCTG | 2 cut(s) | 203, 2096 |
| CciI | TCATGA | 1 cut(s) | 1954 |
| CfoI | GCGC | 1 cut(s) | 907 |
| Cfr13I | GGNCC | 2 cut(s) | 242, 2229 |
| CseI | GACGC | 2 cut(s) | 2004, 2209 |
| CsiI | ACCWGGT | 1 cut(s) | 2188 |
| Csp6I | GTAC | 2 cut(s) | 1029, 1739 |
| CviQI | GTAC | 2 cut(s) | 1029, 1739 |
| DraI | TTTAAA | 1 cut(s) | 780 |
| EaeI | YGGCCR | 1 cut(s) | 472 |
| Eam1104I | CTCTTC | 3 cut(s) | 567, 1985, 2168 |
| EarI | CTCTTC | 3 cut(s) | 567, 1985, 2168 |
| Eco130I | CCWWGG | 2 cut(s) | 1405, 1500 |
| Eco24I | GRGCYC | 1 cut(s) | 197 |
| Eco31I | GGTCTC | 2 cut(s) | 1040, 1699 |
| Eco47I | GGWCC | 2 cut(s) | 242, 2229 |
| Eco57I | CTGAAG | 5 cut(s) | 162, 345, 548, 1380, 1779 |
| Eco72I | CACGTG | 1 cut(s) | 845 |
| EcoRII | CCWGG | 2 cut(s) | 1596, 2188 |
| EcoT14I | CCWWGG | 2 cut(s) | 1405, 1500 |
| EcoT38I | GRGCYC | 1 cut(s) | 197 |
| ErhI | CCWWGG | 2 cut(s) | 1405, 1500 |
| Esp3I | CGTCTC | 1 cut(s) | 1987 |
| FaqI | GGGAC | 5 cut(s) | 307, 1346, 1805, 1852, 1900 |
| FauI | CCCGC | 1 cut(s) | 659 |
| FbaI | TGATCA | 3 cut(s) | 159, 2023, 2032 |
| Fnu4HI | GCNGC | 6 cut(s) | 40, 462, 1007, 1236, 2053, 2056 |
| FokI | GGATG | 4 cut(s) | 380, 760, 887, 1771 |
| FriOI | GRGCYC | 1 cut(s) | 197 |
| Fsp4HI | GCNGC | 6 cut(s) | 40, 462, 1007, 1236, 2053, 2056 |
| FspBI | CTAG | 4 cut(s) | 231, 1281, 1848, 2100 |
| GlaI | GCGC | 1 cut(s) | 906 |
| GluI | GCNGC | 6 cut(s) | 40, 462, 1007, 1236, 2053, 2056 |
| GsuI | CTGGAG | 3 cut(s) | 130, 452, 1335 |
| HaeIII | GGCC | 1 cut(s) | 474 |
| HgaI | GACGC | 2 cut(s) | 2004, 2209 |
| HhaI | GCGC | 1 cut(s) | 907 |
| Hin6I | GCGC | 1 cut(s) | 905 |
| HinP1I | GCGC | 1 cut(s) | 905 |
| HindIII | AAGCTT | 2 cut(s) | 1098, 2108 |
| HphI | GGTGA | 6 cut(s) | 107, 154, 216, 1676, 1791, 1895 |
| HpyAV | CCTTC | 6 cut(s) | 562, 592, 717, 757, 1854, 2196 |
| HpyCH4III | ACNGT | 4 cut(s) | 157, 288, 988, 1819 |
| HpyCH4IV | ACGT | 4 cut(s) | 103, 844, 1141, 1909 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 142, 651, 1232 |
| HpySE526I | ACGT | 4 cut(s) | 103, 844, 1141, 1909 |
| HspAI | GCGC | 1 cut(s) | 905 |
| Ksp22I | TGATCA | 3 cut(s) | 159, 2023, 2032 |
| LmnI | GCTCC | 4 cut(s) | 433, 1375, 1496, 1504 |
| Lsp1109I | GCAGC | 5 cut(s) | 448, 1018, 1222, 2064, 2067 |
| LweI | GCATC | 5 cut(s) | 145, 319, 931, 1063, 1513 |
| MabI | ACCWGGT | 1 cut(s) | 2188 |
| MaeI | CTAG | 4 cut(s) | 231, 1281, 1848, 2100 |
| MaeII | ACGT | 4 cut(s) | 103, 844, 1141, 1909 |
| MaeIII | GTNAC | 6 cut(s) | 95, 607, 1213, 1508, 1622, 1883 |
| MflI | RGATCY | 4 cut(s) | 1154, 1202, 1484, 2210 |
| MhlI | GDGCHC | 3 cut(s) | 197, 553, 2270 |
| MlsI | TGGCCA | 1 cut(s) | 474 |
| MluCI | AATT | 9 cut(s) | 27, 312, 828, 883, 1247, 1273, 1647, 1675, 1999 |
| MluNI | TGGCCA | 1 cut(s) | 474 |
| MlyI | GAGTC | 6 cut(s) | 289, 380, 845, 1718, 2102, 2146 |
| MmeI | TCCRAC | 4 cut(s) | 478, 717, 996, 1638 |
| Mox20I | TGGCCA | 1 cut(s) | 474 |
| MroXI | GAANNNNTTC | 1 cut(s) | 828 |
| MscI | TGGCCA | 1 cut(s) | 474 |
| MseI | TTAA | 2 cut(s) | 696, 779 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1518, 1983 |
| Msp20I | TGGCCA | 1 cut(s) | 474 |
| MspA1I | CMGCKG | 2 cut(s) | 53, 2227 |
| MspR9I | CCNGG | 2 cut(s) | 1598, 2190 |
| MvaI | CCWGG | 2 cut(s) | 1598, 2190 |
| MvnI | CGCG | 2 cut(s) | 905, 2220 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 142, 651, 1232 |
| NcoI | CCATGG | 2 cut(s) | 1405, 1500 |
| NheI | GCTAGC | 1 cut(s) | 230 |
| NlaIV | GGNNCC | 3 cut(s) | 1204, 1444, 1498 |
| NmuCI | GTSAC | 4 cut(s) | 95, 1213, 1508, 1883 |
| NspI | RCATGY | 3 cut(s) | 39, 494, 619 |
| PaeI | GCATGC | 1 cut(s) | 494 |
| PagI | TCATGA | 1 cut(s) | 1954 |
| PciI | ACATGT | 1 cut(s) | 615 |
| PdmI | GAANNNNTTC | 1 cut(s) | 828 |
| PfoI | TCCNGGA | 1 cut(s) | 1596 |
| PkrI | GCNGC | 6 cut(s) | 41, 463, 1008, 1237, 2054, 2057 |
| PleI | GAGTC | 6 cut(s) | 289, 379, 844, 1717, 2101, 2145 |
| PmaCI | CACGTG | 1 cut(s) | 845 |
| PmlI | CACGTG | 1 cut(s) | 845 |
| PpsI | GAGTC | 6 cut(s) | 289, 379, 844, 1717, 2101, 2145 |
| Ppu21I | YACGTR | 1 cut(s) | 845 |
| PscI | ACATGT | 1 cut(s) | 615 |
| PshAI | GACNNNNGTC | 1 cut(s) | 398 |
| Psp1406I | AACGTT | 1 cut(s) | 1141 |
| Psp6I | CCWGG | 2 cut(s) | 1596, 2188 |
| PspCI | CACGTG | 1 cut(s) | 845 |
| PspGI | CCWGG | 2 cut(s) | 1596, 2188 |
| PspN4I | GGNNCC | 3 cut(s) | 1204, 1444, 1498 |
| PspPI | GGNCC | 2 cut(s) | 242, 2229 |
| PstI | CTGCAG | 1 cut(s) | 1927 |
| PstNI | CAGNNNCTG | 2 cut(s) | 203, 2096 |
| PsuI | RGATCY | 4 cut(s) | 1154, 1202, 1484, 2210 |
| RsaI | GTAC | 2 cut(s) | 1030, 1740 |
| RsaNI | GTAC | 2 cut(s) | 1029, 1739 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1518, 1983 |
| SaqAI | TTAA | 2 cut(s) | 696, 779 |
| SatI | GCNGC | 6 cut(s) | 40, 462, 1007, 1236, 2053, 2056 |
| Sau96I | GGNCC | 2 cut(s) | 242, 2229 |
| SchI | GAGTC | 6 cut(s) | 289, 380, 845, 1718, 2102, 2146 |
| ScrFI | CCNGG | 2 cut(s) | 1598, 2190 |
| SduI | GDGCHC | 3 cut(s) | 197, 553, 2270 |
| SexAI | ACCWGGT | 1 cut(s) | 2188 |
| SfaNI | GCATC | 5 cut(s) | 145, 319, 931, 1063, 1513 |
| SfcI | CTRYAG | 1 cut(s) | 1923 |
| SinI | GGWCC | 2 cut(s) | 242, 2229 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1518, 1983 |
| SmlI | CTYRAG | 2 cut(s) | 1302, 1966 |
| SmoI | CTYRAG | 2 cut(s) | 1302, 1966 |
| SphI | GCATGC | 1 cut(s) | 494 |
| Sse9I | AATT | 9 cut(s) | 27, 312, 828, 883, 1247, 1273, 1647, 1675, 1999 |
| SsiI | CCGC | 4 cut(s) | 39, 53, 652, 2227 |
| SspI | AATATT | 1 cut(s) | 863 |
| SspMI | CTAG | 4 cut(s) | 231, 1281, 1848, 2100 |
| StyD4I | CCNGG | 2 cut(s) | 1596, 2188 |
| StyI | CCWWGG | 2 cut(s) | 1405, 1500 |
| TaaI | ACNGT | 4 cut(s) | 157, 288, 988, 1819 |
| TaiI | ACGT | 4 cut(s) | 106, 847, 1144, 1912 |
| TaqI | TCGA | 7 cut(s) | 69, 139, 593, 1122, 1286, 2012, 2135 |
| TasI | AATT | 9 cut(s) | 27, 312, 828, 883, 1247, 1273, 1647, 1675, 1999 |
| TatI | WGTACW | 2 cut(s) | 1028, 1738 |
| TauI | GCSGC | 1 cut(s) | 42 |
| Tru1I | TTAA | 2 cut(s) | 696, 779 |
| Tru9I | TTAA | 2 cut(s) | 696, 779 |
| TscAI | CASTG | 5 cut(s) | 160, 801, 993, 1762, 1866 |
| TseFI | GTSAC | 4 cut(s) | 95, 1213, 1508, 1883 |
| TseI | GCWGC | 5 cut(s) | 461, 1006, 1235, 2052, 2055 |
| Tsp45I | GTSAC | 4 cut(s) | 95, 1213, 1508, 1883 |
| TspDTI | ATGAA | 7 cut(s) | 680, 891, 1163, 1284, 1773, 1992, 2068 |
| TspGWI | ACGGA | 3 cut(s) | 107, 458, 2285 |
| TspRI | CASTG | 5 cut(s) | 160, 801, 993, 1762, 1866 |
| VpaK11BI | GGWCC | 2 cut(s) | 242, 2229 |
| XapI | RAATTY | 5 cut(s) | 312, 828, 883, 1247, 1675 |
| XceI | RCATGY | 3 cut(s) | 39, 494, 619 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1168 |
| XmnI | GAANNNNTTC | 1 cut(s) | 828 |
| XspI | CTAG | 4 cut(s) | 231, 1281, 1848, 2100 |