zinc finger CCCH domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Aa_trans | PF01490 | 18 - 329 | 3.7e-56 | Transmembrane amino acid transporter protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 291, 1023 |
| Acc36I | ACCTGC | 2 cut(s) | 40, 451 |
| AccB1I | GGYRCC | 1 cut(s) | 894 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 800 |
| AciI | CCGC | 1 cut(s) | 822 |
| AcoI | YGGCCR | 1 cut(s) | 600 |
| AfaI | GTAC | 3 cut(s) | 461, 527, 748 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 222, 522, 800, 865 |
| AflII | CTTAAG | 2 cut(s) | 104, 217 |
| AflIII | ACRYGT | 1 cut(s) | 12 |
| AgsI | TTSAA | 3 cut(s) | 60, 83, 370 |
| AhlI | ACTAGT | 1 cut(s) | 775 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 839, 871 |
| AluBI | AGCT | 8 cut(s) | 56, 92, 184, 199, 342, 479, 730, 881 |
| AluI | AGCT | 8 cut(s) | 56, 92, 184, 199, 342, 479, 730, 881 |
| Alw21I | GWGCWC | 2 cut(s) | 186, 242 |
| Alw26I | GTCTC | 1 cut(s) | 673 |
| Alw44I | GTGCAC | 1 cut(s) | 238 |
| AoxI | GGCC | 3 cut(s) | 513, 600, 653 |
| ApaLI | GTGCAC | 1 cut(s) | 238 |
| ApeKI | GCWGC | 5 cut(s) | 89, 263, 476, 782, 785 |
| AsuHPI | GGTGA | 1 cut(s) | 149 |
| BaeGI | GKGCMC | 1 cut(s) | 242 |
| BalI | TGGCCA | 1 cut(s) | 602 |
| BanI | GGYRCC | 1 cut(s) | 894 |
| BanII | GRGCYC | 1 cut(s) | 186 |
| BbsI | GAAGAC | 2 cut(s) | 558, 895 |
| Bbv12I | GWGCWC | 2 cut(s) | 186, 242 |
| BbvI | GCAGC | 5 cut(s) | 101, 250, 488, 794, 797 |
| BccI | CCATC | 3 cut(s) | 128, 216, 329 |
| BceAI | ACGGC | 1 cut(s) | 908 |
| BcoDI | GTCTC | 1 cut(s) | 673 |
| BcuI | ACTAGT | 1 cut(s) | 775 |
| BfaI | CTAG | 3 cut(s) | 731, 776, 882 |
| BfmI | CTRYAG | 2 cut(s) | 649, 942 |
| BfrI | CTTAAG | 2 cut(s) | 104, 217 |
| BfuAI | ACCTGC | 2 cut(s) | 40, 451 |
| BisI | GCNGC | 5 cut(s) | 90, 264, 477, 783, 786 |
| BlsI | GCNGC | 5 cut(s) | 91, 265, 478, 784, 787 |
| BmiI | GGNNCC | 1 cut(s) | 896 |
| BmrI | ACTGGG | 2 cut(s) | 531, 538 |
| BmsI | GCATC | 2 cut(s) | 394, 623 |
| BmuI | ACTGGG | 2 cut(s) | 531, 538 |
| BoxI | GACNNNNGTC | 1 cut(s) | 593 |
| BpiI | GAAGAC | 2 cut(s) | 558, 895 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 668, 698 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 222, 522, 800, 865 |
| Bse1I | ACTGG | 4 cut(s) | 509, 526, 533, 849 |
| Bse3DI | GCAATG | 2 cut(s) | 72, 414 |
| BseGI | GGATG | 3 cut(s) | 139, 347, 638 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 222, 522, 800, 865 |
| BseMI | GCAATG | 2 cut(s) | 72, 414 |
| BseMII | CTCAG | 1 cut(s) | 209 |
| BseNI | ACTGG | 4 cut(s) | 509, 526, 533, 849 |
| BseRI | GAGGAG | 2 cut(s) | 334, 689 |
| BseSI | GKGCMC | 1 cut(s) | 242 |
| BseXI | GCAGC | 5 cut(s) | 101, 250, 488, 794, 797 |
| BseYI | CCCAGC | 1 cut(s) | 92 |
| BshFI | GGCC | 3 cut(s) | 515, 602, 655 |
| BshNI | GGYRCC | 1 cut(s) | 894 |
| BsiHKAI | GWGCWC | 2 cut(s) | 186, 242 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 222, 522, 800, 865 |
| BsmAI | GTCTC | 1 cut(s) | 673 |
| BsnI | GGCC | 3 cut(s) | 515, 602, 655 |
| Bsp1286I | GDGCHC | 2 cut(s) | 186, 242 |
| Bsp1407I | TGTACA | 1 cut(s) | 459 |
| BspACI | CCGC | 1 cut(s) | 822 |
| BspANI | GGCC | 3 cut(s) | 515, 602, 655 |
| BspCNI | CTCAG | 1 cut(s) | 208 |
| BspHI | TCATGA | 1 cut(s) | 1033 |
| BspLI | GGNNCC | 1 cut(s) | 896 |
| BspMAI | CTGCAG | 1 cut(s) | 653 |
| BspMI | ACCTGC | 2 cut(s) | 40, 451 |
| BspT107I | GGYRCC | 1 cut(s) | 894 |
| BspTI | CTTAAG | 2 cut(s) | 104, 217 |
| BsrDI | GCAATG | 2 cut(s) | 72, 414 |
| BsrGI | TGTACA | 1 cut(s) | 459 |
| BsrI | ACTGG | 4 cut(s) | 509, 526, 533, 849 |
| Bst4CI | ACNGT | 4 cut(s) | 329, 433, 577, 684 |
| BstAFI | CTTAAG | 2 cut(s) | 104, 217 |
| BstAUI | TGTACA | 1 cut(s) | 459 |
| BstC8I | GCNNGC | 1 cut(s) | 653 |
| BstDEI | CTNAG | 2 cut(s) | 195, 719 |
| BstF5I | GGATG | 3 cut(s) | 139, 347, 638 |
| BstMAI | GTCTC | 1 cut(s) | 673 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 246, 255, 371, 380 |
| BstNSI | RCATGY | 1 cut(s) | 16 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 593 |
| BstSFI | CTRYAG | 2 cut(s) | 649, 942 |
| BstSLI | GKGCMC | 1 cut(s) | 242 |
| BstV1I | GCAGC | 5 cut(s) | 101, 250, 488, 794, 797 |
| BstV2I | GAAGAC | 2 cut(s) | 558, 895 |
| BsuRI | GGCC | 3 cut(s) | 515, 602, 655 |
| BtsCI | GGATG | 3 cut(s) | 139, 347, 638 |
| BtsI | GCAGTG | 1 cut(s) | 975 |
| BtsIMutI | CAGTG | 4 cut(s) | 429, 519, 842, 975 |
| BveI | ACCTGC | 2 cut(s) | 40, 451 |
| Cac8I | GCNNGC | 1 cut(s) | 653 |
| CciI | TCATGA | 1 cut(s) | 1033 |
| Csp6I | GTAC | 3 cut(s) | 460, 526, 747 |
| CviAII | CATG | 5 cut(s) | 13, 598, 754, 790, 1034 |
| CviQI | GTAC | 3 cut(s) | 460, 526, 747 |
| DdeI | CTNAG | 2 cut(s) | 195, 719 |
| EaeI | YGGCCR | 1 cut(s) | 600 |
| Ecl136II | GAGCTC | 1 cut(s) | 184 |
| Eco24I | GRGCYC | 1 cut(s) | 186 |
| Eco53kI | GAGCTC | 1 cut(s) | 184 |
| EcoICRI | GAGCTC | 1 cut(s) | 184 |
| EcoT38I | GRGCYC | 1 cut(s) | 186 |
| FaeI | CATG | 5 cut(s) | 16, 601, 757, 793, 1037 |
| FatI | CATG | 5 cut(s) | 12, 597, 753, 789, 1033 |
| FauNDI | CATATG | 1 cut(s) | 661 |
| Fnu4HI | GCNGC | 5 cut(s) | 90, 264, 477, 783, 786 |
| FokI | GGATG | 3 cut(s) | 146, 334, 645 |
| FriOI | GRGCYC | 1 cut(s) | 186 |
| Fsp4HI | GCNGC | 5 cut(s) | 90, 264, 477, 783, 786 |
| FspBI | CTAG | 3 cut(s) | 731, 776, 882 |
| GluI | GCNGC | 5 cut(s) | 90, 264, 477, 783, 786 |
| GsaI | CCCAGC | 1 cut(s) | 96 |
| HaeIII | GGCC | 3 cut(s) | 515, 602, 655 |
| Hin1II | CATG | 5 cut(s) | 16, 601, 757, 793, 1037 |
| HphI | GGTGA | 1 cut(s) | 149 |
| Hpy166II | GTNNAC | 4 cut(s) | 115, 240, 460, 837 |
| Hpy188I | TCNGA | 2 cut(s) | 380, 642 |
| Hpy188III | TCNNGA | 4 cut(s) | 416, 630, 1015, 1034 |
| Hpy8I | GTNNAC | 4 cut(s) | 115, 240, 460, 837 |
| HpyAV | CCTTC | 2 cut(s) | 376, 526 |
| HpyCH4III | ACNGT | 4 cut(s) | 329, 433, 577, 684 |
| HpyCH4V | TGCA | 9 cut(s) | 89, 151, 240, 407, 446, 651, 782, 968, 981 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 246, 255, 371, 380 |
| HpyF3I | CTNAG | 2 cut(s) | 195, 719 |
| Hsp92II | CATG | 5 cut(s) | 16, 601, 757, 793, 1037 |
| LmnI | GCTCC | 4 cut(s) | 204, 347, 380, 824 |
| Lsp1109I | GCAGC | 5 cut(s) | 101, 250, 488, 794, 797 |
| LweI | GCATC | 2 cut(s) | 394, 623 |
| MaeI | CTAG | 3 cut(s) | 731, 776, 882 |
| MaeIII | GTNAC | 6 cut(s) | 15, 137, 280, 323, 500, 540 |
| MboII | GAAGA | 5 cut(s) | 18, 558, 897, 900, 1019 |
| MfeI | CAATTG | 4 cut(s) | 252, 384, 509, 828 |
| MhlI | GDGCHC | 2 cut(s) | 186, 242 |
| MlsI | TGGCCA | 1 cut(s) | 602 |
| MluCI | AATT | 7 cut(s) | 84, 252, 285, 384, 509, 705, 828 |
| MluNI | TGGCCA | 1 cut(s) | 602 |
| MnlI | CCTC | 5 cut(s) | 355, 591, 667, 724, 760 |
| Mox20I | TGGCCA | 1 cut(s) | 602 |
| MscI | TGGCCA | 1 cut(s) | 602 |
| MseI | TTAA | 4 cut(s) | 105, 143, 218, 933 |
| MslI | CAYNNNNRTG | 3 cut(s) | 132, 758, 908 |
| Msp20I | TGGCCA | 1 cut(s) | 602 |
| MspA1I | CMGCKG | 1 cut(s) | 92 |
| MspCI | CTTAAG | 2 cut(s) | 104, 217 |
| MunI | CAATTG | 4 cut(s) | 252, 384, 509, 828 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 246, 255, 371, 380 |
| NdeI | CATATG | 1 cut(s) | 661 |
| NlaIII | CATG | 5 cut(s) | 16, 601, 757, 793, 1037 |
| NlaIV | GGNNCC | 1 cut(s) | 896 |
| NmeAIII | GCCGAG | 1 cut(s) | 938 |
| NmuCI | GTSAC | 3 cut(s) | 137, 280, 540 |
| NspI | RCATGY | 1 cut(s) | 16 |
| PagI | TCATGA | 1 cut(s) | 1033 |
| PciI | ACATGT | 1 cut(s) | 12 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 800 |
| PkrI | GCNGC | 5 cut(s) | 91, 265, 478, 784, 787 |
| PscI | ACATGT | 1 cut(s) | 12 |
| PshAI | GACNNNNGTC | 1 cut(s) | 593 |
| PsiI | TTATAA | 2 cut(s) | 291, 1023 |
| Psp124BI | GAGCTC | 1 cut(s) | 186 |
| PspFI | CCCAGC | 1 cut(s) | 92 |
| PspN4I | GGNNCC | 1 cut(s) | 896 |
| PstI | CTGCAG | 1 cut(s) | 653 |
| PvuII | CAGCTG | 1 cut(s) | 92 |
| RsaI | GTAC | 3 cut(s) | 461, 527, 748 |
| RsaNI | GTAC | 3 cut(s) | 460, 526, 747 |
| RseI | CAYNNNNRTG | 3 cut(s) | 132, 758, 908 |
| SacI | GAGCTC | 1 cut(s) | 186 |
| SaqAI | TTAA | 4 cut(s) | 105, 143, 218, 933 |
| SatI | GCNGC | 5 cut(s) | 90, 264, 477, 783, 786 |
| SduI | GDGCHC | 2 cut(s) | 186, 242 |
| SfaNI | GCATC | 2 cut(s) | 394, 623 |
| SfcI | CTRYAG | 2 cut(s) | 649, 942 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 132, 758, 908 |
| SmlI | CTYRAG | 2 cut(s) | 104, 217 |
| SmoI | CTYRAG | 2 cut(s) | 104, 217 |
| SpeI | ACTAGT | 1 cut(s) | 775 |
| Sse9I | AATT | 7 cut(s) | 84, 252, 285, 384, 509, 705, 828 |
| SsiI | CCGC | 1 cut(s) | 822 |
| SspMI | CTAG | 3 cut(s) | 731, 776, 882 |
| SstI | GAGCTC | 1 cut(s) | 186 |
| TaaI | ACNGT | 4 cut(s) | 329, 433, 577, 684 |
| TaqI | TCGA | 1 cut(s) | 672 |
| TasI | AATT | 7 cut(s) | 84, 252, 285, 384, 509, 705, 828 |
| TatI | WGTACW | 1 cut(s) | 459 |
| Tru1I | TTAA | 4 cut(s) | 105, 143, 218, 933 |
| Tru9I | TTAA | 4 cut(s) | 105, 143, 218, 933 |
| TscAI | CASTG | 4 cut(s) | 436, 526, 849, 975 |
| TseFI | GTSAC | 3 cut(s) | 137, 280, 540 |
| TseI | GCWGC | 5 cut(s) | 89, 263, 476, 782, 785 |
| Tsp45I | GTSAC | 3 cut(s) | 137, 280, 540 |
| TspDTI | ATGAA | 2 cut(s) | 708, 1022 |
| TspRI | CASTG | 4 cut(s) | 436, 526, 849, 975 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 800 |
| Vha464I | CTTAAG | 2 cut(s) | 104, 217 |
| VneI | GTGCAC | 1 cut(s) | 238 |
| XceI | RCATGY | 1 cut(s) | 16 |
| XspI | CTAG | 3 cut(s) | 731, 776, 882 |