pycom05g32510

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0000095
Physical Location & Seq
Forward (+)
31897579 .. 31899327
1749 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g32510.3

Sequence Viewer

Length: 1446 bp
ATGATGAATACTAAGGGCGGCGAGTGTAACTTGGTGGACAGAATTAGTAAGTTGCCAGAAGAAATTCTCTTTACTATTGTGTCCCTCTTGCCACTAAAAGAAGCAGGAGCTACCAGTATTCTTTCCAAGCGATGGCAATATGTGTGGGCGTCGACTGTGACTCTCGATTTTGATCCTAAACATGAGCTGGGTGAACATTATTGCCGCCTGCTGCGTGTAGAACCAGAACAAAAAGACCTGCTAAGACAGAGATATGTCGATTGGGTAAACACTGTGGTGGAACAACATAGAGGCCCTGTTATCGAACAATTCCGGGCTTACTTTGACATAGATGGTCATTTTACGAGTTCCATTGATAAGTGGATTCAGTTTGCAATGAATAAGAGAGTTCAAATACTTGAGCTGGTGTTTTGCAATGAATTGAGACGTAACTATAACGATGTCTATCCCTTTCCTGTCCAACTAATAGGTCTCCAAAATGATTCTACCTTGAAGCTAAATCCCACCCATTCTGACATTTCAAGTCTACATTCTTCTGGATACAATGTTGGATTTAAGTTCCTCAGAGTTCTTCATTTCAATTACGTTGACGTGTCGGGAAAAGTTCTTGAATACTTACTGTCAAATTGTCCAGTTCTTGAAAGATTAAAAGTGGAGAGTGCTAACAATAAGTTGGTTAATTTAAGAGTCGTTGGTTCGTCGTTGGCATTGAAATATTTAGATATTCAATTTTGTTTTGCCCTCAGAAGCATTGAGATTCGTGATGCAAACCTTGTTTCATTCATGTATGCGGGACGTCGGGTAAACTTGCTTCTCAGTAACGTACCTTTACTTGTAGAGGTATGCGTGGATGAGCGTATTAAACCTTTCTTGTTTGAGGGTCGTATCTACCATCGATCCATAGAGCTTCCCTTCACCCAACTGTCATGCTGTCTTTCTCAGCTAGAGGTCCTCATGCTAGCCATCGATGGAGCGATGTACTATCAGAACCATGTATTTCCTATATTATCAAATCTCAAGCATTTGGAATTAATGGTTTGTGCAAATGATTATTGGGTTCTTTGTCATTTAAGTGAGTTCATCAAGGCATCTCCTTACCTGGAGAGACTTGTGTTAAAGTTCTATTTTCCATCCTCTGAATTAGGAGAAGAGAAAGAGAAAGCTGCCAAATGCTCCCCCCATCCTAACCTCAAGGTGGTGGAAGTAGTAGGGTATCGTGCTCATCCACCTGTTGGTGAACTTGTCATGCACCTTGTGAAGAACGTTGCTGCACTGGAGAAAATAGTTATCGATCCTATCCGGCGTTGGTGGTGTCCTATTAGATCACATCCTAACGAAACGGTTAGGGGAGTTGAAGAGGTCAAAGAGGAAGTGCAAGGAAGAGCTCATGCTATGCAGCACCTTAAAGAAAATGTTCCTTCAACTATTGAATTTGTATGCCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

482

Amino Acids

55.53

Weight (kDa)

6.79

Isoelectric Point (pI)

45.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 799
Acc36I ACCTGC 1 cut(s) 246
AccB7I CCANNNNNTGG 2 cut(s) 132, 1232
AccI GTMKAC 2 cut(s) 152, 526
AciI CCGC 3 cut(s) 18, 205, 791
AclI AACGTT 1 cut(s) 1263
AclWI GGATC 3 cut(s) 167, 891, 1286
AcsI RAATTY 2 cut(s) 63, 1430
AcyI GRCGYC 2 cut(s) 149, 796
AdeI CACNNNGTG 1 cut(s) 1255
AfaI GTAC 2 cut(s) 825, 980
AfiI CCNNNNNNNGG 3 cut(s) 132, 1195, 1232
AflIII ACRYGT 1 cut(s) 591
AjiI CACGTC 1 cut(s) 592
AjnI CCWGG 1 cut(s) 1098
AleI CACNNNNGTG 1 cut(s) 275
AluBI AGCT 8 cut(s) 110, 187, 403, 496, 907, 943, 1163, 1385
AluI AGCT 8 cut(s) 110, 187, 403, 496, 907, 943, 1163, 1385
Alw21I GWGCWC 2 cut(s) 1222, 1387
Alw26I GTCTC 3 cut(s) 418, 476, 1099
AlwI GGATC 3 cut(s) 167, 891, 1286
AoxI GGCC 1 cut(s) 292
ApeKI GCWGC 4 cut(s) 211, 1163, 1268, 1396
ApoI RAATTY 2 cut(s) 63, 1430
AseI ATTAAT 1 cut(s) 1031
Asp700I GAANNNNTTC 2 cut(s) 63, 1413
AspS9I GGNCC 2 cut(s) 293, 949
AsuC2I CCSGG 1 cut(s) 314
AsuHPI GGTGA 3 cut(s) 203, 907, 1247
AsuNHI GCTAGC 1 cut(s) 958
AvaII GGWCC 1 cut(s) 949
BanII GRGCYC 1 cut(s) 1387
BarI GAAGNNNNNNTAC 2 cut(s) 795, 827
Bbv12I GWGCWC 2 cut(s) 1222, 1387
BbvI GCAGC 4 cut(s) 198, 1150, 1255, 1408
BccI CCATC 7 cut(s) 126, 326, 900, 962, 971, 1138, 1188
BciT130I CCWGG 1 cut(s) 1100
BciVI GTATCC 1 cut(s) 533
BcnI CCSGG 1 cut(s) 314
BcoDI GTCTC 3 cut(s) 418, 476, 1099
BfaI CTAG 3 cut(s) 944, 959, 1444
BfuAI ACCTGC 1 cut(s) 246
BfuI GTATCC 1 cut(s) 533
BisI GCNGC 6 cut(s) 19, 205, 212, 1164, 1269, 1397
BlsI GCNGC 6 cut(s) 20, 206, 213, 1165, 1270, 1398
Bme1390I CCNGG 2 cut(s) 314, 1100
Bme18I GGWCC 1 cut(s) 949
BmgBI CACGTC 1 cut(s) 592
BmgT120I GGNCC 2 cut(s) 293, 949
BmrFI CCNGG 2 cut(s) 314, 1100
BmsI GCATC 2 cut(s) 754, 1097
BmtI GCTAGC 1 cut(s) 962
BpmI CTGGAG 2 cut(s) 1121, 1295
BpuEI CTTGAG 3 cut(s) 419, 1001, 1175
BpuMI CCSGG 1 cut(s) 314
Bsa29I ATCGAT 3 cut(s) 895, 966, 1290
BsaBI GATNNNNATC 2 cut(s) 171, 444
BsaHI GRCGYC 2 cut(s) 149, 796
BsaI GGTCTC 1 cut(s) 476
Bsc4I CCNNNNNNNGG 3 cut(s) 132, 1195, 1232
Bse1I ACTGG 3 cut(s) 114, 632, 1278
Bse3DI GCAATG 2 cut(s) 381, 421
Bse8I GATNNNNATC 2 cut(s) 171, 444
BseBI CCWGG 1 cut(s) 1100
BseCI ATCGAT 3 cut(s) 895, 966, 1290
BseGI GGATG 5 cut(s) 856, 1130, 1180, 1222, 1327
BseJI GATNNNNATC 2 cut(s) 171, 444
BseLI CCNNNNNNNGG 3 cut(s) 132, 1195, 1232
BseMI GCAATG 2 cut(s) 381, 421
BseMII CTCAG 4 cut(s) 577, 757, 829, 953
BseNI ACTGG 3 cut(s) 114, 632, 1278
BseXI GCAGC 4 cut(s) 198, 1150, 1255, 1408
BseYI CCCAGC 1 cut(s) 187
BsgI GTGCAG 1 cut(s) 1254
BshFI GGCC 1 cut(s) 294
BshVI ATCGAT 3 cut(s) 895, 966, 1290
BsiHKAI GWGCWC 2 cut(s) 1222, 1387
BsiSI CCGG 2 cut(s) 313, 1300
BslFI GGGAC 2 cut(s) 67, 807
BslI CCNNNNNNNGG 3 cut(s) 132, 1195, 1232
BsmAI GTCTC 3 cut(s) 418, 476, 1099
BsmBI CGTCTC 1 cut(s) 418
BsmFI GGGAC 2 cut(s) 67, 807
BsnI GGCC 1 cut(s) 294
Bso31I GGTCTC 1 cut(s) 476
Bsp1286I GDGCHC 2 cut(s) 1222, 1387
Bsp143I GATC 4 cut(s) 172, 896, 1291, 1322
BspACI CCGC 3 cut(s) 18, 205, 791
BspANI GGCC 1 cut(s) 294
BspCNI CTCAG 4 cut(s) 576, 756, 828, 952
BspDI ATCGAT 3 cut(s) 895, 966, 1290
BspMI ACCTGC 1 cut(s) 246
BspOI GCTAGC 1 cut(s) 962
BspPI GGATC 3 cut(s) 167, 891, 1286
BspQI GCTCTTC 1 cut(s) 1375
BspTNI GGTCTC 1 cut(s) 476
BsrDI GCAATG 2 cut(s) 381, 421
BsrI ACTGG 3 cut(s) 114, 632, 1278
BssMI GATC 4 cut(s) 172, 896, 1291, 1322
BssNI GRCGYC 2 cut(s) 149, 796
Bst2UI CCWGG 1 cut(s) 1100
Bst4CI ACNGT 5 cut(s) 157, 274, 621, 924, 1342
Bst6I CTCTTC 3 cut(s) 1143, 1350, 1375
BstACI GRCGYC 2 cut(s) 149, 796
BstC8I GCNNGC 2 cut(s) 209, 960
BstDEI CTNAG 6 cut(s) 12, 242, 563, 743, 815, 939
BstF5I GGATG 5 cut(s) 856, 1130, 1180, 1222, 1327
BstKTI GATC 4 cut(s) 175, 899, 1294, 1325
BstMAI GTCTC 3 cut(s) 418, 476, 1099
BstMBI GATC 4 cut(s) 172, 896, 1291, 1322
BstNI CCWGG 1 cut(s) 1100
BstSCI CCNGG 2 cut(s) 312, 1098
BstV1I GCAGC 4 cut(s) 198, 1150, 1255, 1408
Bsu15I ATCGAT 3 cut(s) 895, 966, 1290
BsuI GTATCC 1 cut(s) 533
BsuRI GGCC 1 cut(s) 294
BsuTUI ATCGAT 3 cut(s) 895, 966, 1290
BtgZI GCGATG 2 cut(s) 145, 989
BtrI CACGTC 1 cut(s) 592
BtsCI GGATG 5 cut(s) 856, 1130, 1180, 1222, 1327
BtsIMutI CAGTG 2 cut(s) 270, 1271
BveI ACCTGC 1 cut(s) 246
Cac8I GCNNGC 2 cut(s) 209, 960
Cfr13I GGNCC 2 cut(s) 293, 949
ClaI ATCGAT 3 cut(s) 895, 966, 1290
CseI GACGC 1 cut(s) 138
Csp6I GTAC 2 cut(s) 824, 979
CspCI CAANNNNNGTGG 2 cut(s) 125, 160
CviAII CATG 7 cut(s) 182, 784, 927, 955, 992, 1246, 1388
CviQI GTAC 2 cut(s) 824, 979
DdeI CTNAG 6 cut(s) 12, 242, 563, 743, 815, 939
DpnI GATC 4 cut(s) 174, 898, 1293, 1324
DpnII GATC 4 cut(s) 172, 896, 1291, 1322
DraIII CACNNNGTG 1 cut(s) 1255
Eam1104I CTCTTC 3 cut(s) 1143, 1350, 1375
EarI CTCTTC 3 cut(s) 1143, 1350, 1375
Ecl136II GAGCTC 1 cut(s) 1385
Eco24I GRGCYC 1 cut(s) 1387
Eco31I GGTCTC 1 cut(s) 476
Eco47I GGWCC 1 cut(s) 949
Eco53kI GAGCTC 1 cut(s) 1385
EcoICRI GAGCTC 1 cut(s) 1385
EcoO109I RGGNCCY 2 cut(s) 293, 949
EcoRII CCWGG 1 cut(s) 1098
EcoT38I GRGCYC 1 cut(s) 1387
Esp3I CGTCTC 1 cut(s) 418
FaeI CATG 7 cut(s) 185, 787, 930, 958, 995, 1249, 1391
FaqI GGGAC 2 cut(s) 67, 807
FatI CATG 7 cut(s) 181, 783, 926, 954, 991, 1245, 1387
FauI CCCGC 1 cut(s) 784
FblI GTMKAC 2 cut(s) 152, 526
Fnu4HI GCNGC 6 cut(s) 19, 205, 212, 1164, 1269, 1397
FokI GGATG 5 cut(s) 863, 1117, 1167, 1209, 1314
FriOI GRGCYC 1 cut(s) 1387
Fsp4HI GCNGC 6 cut(s) 19, 205, 212, 1164, 1269, 1397
FspBI CTAG 3 cut(s) 944, 959, 1444
GluI GCNGC 6 cut(s) 19, 205, 212, 1164, 1269, 1397
GsaI CCCAGC 1 cut(s) 191
GsuI CTGGAG 2 cut(s) 1121, 1295
HaeIII GGCC 1 cut(s) 294
HapII CCGG 2 cut(s) 313, 1300
HgaI GACGC 1 cut(s) 138
Hin1I GRCGYC 2 cut(s) 149, 796
Hin1II CATG 7 cut(s) 185, 787, 930, 958, 995, 1249, 1391
HincII GTYRAC 2 cut(s) 153, 589
HindII GTYRAC 2 cut(s) 153, 589
HinfI GANTC 5 cut(s) 160, 364, 482, 687, 757
HpaII CCGG 2 cut(s) 313, 1300
HphI GGTGA 3 cut(s) 203, 907, 1247
Hpy166II GTNNAC 8 cut(s) 37, 153, 194, 268, 527, 589, 805, 1238
Hpy188I TCNGA 5 cut(s) 514, 566, 746, 987, 1138
Hpy188III TCNNGA 6 cut(s) 164, 537, 597, 608, 638, 761
Hpy8I GTNNAC 8 cut(s) 37, 153, 194, 268, 527, 589, 805, 1238
Hpy99I CGWCG 3 cut(s) 154, 703, 801
HpyAV CCTTC 2 cut(s) 922, 1428
HpyCH4III ACNGT 5 cut(s) 157, 274, 621, 924, 1342
HpyCH4IV ACGT 6 cut(s) 427, 585, 591, 796, 822, 1263
HpyCH4V TGCA 8 cut(s) 374, 414, 767, 1043, 1249, 1271, 1375, 1396
HpyF3I CTNAG 6 cut(s) 12, 242, 563, 743, 815, 939
HpySE526I ACGT 6 cut(s) 427, 585, 591, 796, 822, 1263
Hsp92I GRCGYC 2 cut(s) 149, 796
Hsp92II CATG 7 cut(s) 185, 787, 930, 958, 995, 1249, 1391
Kzo9I GATC 4 cut(s) 172, 896, 1291, 1322
LguI GCTCTTC 1 cut(s) 1375
LmnI GCTCC 3 cut(s) 107, 971, 1178
Lsp1109I GCAGC 4 cut(s) 198, 1150, 1255, 1408
LweI GCATC 2 cut(s) 754, 1097
MaeI CTAG 3 cut(s) 944, 959, 1444
MaeII ACGT 6 cut(s) 427, 585, 591, 796, 822, 1263
MaeIII GTNAC 4 cut(s) 26, 157, 428, 818
MalI GATC 4 cut(s) 174, 898, 1293, 1324
MboI GATC 4 cut(s) 172, 896, 1291, 1322
MboII GAAGA 7 cut(s) 71, 525, 563, 1160, 1270, 1367, 1392
MhlI GDGCHC 2 cut(s) 1222, 1387
MlyI GAGTC 2 cut(s) 154, 696
MmeI TCCRAC 2 cut(s) 484, 529
MroXI GAANNNNTTC 2 cut(s) 63, 1413
MseI TTAA 9 cut(s) 555, 647, 678, 683, 861, 1031, 1070, 1115, 1404
MslI CAYNNNNRTG 2 cut(s) 275, 1071
MspI CCGG 2 cut(s) 313, 1300
MspR9I CCNGG 2 cut(s) 314, 1100
MvaI CCWGG 1 cut(s) 1100
NciI CCSGG 1 cut(s) 314
NdeII GATC 4 cut(s) 172, 896, 1291, 1322
NheI GCTAGC 1 cut(s) 958
NlaIII CATG 7 cut(s) 185, 787, 930, 958, 995, 1249, 1391
NmuCI GTSAC 1 cut(s) 157
OliI CACNNNNGTG 1 cut(s) 275
PciSI GCTCTTC 1 cut(s) 1375
PdmI GAANNNNTTC 2 cut(s) 63, 1413
PfeI GAWTC 3 cut(s) 364, 482, 757
PflMI CCANNNNNTGG 2 cut(s) 132, 1232
PkrI GCNGC 6 cut(s) 20, 206, 213, 1165, 1270, 1398
PleI GAGTC 2 cut(s) 154, 695
PpsI GAGTC 2 cut(s) 154, 695
PpuMI RGGWCCY 1 cut(s) 949
PshBI ATTAAT 1 cut(s) 1031
Psp124BI GAGCTC 1 cut(s) 1387
Psp1406I AACGTT 1 cut(s) 1263
Psp5II RGGWCCY 1 cut(s) 949
Psp6I CCWGG 1 cut(s) 1098
PspFI CCCAGC 1 cut(s) 187
PspGI CCWGG 1 cut(s) 1098
PspPI GGNCC 2 cut(s) 293, 949
PspPPI RGGWCCY 1 cut(s) 949
RsaI GTAC 2 cut(s) 825, 980
RsaNI GTAC 2 cut(s) 824, 979
RseI CAYNNNNRTG 2 cut(s) 275, 1071
SacI GAGCTC 1 cut(s) 1387
SalI GTCGAC 1 cut(s) 151
SapI GCTCTTC 1 cut(s) 1375
SaqAI TTAA 9 cut(s) 555, 647, 678, 683, 861, 1031, 1070, 1115, 1404
SatI GCNGC 6 cut(s) 19, 205, 212, 1164, 1269, 1397
Sau3AI GATC 4 cut(s) 172, 896, 1291, 1322
Sau96I GGNCC 2 cut(s) 293, 949
SchI GAGTC 2 cut(s) 154, 696
ScrFI CCNGG 2 cut(s) 314, 1100
SduI GDGCHC 2 cut(s) 1222, 1387
SfaNI GCATC 2 cut(s) 754, 1097
SinI GGWCC 1 cut(s) 949
SmiMI CAYNNNNRTG 2 cut(s) 275, 1071
SmlI CTYRAG 3 cut(s) 398, 1016, 1190
SmoI CTYRAG 3 cut(s) 398, 1016, 1190
SsiI CCGC 3 cut(s) 18, 205, 791
SspI AATATT 1 cut(s) 716
SspMI CTAG 3 cut(s) 944, 959, 1444
SstI GAGCTC 1 cut(s) 1387
StyD4I CCNGG 2 cut(s) 312, 1098
TaaI ACNGT 5 cut(s) 157, 274, 621, 924, 1342
TaiI ACGT 6 cut(s) 430, 588, 594, 799, 825, 1266
TaqI TCGA 7 cut(s) 152, 165, 258, 303, 895, 966, 1290
TatI WGTACW 1 cut(s) 978
TauI GCSGC 2 cut(s) 21, 207
TfiI GAWTC 3 cut(s) 364, 482, 757
Tru1I TTAA 9 cut(s) 555, 647, 678, 683, 861, 1031, 1070, 1115, 1404
Tru9I TTAA 9 cut(s) 555, 647, 678, 683, 861, 1031, 1070, 1115, 1404
TscAI CASTG 2 cut(s) 277, 1278
TseFI GTSAC 1 cut(s) 157
TseI GCWGC 4 cut(s) 211, 1163, 1268, 1396
Tsp45I GTSAC 1 cut(s) 157
TspDTI ATGAA 7 cut(s) 20, 392, 432, 563, 768, 772, 1069
TspRI CASTG 2 cut(s) 277, 1278
Van91I CCANNNNNTGG 2 cut(s) 132, 1232
VpaK11BI GGWCC 1 cut(s) 949
VspI ATTAAT 1 cut(s) 1031
XapI RAATTY 2 cut(s) 63, 1430
XmiI GTMKAC 2 cut(s) 152, 526
XmnI GAANNNNTTC 2 cut(s) 63, 1413
XspI CTAG 3 cut(s) 944, 959, 1444
ZraI GACGTC 1 cut(s) 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.