Rh5BG186000

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000095
Physical Location & Seq
Reverse (-)
20455611 .. 20457573
1963 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG186000.1

Sequence Viewer

Length: 1335 bp
ATGAAGAAAAGGGTGCGCCAACCGACTTCTCAATCTGTCAAAGACGAGAATGATTGCGAATTGAGGAACAGAAAGCAAAATAATGCTGGAAACAAGTTGGTGGACAGAATCAGTGTGTTGCCTGATGAAATTTTAGTCAGTATACTCTCTCTATTGCCCCTGAAGGAAGCACAAGCTACTAGTGTTCTTTCTAAGCGATGGCGGCATGTGTGGGCGTCTATTACTACTCTTAACTTTGATTGTGCCCCAACCATCTTTAGTTTCATATGCAGCTATATATCTTCCAAGTACTACACCCTCAAATCGGAAGTAGAAGGTGAAATCAGTAGGTTTGTCCCTTGGATCAATAGTGTGGTGGAACAGCATAATGTTCCATGCATTGAACATTTCAGGGTTTGTTCTCATCTAAATCAAGAATTTGCAAGTTCCATTGATAAATGGGTTCAATTTGCAATGGAAAAGGGAGTTCGAACACTGGAGCTGGACTTTTCAGTCTGGGGTTTTGTTCCTCCAATGTATACTTTCCCCCATTACCTTTTGAAGCACTTGTGTGATGATCATATTCCAATTCAAGGCCCTTGTGCATGCATCGGTTTGAAGTTCCTTAAGTGTGAGTCCCCATCCTTGAATGGTCTAAGAGTTGTTGGTTCATCGGTTGCATTGAAGTACCTACTCATACAAGACTGTAGCAACATCAAAAGCATTGAGATTTATGATGCGAAACTCATTTCATTTATATACAAGGGAAAGCATGTGAACCTGCTTCTTAGAAATGTGCCGCTGCTTGTGGAGAGCTGCAAGAGAAATCGTGTTCAACACTACAAGAAAGATCTTGTGTTTCCTGTACTAGCAAGTCTCAAGCATTTGGAATTATGTTTCTACACAGAAGATGATTCCATTCTTGTTCAATTAACTTCTTTCATCAACGCCAGTCCTAACTTGCAGAGTCTTTTGTTCGCTTTGGAAACACCATTTTCTTCGAGAAGAGACATAAAATATAAAGCCGCCAAATGTTCCCATCAACATCTCCGGGTAGTGCAACTAGTGGCATATGATGTAGGATATGGTGCTAGCACATATCATCTTGAAGTTGTCAAATACCTGATAGAGACTGCTGTTGAACTTGAAAAAATCTTAATTACTCCTAATACTGAAGATGAGGAAAAGAAGGACAGAGTAAAGAAGGAAATTGAAGAAGAGGAGAAGAAACAGAAGGCAAGAAATCATTCTAGAAACCAGCTTATAGAAAGAGCTCCTTTAACCATAGCTTTTGTTAAATATATTAAGTATTGTGAGACGAAGTCCAAATTTGCTGTATTAGGCCGTGTTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

444

Amino Acids

51.03

Weight (kDa)

8.88

Isoelectric Point (pI)

51.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 37 - 73 8.7e-08 F-box domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 491
Acc36I ACCTGC 1 cut(s) 768
AccI GTMKAC 2 cut(s) 142, 518
AciI CCGC 3 cut(s) 202, 779, 1005
AclWI GGATC 1 cut(s) 350
AcsI RAATTY 3 cut(s) 129, 416, 1307
AcuI CTGAAG 2 cut(s) 182, 1173
AcyI GRCGYC 1 cut(s) 215
AfaI GTAC 3 cut(s) 290, 668, 846
AfiI CCNNNNNNNGG 2 cut(s) 304, 572
AflII CTTAAG 1 cut(s) 605
AhlI ACTAGT 2 cut(s) 179, 1042
AleI CACNNNNGTG 1 cut(s) 549
AluBI AGCT 7 cut(s) 176, 273, 481, 795, 1240, 1253, 1268
AluI AGCT 7 cut(s) 176, 273, 481, 795, 1240, 1253, 1268
Alw21I GWGCWC 1 cut(s) 1255
Alw26I GTCTC 4 cut(s) 860, 981, 1103, 1289
AlwI GGATC 1 cut(s) 350
AoxI GGCC 2 cut(s) 574, 1321
ApeKI GCWGC 3 cut(s) 270, 781, 795
ApoI RAATTY 3 cut(s) 129, 416, 1307
Asp700I GAANNNNTTC 1 cut(s) 1225
AspLEI GCGC 1 cut(s) 18
AspS9I GGNCC 1 cut(s) 575
AsuC2I CCSGG 1 cut(s) 1031
AsuHPI GGTGA 1 cut(s) 329
AsuII TTCGAA 1 cut(s) 469
AsuNHI GCTAGC 1 cut(s) 1070
BaeGI GKGCMC 1 cut(s) 247
BanII GRGCYC 1 cut(s) 1255
Bbv12I GWGCWC 1 cut(s) 1255
BbvI GCAGC 3 cut(s) 282, 768, 782
BccI CCATC 4 cut(s) 192, 260, 628, 1026
BceAI ACGGC 1 cut(s) 1308
BclI TGATCA 1 cut(s) 556
BcnI CCSGG 1 cut(s) 1031
BcoDI GTCTC 4 cut(s) 860, 981, 1103, 1289
BcuI ACTAGT 2 cut(s) 179, 1042
BfaI CTAG 5 cut(s) 180, 848, 1043, 1071, 1230
BfmI CTRYAG 1 cut(s) 685
BfrI CTTAAG 1 cut(s) 605
BfuAI ACCTGC 1 cut(s) 768
BglII AGATCT 1 cut(s) 829
BisI GCNGC 6 cut(s) 203, 271, 779, 782, 796, 1005
BlsI GCNGC 6 cut(s) 204, 272, 780, 783, 797, 1006
BmcAI AGTACT 1 cut(s) 290
Bme1390I CCNGG 1 cut(s) 1031
BmgT120I GGNCC 1 cut(s) 575
BmrFI CCNGG 1 cut(s) 1031
BmsI GCATC 2 cut(s) 597, 706
BmtI GCTAGC 1 cut(s) 1074
BpmI CTGGAG 1 cut(s) 497
Bpu14I TTCGAA 1 cut(s) 469
BpuEI CTTGAG 1 cut(s) 842
BpuMI CCSGG 1 cut(s) 1031
BsaHI GRCGYC 1 cut(s) 215
BsaJI CCNNGG 1 cut(s) 338
Bsc4I CCNNNNNNNGG 2 cut(s) 304, 572
Bse1I ACTGG 2 cut(s) 480, 930
Bse3DI GCAATG 1 cut(s) 459
BseDI CCNNGG 1 cut(s) 338
BseGI GGATG 1 cut(s) 620
BseLI CCNNNNNNNGG 2 cut(s) 304, 572
BseMI GCAATG 1 cut(s) 459
BseNI ACTGG 2 cut(s) 480, 930
BseRI GAGGAG 1 cut(s) 1214
BseSI GKGCMC 1 cut(s) 247
BseXI GCAGC 3 cut(s) 282, 768, 782
BshFI GGCC 2 cut(s) 576, 1323
BsiHKAI GWGCWC 1 cut(s) 1255
BsiSI CCGG 1 cut(s) 1030
BslFI GGGAC 2 cut(s) 320, 601
BslI CCNNNNNNNGG 2 cut(s) 304, 572
BsmAI GTCTC 4 cut(s) 860, 981, 1103, 1289
BsmBI CGTCTC 1 cut(s) 1289
BsmFI GGGAC 2 cut(s) 320, 601
BsnI GGCC 2 cut(s) 576, 1323
Bsp119I TTCGAA 1 cut(s) 469
Bsp1286I GDGCHC 2 cut(s) 247, 1255
Bsp143I GATC 3 cut(s) 342, 556, 829
BspACI CCGC 3 cut(s) 202, 779, 1005
BspANI GGCC 2 cut(s) 576, 1323
BspMI ACCTGC 1 cut(s) 768
BspOI GCTAGC 1 cut(s) 1074
BspPI GGATC 1 cut(s) 350
BspT104I TTCGAA 1 cut(s) 469
BspTI CTTAAG 1 cut(s) 605
BsrDI GCAATG 1 cut(s) 459
BsrI ACTGG 2 cut(s) 480, 930
BssECI CCNNGG 1 cut(s) 338
BssMI GATC 3 cut(s) 342, 556, 829
BssNAI GTATAC 2 cut(s) 143, 519
BssNI GRCGYC 1 cut(s) 215
BssT1I CCWWGG 1 cut(s) 338
Bst1107I GTATAC 2 cut(s) 143, 519
Bst4CI ACNGT 1 cut(s) 686
Bst6I CTCTTC 2 cut(s) 979, 1191
BstACI GRCGYC 1 cut(s) 215
BstAFI CTTAAG 1 cut(s) 605
BstBI TTCGAA 1 cut(s) 469
BstC8I GCNNGC 2 cut(s) 586, 1072
BstDEI CTNAG 3 cut(s) 192, 635, 767
BstF5I GGATG 1 cut(s) 620
BstHHI GCGC 1 cut(s) 18
BstKTI GATC 3 cut(s) 345, 559, 832
BstMAI GTCTC 4 cut(s) 860, 981, 1103, 1289
BstMBI GATC 3 cut(s) 342, 556, 829
BstMWI GCNNNNNNNGC 1 cut(s) 202
BstNSI RCATGY 3 cut(s) 209, 588, 755
BstSCI CCNGG 1 cut(s) 1029
BstSFI CTRYAG 1 cut(s) 685
BstSLI GKGCMC 1 cut(s) 247
BstV1I GCAGC 3 cut(s) 282, 768, 782
BstX2I RGATCY 1 cut(s) 829
BstYI RGATCY 1 cut(s) 829
BstZ17I GTATAC 2 cut(s) 143, 519
BsuRI GGCC 2 cut(s) 576, 1323
BtgZI GCGATG 1 cut(s) 211
BtsCI GGATG 1 cut(s) 620
BtsIMutI CAGTG 2 cut(s) 118, 473
BveI ACCTGC 1 cut(s) 768
Cac8I GCNNGC 2 cut(s) 586, 1072
CfoI GCGC 1 cut(s) 18
Cfr13I GGNCC 1 cut(s) 575
CseI GACGC 1 cut(s) 204
Csp6I GTAC 3 cut(s) 289, 667, 845
CviAII CATG 4 cut(s) 206, 375, 585, 752
CviQI GTAC 3 cut(s) 289, 667, 845
DdeI CTNAG 3 cut(s) 192, 635, 767
DpnI GATC 3 cut(s) 344, 558, 831
DpnII GATC 3 cut(s) 342, 556, 829
DrdI GACNNNNNNGTC 1 cut(s) 491
DseDI GACNNNNNNGTC 1 cut(s) 491
Eam1104I CTCTTC 2 cut(s) 979, 1191
EarI CTCTTC 2 cut(s) 979, 1191
Ecl136II GAGCTC 1 cut(s) 1253
Eco130I CCWWGG 1 cut(s) 338
Eco24I GRGCYC 1 cut(s) 1255
Eco53kI GAGCTC 1 cut(s) 1253
Eco57I CTGAAG 2 cut(s) 182, 1173
EcoICRI GAGCTC 1 cut(s) 1253
EcoO109I RGGNCCY 1 cut(s) 575
EcoT14I CCWWGG 1 cut(s) 338
EcoT22I ATGCAT 2 cut(s) 380, 590
EcoT38I GRGCYC 1 cut(s) 1255
ErhI CCWWGG 1 cut(s) 338
Esp3I CGTCTC 1 cut(s) 1289
FaeI CATG 4 cut(s) 209, 378, 588, 755
FalI AAGNNNNNCTT 2 cut(s) 1240, 1272
FaqI GGGAC 2 cut(s) 320, 601
FatI CATG 4 cut(s) 205, 374, 584, 751
FauNDI CATATG 2 cut(s) 266, 1051
FbaI TGATCA 1 cut(s) 556
FblI GTMKAC 2 cut(s) 142, 518
Fnu4HI GCNGC 6 cut(s) 203, 271, 779, 782, 796, 1005
FokI GGATG 1 cut(s) 607
FriOI GRGCYC 1 cut(s) 1255
Fsp4HI GCNGC 6 cut(s) 203, 271, 779, 782, 796, 1005
FspBI CTAG 5 cut(s) 180, 848, 1043, 1071, 1230
GlaI GCGC 1 cut(s) 17
GluI GCNGC 6 cut(s) 203, 271, 779, 782, 796, 1005
GsuI CTGGAG 1 cut(s) 497
HaeIII GGCC 2 cut(s) 576, 1323
HapII CCGG 1 cut(s) 1030
HgaI GACGC 1 cut(s) 204
HhaI GCGC 1 cut(s) 18
Hin1I GRCGYC 1 cut(s) 215
Hin1II CATG 4 cut(s) 209, 378, 588, 755
Hin6I GCGC 1 cut(s) 16
HinP1I GCGC 1 cut(s) 16
HinfI GANTC 4 cut(s) 108, 614, 893, 946
HpaII CCGG 1 cut(s) 1030
HphI GGTGA 1 cut(s) 329
Hpy166II GTNNAC 4 cut(s) 103, 143, 519, 757
Hpy188I TCNGA 1 cut(s) 307
Hpy188III TCNNGA 4 cut(s) 413, 981, 1085, 1230
Hpy8I GTNNAC 4 cut(s) 103, 143, 519, 757
HpyAV CCTTC 5 cut(s) 157, 308, 1162, 1177, 1207
HpyCH4III ACNGT 1 cut(s) 686
HpyF10VI GCNNNNNNNGC 1 cut(s) 202
HpyF3I CTNAG 3 cut(s) 192, 635, 767
Hsp92I GRCGYC 1 cut(s) 215
Hsp92II CATG 4 cut(s) 209, 378, 588, 755
HspAI GCGC 1 cut(s) 16
Ksp22I TGATCA 1 cut(s) 556
Kzo9I GATC 3 cut(s) 342, 556, 829
LmnI GCTCC 2 cut(s) 478, 1258
Lsp1109I GCAGC 3 cut(s) 282, 768, 782
LweI GCATC 2 cut(s) 597, 706
MaeI CTAG 5 cut(s) 180, 848, 1043, 1071, 1230
MalI GATC 3 cut(s) 344, 558, 831
MboI GATC 3 cut(s) 342, 556, 829
MboII GAAGA 9 cut(s) 16, 273, 899, 969, 996, 1166, 1205, 1208, 1216
MflI RGATCY 1 cut(s) 829
MhlI GDGCHC 2 cut(s) 247, 1255
MlyI GAGTC 2 cut(s) 623, 955
MnlI CCTC 5 cut(s) 57, 308, 519, 1153, 1192
Mph1103I ATGCAT 2 cut(s) 380, 590
MroXI GAANNNNTTC 1 cut(s) 1225
MseI TTAA 8 cut(s) 231, 606, 911, 1136, 1259, 1275, 1284, 1333
MslI CAYNNNNRTG 1 cut(s) 549
MspA1I CMGCKG 1 cut(s) 781
MspCI CTTAAG 1 cut(s) 605
MspI CCGG 1 cut(s) 1030
MspR9I CCNGG 1 cut(s) 1031
MwoI GCNNNNNNNGC 1 cut(s) 202
NciI CCSGG 1 cut(s) 1031
NdeI CATATG 2 cut(s) 266, 1051
NdeII GATC 3 cut(s) 342, 556, 829
NheI GCTAGC 1 cut(s) 1070
NlaIII CATG 4 cut(s) 209, 378, 588, 755
NsiI ATGCAT 2 cut(s) 380, 590
NspI RCATGY 3 cut(s) 209, 588, 755
NspV TTCGAA 1 cut(s) 469
OliI CACNNNNGTG 1 cut(s) 549
PaeI GCATGC 1 cut(s) 588
PdmI GAANNNNTTC 1 cut(s) 1225
PfeI GAWTC 2 cut(s) 108, 893
PflFI GACNNNGTC 1 cut(s) 1300
PkrI GCNGC 6 cut(s) 204, 272, 780, 783, 797, 1006
PleI GAGTC 2 cut(s) 622, 954
PpsI GAGTC 2 cut(s) 622, 954
Psp124BI GAGCTC 1 cut(s) 1255
PspPI GGNCC 1 cut(s) 575
PsuI RGATCY 1 cut(s) 829
PsyI GACNNNGTC 1 cut(s) 1300
RsaI GTAC 3 cut(s) 290, 668, 846
RsaNI GTAC 3 cut(s) 289, 667, 845
RseI CAYNNNNRTG 1 cut(s) 549
SacI GAGCTC 1 cut(s) 1255
SaqAI TTAA 8 cut(s) 231, 606, 911, 1136, 1259, 1275, 1284, 1333
SatI GCNGC 6 cut(s) 203, 271, 779, 782, 796, 1005
Sau3AI GATC 3 cut(s) 342, 556, 829
Sau96I GGNCC 1 cut(s) 575
ScaI AGTACT 1 cut(s) 290
SchI GAGTC 2 cut(s) 623, 955
ScrFI CCNGG 1 cut(s) 1031
SduI GDGCHC 2 cut(s) 247, 1255
SfaNI GCATC 2 cut(s) 597, 706
SfcI CTRYAG 1 cut(s) 685
SfuI TTCGAA 1 cut(s) 469
SmiMI CAYNNNNRTG 1 cut(s) 549
SmlI CTYRAG 2 cut(s) 605, 857
SmoI CTYRAG 2 cut(s) 605, 857
SpeI ACTAGT 2 cut(s) 179, 1042
SphI GCATGC 1 cut(s) 588
SsiI CCGC 3 cut(s) 202, 779, 1005
SspMI CTAG 5 cut(s) 180, 848, 1043, 1071, 1230
SstI GAGCTC 1 cut(s) 1255
StyD4I CCNGG 1 cut(s) 1029
StyI CCWWGG 1 cut(s) 338
TaaI ACNGT 1 cut(s) 686
TaqI TCGA 2 cut(s) 469, 980
TatI WGTACW 2 cut(s) 288, 844
TauI GCSGC 3 cut(s) 205, 781, 1007
TfiI GAWTC 2 cut(s) 108, 893
Tru1I TTAA 8 cut(s) 231, 606, 911, 1136, 1259, 1275, 1284, 1333
Tru9I TTAA 8 cut(s) 231, 606, 911, 1136, 1259, 1275, 1284, 1333
TscAI CASTG 2 cut(s) 118, 480
TseI GCWGC 3 cut(s) 270, 781, 795
TspDTI ATGAA 6 cut(s) 17, 141, 253, 639, 720, 910
TspRI CASTG 2 cut(s) 118, 480
Tth111I GACNNNGTC 1 cut(s) 1300
Vha464I CTTAAG 1 cut(s) 605
XapI RAATTY 3 cut(s) 129, 416, 1307
XbaI TCTAGA 1 cut(s) 1229
XceI RCATGY 3 cut(s) 209, 588, 755
XmiI GTMKAC 2 cut(s) 142, 518
XmnI GAANNNNTTC 1 cut(s) 1225
XspI CTAG 5 cut(s) 180, 848, 1043, 1071, 1230
ZrmI AGTACT 1 cut(s) 290
Zsp2I ATGCAT 2 cut(s) 380, 590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.