LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| F-box | PF00646 | 52 - 88 | 2.6e-06 | F-box domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 263 |
| AciI | CCGC | 3 cut(s) | 241, 247, 346 |
| AclWI | GGATC | 4 cut(s) | 129, 258, 375, 441 |
| AcsI | RAATTY | 1 cut(s) | 295 |
| AcyI | GRCGYC | 1 cut(s) | 260 |
| AfaI | GTAC | 2 cut(s) | 574, 605 |
| AgsI | TTSAA | 5 cut(s) | 237, 284, 404, 491, 570 |
| AhlI | ACTAGT | 1 cut(s) | 224 |
| AluBI | AGCT | 6 cut(s) | 114, 141, 221, 502, 518, 609 |
| AluI | AGCT | 6 cut(s) | 114, 141, 221, 502, 518, 609 |
| Alw21I | GWGCWC | 1 cut(s) | 116 |
| AlwI | GGATC | 4 cut(s) | 129, 258, 375, 441 |
| AoxI | GGCC | 1 cut(s) | 391 |
| ApeKI | GCWGC | 3 cut(s) | 215, 218, 515 |
| ApoI | RAATTY | 1 cut(s) | 295 |
| AseI | ATTAAT | 1 cut(s) | 29 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 565 |
| AspS9I | GGNCC | 1 cut(s) | 392 |
| AsuHPI | GGTGA | 2 cut(s) | 26, 116 |
| BanII | GRGCYC | 1 cut(s) | 116 |
| Bbv12I | GWGCWC | 1 cut(s) | 116 |
| BbvI | GCAGC | 3 cut(s) | 227, 230, 527 |
| BccI | CCATC | 3 cut(s) | 164, 449, 453 |
| BcuI | ACTAGT | 1 cut(s) | 224 |
| BfaI | CTAG | 3 cut(s) | 225, 428, 557 |
| BisI | GCNGC | 4 cut(s) | 216, 219, 346, 516 |
| BlsI | GCNGC | 4 cut(s) | 217, 220, 347, 517 |
| BmcAI | AGTACT | 1 cut(s) | 574 |
| BmgT120I | GGNCC | 1 cut(s) | 392 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 98, 130 |
| BpmI | CTGGAG | 1 cut(s) | 524 |
| BpuEI | CTTGAG | 2 cut(s) | 191, 518 |
| BsaHI | GRCGYC | 1 cut(s) | 260 |
| Bse3DI | GCAATG | 2 cut(s) | 374, 480 |
| BseGI | GGATG | 2 cut(s) | 175, 464 |
| BseMI | GCAATG | 2 cut(s) | 374, 480 |
| BseMII | CTCAG | 1 cut(s) | 572 |
| BseXI | GCAGC | 3 cut(s) | 227, 230, 527 |
| BshFI | GGCC | 1 cut(s) | 393 |
| BsiHKAI | GWGCWC | 1 cut(s) | 116 |
| BsiSI | CCGG | 1 cut(s) | 167 |
| BsmI | GAATGC | 1 cut(s) | 174 |
| BsnI | GGCC | 1 cut(s) | 393 |
| Bsp1286I | GDGCHC | 1 cut(s) | 116 |
| Bsp143I | GATC | 5 cut(s) | 121, 250, 367, 430, 446 |
| BspACI | CCGC | 3 cut(s) | 241, 247, 346 |
| BspANI | GGCC | 1 cut(s) | 393 |
| BspCNI | CTCAG | 1 cut(s) | 573 |
| BspPI | GGATC | 4 cut(s) | 129, 258, 375, 441 |
| BsrDI | GCAATG | 2 cut(s) | 374, 480 |
| BssMI | GATC | 5 cut(s) | 121, 250, 367, 430, 446 |
| BssNI | GRCGYC | 1 cut(s) | 260 |
| Bst4CI | ACNGT | 1 cut(s) | 408 |
| Bst6I | CTCTTC | 1 cut(s) | 582 |
| BstACI | GRCGYC | 1 cut(s) | 260 |
| BstC8I | GCNNGC | 3 cut(s) | 59, 200, 418 |
| BstDEI | CTNAG | 1 cut(s) | 581 |
| BstF5I | GGATG | 2 cut(s) | 175, 464 |
| BstKTI | GATC | 5 cut(s) | 124, 253, 370, 433, 449 |
| BstMBI | GATC | 5 cut(s) | 121, 250, 367, 430, 446 |
| BstV1I | GCAGC | 3 cut(s) | 227, 230, 527 |
| BstX2I | RGATCY | 1 cut(s) | 250 |
| BstYI | RGATCY | 1 cut(s) | 250 |
| BsuRI | GGCC | 1 cut(s) | 393 |
| BtsCI | GGATG | 2 cut(s) | 175, 464 |
| BtsIMutI | CAGTG | 1 cut(s) | 163 |
| Cac8I | GCNNGC | 3 cut(s) | 59, 200, 418 |
| Cfr13I | GGNCC | 1 cut(s) | 392 |
| CseI | GACGC | 1 cut(s) | 249 |
| Csp6I | GTAC | 2 cut(s) | 573, 604 |
| CviAII | CATG | 2 cut(s) | 310, 548 |
| CviQI | GTAC | 2 cut(s) | 573, 604 |
| DdeI | CTNAG | 1 cut(s) | 581 |
| DpnI | GATC | 5 cut(s) | 123, 252, 369, 432, 448 |
| DpnII | GATC | 5 cut(s) | 121, 250, 367, 430, 446 |
| Eam1104I | CTCTTC | 1 cut(s) | 582 |
| EarI | CTCTTC | 1 cut(s) | 582 |
| Ecl136II | GAGCTC | 1 cut(s) | 114 |
| Eco24I | GRGCYC | 1 cut(s) | 116 |
| Eco53kI | GAGCTC | 1 cut(s) | 114 |
| EcoICRI | GAGCTC | 1 cut(s) | 114 |
| EcoRI | GAATTC | 1 cut(s) | 295 |
| EcoT38I | GRGCYC | 1 cut(s) | 116 |
| FaeI | CATG | 2 cut(s) | 313, 551 |
| FaiI | YATR | 8 cut(s) | 144, 269, 311, 329, 387, 537, 539, 549 |
| FatI | CATG | 2 cut(s) | 309, 547 |
| FauI | CCCGC | 1 cut(s) | 240 |
| FblI | GTMKAC | 1 cut(s) | 263 |
| Fnu4HI | GCNGC | 4 cut(s) | 216, 219, 346, 516 |
| FokI | GGATG | 2 cut(s) | 182, 471 |
| FriOI | GRGCYC | 1 cut(s) | 116 |
| Fsp4HI | GCNGC | 4 cut(s) | 216, 219, 346, 516 |
| FspBI | CTAG | 3 cut(s) | 225, 428, 557 |
| GluI | GCNGC | 4 cut(s) | 216, 219, 346, 516 |
| GsuI | CTGGAG | 1 cut(s) | 524 |
| HaeIII | GGCC | 1 cut(s) | 393 |
| HapII | CCGG | 1 cut(s) | 167 |
| HgaI | GACGC | 1 cut(s) | 249 |
| Hin1I | GRCGYC | 1 cut(s) | 260 |
| Hin1II | CATG | 2 cut(s) | 313, 551 |
| HinfI | GANTC | 4 cut(s) | 153, 271, 566, 593 |
| HpaII | CCGG | 1 cut(s) | 167 |
| HphI | GGTGA | 2 cut(s) | 26, 116 |
| Hpy166II | GTNNAC | 2 cut(s) | 148, 264 |
| Hpy188I | TCNGA | 2 cut(s) | 39, 582 |
| Hpy188III | TCNNGA | 1 cut(s) | 428 |
| Hpy8I | GTNNAC | 2 cut(s) | 148, 264 |
| Hpy99I | CGWCG | 1 cut(s) | 438 |
| HpyCH4III | ACNGT | 1 cut(s) | 408 |
| HpyCH4V | TGCA | 4 cut(s) | 374, 379, 443, 473 |
| HpyF3I | CTNAG | 1 cut(s) | 581 |
| Hsp92I | GRCGYC | 1 cut(s) | 260 |
| Hsp92II | CATG | 2 cut(s) | 313, 551 |
| Kzo9I | GATC | 5 cut(s) | 121, 250, 367, 430, 446 |
| LpnPI | CCDG | 6 cut(s) | 102, 180, 322, 375, 397, 488 |
| Lsp1109I | GCAGC | 3 cut(s) | 227, 230, 527 |
| MaeI | CTAG | 3 cut(s) | 225, 428, 557 |
| MalI | GATC | 5 cut(s) | 123, 252, 369, 432, 448 |
| MboI | GATC | 5 cut(s) | 121, 250, 367, 430, 446 |
| MboII | GAAGA | 4 cut(s) | 76, 296, 304, 569 |
| MflI | RGATCY | 1 cut(s) | 250 |
| MhlI | GDGCHC | 1 cut(s) | 116 |
| MluCI | AATT | 2 cut(s) | 295, 561 |
| MnlI | CCTC | 1 cut(s) | 477 |
| MroXI | GAANNNNTTC | 1 cut(s) | 565 |
| MseI | TTAA | 2 cut(s) | 29, 525 |
| MslI | CAYNNNNRTG | 1 cut(s) | 314 |
| MspI | CCGG | 1 cut(s) | 167 |
| Mva1269I | GAATGC | 1 cut(s) | 174 |
| NdeII | GATC | 5 cut(s) | 121, 250, 367, 430, 446 |
| NlaIII | CATG | 2 cut(s) | 313, 551 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 442 |
| PctI | GAATGC | 1 cut(s) | 174 |
| PdmI | GAANNNNTTC | 1 cut(s) | 565 |
| PfeI | GAWTC | 4 cut(s) | 153, 271, 566, 593 |
| PkrI | GCNGC | 4 cut(s) | 217, 220, 347, 517 |
| PshBI | ATTAAT | 1 cut(s) | 29 |
| Psp124BI | GAGCTC | 1 cut(s) | 116 |
| PspPI | GGNCC | 1 cut(s) | 392 |
| PsuI | RGATCY | 1 cut(s) | 250 |
| RsaI | GTAC | 2 cut(s) | 574, 605 |
| RsaNI | GTAC | 2 cut(s) | 573, 604 |
| RseI | CAYNNNNRTG | 1 cut(s) | 314 |
| SacI | GAGCTC | 1 cut(s) | 116 |
| SaqAI | TTAA | 2 cut(s) | 29, 525 |
| SatI | GCNGC | 4 cut(s) | 216, 219, 346, 516 |
| Sau3AI | GATC | 5 cut(s) | 121, 250, 367, 430, 446 |
| Sau96I | GGNCC | 1 cut(s) | 392 |
| ScaI | AGTACT | 1 cut(s) | 574 |
| SduI | GDGCHC | 1 cut(s) | 116 |
| SetI | ASST | 6 cut(s) | 116, 143, 223, 504, 520, 611 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 314 |
| SmlI | CTYRAG | 2 cut(s) | 206, 497 |
| SmoI | CTYRAG | 2 cut(s) | 206, 497 |
| SpeI | ACTAGT | 1 cut(s) | 224 |
| Sse9I | AATT | 2 cut(s) | 295, 561 |
| SsiI | CCGC | 3 cut(s) | 241, 247, 346 |
| SspMI | CTAG | 3 cut(s) | 225, 428, 557 |
| SstI | GAGCTC | 1 cut(s) | 116 |
| TaaI | ACNGT | 1 cut(s) | 408 |
| TaqI | TCGA | 3 cut(s) | 25, 124, 299 |
| TasI | AATT | 2 cut(s) | 295, 561 |
| TatI | WGTACW | 2 cut(s) | 572, 603 |
| TauI | GCSGC | 1 cut(s) | 348 |
| TfiI | GAWTC | 4 cut(s) | 153, 271, 566, 593 |
| Tru1I | TTAA | 2 cut(s) | 29, 525 |
| Tru9I | TTAA | 2 cut(s) | 29, 525 |
| TscAI | CASTG | 1 cut(s) | 163 |
| TseI | GCWGC | 3 cut(s) | 215, 218, 515 |
| TspDTI | ATGAA | 4 cut(s) | 284, 298, 491, 564 |
| TspRI | CASTG | 1 cut(s) | 163 |
| VspI | ATTAAT | 1 cut(s) | 29 |
| XapI | RAATTY | 1 cut(s) | 295 |
| XbaI | TCTAGA | 1 cut(s) | 427 |
| XmiI | GTMKAC | 1 cut(s) | 263 |
| XmnI | GAANNNNTTC | 1 cut(s) | 565 |
| XspI | CTAG | 3 cut(s) | 225, 428, 557 |
| ZrmI | AGTACT | 1 cut(s) | 574 |