Rorug01G0277500

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000095
Physical Location & Seq
Reverse (-)
39048356 .. 39049218
863 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0277500.1

Sequence Viewer

Length: 774 bp
ATGACCCAAGAGCCACGAACTCTGCAACTAATGGAGCTCCAAACCCCGCAACAAATGGAACCACAACAACAGCAACCAACAGAGGAGGGAGGAAACACCCAAGCAGCTGGAAGTAGTGCCAACATGGATTTCTGGCGAAGCCGTACCAGGTGGATTCCTACTCCAGAACAAATAAGAATCCTCAAGGATCTTTACTATGTCAAGGGATTTAAGTGCCCAACTACAGAGCAGATTCACGAGATCTGTCTCCAGCTGAACCAGTATGGGCATGTTGAGGGTAAGAACATTTACTTTTGGTTCCAGAACGTCAGGGCTCGAGAGAAGCAGATGAATAGGTGTAATCAGGCTGCTCCAGTGCCCATGAGAACTAGTTCTCTTGGTACTGGTAGATCCATTGATCTCAATTTTGGGTCCACTGGTTCTACTGGTGCTGGTGGATCCATCGACATCAATTTTGGGCCAGCTGGTGGATCCATTGACATCAATTTTGGGTCCACTAGTTCTACTGATGATGGTAGATCCATTGATCTCAACTTTGGTTCCACCTATTCTACTGGAGGACAAACATCCCTGCAACAACGAGGAGGAGATCACCAGGAGGTTCAAACTCTTCCTCTGTTCCCCGTGCACGGCGAGGACGTCTTTGGTAACCTGAAGACTACTTCCGAGGAAGGTAGTGCACATGATTACTATTTCGGTGGCTCAGGCGGTTACAACCGTGGATCTCCAGTTTCTCTTGAGCTCAGCCTCAACCCATCCGGAGCTGCTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

257

Amino Acids

28.07

Weight (kDa)

5.14

Isoelectric Point (pI)

47.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 48 - 109 1e-09 Homeodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 642
AccB7I CCANNNNNTGG 1 cut(s) 467
AccIII TCCGGA 1 cut(s) 758
AciI CCGC 2 cut(s) 47, 708
AclWI GGATC 8 cut(s) 195, 384, 432, 445, 465, 478, 513, 730
AcuI CTGAAG 1 cut(s) 674
AcyI GRCGYC 1 cut(s) 639
AfaI GTAC 2 cut(s) 145, 382
AfiI CCNNNNNNNGG 2 cut(s) 467, 629
AgsI TTSAA 1 cut(s) 605
AhlI ACTAGT 2 cut(s) 368, 497
AjnI CCWGG 2 cut(s) 146, 594
AjuI GAANNNNNNNTTGG 2 cut(s) 113, 145
AluBI AGCT 6 cut(s) 37, 107, 253, 464, 742, 764
AluI AGCT 6 cut(s) 37, 107, 253, 464, 742, 764
Alw21I GWGCWC 4 cut(s) 39, 630, 682, 744
Alw26I GTCTC 1 cut(s) 251
Alw44I GTGCAC 2 cut(s) 626, 678
AlwI GGATC 8 cut(s) 195, 384, 432, 445, 465, 478, 513, 730
Ama87I CYCGRG 1 cut(s) 315
Aor13HI TCCGGA 1 cut(s) 758
AoxI GGCC 1 cut(s) 458
ApaLI GTGCAC 2 cut(s) 626, 678
ApeKI GCWGC 3 cut(s) 104, 347, 764
ArsI GACNNNNNNTTYG 4 cut(s) 437, 469, 470, 502
Asp700I GAANNNNTTC 1 cut(s) 370
AspS9I GGNCC 3 cut(s) 411, 458, 492
AsuHPI GGTGA 1 cut(s) 584
AvaI CYCGRG 1 cut(s) 315
AvaII GGWCC 2 cut(s) 411, 492
BaeGI GKGCMC 4 cut(s) 218, 360, 630, 682
BamHI GGATCC 2 cut(s) 437, 470
BanII GRGCYC 3 cut(s) 39, 316, 744
BauI CACGAG 1 cut(s) 236
BbsI GAAGAC 1 cut(s) 662
Bbv12I GWGCWC 4 cut(s) 39, 630, 682, 744
BbvI GCAGC 3 cut(s) 116, 334, 751
BccI CCATC 3 cut(s) 449, 506, 763
BceAI ACGGC 2 cut(s) 126, 646
BciT130I CCWGG 2 cut(s) 148, 596
BcoDI GTCTC 1 cut(s) 251
BcuI ACTAGT 2 cut(s) 368, 497
BfaI CTAG 3 cut(s) 369, 498, 772
BfmI CTRYAG 1 cut(s) 222
BglII AGATCT 1 cut(s) 240
BisI GCNGC 3 cut(s) 105, 348, 765
BlpI GCTNAGC 1 cut(s) 743
BlsI GCNGC 3 cut(s) 106, 349, 766
Bme1390I CCNGG 2 cut(s) 148, 596
Bme18I GGWCC 2 cut(s) 411, 492
BmeT110I CYCGRG 1 cut(s) 315
BmgT120I GGNCC 3 cut(s) 411, 458, 492
BmiI GGNNCC 7 cut(s) 60, 299, 412, 439, 472, 493, 541
BmrFI CCNGG 2 cut(s) 148, 596
BpiI GAAGAC 1 cut(s) 662
BpmI CTGGAG 5 cut(s) 147, 233, 336, 576, 711
Bpu10I CCTNAGC 1 cut(s) 703
Bpu1102I GCTNAGC 1 cut(s) 743
BpuEI CTTGAG 2 cut(s) 167, 758
BsaHI GRCGYC 1 cut(s) 639
BsaJI CCNNGG 2 cut(s) 666, 718
BsaWI WCCGGW 1 cut(s) 758
Bsc4I CCNNNNNNNGG 2 cut(s) 467, 629
Bse1I ACTGG 7 cut(s) 259, 353, 388, 421, 430, 559, 728
BseAI TCCGGA 1 cut(s) 758
BseBI CCWGG 2 cut(s) 148, 596
BseDI CCNNGG 2 cut(s) 666, 718
BseGI GGATG 2 cut(s) 566, 755
BseLI CCNNNNNNNGG 2 cut(s) 467, 629
BseMII CTCAG 2 cut(s) 717, 757
BseNI ACTGG 7 cut(s) 259, 353, 388, 421, 430, 559, 728
BseRI GAGGAG 3 cut(s) 98, 597, 600
BseSI GKGCMC 4 cut(s) 218, 360, 630, 682
BseXI GCAGC 3 cut(s) 116, 334, 751
BshFI GGCC 1 cut(s) 460
BsiHKAI GWGCWC 4 cut(s) 39, 630, 682, 744
BsiHKCI CYCGRG 1 cut(s) 315
BsiSI CCGG 1 cut(s) 759
BslI CCNNNNNNNGG 2 cut(s) 467, 629
BsmAI GTCTC 1 cut(s) 251
BsnI GGCC 1 cut(s) 460
BsoBI CYCGRG 1 cut(s) 315
Bsp1286I GDGCHC 7 cut(s) 39, 218, 316, 360, 630, 682, 744
Bsp13I TCCGGA 1 cut(s) 758
Bsp1720I GCTNAGC 1 cut(s) 743
BspACI CCGC 2 cut(s) 47, 708
BspANI GGCC 1 cut(s) 460
BspCNI CTCAG 2 cut(s) 716, 756
BspEI TCCGGA 1 cut(s) 758
BspLI GGNNCC 7 cut(s) 60, 299, 412, 439, 472, 493, 541
BspPI GGATC 8 cut(s) 195, 384, 432, 445, 465, 478, 513, 730
BsrI ACTGG 7 cut(s) 259, 353, 388, 421, 430, 559, 728
BssECI CCNNGG 2 cut(s) 666, 718
BssNI GRCGYC 1 cut(s) 639
BssSI CACGAG 1 cut(s) 236
Bst2BI CACGAG 1 cut(s) 236
Bst2UI CCWGG 2 cut(s) 148, 596
Bst4CI ACNGT 1 cut(s) 719
Bst6I CTCTTC 1 cut(s) 615
BstACI GRCGYC 1 cut(s) 639
BstC8I GCNNGC 1 cut(s) 462
BstDEI CTNAG 2 cut(s) 703, 743
BstDSI CCRYGG 1 cut(s) 718
BstEII GGTNACC 1 cut(s) 647
BstF5I GGATG 2 cut(s) 566, 755
BstMAI GTCTC 1 cut(s) 251
BstNI CCWGG 2 cut(s) 148, 596
BstNSI RCATGY 1 cut(s) 272
BstPI GGTNACC 1 cut(s) 647
BstSCI CCNGG 2 cut(s) 146, 594
BstSFI CTRYAG 1 cut(s) 222
BstSLI GKGCMC 4 cut(s) 218, 360, 630, 682
BstV1I GCAGC 3 cut(s) 116, 334, 751
BstV2I GAAGAC 1 cut(s) 662
BstX2I RGATCY 7 cut(s) 187, 240, 389, 437, 470, 518, 722
BstXI CCANNNNNNTGG 1 cut(s) 107
BstYI RGATCY 7 cut(s) 187, 240, 389, 437, 470, 518, 722
BsuRI GGCC 1 cut(s) 460
BtgI CCRYGG 1 cut(s) 718
BtsCI GGATG 2 cut(s) 566, 755
BtsIMutI CAGTG 2 cut(s) 360, 414
Cac8I GCNNGC 1 cut(s) 462
Cfr13I GGNCC 3 cut(s) 411, 458, 492
CsiI ACCWGGT 1 cut(s) 146
Csp6I GTAC 2 cut(s) 144, 381
CviAII CATG 4 cut(s) 124, 269, 361, 683
CviQI GTAC 2 cut(s) 144, 381
DdeI CTNAG 2 cut(s) 703, 743
Eam1104I CTCTTC 1 cut(s) 615
EarI CTCTTC 1 cut(s) 615
Ecl136II GAGCTC 2 cut(s) 37, 742
Eco24I GRGCYC 3 cut(s) 39, 316, 744
Eco47I GGWCC 2 cut(s) 411, 492
Eco53kI GAGCTC 2 cut(s) 37, 742
Eco57I CTGAAG 1 cut(s) 674
Eco88I CYCGRG 1 cut(s) 315
Eco91I GGTNACC 1 cut(s) 647
EcoICRI GAGCTC 2 cut(s) 37, 742
EcoO65I GGTNACC 1 cut(s) 647
EcoRII CCWGG 2 cut(s) 146, 594
EcoT38I GRGCYC 3 cut(s) 39, 316, 744
FaeI CATG 4 cut(s) 127, 272, 364, 686
FaiI YATR 6 cut(s) 125, 198, 264, 270, 362, 684
FatI CATG 4 cut(s) 123, 268, 360, 682
FauI CCCGC 1 cut(s) 54
Fnu4HI GCNGC 3 cut(s) 105, 348, 765
FokI GGATG 2 cut(s) 553, 742
FriOI GRGCYC 3 cut(s) 39, 316, 744
Fsp4HI GCNGC 3 cut(s) 105, 348, 765
FspBI CTAG 3 cut(s) 369, 498, 772
GluI GCNGC 3 cut(s) 105, 348, 765
GsuI CTGGAG 5 cut(s) 147, 233, 336, 576, 711
HaeIII GGCC 1 cut(s) 460
HapII CCGG 1 cut(s) 759
Hin1I GRCGYC 1 cut(s) 639
Hin1II CATG 4 cut(s) 127, 272, 364, 686
HinfI GANTC 3 cut(s) 154, 177, 232
HpaII CCGG 1 cut(s) 759
HphI GGTGA 1 cut(s) 584
Hpy166II GTNNAC 4 cut(s) 414, 495, 628, 680
Hpy188I TCNGA 1 cut(s) 667
Hpy188III TCNNGA 6 cut(s) 164, 236, 301, 317, 737, 759
Hpy8I GTNNAC 4 cut(s) 414, 495, 628, 680
HpyAV CCTTC 1 cut(s) 665
HpyCH4III ACNGT 1 cut(s) 719
HpyCH4IV ACGT 2 cut(s) 306, 639
HpyCH4V TGCA 4 cut(s) 25, 574, 628, 680
HpyF3I CTNAG 2 cut(s) 703, 743
HpySE526I ACGT 2 cut(s) 306, 639
Hsp92I GRCGYC 1 cut(s) 639
Hsp92II CATG 4 cut(s) 127, 272, 364, 686
Kpn2I TCCGGA 1 cut(s) 758
LmnI GCTCC 4 cut(s) 34, 42, 355, 761
Lsp1109I GCAGC 3 cut(s) 116, 334, 751
MabI ACCWGGT 1 cut(s) 146
MaeI CTAG 3 cut(s) 369, 498, 772
MaeII ACGT 2 cut(s) 306, 639
MaeIII GTNAC 2 cut(s) 647, 710
MboII GAAGA 2 cut(s) 602, 667
MflI RGATCY 7 cut(s) 187, 240, 389, 437, 470, 518, 722
MhlI GDGCHC 7 cut(s) 39, 218, 316, 360, 630, 682, 744
MluCI AATT 3 cut(s) 403, 451, 484
MroI TCCGGA 1 cut(s) 758
MroXI GAANNNNTTC 1 cut(s) 370
MseI TTAA 1 cut(s) 210
MspA1I CMGCKG 3 cut(s) 107, 253, 464
MspI CCGG 1 cut(s) 759
MspR9I CCNGG 2 cut(s) 148, 596
MvaI CCWGG 2 cut(s) 148, 596
NlaIII CATG 4 cut(s) 127, 272, 364, 686
NlaIV GGNNCC 7 cut(s) 60, 299, 412, 439, 472, 493, 541
NspI RCATGY 1 cut(s) 272
PaeR7I CTCGAG 1 cut(s) 315
PcsI WCGNNNNNNNCGW 1 cut(s) 636
PdmI GAANNNNTTC 1 cut(s) 370
PfeI GAWTC 3 cut(s) 154, 177, 232
PflMI CCANNNNNTGG 1 cut(s) 467
PkrI GCNGC 3 cut(s) 106, 349, 766
Psp124BI GAGCTC 2 cut(s) 39, 744
Psp6I CCWGG 2 cut(s) 146, 594
PspEI GGTNACC 1 cut(s) 647
PspGI CCWGG 2 cut(s) 146, 594
PspN4I GGNNCC 7 cut(s) 60, 299, 412, 439, 472, 493, 541
PspPI GGNCC 3 cut(s) 411, 458, 492
PsuI RGATCY 7 cut(s) 187, 240, 389, 437, 470, 518, 722
PvuII CAGCTG 3 cut(s) 107, 253, 464
RsaI GTAC 2 cut(s) 145, 382
RsaNI GTAC 2 cut(s) 144, 381
SacI GAGCTC 2 cut(s) 39, 744
SaqAI TTAA 1 cut(s) 210
SatI GCNGC 3 cut(s) 105, 348, 765
Sau96I GGNCC 3 cut(s) 411, 458, 492
ScrFI CCNGG 2 cut(s) 148, 596
SduI GDGCHC 7 cut(s) 39, 218, 316, 360, 630, 682, 744
SexAI ACCWGGT 1 cut(s) 146
SfcI CTRYAG 1 cut(s) 222
Sfr274I CTCGAG 1 cut(s) 315
SinI GGWCC 2 cut(s) 411, 492
SlaI CTCGAG 1 cut(s) 315
SmlI CTYRAG 3 cut(s) 182, 315, 737
SmoI CTYRAG 3 cut(s) 182, 315, 737
SpeI ACTAGT 2 cut(s) 368, 497
Sse9I AATT 3 cut(s) 403, 451, 484
SsiI CCGC 2 cut(s) 47, 708
SspMI CTAG 3 cut(s) 369, 498, 772
SstI GAGCTC 2 cut(s) 39, 744
StyD4I CCNGG 2 cut(s) 146, 594
TaaI ACNGT 1 cut(s) 719
TaiI ACGT 2 cut(s) 309, 642
TaqI TCGA 2 cut(s) 316, 444
TasI AATT 3 cut(s) 403, 451, 484
TfiI GAWTC 3 cut(s) 154, 177, 232
Tru1I TTAA 1 cut(s) 210
Tru9I TTAA 1 cut(s) 210
TscAI CASTG 2 cut(s) 360, 421
TseI GCWGC 3 cut(s) 104, 347, 764
TspDTI ATGAA 1 cut(s) 344
TspRI CASTG 2 cut(s) 360, 421
Van91I CCANNNNNTGG 1 cut(s) 467
VneI GTGCAC 2 cut(s) 626, 678
VpaK11BI GGWCC 2 cut(s) 411, 492
XceI RCATGY 1 cut(s) 272
XhoI CTCGAG 1 cut(s) 315
XmnI GAANNNNTTC 1 cut(s) 370
XspI CTAG 3 cut(s) 369, 498, 772
ZraI GACGTC 1 cut(s) 640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.