RLG00000029809

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000095
Physical Location & Seq
Reverse (-)
49535399 .. 49538655
3257 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029809

Sequence Viewer

Length: 1422 bp
ATGGCTATGACGATGAGGAAAAGGCATAAACGTGGGTACAACGACACAGTGGATAAAATCGGTGGATTGCCAGATGAAATTCTTGTTAGTATATTGTCTCTGTTGCCGTTAAAGGAAGCAGCAGCTACTAGTATCCTTTCTAGGCGATGGCGGCATCTTTGGACATCTACCTCGACTCTCACCTTTGATTCTGATGTTATGTTGTATTTTGACCCAACCAAAAGTTTCAAGTCGGAAACCTCAAAGTACATCAATTGGGTGGACAGTGTGATGGAACAACATAGAGTCCCGAACATTGAGCACCTCAAGATTTCGTTTGATCTAGATAAAAGTTGTGCAGTTTGCATTAATAAGTGGATTCGAATTGCATTGAAGAAACGAGTTCAGATTCTTGAGTTGGACTTGTTAGAATGGGGTTGCTTTTTTCAACAGGATAGGCAGTGTTATAAACTTCCCCGTCGACTTTTACACTCTAATCGTGATTACATTGGCTCCCTCAAAGTCCTTGACTTCAAATCTGTTGCTGTGGATGGAAGAATTCTTGAATACCTGCTTTCTAGCTGTCCGCTCCTTGAACGATTATCAGTTTATGACTCCCAAAAGTTGGTTAATCTAAGAGTTGTGGGTCAGTCAATTGCATTGAAGTATTTATCAATTGAACGATGTTACAAAATCAAAAGCATTGAGATTTGTGATGCCCCGAAGCTTGTTTCACTGATTTATCATGGAGAATGTGGAGGAGAAAACGTAAACTCGTTTCTGATTAGGAATGTCCCGCTTCTAGTGGAAGTATCCATTCTTACAGAATGGATGGAGAGTTTCTTCAAGGCTGGTTGTCTTTCTCAATTGAAGATTCTCAGACTGTACTCTTCAATGGTTGGTATATGTAATAACTCTGTTGGTTTTCTTTCGTTTTGTTGGAATATGTTAGTCCCTTACTCCTTTTGTTTTCAGCGATATGAGAAGTACCTTCAATTTCCTACATTAGCAAATCTCAAGTACTTGGAATTAAGAGTTATAGCACATGATCAGTGCAGCCTTCTTCAGTTAACTTCTGTAATGAAGGCATGTCCTTACTTGCACAGATTTGTGTTGCAGTTGAGACACTTTACACCGGCCTTTGGAGGAAGTTTGATAAAGATGAAAGCTTCCAAATCCCCCCACTATTACCTCAAGGTAGTGGAAATAGCAGGGTATCGTGGTCAGACAAGTGATTATGAATATGTCAAGTACTTCATAGAGAGTGCGGTTGAGCTGGAGAAACTTATTATCAATCCTGTTAAGTGGACTCCGTATATAGGTGACAGAAACAGAATCCCTAAGAGTATTAGTGAAGTCAAGATGGAAGACGAGGCAAGAGCTCATGCGAGGCAACACCTTAGAGAAAATGTTCCTTCAAATATAGAATTTGTATGCATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

474

Amino Acids

54.87

Weight (kDa)

9.06

Isoelectric Point (pI)

46.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 21 - 53 5.3e-06 F-box-like
F-box PF00646 22 - 57 3.4e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 90 - 244 1.3e-11 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 164 - 263 9e-09 FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1 PF23622 329 - 470 2e-08 At1g61320/AtMIF1, LRR domain
FBD PF08387 391 - 424 5.6e-06 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 447
Acc36I ACCTGC 1 cut(s) 558
AccB7I CCANNNNNTGG 1 cut(s) 604
AccBSI CCGCTC 1 cut(s) 568
AccI GTMKAC 1 cut(s) 460
AciI CCGC 4 cut(s) 151, 566, 776, 1247
AcsI RAATTY 3 cut(s) 78, 537, 1406
AcuI CTGAAG 1 cut(s) 1028
AfaI GTAC 6 cut(s) 38, 248, 866, 968, 1001, 1232
AfiI CCNNNNNNNGG 3 cut(s) 604, 1121, 1298
AhlI ACTAGT 1 cut(s) 128
AluBI AGCT 6 cut(s) 125, 561, 706, 1148, 1255, 1361
AluI AGCT 6 cut(s) 125, 561, 706, 1148, 1255, 1361
Alw21I GWGCWC 2 cut(s) 303, 1363
Alw26I GTCTC 2 cut(s) 102, 1096
AoxI GGCC 1 cut(s) 1116
ApeKI GCWGC 3 cut(s) 119, 122, 1035
ApoI RAATTY 3 cut(s) 78, 537, 1406
AseI ATTAAT 1 cut(s) 348
Asp700I GAANNNNTTC 1 cut(s) 1389
AsuHPI GGTGA 2 cut(s) 172, 1313
AsuII TTCGAA 1 cut(s) 361
BanII GRGCYC 1 cut(s) 1363
BbsI GAAGAC 1 cut(s) 1353
Bbv12I GWGCWC 2 cut(s) 303, 1363
BbvI GCAGC 3 cut(s) 131, 134, 1047
BccI CCATC 5 cut(s) 141, 265, 524, 805, 1336
BceAI ACGGC 1 cut(s) 91
BciVI GTATCC 2 cut(s) 143, 802
BclI TGATCA 1 cut(s) 1027
BcoDI GTCTC 2 cut(s) 102, 1096
BcuI ACTAGT 1 cut(s) 128
BfaI CTAG 5 cut(s) 129, 141, 323, 558, 782
BfuAI ACCTGC 1 cut(s) 558
BfuI GTATCC 2 cut(s) 143, 802
BisI GCNGC 4 cut(s) 120, 123, 152, 1036
BlsI GCNGC 4 cut(s) 121, 124, 153, 1037
BmcAI AGTACT 2 cut(s) 1001, 1232
BmiI GGNNCC 1 cut(s) 493
BmsI GCATC 2 cut(s) 163, 685
BpiI GAAGAC 1 cut(s) 1353
BpmI CTGGAG 1 cut(s) 1277
Bpu14I TTCGAA 1 cut(s) 361
BpuEI CTTGAG 4 cut(s) 290, 413, 980, 1157
BsaXI ACNNNNNCTCC 4 cut(s) 476, 506, 732, 762
Bsc4I CCNNNNNNNGG 3 cut(s) 604, 1121, 1298
Bse118I RCCGGY 1 cut(s) 1114
BseGI GGATG 2 cut(s) 535, 816
BseLI CCNNNNNNNGG 3 cut(s) 604, 1121, 1298
BseMII CTCAG 1 cut(s) 871
BseRI GAGGAG 1 cut(s) 753
BseXI GCAGC 3 cut(s) 131, 134, 1047
BsgI GTGCAG 2 cut(s) 357, 1054
BshFI GGCC 1 cut(s) 1118
BsiHKAI GWGCWC 2 cut(s) 303, 1363
BsiSI CCGG 1 cut(s) 1115
BslFI GGGAC 3 cut(s) 272, 758, 917
BslI CCNNNNNNNGG 3 cut(s) 604, 1121, 1298
BsmAI GTCTC 2 cut(s) 102, 1096
BsmFI GGGAC 3 cut(s) 272, 758, 917
BsnI GGCC 1 cut(s) 1118
Bsp119I TTCGAA 1 cut(s) 361
Bsp1286I GDGCHC 2 cut(s) 303, 1363
Bsp143I GATC 2 cut(s) 319, 1027
BspACI CCGC 4 cut(s) 151, 566, 776, 1247
BspANI GGCC 1 cut(s) 1118
BspCNI CTCAG 1 cut(s) 870
BspLI GGNNCC 1 cut(s) 493
BspMI ACCTGC 1 cut(s) 558
BspT104I TTCGAA 1 cut(s) 361
BsrBI CCGCTC 1 cut(s) 568
BsrFI RCCGGY 1 cut(s) 1114
BssAI RCCGGY 1 cut(s) 1114
BssMI GATC 2 cut(s) 319, 1027
Bst4CI ACNGT 3 cut(s) 49, 266, 864
Bst6I CTCTTC 1 cut(s) 874
BstBI TTCGAA 1 cut(s) 361
BstDEI CTNAG 4 cut(s) 614, 857, 1320, 1379
BstF5I GGATG 2 cut(s) 535, 816
BstKTI GATC 2 cut(s) 322, 1030
BstMAI GTCTC 2 cut(s) 102, 1096
BstMBI GATC 2 cut(s) 319, 1027
BstMWI GCNNNNNNNGC 1 cut(s) 151
BstNSI RCATGY 1 cut(s) 1071
BstV1I GCAGC 3 cut(s) 131, 134, 1047
BstV2I GAAGAC 1 cut(s) 1353
BsuI GTATCC 2 cut(s) 143, 802
BsuRI GGCC 1 cut(s) 1118
BtgZI GCGATG 1 cut(s) 160
BtsCI GGATG 2 cut(s) 535, 816
BtsI GCAGTG 1 cut(s) 446
BtsIMutI CAGTG 5 cut(s) 54, 271, 446, 713, 1037
BveI ACCTGC 1 cut(s) 558
Cfr10I RCCGGY 1 cut(s) 1114
Csp6I GTAC 6 cut(s) 37, 247, 865, 967, 1000, 1231
CviAII CATG 4 cut(s) 725, 1025, 1068, 1364
CviQI GTAC 6 cut(s) 37, 247, 865, 967, 1000, 1231
DdeI CTNAG 4 cut(s) 614, 857, 1320, 1379
DpnI GATC 2 cut(s) 321, 1029
DpnII GATC 2 cut(s) 319, 1027
Eam1104I CTCTTC 1 cut(s) 874
EarI CTCTTC 1 cut(s) 874
Ecl136II GAGCTC 1 cut(s) 1361
Eco24I GRGCYC 1 cut(s) 1363
Eco53kI GAGCTC 1 cut(s) 1361
Eco57I CTGAAG 1 cut(s) 1028
EcoICRI GAGCTC 1 cut(s) 1361
EcoRI GAATTC 1 cut(s) 537
EcoT22I ATGCAT 1 cut(s) 1418
EcoT38I GRGCYC 1 cut(s) 1363
FaeI CATG 4 cut(s) 728, 1028, 1071, 1367
FaqI GGGAC 3 cut(s) 272, 758, 917
FatI CATG 4 cut(s) 724, 1024, 1067, 1363
FauI CCCGC 1 cut(s) 783
FbaI TGATCA 1 cut(s) 1027
FblI GTMKAC 1 cut(s) 460
Fnu4HI GCNGC 4 cut(s) 120, 123, 152, 1036
FokI GGATG 2 cut(s) 542, 823
FriOI GRGCYC 1 cut(s) 1363
Fsp4HI GCNGC 4 cut(s) 120, 123, 152, 1036
FspBI CTAG 5 cut(s) 129, 141, 323, 558, 782
GluI GCNGC 4 cut(s) 120, 123, 152, 1036
GsuI CTGGAG 1 cut(s) 1277
HaeIII GGCC 1 cut(s) 1118
HapII CCGG 1 cut(s) 1115
Hin1II CATG 4 cut(s) 728, 1028, 1071, 1367
HincII GTYRAC 2 cut(s) 461, 1050
HindII GTYRAC 2 cut(s) 461, 1050
HindIII AAGCTT 2 cut(s) 704, 1146
HinfI GANTC 9 cut(s) 175, 188, 285, 358, 388, 593, 853, 1288, 1314
HpaI GTTAAC 1 cut(s) 1050
HpaII CCGG 1 cut(s) 1115
HphI GGTGA 2 cut(s) 172, 1313
Hpy166II GTNNAC 5 cut(s) 262, 461, 751, 1050, 1287
Hpy188I TCNGA 6 cut(s) 193, 235, 387, 762, 860, 1206
Hpy188III TCNNGA 7 cut(s) 289, 307, 323, 392, 479, 542, 1339
Hpy8I GTNNAC 5 cut(s) 262, 461, 751, 1050, 1287
Hpy99I CGWCG 1 cut(s) 462
HpyAV CCTTC 4 cut(s) 980, 1049, 1057, 1404
HpyCH4III ACNGT 3 cut(s) 49, 266, 864
HpyCH4IV ACGT 2 cut(s) 31, 747
HpyCH4V TGCA 8 cut(s) 338, 345, 368, 638, 1035, 1081, 1096, 1416
HpyF10VI GCNNNNNNNGC 1 cut(s) 151
HpyF3I CTNAG 4 cut(s) 614, 857, 1320, 1379
HpySE526I ACGT 2 cut(s) 31, 747
Hsp92II CATG 4 cut(s) 728, 1028, 1071, 1367
Ksp22I TGATCA 1 cut(s) 1027
KspAI GTTAAC 1 cut(s) 1050
Kzo9I GATC 2 cut(s) 319, 1027
LmnI GCTCC 2 cut(s) 497, 573
LpnPI CCDG 8 cut(s) 84, 416, 563, 816, 1128, 1176, 1241, 1290
Lsp1109I GCAGC 3 cut(s) 131, 134, 1047
LweI GCATC 2 cut(s) 163, 685
MaeI CTAG 5 cut(s) 129, 141, 323, 558, 782
MaeII ACGT 2 cut(s) 31, 747
MaeIII GTNAC 2 cut(s) 665, 1301
MalI GATC 2 cut(s) 321, 1029
MbiI CCGCTC 1 cut(s) 568
MboI GATC 2 cut(s) 319, 1027
MboII GAAGA 7 cut(s) 385, 546, 814, 861, 862, 1034, 1358
MfeI CAATTG 4 cut(s) 253, 633, 654, 845
MhlI GDGCHC 2 cut(s) 303, 1363
MlyI GAGTC 4 cut(s) 169, 294, 587, 1282
MmeI TCCRAC 3 cut(s) 213, 378, 899
Mph1103I ATGCAT 1 cut(s) 1418
MroXI GAANNNNTTC 1 cut(s) 1389
MseI TTAA 6 cut(s) 110, 348, 609, 1010, 1049, 1281
MslI CAYNNNNRTG 1 cut(s) 30
MspI CCGG 1 cut(s) 1115
MunI CAATTG 4 cut(s) 253, 633, 654, 845
MwoI GCNNNNNNNGC 1 cut(s) 151
NdeII GATC 2 cut(s) 319, 1027
NlaIII CATG 4 cut(s) 728, 1028, 1071, 1367
NlaIV GGNNCC 1 cut(s) 493
NmuCI GTSAC 1 cut(s) 1301
NsiI ATGCAT 1 cut(s) 1418
NspI RCATGY 1 cut(s) 1071
NspV TTCGAA 1 cut(s) 361
PdmI GAANNNNTTC 1 cut(s) 1389
PfeI GAWTC 5 cut(s) 188, 358, 388, 853, 1314
PflMI CCANNNNNTGG 1 cut(s) 604
PkrI GCNGC 4 cut(s) 121, 124, 153, 1037
PleI GAGTC 4 cut(s) 169, 293, 587, 1282
PpsI GAGTC 4 cut(s) 169, 293, 587, 1282
PshBI ATTAAT 1 cut(s) 348
PsiI TTATAA 1 cut(s) 447
Psp124BI GAGCTC 1 cut(s) 1363
PspN4I GGNNCC 1 cut(s) 493
RsaI GTAC 6 cut(s) 38, 248, 866, 968, 1001, 1232
RsaNI GTAC 6 cut(s) 37, 247, 865, 967, 1000, 1231
RseI CAYNNNNRTG 1 cut(s) 30
SacI GAGCTC 1 cut(s) 1363
SalI GTCGAC 1 cut(s) 459
SaqAI TTAA 6 cut(s) 110, 348, 609, 1010, 1049, 1281
SatI GCNGC 4 cut(s) 120, 123, 152, 1036
Sau3AI GATC 2 cut(s) 319, 1027
ScaI AGTACT 2 cut(s) 1001, 1232
SchI GAGTC 4 cut(s) 169, 294, 587, 1282
SduI GDGCHC 2 cut(s) 303, 1363
SfaNI GCATC 2 cut(s) 163, 685
SfuI TTCGAA 1 cut(s) 361
SmiMI CAYNNNNRTG 1 cut(s) 30
SmlI CTYRAG 4 cut(s) 305, 392, 995, 1172
SmoI CTYRAG 4 cut(s) 305, 392, 995, 1172
SpeI ACTAGT 1 cut(s) 128
SsiI CCGC 4 cut(s) 151, 566, 776, 1247
SspMI CTAG 5 cut(s) 129, 141, 323, 558, 782
SstI GAGCTC 1 cut(s) 1363
TaaI ACNGT 3 cut(s) 49, 266, 864
TaiI ACGT 2 cut(s) 34, 750
TaqI TCGA 3 cut(s) 173, 361, 460
TatI WGTACW 4 cut(s) 246, 864, 999, 1230
TauI GCSGC 1 cut(s) 154
TfiI GAWTC 5 cut(s) 188, 358, 388, 853, 1314
Tru1I TTAA 6 cut(s) 110, 348, 609, 1010, 1049, 1281
Tru9I TTAA 6 cut(s) 110, 348, 609, 1010, 1049, 1281
TscAI CASTG 5 cut(s) 54, 271, 446, 720, 1037
TseFI GTSAC 1 cut(s) 1301
TseI GCWGC 3 cut(s) 119, 122, 1035
Tsp45I GTSAC 1 cut(s) 1301
TspDTI ATGAA 5 cut(s) 90, 1076, 1157, 1225, 1233
TspGWI ACGGA 1 cut(s) 1281
TspRI CASTG 5 cut(s) 54, 271, 446, 720, 1037
Van91I CCANNNNNTGG 1 cut(s) 604
VspI ATTAAT 1 cut(s) 348
XapI RAATTY 3 cut(s) 78, 537, 1406
XbaI TCTAGA 1 cut(s) 322
XceI RCATGY 1 cut(s) 1071
XmiI GTMKAC 1 cut(s) 460
XmnI GAANNNNTTC 1 cut(s) 1389
XspI CTAG 5 cut(s) 129, 141, 323, 558, 782
ZrmI AGTACT 2 cut(s) 1001, 1232
Zsp2I ATGCAT 1 cut(s) 1418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.