Rmu_sc0012217.1_g000006

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012217.1
OG0000095
Physical Location & Seq
Reverse (-)
10719 .. 19136
8418 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012217.1_g000006.1.cds

Sequence Viewer

Length: 2526 bp
atgaggggaagagaaagaaaaagaaaagcaaagggtgattatgacttggtagaccgaatcagtgcgttgcctgatgaacttctctccattatagtccattccatgcctgttaaggaagcggcagctactagtattctttccaggcgatggaagtatatatggaaatcttcaacaaatctcgacttttctgatgctaggtttattgttggtaaaggttttcgcgggttccttcaacaacgacgacatgataatcatcaaaatagccagagatatgtcaattcggtaaatcgtgcgattgaacaatatagtaacccaaccgtcgaacgattcagggcttgctttattatagatcctcggtatacaggggacattgttaattggcttcaatttgctatgaataagaaagtcgaaatattggagttagagttctacatagattctggtttgacatatacgtatcctatatatccttttccccacaaactgttaggtattggagaaaagtctgagctccagaactcgtattcttccgaccctccaagtcatcaatcttgtggatacaacattggatttaagttcctcaaagttctccattttcgttgtgttgatgtgactcgagaagtccttgagtacttcttgtctaactgtgcagctcttgaacgattaactgtgaatgctgctcacaatttggtggatctgagagttggtggcccctcgattgccttgaagcatttaacgttaatagattgttctcgcctcgaaagtattgaggtttgtgatgcaaagcttgtctctttccatctttctgggagagaggtgaaaagactgcttctcactagagtaccgttgcttgttgaggtatcccacatgaccacagtgagttcaataaggcttctcctcacccaactttcattttgtatttcccagttagagattctcagtttagatataaatggaggggactacaattgggatcatgtatttcctatattatcaaatctcaggcatttagaattaaaatttgattcagactgtgagagtgatctttgtaattttactcgtttcattgaggcatctccccacttgcatagacttgtgttgaagttgcagaactgtacgcgtacgaagcctgaaatatgcaggaagagaggtagaattgccaaattcccccgtcattacctcaaggtagtagagatagtagggtatcgtgggagtcattgtcatgttcaacatgcactatactttgtaaagaaggctgtcgtattggagaaaattgttattgatcctgtccgacgttggggtgcttggctcgatagagattttaaagaagtggaagaggaaaacgacgcaagatatcatgctaatcgtcatctcagaagaaaagtgccttcaacagttgaatttagcaagttcacccgttgggtcactaggtcagggtcaccaggtcaccaggtcaccagggcaggacactattcactgccactggacctttgcttccacccgttggggtcaggcctgggtcacgggctcagtcaccctcctccccgagttcgtgacctgggcctcccactgtggttttgccccaagcccggtggaatcatgaatagtggagctgggtcaccatttctgctgcttttgacgtggtgcccgggcaataggatgcccggtgaacttgcccctagagccaccttcgcgacgttgtcttcgtgcgcggagacggtgagaatatactccgacttgtcttcgttcggttcggcttcgactgagaaaggtgatggagatggaatcgacaacagaaaaagcgatggcgttgagcaaggttccagtcgccaacgtgatggtggagaggagtgtttcgcaggagagagagagagaggcagaggagagaatcagagatctggttccagttcgcatcatgcatcagagatccagttcttgtgtcggagatccagttgtgaaacggaggacagagagagcacagtgcaggaggttcgtcggagtgaagatttggtttgcttttatatagattacccgtttacgaatgacattgatagatgggttcgttttgctatgaataagagtgttcaaattctggagttggagttttacacagactccggtctcggagaagagtctccaagtctacactatagtgggcaccatattggatttaagttcctcaaagttctccatttccgacgtgttgatgtgactcgagaagttcttgagttcttcttgtctgactgtccagttcttgaacgattgactgtgaatgctgctaccaatttggagggtctaagagttgttggttcctcaattgctttgaagcatttagtgttaatagattgttttctccttgacagcatcgaggttcgtgatgcaaatttggtttctttatacttttccggaatagagctgaacaacgtgcatctcactaatgcaccgttccttgttgaagtatcctacattaccttgatgagatccatagagcttcccttcgagcaactttcaagttgtctttcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

841

Amino Acids

95.81

Weight (kDa)

8.1

Isoelectric Point (pI)

49.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1644, 2157
AccB7I CCANNNNNTGG 2 cut(s) 147, 1504
AccI GTMKAC 3 cut(s) 51, 359, 2143
AccII CGCG 4 cut(s) 222, 1120, 1694, 1712
AccIII TCCGGA 1 cut(s) 2405
AciI CCGC 3 cut(s) 119, 222, 1712
AclI AACGTT 1 cut(s) 737
AclWI GGATC 7 cut(s) 344, 702, 981, 1277, 1921, 1941, 2475
AcsI RAATTY 5 cut(s) 1019, 1163, 1400, 2088, 2383
AfaI GTAC 4 cut(s) 632, 843, 1117, 1123
AfiI CCNNNNNNNGG 4 cut(s) 147, 1297, 1504, 1589
AflIII ACRYGT 2 cut(s) 1118, 2200
AhlI ACTAGT 1 cut(s) 128
AjiI CACGTC 2 cut(s) 1641, 2201
AjnI CCWGG 6 cut(s) 140, 1441, 1449, 1457, 1515, 1557
AleI CACNNNNGTG 1 cut(s) 2151
AloI GAACNNNNNNTCC 2 cut(s) 410, 442
AluBI AGCT 7 cut(s) 125, 511, 653, 787, 1613, 2416, 2491
AluI AGCT 7 cut(s) 125, 511, 653, 787, 1613, 2416, 2491
Alw21I GWGCWC 2 cut(s) 513, 1979
Alw26I GTCTC 4 cut(s) 796, 1709, 2126, 2139
AlwI GGATC 7 cut(s) 344, 702, 981, 1277, 1921, 1941, 2475
Ama87I CYCGRG 4 cut(s) 615, 1545, 1648, 2214
Aor13HI TCCGGA 1 cut(s) 2405
AoxI GGCC 3 cut(s) 709, 1513, 1561
ApeKI GCWGC 5 cut(s) 122, 650, 677, 1630, 2276
ApoI RAATTY 5 cut(s) 1019, 1163, 1400, 2088, 2383
ArsI GACNNNNNNTTYG 2 cut(s) 1687, 1719
AspLEI GCGC 1 cut(s) 1712
AspS9I GGNCC 3 cut(s) 710, 1486, 1561
AsuC2I CCSGG 4 cut(s) 1590, 1649, 1650, 1665
AvaI CYCGRG 4 cut(s) 615, 1545, 1648, 2214
AvaII GGWCC 1 cut(s) 1486
BaeGI GKGCMC 2 cut(s) 1649, 2160
BaeI ACNNNNGTAYC 2 cut(s) 825, 858
BanI GGYRCC 2 cut(s) 1644, 2157
BanII GRGCYC 2 cut(s) 513, 1530
BbsI GAAGAC 2 cut(s) 1695, 1734
Bbv12I GWGCWC 2 cut(s) 513, 1979
BbvI GCAGC 5 cut(s) 134, 662, 664, 1617, 2263
BccI CCATC 7 cut(s) 141, 807, 1769, 1775, 1799, 1832, 2049
BcgI CGANNNNNNTGC 2 cut(s) 1973, 2007
BciT130I CCWGG 6 cut(s) 142, 1443, 1451, 1459, 1517, 1559
BciVI GTATCC 4 cut(s) 468, 551, 871, 2470
BcnI CCSGG 4 cut(s) 1590, 1649, 1650, 1665
BcoDI GTCTC 4 cut(s) 796, 1709, 2126, 2139
BcuI ACTAGT 1 cut(s) 128
BfaI CTAG 5 cut(s) 129, 195, 837, 1428, 1680
BfmI CTRYAG 1 cut(s) 2149
BfuI GTATCC 4 cut(s) 468, 551, 871, 2470
BglII AGATCT 1 cut(s) 1895
BisI GCNGC 6 cut(s) 120, 123, 651, 678, 1631, 2277
BlsI GCNGC 6 cut(s) 121, 124, 652, 679, 1632, 2278
BmcAI AGTACT 1 cut(s) 632
Bme18I GGWCC 1 cut(s) 1486
BmeT110I CYCGRG 4 cut(s) 615, 1545, 1648, 2214
BmgBI CACGTC 2 cut(s) 1641, 2201
BmgT120I GGNCC 3 cut(s) 710, 1486, 1561
BmiI GGNNCC 7 cut(s) 227, 712, 1646, 1822, 1903, 2159, 2311
BmrI ACTGGG 1 cut(s) 919
BmsI GCATC 9 cut(s) 181, 769, 1082, 1650, 1921, 1928, 2368, 2373, 2437
BmuI ACTGGG 1 cut(s) 919
BoxI GACNNNNGTC 1 cut(s) 2118
BpiI GAAGAC 2 cut(s) 1695, 1734
BpmI CTGGAG 2 cut(s) 497, 2114
BpuEI CTTGAG 3 cut(s) 647, 1166, 2246
BpuMI CCSGG 4 cut(s) 1590, 1649, 1650, 1665
BsaAI YACGTR 1 cut(s) 456
BsaBI GATNNNNATC 1 cut(s) 252
BsaI GGTCTC 1 cut(s) 2126
BsaJI CCNNGG 5 cut(s) 353, 1458, 1516, 1558, 1648
BsaWI WCCGGW 2 cut(s) 2117, 2405
Bsc4I CCNNNNNNNGG 4 cut(s) 147, 1297, 1504, 1589
Bse1I ACTGG 7 cut(s) 925, 1488, 1824, 1905, 1930, 1950, 2249
Bse8I GATNNNNATC 1 cut(s) 252
BseAI TCCGGA 1 cut(s) 2405
BseBI CCWGG 6 cut(s) 142, 1443, 1451, 1459, 1517, 1559
BseDI CCNNGG 5 cut(s) 353, 1458, 1516, 1558, 1648
BseGI GGATG 1 cut(s) 1665
BseJI GATNNNNATC 1 cut(s) 252
BseLI CCNNNNNNNGG 4 cut(s) 147, 1297, 1504, 1589
BseMII CTCAG 7 cut(s) 498, 689, 952, 1015, 1387, 1543, 1755
BseNI ACTGG 7 cut(s) 925, 1488, 1824, 1905, 1930, 1950, 2249
BseRI GAGGAG 4 cut(s) 887, 1530, 1862, 1896
BseSI GKGCMC 2 cut(s) 1649, 2160
BseXI GCAGC 5 cut(s) 134, 662, 664, 1617, 2263
BseYI CCCAGC 1 cut(s) 1613
BsgI GTGCAG 2 cut(s) 669, 2003
Bsh1236I CGCG 4 cut(s) 222, 1120, 1694, 1712
BshFI GGCC 3 cut(s) 711, 1515, 1563
BshNI GGYRCC 2 cut(s) 1644, 2157
BsiHKAI GWGCWC 2 cut(s) 513, 1979
BsiHKCI CYCGRG 4 cut(s) 615, 1545, 1648, 2214
BsiSI CCGG 5 cut(s) 1590, 1649, 1665, 2118, 2406
BsiWI CGTACG 1 cut(s) 1121
BslFI GGGAC 2 cut(s) 380, 974
BslI CCNNNNNNNGG 4 cut(s) 147, 1297, 1504, 1589
BsmAI GTCTC 4 cut(s) 796, 1709, 2126, 2139
BsmBI CGTCTC 1 cut(s) 1709
BsmFI GGGAC 2 cut(s) 380, 974
BsmI GAATGC 2 cut(s) 679, 2278
BsnI GGCC 3 cut(s) 711, 1515, 1563
Bso31I GGTCTC 1 cut(s) 2126
BsoBI CYCGRG 4 cut(s) 615, 1545, 1648, 2214
Bsp1286I GDGCHC 5 cut(s) 513, 1530, 1649, 1979, 2160
Bsp13I TCCGGA 1 cut(s) 2405
Bsp143I GATC 9 cut(s) 349, 694, 973, 1042, 1282, 1895, 1926, 1946, 2480
Bsp68I TCGCGA 1 cut(s) 1694
BspACI CCGC 3 cut(s) 119, 222, 1712
BspANI GGCC 3 cut(s) 711, 1515, 1563
BspCNI CTCAG 7 cut(s) 499, 690, 951, 1014, 1386, 1542, 1756
BspEI TCCGGA 1 cut(s) 2405
BspFNI CGCG 4 cut(s) 222, 1120, 1694, 1712
BspHI TCATGA 1 cut(s) 1599
BspLI GGNNCC 7 cut(s) 227, 712, 1646, 1822, 1903, 2159, 2311
BspPI GGATC 7 cut(s) 344, 702, 981, 1277, 1921, 1941, 2475
BspT107I GGYRCC 2 cut(s) 1644, 2157
BspTNI GGTCTC 1 cut(s) 2126
BsrI ACTGG 7 cut(s) 925, 1488, 1824, 1905, 1930, 1950, 2249
BssECI CCNNGG 5 cut(s) 353, 1458, 1516, 1558, 1648
BssMI GATC 9 cut(s) 349, 694, 973, 1042, 1282, 1895, 1926, 1946, 2480
BssNAI GTATAC 1 cut(s) 360
Bst1107I GTATAC 1 cut(s) 360
Bst2UI CCWGG 6 cut(s) 142, 1443, 1451, 1459, 1517, 1559
Bst6I CTCTTC 4 cut(s) 4, 1139, 1329, 2124
BstBAI YACGTR 1 cut(s) 456
BstC8I GCNNGC 1 cut(s) 337
BstDEI CTNAG 9 cut(s) 507, 698, 938, 1001, 1373, 1529, 1764, 2297, 2523
BstEII GGTNACC 4 cut(s) 1437, 1445, 1453, 1617
BstF5I GGATG 1 cut(s) 1665
BstFNI CGCG 4 cut(s) 222, 1120, 1694, 1712
BstHHI GCGC 1 cut(s) 1712
BstKTI GATC 9 cut(s) 352, 697, 976, 1045, 1285, 1898, 1929, 1949, 2483
BstMAI GTCTC 4 cut(s) 796, 1709, 2126, 2139
BstMBI GATC 9 cut(s) 349, 694, 973, 1042, 1282, 1895, 1926, 1946, 2480
BstMWI GCNNNNNNNGC 3 cut(s) 1126, 1682, 1691
BstNI CCWGG 6 cut(s) 142, 1443, 1451, 1459, 1517, 1559
BstNSI RCATGY 1 cut(s) 1235
BstPAI GACNNNNGTC 1 cut(s) 2118
BstPI GGTNACC 4 cut(s) 1437, 1445, 1453, 1617
BstSFI CTRYAG 1 cut(s) 2149
BstSLI GKGCMC 2 cut(s) 1649, 2160
BstSNI TACGTA 1 cut(s) 456
BstUI CGCG 4 cut(s) 222, 1120, 1694, 1712
BstV1I GCAGC 5 cut(s) 134, 662, 664, 1617, 2263
BstV2I GAAGAC 2 cut(s) 1695, 1734
BstX2I RGATCY 6 cut(s) 349, 694, 1895, 1926, 1946, 2480
BstXI CCANNNNNNTGG 2 cut(s) 806, 1838
BstYI RGATCY 6 cut(s) 349, 694, 1895, 1926, 1946, 2480
BstZ17I GTATAC 1 cut(s) 360
BsuI GTATCC 4 cut(s) 468, 551, 871, 2470
BsuRI GGCC 3 cut(s) 711, 1515, 1563
BtgZI GCGATG 2 cut(s) 160, 1818
BtrI CACGTC 2 cut(s) 1641, 2201
BtsCI GGATG 1 cut(s) 1665
BtsI GCAGTG 1 cut(s) 1475
BtsIMutI CAGTG 6 cut(s) 67, 882, 1475, 1481, 1568, 1986
BtuMI TCGCGA 1 cut(s) 1694
Cac8I GCNNGC 1 cut(s) 337
CciI TCATGA 1 cut(s) 1599
CfoI GCGC 1 cut(s) 1712
Cfr13I GGNCC 3 cut(s) 710, 1486, 1561
Cfr9I CCCGGG 1 cut(s) 1648
CseI GACGC 1 cut(s) 1355
CsiI ACCWGGT 2 cut(s) 1441, 1449
Csp6I GTAC 4 cut(s) 631, 842, 1116, 1122
CspCI CAANNNNNGTGG 2 cut(s) 1573, 1608
CviAII CATG 9 cut(s) 103, 245, 868, 977, 1223, 1232, 1358, 1600, 1916
CviQI GTAC 4 cut(s) 631, 842, 1116, 1122
DdeI CTNAG 9 cut(s) 507, 698, 938, 1001, 1373, 1529, 1764, 2297, 2523
DpnI GATC 9 cut(s) 351, 696, 975, 1044, 1284, 1897, 1928, 1948, 2482
DpnII GATC 9 cut(s) 349, 694, 973, 1042, 1282, 1895, 1926, 1946, 2480
DraI TTTAAA 1 cut(s) 1324
Eam1104I CTCTTC 4 cut(s) 4, 1139, 1329, 2124
EarI CTCTTC 4 cut(s) 4, 1139, 1329, 2124
Ecl136II GAGCTC 1 cut(s) 511
Eco105I TACGTA 1 cut(s) 456
Eco147I AGGCCT 1 cut(s) 1515
Eco24I GRGCYC 2 cut(s) 513, 1530
Eco31I GGTCTC 1 cut(s) 2126
Eco32I GATATC 1 cut(s) 1355
Eco47I GGWCC 1 cut(s) 1486
Eco53kI GAGCTC 1 cut(s) 511
Eco88I CYCGRG 4 cut(s) 615, 1545, 1648, 2214
Eco91I GGTNACC 4 cut(s) 1437, 1445, 1453, 1617
EcoICRI GAGCTC 1 cut(s) 511
EcoO65I GGTNACC 4 cut(s) 1437, 1445, 1453, 1617
EcoRII CCWGG 6 cut(s) 140, 1441, 1449, 1457, 1515, 1557
EcoRV GATATC 1 cut(s) 1355
EcoT22I ATGCAT 1 cut(s) 1921
EcoT38I GRGCYC 2 cut(s) 513, 1530
Esp3I CGTCTC 1 cut(s) 1709
FaeI CATG 9 cut(s) 106, 248, 871, 980, 1226, 1235, 1361, 1603, 1919
FaqI GGGAC 2 cut(s) 380, 974
FatI CATG 9 cut(s) 102, 244, 867, 976, 1222, 1231, 1357, 1599, 1915
FauI CCCGC 1 cut(s) 215
FblI GTMKAC 3 cut(s) 51, 359, 2143
Fnu4HI GCNGC 6 cut(s) 120, 123, 651, 678, 1631, 2277
FokI GGATG 1 cut(s) 1672
FriOI GRGCYC 2 cut(s) 513, 1530
Fsp4HI GCNGC 6 cut(s) 120, 123, 651, 678, 1631, 2277
FspBI CTAG 5 cut(s) 129, 195, 837, 1428, 1680
GlaI GCGC 1 cut(s) 1711
GluI GCNGC 6 cut(s) 120, 123, 651, 678, 1631, 2277
GsaI CCCAGC 1 cut(s) 1617
GsuI CTGGAG 2 cut(s) 497, 2114
HaeIII GGCC 3 cut(s) 711, 1515, 1563
HapII CCGG 5 cut(s) 1590, 1649, 1665, 2118, 2406
HgaI GACGC 1 cut(s) 1355
HhaI GCGC 1 cut(s) 1712
Hin1II CATG 9 cut(s) 106, 248, 871, 980, 1226, 1235, 1361, 1603, 1919
Hin6I GCGC 1 cut(s) 1710
HinP1I GCGC 1 cut(s) 1710
HindIII AAGCTT 1 cut(s) 785
HpaII CCGG 5 cut(s) 1590, 1649, 1665, 2118, 2406
Hpy166II GTNNAC 6 cut(s) 52, 360, 1413, 1670, 2037, 2144
Hpy8I GTNNAC 6 cut(s) 52, 360, 1413, 1670, 2037, 2144
Hpy99I CGWCG 7 cut(s) 243, 323, 1296, 1349, 1699, 1998, 2202
HpyAV CCTTC 5 cut(s) 239, 1246, 1398, 1699, 2506
HpyCH4IV ACGT 8 cut(s) 455, 737, 1294, 1640, 1697, 1834, 2200, 2424
HpyF10VI GCNNNNNNNGC 3 cut(s) 1126, 1682, 1691
HpyF3I CTNAG 9 cut(s) 507, 698, 938, 1001, 1373, 1529, 1764, 2297, 2523
HpySE526I ACGT 8 cut(s) 455, 737, 1294, 1640, 1697, 1834, 2200, 2424
Hsp92II CATG 9 cut(s) 106, 248, 871, 980, 1226, 1235, 1361, 1603, 1919
HspAI GCGC 1 cut(s) 1710
Kpn2I TCCGGA 1 cut(s) 2405
Kzo9I GATC 9 cut(s) 349, 694, 973, 1042, 1282, 1895, 1926, 1946, 2480
LmnI GCTCC 2 cut(s) 516, 1610
Lsp1109I GCAGC 5 cut(s) 134, 662, 664, 1617, 2263
LweI GCATC 9 cut(s) 181, 769, 1082, 1650, 1921, 1928, 2368, 2373, 2437
MabI ACCWGGT 2 cut(s) 1441, 1449
MaeI CTAG 5 cut(s) 129, 195, 837, 1428, 1680
MaeII ACGT 8 cut(s) 455, 737, 1294, 1640, 1697, 1834, 2200, 2424
MalI GATC 9 cut(s) 351, 696, 975, 1044, 1284, 1897, 1928, 1948, 2482
MboI GATC 9 cut(s) 349, 694, 973, 1042, 1282, 1895, 1926, 1946, 2480
MfeI CAATTG 2 cut(s) 967, 2316
MflI RGATCY 6 cut(s) 349, 694, 1895, 1926, 1946, 2480
MhlI GDGCHC 5 cut(s) 513, 1530, 1649, 1979, 2160
MluI ACGCGT 1 cut(s) 1118
MlyI GAGTC 5 cut(s) 607, 1222, 2108, 2141, 2206
MmeI TCCRAC 7 cut(s) 555, 1315, 1758, 1922, 1976, 2079, 2221
Mph1103I ATGCAT 1 cut(s) 1921
MroI TCCGGA 1 cut(s) 2405
MslI CAYNNNNRTG 2 cut(s) 1221, 2151
MspI CCGG 5 cut(s) 1590, 1649, 1665, 2118, 2406
MunI CAATTG 2 cut(s) 967, 2316
Mva1269I GAATGC 2 cut(s) 679, 2278
MvaI CCWGG 6 cut(s) 142, 1443, 1451, 1459, 1517, 1559
MvnI CGCG 4 cut(s) 222, 1120, 1694, 1712
MwoI GCNNNNNNNGC 3 cut(s) 1126, 1682, 1691
NciI CCSGG 4 cut(s) 1590, 1649, 1650, 1665
NdeII GATC 9 cut(s) 349, 694, 973, 1042, 1282, 1895, 1926, 1946, 2480
NlaIII CATG 9 cut(s) 106, 248, 871, 980, 1226, 1235, 1361, 1603, 1919
NlaIV GGNNCC 7 cut(s) 227, 712, 1646, 1822, 1903, 2159, 2311
NruI TCGCGA 1 cut(s) 1694
NsiI ATGCAT 1 cut(s) 1921
NspI RCATGY 1 cut(s) 1235
OliI CACNNNNGTG 1 cut(s) 2151
PaeR7I CTCGAG 2 cut(s) 615, 2214
PagI TCATGA 1 cut(s) 1599
PceI AGGCCT 1 cut(s) 1515
PcsI WCGNNNNNNNCGW 1 cut(s) 1703
PctI GAATGC 2 cut(s) 679, 2278
PfeI GAWTC 8 cut(s) 57, 327, 437, 934, 1025, 1596, 1785, 1888
Pfl23II CGTACG 1 cut(s) 1121
PflFI GACNNNGTC 1 cut(s) 1699
PflMI CCANNNNNTGG 2 cut(s) 147, 1504
PkrI GCNGC 6 cut(s) 121, 124, 652, 679, 1632, 2278
PleI GAGTC 5 cut(s) 607, 1221, 2108, 2140, 2206
PpsI GAGTC 5 cut(s) 607, 1221, 2108, 2140, 2206
Ppu21I YACGTR 1 cut(s) 456
PshAI GACNNNNGTC 1 cut(s) 2118
Psp124BI GAGCTC 1 cut(s) 513
Psp1406I AACGTT 1 cut(s) 737
Psp6I CCWGG 6 cut(s) 140, 1441, 1449, 1457, 1515, 1557
PspEI GGTNACC 4 cut(s) 1437, 1445, 1453, 1617
PspFI CCCAGC 1 cut(s) 1613
PspGI CCWGG 6 cut(s) 140, 1441, 1449, 1457, 1515, 1557
PspLI CGTACG 1 cut(s) 1121
PspN4I GGNNCC 7 cut(s) 227, 712, 1646, 1822, 1903, 2159, 2311
PspPI GGNCC 3 cut(s) 710, 1486, 1561
PsuI RGATCY 6 cut(s) 349, 694, 1895, 1926, 1946, 2480
PsyI GACNNNGTC 1 cut(s) 1699
RruI TCGCGA 1 cut(s) 1694
RsaI GTAC 4 cut(s) 632, 843, 1117, 1123
RsaNI GTAC 4 cut(s) 631, 842, 1116, 1122
RseI CAYNNNNRTG 2 cut(s) 1221, 2151
SacI GAGCTC 1 cut(s) 513
SatI GCNGC 6 cut(s) 120, 123, 651, 678, 1631, 2277
Sau3AI GATC 9 cut(s) 349, 694, 973, 1042, 1282, 1895, 1926, 1946, 2480
Sau96I GGNCC 3 cut(s) 710, 1486, 1561
ScaI AGTACT 1 cut(s) 632
SchI GAGTC 5 cut(s) 607, 1222, 2108, 2141, 2206
SduI GDGCHC 5 cut(s) 513, 1530, 1649, 1979, 2160
SexAI ACCWGGT 2 cut(s) 1441, 1449
SfaNI GCATC 9 cut(s) 181, 769, 1082, 1650, 1921, 1928, 2368, 2373, 2437
SfcI CTRYAG 1 cut(s) 2149
Sfr274I CTCGAG 2 cut(s) 615, 2214
SinI GGWCC 1 cut(s) 1486
SlaI CTCGAG 2 cut(s) 615, 2214
SmaI CCCGGG 1 cut(s) 1650
SmiMI CAYNNNNRTG 2 cut(s) 1221, 2151
SmlI CTYRAG 5 cut(s) 615, 626, 1181, 2214, 2225
SmoI CTYRAG 5 cut(s) 615, 626, 1181, 2214, 2225
SnaBI TACGTA 1 cut(s) 456
SpeI ACTAGT 1 cut(s) 128
SrfI GCCCGGGC 1 cut(s) 1650
SseBI AGGCCT 1 cut(s) 1515
SsiI CCGC 3 cut(s) 119, 222, 1712
SspI AATATT 1 cut(s) 414
SspMI CTAG 5 cut(s) 129, 195, 837, 1428, 1680
SstI GAGCTC 1 cut(s) 513
StuI AGGCCT 1 cut(s) 1515
TaiI ACGT 8 cut(s) 458, 740, 1297, 1643, 1700, 1837, 2203, 2427
TaqII GACCGA 1 cut(s) 69
TatI WGTACW 1 cut(s) 630
TauI GCSGC 1 cut(s) 122
TfiI GAWTC 8 cut(s) 57, 327, 437, 934, 1025, 1596, 1785, 1888
TscAI CASTG 6 cut(s) 67, 882, 1482, 1488, 1575, 1986
TseI GCWGC 5 cut(s) 122, 650, 677, 1630, 2276
TspDTI ATGAA 6 cut(s) 90, 410, 900, 1054, 1616, 2087
TspGWI ACGGA 1 cut(s) 1976
TspMI CCCGGG 1 cut(s) 1648
TspRI CASTG 6 cut(s) 67, 882, 1482, 1488, 1575, 1986
Tth111I GACNNNGTC 1 cut(s) 1699
Van91I CCANNNNNTGG 2 cut(s) 147, 1504
VpaK11BI GGWCC 1 cut(s) 1486
XapI RAATTY 5 cut(s) 1019, 1163, 1400, 2088, 2383
XceI RCATGY 1 cut(s) 1235
XcmI CCANNNNNNNNNTGG 1 cut(s) 1838
XhoI CTCGAG 2 cut(s) 615, 2214
XmaI CCCGGG 1 cut(s) 1648
XmiI GTMKAC 3 cut(s) 51, 359, 2143
XspI CTAG 5 cut(s) 129, 195, 837, 1428, 1680
ZrmI AGTACT 1 cut(s) 632
Zsp2I ATGCAT 1 cut(s) 1921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.