FvH4_1g15870

BEST Arabidopsis thaliana protein match is

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000095
Physical Location & Seq
Forward (+)
9030059 .. 9033664
3606 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g15870.t1

Sequence Viewer

Length: 1551 bp
ATGGCATCCAATGAGCTCGAGGCGCAGCTTCTCGAAATAGGGAATCAACTCCTGGAACCGCCGTCCACCGTCGAGGAACTCCTTCCTCTTCTCGACAGGATCGAAAGATGTCTAACCAAGGTAGGCCAATCACCAAACAAGTCAATGCAAGCCGCGCTTTCACCGTCGCAGAAGGCATTGGTTGCTGAACAGCTCTTAAGGCATTCAGATCCTCATGTCAAAGTTTCAGTTGCGTCTTGCATCACTGAGATAACCAGAATAACTGCACCGGATGCACCATACGATGATGACCCAATGAAAGAGGCCTTTCAGCTTATCGTGTCTACATTTGAAAATCTACAAAACAAGCCCAGCCGATCATACACAAAGACGACATACATTCTTGAAACTGTTGCAAGGGTCAGGTCCTGTGACTTAATGTTGGATCTTGAATGCGATGAATTGATTGTTGAGATGTTCCAGCATTTTCTCAAGGCAATAAGGGGCTACCACCCAGTGAGTGTTATTTCATCGATGGAGAATATTATTACACTTGTTATAGAAGAATGTGAAGATGTATCTTGTCAACTTCTTGCTCCCTTATTAGCTAGTGTGAAAAATGTTGAAGAGGAAGTAGAAACCCATGGCATTGCATTGGCTGATTACAGTAAGGTAGTAGCTTCTATATGCTCAGAGTCAGCTGGTGACACTGAGAAGAATGGAGTGCATGATGATAAGGATATGGGTGGTTATAACTTGAGAGGAAGAAAGAAGAAAGATGTTGATCTTAACATGTTTGACAGAATCAGTGGATTGCCGGATGAAATTCTTACGAGCATACTCTCTCTATTGCCCTTAAGGGAAGCTCAAGCTACTCGTATCCTTTCTAGGAGGTGGCAGCATGTGTGGCCCTATTGTACGACTCTCAATTTCAATGCTGGAAGACAATTAATTACATTTGGCAAGCTCCAATTTGATTGGGAACGCGAGCTTGTATTGCGTATGTATGTTGATTGGGTGGATTCTGTTTTGAAACAACATAAAGCCCCTAACATTGAGCGCTTCCGAGTTGCTTTTGGTCATGGTCCTAGAAGTTGTATTGATGATTGGATTCAATTTGCAATGAGGAAAGGAGTTCAAATTCTTGAGATGGACTTATCAGCTATTTTACATCCAAGGGGTCTGCACTACAAACTTAGCAACAAAGTGTTGGGTATAAGAGAATTTTCTTCTTTCAAGGCCTTGTGTTCTGAATACATTGGTTTCAAGTTTCTCAAAGTTCTTGATTTCAATTGTGTTGATGTGGACCAAGGTATTCTTGAGTACTTCATCTATAACTGTCCAGTTCTTGAACGAGTAGCCGTGTGTGATTCATCCTTGCTGGTCAATCTTAGAGTTGTTGGTCAGTCTATTGCATTGAAGTACTTAACGATACATCGATGTCGCAATCTCAAAAGCGTGGAGATATGTGAAGCAAACTTAGTTTCATTTACTTATGGTGGGGAGCTGGAAAAGTTGCTTCTAAGAAATCTACCGCTTCTTGTTGAGGTATCCCTTTCAGAATGGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

517

Amino Acids

58.53

Weight (kDa)

5.52

Isoelectric Point (pI)

46.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDS5 PF20168 26 - 213 5.7e-46 Sister chromatid cohesion protein PDS5 protein
F-box PF00646 262 - 296 4.5e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 336 - 503 7.4e-11 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 361 - 480 4e-06 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 732
AccI GTMKAC 1 cut(s) 323
AccII CGCG 2 cut(s) 155, 966
AciI CCGC 3 cut(s) 59, 153, 1514
AclWI GGATC 3 cut(s) 107, 203, 432
AcsI RAATTY 3 cut(s) 804, 1119, 1202
AdeI CACNNNGTG 1 cut(s) 496
AfaI GTAC 3 cut(s) 898, 1304, 1403
AfeI AGCGCT 1 cut(s) 1040
AflII CTTAAG 2 cut(s) 196, 835
AflIII ACRYGT 1 cut(s) 771
AjnI CCWGG 1 cut(s) 51
Alw21I GWGCWC 1 cut(s) 18
AlwI GGATC 3 cut(s) 107, 203, 432
AlwNI CAGNNNCTG 1 cut(s) 408
Ama87I CYCGRG 1 cut(s) 17
Aor51HI AGCGCT 1 cut(s) 1040
AoxI GGCC 4 cut(s) 124, 303, 887, 1218
ApeKI GCWGC 2 cut(s) 25, 877
ApoI RAATTY 3 cut(s) 804, 1119, 1202
AseI ATTAAT 1 cut(s) 929
Asp700I GAANNNNTTC 1 cut(s) 81
AspLEI GCGC 3 cut(s) 25, 157, 1041
AspS9I GGNCC 4 cut(s) 405, 888, 1064, 1285
AsuHPI GGTGA 3 cut(s) 123, 153, 695
AvaI CYCGRG 1 cut(s) 17
AvaII GGWCC 3 cut(s) 405, 1064, 1285
BanII GRGCYC 1 cut(s) 18
BbsI GAAGAC 1 cut(s) 928
Bbv12I GWGCWC 1 cut(s) 18
BbvI GCAGC 2 cut(s) 37, 889
BccI CCATC 2 cut(s) 508, 1123
BceAI ACGGC 2 cut(s) 46, 1325
BciT130I CCWGG 1 cut(s) 53
BciVI GTATCC 2 cut(s) 869, 1540
BfaI CTAG 3 cut(s) 588, 867, 1068
BfoI RGCGCY 1 cut(s) 1042
BfrI CTTAAG 2 cut(s) 196, 835
BfuI GTATCC 2 cut(s) 869, 1540
BisI GCNGC 3 cut(s) 26, 153, 878
BlsI GCNGC 3 cut(s) 27, 154, 879
BmcAI AGTACT 2 cut(s) 1304, 1403
Bme1390I CCNGG 1 cut(s) 53
Bme18I GGWCC 3 cut(s) 405, 1064, 1285
BmeT110I CYCGRG 1 cut(s) 17
BmgT120I GGNCC 4 cut(s) 405, 888, 1064, 1285
BmiI GGNNCC 1 cut(s) 57
BmrFI CCNGG 1 cut(s) 53
BmrI ACTGGG 1 cut(s) 488
BmsI GCATC 3 cut(s) 14, 249, 262
BmuI ACTGGG 1 cut(s) 488
BpiI GAAGAC 1 cut(s) 928
BpuEI CTTGAG 5 cut(s) 455, 757, 831, 1145, 1319
Bsa29I ATCGAT 2 cut(s) 512, 1417
BsaBI GATNNNNATC 1 cut(s) 762
BsaJI CCNNGG 4 cut(s) 117, 622, 1154, 1288
BsaWI WCCGGW 1 cut(s) 268
Bse1I ACTGG 2 cut(s) 494, 1322
Bse3DI GCAATG 2 cut(s) 627, 1107
Bse8I GATNNNNATC 1 cut(s) 762
BseBI CCWGG 1 cut(s) 53
BseCI ATCGAT 2 cut(s) 512, 1417
BseDI CCNNGG 4 cut(s) 117, 622, 1154, 1288
BseGI GGATG 5 cut(s) 5, 277, 805, 1150, 1352
BseJI GATNNNNATC 1 cut(s) 762
BseMI GCAATG 2 cut(s) 627, 1107
BseMII CTCAG 3 cut(s) 237, 681, 684
BseNI ACTGG 2 cut(s) 494, 1322
BseXI GCAGC 2 cut(s) 37, 889
BseYI CCCAGC 1 cut(s) 350
BsgI GTGCAG 2 cut(s) 249, 1148
Bsh1236I CGCG 2 cut(s) 155, 966
BshFI GGCC 4 cut(s) 126, 305, 889, 1220
BshVI ATCGAT 2 cut(s) 512, 1417
BsiHKAI GWGCWC 1 cut(s) 18
BsiHKCI CYCGRG 1 cut(s) 17
BsiSI CCGG 2 cut(s) 269, 797
BsmI GAATGC 2 cut(s) 202, 437
BsnI GGCC 4 cut(s) 126, 305, 889, 1220
BsoBI CYCGRG 1 cut(s) 17
Bsp1286I GDGCHC 1 cut(s) 18
Bsp143I GATC 5 cut(s) 99, 208, 356, 424, 763
Bsp19I CCATGG 1 cut(s) 622
BspACI CCGC 3 cut(s) 59, 153, 1514
BspANI GGCC 4 cut(s) 126, 305, 889, 1220
BspCNI CTCAG 3 cut(s) 238, 682, 683
BspDI ATCGAT 2 cut(s) 512, 1417
BspFNI CGCG 2 cut(s) 155, 966
BspLI GGNNCC 1 cut(s) 57
BspPI GGATC 3 cut(s) 107, 203, 432
BspTI CTTAAG 2 cut(s) 196, 835
BsrDI GCAATG 2 cut(s) 627, 1107
BsrI ACTGG 2 cut(s) 494, 1322
BssECI CCNNGG 4 cut(s) 117, 622, 1154, 1288
BssMI GATC 5 cut(s) 99, 208, 356, 424, 763
BssT1I CCWWGG 4 cut(s) 117, 622, 1154, 1288
Bst2UI CCWGG 1 cut(s) 53
Bst4CI ACNGT 5 cut(s) 70, 165, 391, 647, 1319
Bst6I CTCTTC 2 cut(s) 93, 600
BstAFI CTTAAG 2 cut(s) 196, 835
BstAPI GCANNNNNTGC 2 cut(s) 182, 272
BstC8I GCNNGC 3 cut(s) 150, 944, 968
BstDEI CTNAG 7 cut(s) 246, 670, 690, 1175, 1370, 1459, 1502
BstDSI CCRYGG 1 cut(s) 622
BstF5I GGATG 5 cut(s) 5, 277, 805, 1150, 1352
BstFNI CGCG 2 cut(s) 155, 966
BstH2I RGCGCY 1 cut(s) 1042
BstHHI GCGC 3 cut(s) 25, 157, 1041
BstKTI GATC 5 cut(s) 102, 211, 359, 427, 766
BstMBI GATC 5 cut(s) 99, 208, 356, 424, 763
BstMWI GCNNNNNNNGC 7 cut(s) 22, 154, 182, 199, 272, 886, 976
BstNI CCWGG 1 cut(s) 53
BstNSI RCATGY 2 cut(s) 775, 884
BstSCI CCNGG 1 cut(s) 51
BstUI CGCG 2 cut(s) 155, 966
BstV1I GCAGC 2 cut(s) 37, 889
BstV2I GAAGAC 1 cut(s) 928
BstX2I RGATCY 2 cut(s) 208, 424
BstYI RGATCY 2 cut(s) 208, 424
Bsu15I ATCGAT 2 cut(s) 512, 1417
BsuI GTATCC 2 cut(s) 869, 1540
BsuRI GGCC 4 cut(s) 126, 305, 889, 1220
BsuTUI ATCGAT 2 cut(s) 512, 1417
BtgI CCRYGG 1 cut(s) 622
BtgZI GCGATG 1 cut(s) 450
BtsCI GGATG 5 cut(s) 5, 277, 805, 1150, 1352
BtsIMutI CAGTG 4 cut(s) 243, 501, 687, 793
Cac8I GCNNGC 3 cut(s) 150, 944, 968
CaiI CAGNNNCTG 1 cut(s) 408
CfoI GCGC 3 cut(s) 25, 157, 1041
Cfr13I GGNCC 4 cut(s) 405, 888, 1064, 1285
ClaI ATCGAT 2 cut(s) 512, 1417
CseI GACGC 1 cut(s) 222
Csp6I GTAC 3 cut(s) 897, 1303, 1402
CviAII CATG 6 cut(s) 215, 623, 707, 772, 881, 1061
CviQI GTAC 3 cut(s) 897, 1303, 1402
DdeI CTNAG 7 cut(s) 246, 670, 690, 1175, 1370, 1459, 1502
DpnI GATC 5 cut(s) 101, 210, 358, 426, 765
DpnII GATC 5 cut(s) 99, 208, 356, 424, 763
DraIII CACNNNGTG 1 cut(s) 496
Eam1104I CTCTTC 2 cut(s) 93, 600
EarI CTCTTC 2 cut(s) 93, 600
Ecl136II GAGCTC 1 cut(s) 16
Eco130I CCWWGG 4 cut(s) 117, 622, 1154, 1288
Eco147I AGGCCT 2 cut(s) 305, 1220
Eco24I GRGCYC 1 cut(s) 18
Eco47I GGWCC 3 cut(s) 405, 1064, 1285
Eco47III AGCGCT 1 cut(s) 1040
Eco53kI GAGCTC 1 cut(s) 16
Eco88I CYCGRG 1 cut(s) 17
EcoICRI GAGCTC 1 cut(s) 16
EcoO109I RGGNCCY 1 cut(s) 405
EcoRII CCWGG 1 cut(s) 51
EcoT14I CCWWGG 4 cut(s) 117, 622, 1154, 1288
EcoT38I GRGCYC 1 cut(s) 18
ErhI CCWWGG 4 cut(s) 117, 622, 1154, 1288
FaeI CATG 6 cut(s) 218, 626, 710, 775, 884, 1064
FalI AAGNNNNNCTT 4 cut(s) 141, 173, 1281, 1313
FatI CATG 6 cut(s) 214, 622, 706, 771, 880, 1060
FblI GTMKAC 1 cut(s) 323
Fnu4HI GCNGC 3 cut(s) 26, 153, 878
FokI GGATG 4 cut(s) 284, 812, 1137, 1339
FriOI GRGCYC 1 cut(s) 18
Fsp4HI GCNGC 3 cut(s) 26, 153, 878
FspBI CTAG 3 cut(s) 588, 867, 1068
GlaI GCGC 3 cut(s) 24, 156, 1040
GluI GCNGC 3 cut(s) 26, 153, 878
GsaI CCCAGC 1 cut(s) 354
HaeII RGCGCY 1 cut(s) 1042
HaeIII GGCC 4 cut(s) 126, 305, 889, 1220
HapII CCGG 2 cut(s) 269, 797
HgaI GACGC 1 cut(s) 222
HhaI GCGC 3 cut(s) 25, 157, 1041
Hin1II CATG 6 cut(s) 218, 626, 710, 775, 884, 1064
Hin6I GCGC 3 cut(s) 23, 155, 1039
HinP1I GCGC 3 cut(s) 23, 155, 1039
HincII GTYRAC 1 cut(s) 566
HindII GTYRAC 1 cut(s) 566
HinfI GANTC 7 cut(s) 43, 674, 783, 901, 1001, 1090, 1349
HpaII CCGG 2 cut(s) 269, 797
HphI GGTGA 3 cut(s) 123, 153, 695
Hpy166II GTNNAC 4 cut(s) 66, 324, 566, 1285
Hpy188I TCNGA 5 cut(s) 208, 673, 1046, 1231, 1540
Hpy188III TCNNGA 8 cut(s) 32, 92, 383, 428, 1124, 1262, 1298, 1328
Hpy8I GTNNAC 4 cut(s) 66, 324, 566, 1285
Hpy99I CGWCG 2 cut(s) 74, 169
HpyAV CCTTC 2 cut(s) 92, 166
HpyCH4III ACNGT 5 cut(s) 70, 165, 391, 647, 1319
HpyF10VI GCNNNNNNNGC 7 cut(s) 22, 154, 182, 199, 272, 886, 976
HpyF3I CTNAG 7 cut(s) 246, 670, 690, 1175, 1370, 1459, 1502
Hsp92II CATG 6 cut(s) 218, 626, 710, 775, 884, 1064
HspAI GCGC 3 cut(s) 23, 155, 1039
Kzo9I GATC 5 cut(s) 99, 208, 356, 424, 763
LmnI GCTCC 3 cut(s) 580, 951, 1483
Lsp1109I GCAGC 2 cut(s) 37, 889
LweI GCATC 3 cut(s) 14, 249, 262
MaeI CTAG 3 cut(s) 588, 867, 1068
MaeIII GTNAC 2 cut(s) 410, 683
MalI GATC 5 cut(s) 101, 210, 358, 426, 765
MboI GATC 5 cut(s) 99, 208, 356, 424, 763
MboII GAAGA 9 cut(s) 80, 554, 563, 617, 706, 756, 763, 933, 1200
MfeI CAATTG 1 cut(s) 1270
MflI RGATCY 2 cut(s) 208, 424
MhlI GDGCHC 1 cut(s) 18
MlyI GAGTC 2 cut(s) 683, 895
MmeI TCCRAC 1 cut(s) 402
MroXI GAANNNNTTC 1 cut(s) 81
MseI TTAA 6 cut(s) 197, 416, 768, 836, 929, 1406
MspA1I CMGCKG 1 cut(s) 680
MspCI CTTAAG 2 cut(s) 196, 835
MspI CCGG 2 cut(s) 269, 797
MspR9I CCNGG 1 cut(s) 53
MunI CAATTG 1 cut(s) 1270
Mva1269I GAATGC 2 cut(s) 202, 437
MvaI CCWGG 1 cut(s) 53
MvnI CGCG 2 cut(s) 155, 966
MwoI GCNNNNNNNGC 7 cut(s) 22, 154, 182, 199, 272, 886, 976
NcoI CCATGG 1 cut(s) 622
NdeII GATC 5 cut(s) 99, 208, 356, 424, 763
NlaIII CATG 6 cut(s) 218, 626, 710, 775, 884, 1064
NlaIV GGNNCC 1 cut(s) 57
NmuCI GTSAC 2 cut(s) 410, 683
NspI RCATGY 2 cut(s) 775, 884
PaeR7I CTCGAG 1 cut(s) 17
PceI AGGCCT 2 cut(s) 305, 1220
PciI ACATGT 1 cut(s) 771
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PctI GAATGC 2 cut(s) 202, 437
PdmI GAANNNNTTC 1 cut(s) 81
PfeI GAWTC 5 cut(s) 43, 783, 1001, 1090, 1349
PfoI TCCNGGA 1 cut(s) 51
PkrI GCNGC 3 cut(s) 27, 154, 879
PleI GAGTC 2 cut(s) 682, 895
PpsI GAGTC 2 cut(s) 682, 895
PpuMI RGGWCCY 1 cut(s) 405
PscI ACATGT 1 cut(s) 771
PshBI ATTAAT 1 cut(s) 929
PsiI TTATAA 1 cut(s) 732
Psp124BI GAGCTC 1 cut(s) 18
Psp5II RGGWCCY 1 cut(s) 405
Psp6I CCWGG 1 cut(s) 51
PspFI CCCAGC 1 cut(s) 350
PspGI CCWGG 1 cut(s) 51
PspN4I GGNNCC 1 cut(s) 57
PspPI GGNCC 4 cut(s) 405, 888, 1064, 1285
PspPPI RGGWCCY 1 cut(s) 405
PspXI VCTCGAGB 1 cut(s) 17
PstNI CAGNNNCTG 1 cut(s) 408
PsuI RGATCY 2 cut(s) 208, 424
PvuII CAGCTG 1 cut(s) 680
RsaI GTAC 3 cut(s) 898, 1304, 1403
RsaNI GTAC 3 cut(s) 897, 1303, 1402
SacI GAGCTC 1 cut(s) 18
SaqAI TTAA 6 cut(s) 197, 416, 768, 836, 929, 1406
SatI GCNGC 3 cut(s) 26, 153, 878
Sau3AI GATC 5 cut(s) 99, 208, 356, 424, 763
Sau96I GGNCC 4 cut(s) 405, 888, 1064, 1285
ScaI AGTACT 2 cut(s) 1304, 1403
SchI GAGTC 2 cut(s) 683, 895
ScrFI CCNGG 1 cut(s) 53
SduI GDGCHC 1 cut(s) 18
SfaNI GCATC 3 cut(s) 14, 249, 262
Sfr274I CTCGAG 1 cut(s) 17
SinI GGWCC 3 cut(s) 405, 1064, 1285
SlaI CTCGAG 1 cut(s) 17
SmlI CTYRAG 8 cut(s) 17, 196, 470, 736, 835, 846, 1124, 1298
SmoI CTYRAG 8 cut(s) 17, 196, 470, 736, 835, 846, 1124, 1298
SseBI AGGCCT 2 cut(s) 305, 1220
SsiI CCGC 3 cut(s) 59, 153, 1514
SspI AATATT 1 cut(s) 523
SspMI CTAG 3 cut(s) 588, 867, 1068
SstI GAGCTC 1 cut(s) 18
StuI AGGCCT 2 cut(s) 305, 1220
StyD4I CCNGG 1 cut(s) 51
StyI CCWWGG 4 cut(s) 117, 622, 1154, 1288
TaaI ACNGT 5 cut(s) 70, 165, 391, 647, 1319
TaqI TCGA 7 cut(s) 18, 33, 72, 93, 102, 512, 1417
TatI WGTACW 2 cut(s) 1302, 1401
TauI GCSGC 1 cut(s) 155
TfiI GAWTC 5 cut(s) 43, 783, 1001, 1090, 1349
Tru1I TTAA 6 cut(s) 197, 416, 768, 836, 929, 1406
Tru9I TTAA 6 cut(s) 197, 416, 768, 836, 929, 1406
TscAI CASTG 4 cut(s) 250, 501, 694, 793
TseFI GTSAC 2 cut(s) 410, 683
TseI GCWGC 2 cut(s) 25, 877
Tsp45I GTSAC 2 cut(s) 410, 683
TspDTI ATGAA 7 cut(s) 311, 453, 498, 816, 1297, 1341, 1455
TspRI CASTG 4 cut(s) 250, 501, 694, 793
Vha464I CTTAAG 2 cut(s) 196, 835
VpaK11BI GGWCC 3 cut(s) 405, 1064, 1285
VspI ATTAAT 1 cut(s) 929
XapI RAATTY 3 cut(s) 804, 1119, 1202
XceI RCATGY 2 cut(s) 775, 884
XhoI CTCGAG 1 cut(s) 17
XmiI GTMKAC 1 cut(s) 323
XmnI GAANNNNTTC 1 cut(s) 81
XspI CTAG 3 cut(s) 588, 867, 1068
ZrmI AGTACT 2 cut(s) 1304, 1403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.