pycom02g02060

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0000095
Physical Location & Seq
Reverse (-)
1242225 .. 1244119
1895 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g02060.2

Sequence Viewer

Length: 1455 bp
ATGACAGCCCACGAAGCCTCCTCTTCATCCTCCTCCAAGTCAAAACTTTGGAACTACGACGTCTTCTTGAGCTTCAGAGGCGAAGACACGCACAAGGGCTTCACAGACCACCTCCACGCGGCATTAAAAGACAGGGGATACCAGACTTTTATGGGTGACAACAATCTCAAAAGAGGGAAAGAAATGAAAGAGGAACGGTTACTGGCCTCAAAGAGCTATGTGCATTCGAGTTGGTGTCTTGACGAGCTGGTGAAGATCATGGGGTGCAGATCCAAACTGGGGCGACATGTTTTGCCAATATTCTATCACATTGATCCTTCGCATGTCAGGAAGCTGGAAGAAGAGTTAGCCAAAGCATTTCAGAAACGCGAATTGGACATCGGTGAAGAAAAAGATGACCGGAAACGTGAATATGAAAGAGAAAGGGTTAAGCAGTGGAGAGAGGCTCTTAAAGAAGCTGCAAGTTTGTCCGGCTACCAAGCTCAAATCAATGACAATGGGCACGAATCAGAGCTTATTAGAGAAATTGTTGACTATGTTAATACGGAATGGCTTCTGAGCACAAACGAACTAAATGTGGCCAAGCACCCGTTCTCTCCTCTTTTCTGTATATGCAAGGATGATGGGCAAAGCTGGGCCGTGCTGCAGGACCGAATCAGTAATTTACCACCCGAAATCCTTGTCTGTATAGTGTCACTCTTGCCGCTAAAGGAAGCAGCAGCTACTAGTATTCTTTCTAGGCGATGGCGCCATGTCTGGGCGTCTACCACGACTCTCAGTTTTGACGCTGTTAACTTTGATGTTGGCGATGGTACTATCGCCACTACGATACAACGCTTCTTGAAGCTCGAAGAACAAGTGAGAGACCAGCAAAGCCGCCTCTACGTCAATTGGGTCGATCACATTCTGGGCCAACATAGAGGCCAATGCATTGAACGCTTCCGGGTTTGCTTTTTTCTGCAACGTGACCTTGCAGGTTCCATTGACAAATGGATCCAATTTGCAATGGAAAAGAGGGTTCAAATACTTGAGTTGGAGCTTTGGACAGACTCAATTGCTAACCTTGATGATGACTACACATTTCCCCACAAACTACTATTGGGTCCGGAAAAGCAAAAGGTCCTGTTTTCTAACCTTCCAAGCCTACGCCCTTGTGGATACAGTATTGCTCCTTTCAAGTCCCTCAGAGTTGTTCGCTTTAAACATGTTGGTAACGGCGATGCTGTTGACTTCTTGTTGTCCAACTGTCGAGTTCTAGAACGTTTGTCGCTGAGTTTTGCCAAAGATTTAGGCAAGCTAAGAGTGATAGGTCCCTCCATCGCATTGAAATATTTAGAGATAAAGTATTGCCTTGATGTCAGCTTCATTGAGATCTCTGGTGTAAACATTGTCTCCTTTATTTATTGTGGACCGATAATAGATTTGAGTTTCAATAATGTGCCGCTGAATTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

485

Amino Acids

55.66

Weight (kDa)

6.95

Isoelectric Point (pI)

39.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 63
Acc36I ACCTGC 1 cut(s) 965
AccB1I GGYRCC 1 cut(s) 747
AccI GTMKAC 1 cut(s) 764
AccII CGCG 2 cut(s) 119, 369
AccIII TCCGGA 1 cut(s) 1105
AciI CCGC 4 cut(s) 119, 704, 877, 1442
AclI AACGTT 1 cut(s) 1261
AclWI GGATC 4 cut(s) 264, 308, 988, 1001
AcoI YGGCCR 1 cut(s) 579
AcsI RAATTY 1 cut(s) 1447
AcuI CTGAAG 1 cut(s) 58
AcyI GRCGYC 3 cut(s) 60, 748, 761
AfaI GTAC 1 cut(s) 814
AfiI CCNNNNNNNGG 3 cut(s) 118, 279, 757
AflIII ACRYGT 2 cut(s) 286, 1204
AgsI TTSAA 6 cut(s) 844, 935, 1022, 1177, 1327, 1432
AhlI ACTAGT 1 cut(s) 725
AjuI GAANNNNNNNTTGG 4 cut(s) 356, 388, 575, 607
Alw21I GWGCWC 1 cut(s) 563
Alw26I GTCTC 2 cut(s) 858, 1396
AlwI GGATC 4 cut(s) 264, 308, 988, 1001
Aor13HI TCCGGA 1 cut(s) 1105
AoxI GGCC 5 cut(s) 204, 579, 636, 910, 922
ApeKI GCWGC 4 cut(s) 458, 643, 716, 719
ApoI RAATTY 1 cut(s) 1447
ArsI GACNNNNNNTTYG 2 cut(s) 666, 698
Asp700I GAANNNNTTC 1 cut(s) 552
AspLEI GCGC 1 cut(s) 750
AspS9I GGNCC 7 cut(s) 636, 649, 910, 1103, 1120, 1310, 1409
AsuC2I CCSGG 1 cut(s) 944
AsuHPI GGTGA 3 cut(s) 167, 262, 395
AvaII GGWCC 5 cut(s) 649, 1103, 1120, 1310, 1409
BaeGI GKGCMC 1 cut(s) 504
BalI TGGCCA 1 cut(s) 581
BamHI GGATCC 1 cut(s) 993
BanI GGYRCC 1 cut(s) 747
BbsI GAAGAC 2 cut(s) 55, 90
Bbv12I GWGCWC 1 cut(s) 563
BbvI GCAGC 4 cut(s) 445, 630, 728, 731
BccI CCATC 4 cut(s) 617, 738, 803, 1325
BceAI ACGGC 2 cut(s) 623, 1231
BciVI GTATCC 2 cut(s) 131, 1151
BcnI CCSGG 1 cut(s) 944
BcoDI GTCTC 2 cut(s) 858, 1396
BcuI ACTAGT 1 cut(s) 725
BfaI CTAG 3 cut(s) 726, 738, 1256
BfmI CTRYAG 1 cut(s) 644
BfoI RGCGCY 1 cut(s) 751
BfuAI ACCTGC 1 cut(s) 965
BfuI GTATCC 2 cut(s) 131, 1151
BglII AGATCT 1 cut(s) 1371
BisI GCNGC 8 cut(s) 120, 459, 644, 704, 717, 720, 877, 1442
BlsI GCNGC 8 cut(s) 121, 460, 645, 705, 718, 721, 878, 1443
Bme1390I CCNGG 1 cut(s) 944
Bme18I GGWCC 5 cut(s) 649, 1103, 1120, 1310, 1409
BmgT120I GGNCC 7 cut(s) 636, 649, 910, 1103, 1120, 1310, 1409
BmiI GGNNCC 5 cut(s) 749, 979, 995, 1104, 1312
BmrFI CCNGG 1 cut(s) 944
BmrI ACTGGG 1 cut(s) 287
BmsI GCATC 1 cut(s) 1210
BmuI ACTGGG 1 cut(s) 287
BpiI GAAGAC 2 cut(s) 55, 90
BplI GAGNNNNNCTC 2 cut(s) 430, 462
BpuEI CTTGAG 2 cut(s) 88, 1049
BpuMI CCSGG 1 cut(s) 944
BsaHI GRCGYC 3 cut(s) 60, 748, 761
BsaI GGTCTC 1 cut(s) 858
BsaWI WCCGGW 2 cut(s) 399, 1105
BsaXI ACNNNNNCTCC 3 cut(s) 32, 1376, 1406
Bsc4I CCNNNNNNNGG 3 cut(s) 118, 279, 757
Bse1I ACTGG 2 cut(s) 207, 282
Bse3DI GCAATG 1 cut(s) 1011
BseAI TCCGGA 1 cut(s) 1105
BseGI GGATG 2 cut(s) 26, 625
BseLI CCNNNNNNNGG 3 cut(s) 118, 279, 757
BseMI GCAATG 1 cut(s) 1011
BseMII CTCAG 4 cut(s) 548, 790, 1198, 1262
BseNI ACTGG 2 cut(s) 207, 282
BseRI GAGGAG 3 cut(s) 10, 22, 588
BseSI GKGCMC 1 cut(s) 504
BseXI GCAGC 4 cut(s) 445, 630, 728, 731
BseYI CCCAGC 1 cut(s) 633
BsgI GTGCAG 1 cut(s) 286
Bsh1236I CGCG 2 cut(s) 119, 369
BshFI GGCC 5 cut(s) 206, 581, 638, 912, 924
BshNI GGYRCC 1 cut(s) 747
BsiHKAI GWGCWC 1 cut(s) 563
BsiSI CCGG 4 cut(s) 400, 471, 943, 1106
BslFI GGGAC 2 cut(s) 1165, 1296
BslI CCNNNNNNNGG 3 cut(s) 118, 279, 757
BsmAI GTCTC 2 cut(s) 858, 1396
BsmFI GGGAC 2 cut(s) 1165, 1296
BsmI GAATGC 1 cut(s) 223
BsnI GGCC 5 cut(s) 206, 581, 638, 912, 924
Bso31I GGTCTC 1 cut(s) 858
Bsp1286I GDGCHC 2 cut(s) 504, 563
Bsp13I TCCGGA 1 cut(s) 1105
Bsp143I GATC 6 cut(s) 255, 269, 313, 898, 993, 1371
BspACI CCGC 4 cut(s) 119, 704, 877, 1442
BspANI GGCC 5 cut(s) 206, 581, 638, 912, 924
BspCNI CTCAG 4 cut(s) 549, 789, 1197, 1263
BspEI TCCGGA 1 cut(s) 1105
BspFNI CGCG 2 cut(s) 119, 369
BspLI GGNNCC 5 cut(s) 749, 979, 995, 1104, 1312
BspMAI CTGCAG 1 cut(s) 648
BspMI ACCTGC 1 cut(s) 965
BspPI GGATC 4 cut(s) 264, 308, 988, 1001
BspT107I GGYRCC 1 cut(s) 747
BspTNI GGTCTC 1 cut(s) 858
BsrDI GCAATG 1 cut(s) 1011
BsrI ACTGG 2 cut(s) 207, 282
BssMI GATC 6 cut(s) 255, 269, 313, 898, 993, 1371
BssNI GRCGYC 3 cut(s) 60, 748, 761
Bst4CI ACNGT 3 cut(s) 198, 1163, 1247
Bst6I CTCTTC 2 cut(s) 28, 336
BstACI GRCGYC 3 cut(s) 60, 748, 761
BstC8I GCNNGC 1 cut(s) 1295
BstDEI CTNAG 5 cut(s) 557, 776, 1184, 1271, 1298
BstF5I GGATG 2 cut(s) 26, 625
BstFNI CGCG 2 cut(s) 119, 369
BstH2I RGCGCY 1 cut(s) 751
BstHHI GCGC 1 cut(s) 750
BstKTI GATC 6 cut(s) 258, 272, 316, 901, 996, 1374
BstMAI GTCTC 2 cut(s) 858, 1396
BstMBI GATC 6 cut(s) 255, 269, 313, 898, 993, 1371
BstMWI GCNNNNNNNGC 3 cut(s) 14, 78, 936
BstNSI RCATGY 3 cut(s) 290, 326, 1208
BstSCI CCNGG 1 cut(s) 942
BstSFI CTRYAG 1 cut(s) 644
BstSLI GKGCMC 1 cut(s) 504
BstUI CGCG 2 cut(s) 119, 369
BstV1I GCAGC 4 cut(s) 445, 630, 728, 731
BstV2I GAAGAC 2 cut(s) 55, 90
BstX2I RGATCY 3 cut(s) 269, 993, 1371
BstYI RGATCY 3 cut(s) 269, 993, 1371
BsuI GTATCC 2 cut(s) 131, 1151
BsuRI GGCC 5 cut(s) 206, 581, 638, 912, 924
BtgZI GCGATG 4 cut(s) 757, 822, 1233, 1303
BtsCI GGATG 2 cut(s) 26, 625
BtsI GCAGTG 1 cut(s) 440
BtsIMutI CAGTG 1 cut(s) 440
BveI ACCTGC 1 cut(s) 965
Cac8I GCNNGC 1 cut(s) 1295
CfoI GCGC 1 cut(s) 750
Cfr13I GGNCC 7 cut(s) 636, 649, 910, 1103, 1120, 1310, 1409
CseI GACGC 2 cut(s) 750, 794
Csp6I GTAC 1 cut(s) 813
CviAII CATG 5 cut(s) 259, 287, 323, 752, 1205
CviQI GTAC 1 cut(s) 813
DdeI CTNAG 5 cut(s) 557, 776, 1184, 1271, 1298
DinI GGCGCC 1 cut(s) 749
DpnI GATC 6 cut(s) 257, 271, 315, 900, 995, 1373
DpnII GATC 6 cut(s) 255, 269, 313, 898, 993, 1371
DraI TTTAAA 1 cut(s) 1201
EaeI YGGCCR 1 cut(s) 579
Eam1104I CTCTTC 2 cut(s) 28, 336
EarI CTCTTC 2 cut(s) 28, 336
Eco31I GGTCTC 1 cut(s) 858
Eco47I GGWCC 5 cut(s) 649, 1103, 1120, 1310, 1409
Eco57I CTGAAG 1 cut(s) 58
EcoO109I RGGNCCY 2 cut(s) 1120, 1310
EcoRI GAATTC 1 cut(s) 1447
EcoT22I ATGCAT 1 cut(s) 932
EgeI GGCGCC 1 cut(s) 749
EheI GGCGCC 1 cut(s) 749
FaeI CATG 5 cut(s) 262, 290, 326, 755, 1208
FaqI GGGAC 2 cut(s) 1165, 1296
FatI CATG 5 cut(s) 258, 286, 322, 751, 1204
FblI GTMKAC 1 cut(s) 764
Fnu4HI GCNGC 8 cut(s) 120, 459, 644, 704, 717, 720, 877, 1442
FokI GGATG 2 cut(s) 13, 632
Fsp4HI GCNGC 8 cut(s) 120, 459, 644, 704, 717, 720, 877, 1442
FspBI CTAG 3 cut(s) 726, 738, 1256
GlaI GCGC 1 cut(s) 749
GluI GCNGC 8 cut(s) 120, 459, 644, 704, 717, 720, 877, 1442
GsaI CCCAGC 1 cut(s) 637
HaeII RGCGCY 1 cut(s) 751
HaeIII GGCC 5 cut(s) 206, 581, 638, 912, 924
HapII CCGG 4 cut(s) 400, 471, 943, 1106
HgaI GACGC 2 cut(s) 750, 794
HhaI GCGC 1 cut(s) 750
Hin1I GRCGYC 3 cut(s) 60, 748, 761
Hin1II CATG 5 cut(s) 262, 290, 326, 755, 1208
Hin6I GCGC 1 cut(s) 748
HinP1I GCGC 1 cut(s) 748
HincII GTYRAC 3 cut(s) 532, 793, 1228
HindII GTYRAC 3 cut(s) 532, 793, 1228
HinfI GANTC 4 cut(s) 506, 654, 772, 1049
HpaI GTTAAC 1 cut(s) 793
HpaII CCGG 4 cut(s) 400, 471, 943, 1106
HphI GGTGA 3 cut(s) 167, 262, 395
Hpy166II GTNNAC 6 cut(s) 532, 765, 793, 1228, 1384, 1409
Hpy188I TCNGA 5 cut(s) 77, 363, 511, 558, 1187
Hpy188III TCNNGA 6 cut(s) 67, 239, 328, 841, 1106, 1256
Hpy8I GTNNAC 6 cut(s) 532, 765, 793, 1228, 1384, 1409
Hpy99I CGWCG 1 cut(s) 62
HpyAV CCTTC 2 cut(s) 327, 1145
HpyCH4III ACNGT 3 cut(s) 198, 1163, 1247
HpyCH4IV ACGT 5 cut(s) 60, 406, 885, 964, 1261
HpyCH4V TGCA 9 cut(s) 223, 267, 461, 615, 646, 930, 961, 974, 1004
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 78, 936
HpyF3I CTNAG 5 cut(s) 557, 776, 1184, 1271, 1298
HpySE526I ACGT 5 cut(s) 60, 406, 885, 964, 1261
Hsp92I GRCGYC 3 cut(s) 60, 748, 761
Hsp92II CATG 5 cut(s) 262, 290, 326, 755, 1208
HspAI GCGC 1 cut(s) 748
KasI GGCGCC 1 cut(s) 747
Kpn2I TCCGGA 1 cut(s) 1105
KspAI GTTAAC 1 cut(s) 793
Kzo9I GATC 6 cut(s) 255, 269, 313, 898, 993, 1371
LmnI GCTCC 2 cut(s) 1036, 1174
Lsp1109I GCAGC 4 cut(s) 445, 630, 728, 731
LweI GCATC 1 cut(s) 1210
MaeI CTAG 3 cut(s) 726, 738, 1256
MaeII ACGT 5 cut(s) 60, 406, 885, 964, 1261
MaeIII GTNAC 5 cut(s) 155, 198, 693, 965, 1211
MalI GATC 6 cut(s) 257, 271, 315, 900, 995, 1373
MboI GATC 6 cut(s) 255, 269, 313, 898, 993, 1371
MboII GAAGA 8 cut(s) 15, 55, 95, 265, 350, 353, 398, 863
MfeI CAATTG 2 cut(s) 889, 1053
MflI RGATCY 3 cut(s) 269, 993, 1371
MhlI GDGCHC 2 cut(s) 504, 563
MlsI TGGCCA 1 cut(s) 581
MluCI AATT 7 cut(s) 371, 525, 661, 889, 998, 1053, 1447
MluNI TGGCCA 1 cut(s) 581
Mly113I GGCGCC 1 cut(s) 748
MlyI GAGTC 2 cut(s) 766, 1043
MmeI TCCRAC 2 cut(s) 1014, 1266
Mox20I TGGCCA 1 cut(s) 581
Mph1103I ATGCAT 1 cut(s) 932
MroI TCCGGA 1 cut(s) 1105
MroXI GAANNNNTTC 1 cut(s) 552
MscI TGGCCA 1 cut(s) 581
MseI TTAA 6 cut(s) 125, 429, 450, 540, 792, 1200
Msp20I TGGCCA 1 cut(s) 581
MspA1I CMGCKG 1 cut(s) 1444
MspI CCGG 4 cut(s) 400, 471, 943, 1106
MspR9I CCNGG 1 cut(s) 944
MunI CAATTG 2 cut(s) 889, 1053
Mva1269I GAATGC 1 cut(s) 223
MvnI CGCG 2 cut(s) 119, 369
MwoI GCNNNNNNNGC 3 cut(s) 14, 78, 936
NarI GGCGCC 1 cut(s) 748
NciI CCSGG 1 cut(s) 944
NdeII GATC 6 cut(s) 255, 269, 313, 898, 993, 1371
NlaIII CATG 5 cut(s) 262, 290, 326, 755, 1208
NlaIV GGNNCC 5 cut(s) 749, 979, 995, 1104, 1312
NmuCI GTSAC 3 cut(s) 155, 693, 965
NsiI ATGCAT 1 cut(s) 932
NspI RCATGY 3 cut(s) 290, 326, 1208
PciI ACATGT 2 cut(s) 286, 1204
PctI GAATGC 1 cut(s) 223
PdmI GAANNNNTTC 1 cut(s) 552
PfeI GAWTC 2 cut(s) 506, 654
PkrI GCNGC 8 cut(s) 121, 460, 645, 705, 718, 721, 878, 1443
PleI GAGTC 2 cut(s) 766, 1043
PluTI GGCGCC 1 cut(s) 751
PpsI GAGTC 2 cut(s) 766, 1043
PpuMI RGGWCCY 2 cut(s) 1120, 1310
PscI ACATGT 2 cut(s) 286, 1204
Psp1406I AACGTT 1 cut(s) 1261
Psp5II RGGWCCY 2 cut(s) 1120, 1310
PspFI CCCAGC 1 cut(s) 633
PspN4I GGNNCC 5 cut(s) 749, 979, 995, 1104, 1312
PspPI GGNCC 7 cut(s) 636, 649, 910, 1103, 1120, 1310, 1409
PspPPI RGGWCCY 2 cut(s) 1120, 1310
PstI CTGCAG 1 cut(s) 648
PsuI RGATCY 3 cut(s) 269, 993, 1371
RsaI GTAC 1 cut(s) 814
RsaNI GTAC 1 cut(s) 813
SaqAI TTAA 6 cut(s) 125, 429, 450, 540, 792, 1200
SatI GCNGC 8 cut(s) 120, 459, 644, 704, 717, 720, 877, 1442
Sau3AI GATC 6 cut(s) 255, 269, 313, 898, 993, 1371
Sau96I GGNCC 7 cut(s) 636, 649, 910, 1103, 1120, 1310, 1409
SchI GAGTC 2 cut(s) 766, 1043
ScrFI CCNGG 1 cut(s) 944
SduI GDGCHC 2 cut(s) 504, 563
SfaNI GCATC 1 cut(s) 1210
SfcI CTRYAG 1 cut(s) 644
SfoI GGCGCC 1 cut(s) 749
SinI GGWCC 5 cut(s) 649, 1103, 1120, 1310, 1409
SmlI CTYRAG 2 cut(s) 67, 1028
SmoI CTYRAG 2 cut(s) 67, 1028
SpeI ACTAGT 1 cut(s) 725
Sse9I AATT 7 cut(s) 371, 525, 661, 889, 998, 1053, 1447
SsiI CCGC 4 cut(s) 119, 704, 877, 1442
SspDI GGCGCC 1 cut(s) 747
SspI AATATT 2 cut(s) 300, 1331
SspMI CTAG 3 cut(s) 726, 738, 1256
StyD4I CCNGG 1 cut(s) 942
TaaI ACNGT 3 cut(s) 198, 1163, 1247
TaiI ACGT 5 cut(s) 63, 409, 888, 967, 1264
TaqI TCGA 4 cut(s) 227, 849, 897, 1249
TaqII GACCGA 2 cut(s) 666, 1426
TasI AATT 7 cut(s) 371, 525, 661, 889, 998, 1053, 1447
TauI GCSGC 4 cut(s) 122, 706, 879, 1444
TfiI GAWTC 2 cut(s) 506, 654
Tru1I TTAA 6 cut(s) 125, 429, 450, 540, 792, 1200
Tru9I TTAA 6 cut(s) 125, 429, 450, 540, 792, 1200
TscAI CASTG 1 cut(s) 440
TseFI GTSAC 3 cut(s) 155, 693, 965
TseI GCWGC 4 cut(s) 458, 643, 716, 719
Tsp45I GTSAC 3 cut(s) 155, 693, 965
TspDTI ATGAA 5 cut(s) 15, 200, 429, 1354, 1440
TspGWI ACGGA 1 cut(s) 560
TspRI CASTG 1 cut(s) 440
VpaK11BI GGWCC 5 cut(s) 649, 1103, 1120, 1310, 1409
XapI RAATTY 1 cut(s) 1447
XbaI TCTAGA 1 cut(s) 1255
XceI RCATGY 3 cut(s) 290, 326, 1208
XmiI GTMKAC 1 cut(s) 764
XmnI GAANNNNTTC 1 cut(s) 552
XspI CTAG 3 cut(s) 726, 738, 1256
ZraI GACGTC 1 cut(s) 61
Zsp2I ATGCAT 1 cut(s) 932
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.