Rroxscaffold_1G00052690

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000095
Physical Location & Seq
Forward (+)
73426673 .. 73428871
2199 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00052690.1

Sequence Viewer

Length: 1461 bp
ATGAGGAAGAGAAAGAAAAACAATGATATTGGAAATAACTTGGTGGACAGAATTAGTGTGTTGCCTGATGAAATTTTAGTAAGTATACTCTCTCTATTGCCCCTGAAGGAAGCACAAGCTACTAGTGTTCTTTCTAGGCGATGGCGCCATATGTGGGCGTCTACTGTTACTCTTAACTTTGATAGTGCCCCAACCATGTGGAGTTTCGTACACAGCTCTATATCTTCCAAGTCCTACAACCTCAAATCGAAAGTAGAAGGCAAAATCAGTAGGTTCGTCCCTTGGATTAATAGTGTGGTGAAACAGCATAATGTCCCGTGCATTGAACTGTTCAGGGTTCGTTCTCATCTAAATCAAGAATTCGCAGGTTCCATTGATAAATGGATCCAATTTGCAATGGAAAAGGGTGTTCAAACACTGGAGTTGGACTTCTCAGTCTTGGGATGTGTTCCTCCGATGTATACTTTCCCCCATGATCTTATCAAGCACTTATGTGATGGACATATTCCAATTCAAGGCCCTTGTGCATGCATTGGTTTGAAGTCCCTCAAAGTTCTTAATTTCCATTGTGTTAATATCGCAGGAGAAGTTCTTGAGTACTACTTGTCTAATTGTCCAGTTCTTGAACAACTATTAGTGCGTGATTCTCCATCTTTGAGTAACCTAAGAGTTGTTGGTCCATCAGTTGCATTGAAGTATCTACTCATAGAAAACTGTACAAACATCAAAAGCATTGAGATTTGTGACACAAACCTCGTTTCATTTATATATGATGGAGATTGCAGAAATTTGCTTCTTAGAAATGTACCGCTGCTTGTTGAGGTATCAGTTAGTATGCCTTCCTGTAAGGACTGCATAGAGGTTGCCTTCACTCAACTCTCATGCCGTCTTTCTCAGTTAAAGATTCTGAAACTGAATCACCTTGGGAGATACACAAGAGATCGTGTTCCTCAATACCAGAAAGATCTTTTGTTTCCTGTACTAGCAAGTCTCAAACATTTGGAATTATGTCTCTACACAGAAGATGATTGTATTCTTCTTCAATTAACTTCCTTCCTTAAAGCCACTCCTAACTTGGAGGGTCTTGTGCTTGTGTTGAATCCAGCATTTCCTTGGATAAGAGAAATTAAATATAAAGCTGCCAAATGCTCCCATCAACATCTCCAGGTAGTGCAACTAGTAGCATATGATGTAGTACATGGTTCTAGCGCATATCATCTCGAAGTTGTAAAGTACCTGATCAAGAGTGCTGTTGAACTTAAGAAAATCTTAATTACTCCTAATGCTGACGATGAGGAAAAGAAGGACAGAGTAAAGAAGGATATCGAAGAAGAGGTGAAGAAACAGAAGGCAAGAAATCATTCTAGAAACCAGCTTATAGAAGGAGTTCCTTTAACCATAGCTTTTGTTGAATATAATGAGTATTATGAGACGAAGTCCAAATTTGCGTGCCTGTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

486

Amino Acids

55.41

Weight (kDa)

8.61

Isoelectric Point (pI)

44.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 18 - 54 2.5e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 118 - 430 4.1e-23 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 125 - 247 2e-07 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 434
Acc36I ACCTGC 1 cut(s) 356
AccB1I GGYRCC 1 cut(s) 144
AccI GTMKAC 3 cut(s) 85, 161, 461
AciI CCGC 1 cut(s) 809
AclWI GGATC 2 cut(s) 379, 392
AcsI RAATTY 4 cut(s) 72, 359, 787, 1442
AcuI CTGAAG 1 cut(s) 125
AcyI GRCGYC 2 cut(s) 145, 158
AfaI GTAC 7 cut(s) 210, 599, 718, 807, 981, 1197, 1235
AfiI CCNNNNNNNGG 2 cut(s) 154, 515
AflII CTTAAG 1 cut(s) 1259
AhlI ACTAGT 2 cut(s) 122, 1177
AjnI CCWGG 1 cut(s) 1164
AleI CACNNNNGTG 1 cut(s) 492
AluBI AGCT 5 cut(s) 119, 216, 1139, 1375, 1403
AluI AGCT 5 cut(s) 119, 216, 1139, 1375, 1403
Alw26I GTCTC 3 cut(s) 995, 1016, 1424
AlwI GGATC 2 cut(s) 379, 392
AoxI GGCC 1 cut(s) 517
ApeKI GCWGC 2 cut(s) 811, 1139
ApoI RAATTY 4 cut(s) 72, 359, 787, 1442
AseI ATTAAT 1 cut(s) 288
Asp700I GAANNNNTTC 2 cut(s) 1360, 1386
AspLEI GCGC 2 cut(s) 147, 1211
AspS9I GGNCC 2 cut(s) 518, 677
AsuHPI GGTGA 3 cut(s) 310, 911, 1348
AvaII GGWCC 1 cut(s) 677
BaeGI GKGCMC 1 cut(s) 190
BamHI GGATCC 1 cut(s) 384
BanI GGYRCC 1 cut(s) 144
BbvI GCAGC 2 cut(s) 798, 1126
BccI CCATC 6 cut(s) 135, 491, 658, 688, 767, 1161
BceAI ACGGC 1 cut(s) 870
BciT130I CCWGG 1 cut(s) 1166
BclI TGATCA 1 cut(s) 1239
BcoDI GTCTC 3 cut(s) 995, 1016, 1424
BcuI ACTAGT 2 cut(s) 122, 1177
BfaI CTAG 6 cut(s) 123, 135, 983, 1178, 1206, 1365
BfoI RGCGCY 1 cut(s) 148
BfrI CTTAAG 1 cut(s) 1259
BfuAI ACCTGC 1 cut(s) 356
BglII AGATCT 1 cut(s) 964
BisI GCNGC 2 cut(s) 812, 1140
BlsI GCNGC 2 cut(s) 813, 1141
BmcAI AGTACT 1 cut(s) 599
Bme1390I CCNGG 1 cut(s) 1166
Bme18I GGWCC 1 cut(s) 677
BmgT120I GGNCC 2 cut(s) 518, 677
BmiI GGNNCC 3 cut(s) 146, 370, 386
BmrFI CCNGG 1 cut(s) 1166
BpmI CTGGAG 2 cut(s) 440, 1148
BpuEI CTTGAG 1 cut(s) 614
BsaHI GRCGYC 2 cut(s) 145, 158
BsaJI CCNNGG 3 cut(s) 281, 922, 1112
Bsc4I CCNNNNNNNGG 2 cut(s) 154, 515
Bse1I ACTGG 2 cut(s) 423, 617
Bse3DI GCAATG 1 cut(s) 402
BseBI CCWGG 1 cut(s) 1166
BseDI CCNNGG 3 cut(s) 281, 922, 1112
BseGI GGATG 1 cut(s) 449
BseLI CCNNNNNNNGG 2 cut(s) 154, 515
BseMI GCAATG 1 cut(s) 402
BseMII CTCAG 2 cut(s) 447, 908
BseNI ACTGG 2 cut(s) 423, 617
BseSI GKGCMC 1 cut(s) 190
BseXI GCAGC 2 cut(s) 798, 1126
BshFI GGCC 1 cut(s) 519
BshNI GGYRCC 1 cut(s) 144
BslFI GGGAC 3 cut(s) 263, 299, 529
BslI CCNNNNNNNGG 2 cut(s) 154, 515
BsmAI GTCTC 3 cut(s) 995, 1016, 1424
BsmBI CGTCTC 1 cut(s) 1424
BsmFI GGGAC 3 cut(s) 263, 299, 529
BsnI GGCC 1 cut(s) 519
Bsp1286I GDGCHC 1 cut(s) 190
Bsp1407I TGTACA 1 cut(s) 716
Bsp143I GATC 5 cut(s) 384, 475, 940, 964, 1239
BspACI CCGC 1 cut(s) 809
BspANI GGCC 1 cut(s) 519
BspCNI CTCAG 2 cut(s) 446, 907
BspLI GGNNCC 3 cut(s) 146, 370, 386
BspMI ACCTGC 1 cut(s) 356
BspPI GGATC 2 cut(s) 379, 392
BspT107I GGYRCC 1 cut(s) 144
BspTI CTTAAG 1 cut(s) 1259
BsrDI GCAATG 1 cut(s) 402
BsrGI TGTACA 1 cut(s) 716
BsrI ACTGG 2 cut(s) 423, 617
BssECI CCNNGG 3 cut(s) 281, 922, 1112
BssMI GATC 5 cut(s) 384, 475, 940, 964, 1239
BssNAI GTATAC 2 cut(s) 86, 462
BssNI GRCGYC 2 cut(s) 145, 158
BssT1I CCWWGG 3 cut(s) 281, 922, 1112
Bst1107I GTATAC 2 cut(s) 86, 462
Bst2UI CCWGG 1 cut(s) 1166
Bst4CI ACNGT 3 cut(s) 166, 330, 716
Bst6I CTCTTC 2 cut(s) 2, 1326
BstACI GRCGYC 2 cut(s) 145, 158
BstAFI CTTAAG 1 cut(s) 1259
BstAUI TGTACA 1 cut(s) 716
BstC8I GCNNGC 2 cut(s) 529, 1450
BstDEI CTNAG 4 cut(s) 433, 665, 797, 894
BstF5I GGATG 1 cut(s) 449
BstH2I RGCGCY 1 cut(s) 148
BstHHI GCGC 2 cut(s) 147, 1211
BstKTI GATC 5 cut(s) 387, 478, 943, 967, 1242
BstMAI GTCTC 3 cut(s) 995, 1016, 1424
BstMBI GATC 5 cut(s) 384, 475, 940, 964, 1239
BstNI CCWGG 1 cut(s) 1166
BstNSI RCATGY 1 cut(s) 531
BstSCI CCNGG 1 cut(s) 1164
BstSLI GKGCMC 1 cut(s) 190
BstV1I GCAGC 2 cut(s) 798, 1126
BstX2I RGATCY 2 cut(s) 384, 964
BstXI CCANNNNNNTGG 1 cut(s) 198
BstYI RGATCY 2 cut(s) 384, 964
BstZ17I GTATAC 2 cut(s) 86, 462
BsuRI GGCC 1 cut(s) 519
BtgZI GCGATG 1 cut(s) 154
BtsCI GGATG 1 cut(s) 449
BtsIMutI CAGTG 1 cut(s) 416
BveI ACCTGC 1 cut(s) 356
Cac8I GCNNGC 2 cut(s) 529, 1450
CfoI GCGC 2 cut(s) 147, 1211
Cfr13I GGNCC 2 cut(s) 518, 677
CseI GACGC 1 cut(s) 147
Csp6I GTAC 7 cut(s) 209, 598, 717, 806, 980, 1196, 1234
CviAII CATG 5 cut(s) 196, 473, 528, 882, 1199
CviJI RGCY 7 cut(s) 119, 216, 519, 1064, 1139, 1375, 1403
CviKI_1 RGCY 7 cut(s) 119, 216, 519, 1064, 1139, 1375, 1403
CviQI GTAC 7 cut(s) 209, 598, 717, 806, 980, 1196, 1234
DdeI CTNAG 4 cut(s) 433, 665, 797, 894
DinI GGCGCC 1 cut(s) 146
DpnI GATC 5 cut(s) 386, 477, 942, 966, 1241
DpnII GATC 5 cut(s) 384, 475, 940, 964, 1239
DrdI GACNNNNNNGTC 1 cut(s) 434
DseDI GACNNNNNNGTC 1 cut(s) 434
Eam1104I CTCTTC 2 cut(s) 2, 1326
EarI CTCTTC 2 cut(s) 2, 1326
Eco130I CCWWGG 3 cut(s) 281, 922, 1112
Eco32I GATATC 1 cut(s) 1324
Eco47I GGWCC 1 cut(s) 677
Eco57I CTGAAG 1 cut(s) 125
EcoO109I RGGNCCY 1 cut(s) 518
EcoRI GAATTC 1 cut(s) 359
EcoRII CCWGG 1 cut(s) 1164
EcoRV GATATC 1 cut(s) 1324
EcoT14I CCWWGG 3 cut(s) 281, 922, 1112
EcoT22I ATGCAT 1 cut(s) 533
EgeI GGCGCC 1 cut(s) 146
EheI GGCGCC 1 cut(s) 146
ErhI CCWWGG 3 cut(s) 281, 922, 1112
Esp3I CGTCTC 1 cut(s) 1424
FaeI CATG 5 cut(s) 199, 476, 531, 885, 1202
FalI AAGNNNNNCTT 2 cut(s) 1253, 1285
FaqI GGGAC 3 cut(s) 263, 299, 529
FatI CATG 5 cut(s) 195, 472, 527, 881, 1198
FauNDI CATATG 2 cut(s) 150, 1186
FbaI TGATCA 1 cut(s) 1239
FblI GTMKAC 3 cut(s) 85, 161, 461
Fnu4HI GCNGC 2 cut(s) 812, 1140
FokI GGATG 1 cut(s) 456
Fsp4HI GCNGC 2 cut(s) 812, 1140
FspBI CTAG 6 cut(s) 123, 135, 983, 1178, 1206, 1365
GlaI GCGC 2 cut(s) 146, 1210
GluI GCNGC 2 cut(s) 812, 1140
GsuI CTGGAG 2 cut(s) 440, 1148
HaeII RGCGCY 1 cut(s) 148
HaeIII GGCC 1 cut(s) 519
HgaI GACGC 1 cut(s) 147
HhaI GCGC 2 cut(s) 147, 1211
Hin1I GRCGYC 2 cut(s) 145, 158
Hin1II CATG 5 cut(s) 199, 476, 531, 885, 1202
Hin6I GCGC 2 cut(s) 145, 1209
HinP1I GCGC 2 cut(s) 145, 1209
HinfI GANTC 4 cut(s) 644, 904, 916, 1099
HphI GGTGA 3 cut(s) 310, 911, 1348
Hpy166II GTNNAC 5 cut(s) 46, 86, 162, 211, 462
Hpy188I TCNGA 2 cut(s) 456, 909
Hpy188III TCNNGA 6 cut(s) 356, 593, 623, 1220, 1243, 1365
Hpy8I GTNNAC 5 cut(s) 46, 86, 162, 211, 462
HpyAV CCTTC 9 cut(s) 100, 251, 849, 877, 1063, 1297, 1312, 1342, 1376
HpyCH4III ACNGT 3 cut(s) 166, 330, 716
HpyCH4V TGCA 8 cut(s) 321, 395, 527, 531, 689, 783, 855, 1174
HpyF3I CTNAG 4 cut(s) 433, 665, 797, 894
Hsp92I GRCGYC 2 cut(s) 145, 158
Hsp92II CATG 5 cut(s) 199, 476, 531, 885, 1202
HspAI GCGC 2 cut(s) 145, 1209
KasI GGCGCC 1 cut(s) 144
Ksp22I TGATCA 1 cut(s) 1239
Kzo9I GATC 5 cut(s) 384, 475, 940, 964, 1239
LmnI GCTCC 1 cut(s) 1154
Lsp1109I GCAGC 2 cut(s) 798, 1126
MaeI CTAG 6 cut(s) 123, 135, 983, 1178, 1206, 1365
MaeIII GTNAC 3 cut(s) 166, 659, 743
MalI GATC 5 cut(s) 386, 477, 942, 966, 1241
MboI GATC 5 cut(s) 384, 475, 940, 964, 1239
MboII GAAGA 8 cut(s) 19, 216, 1028, 1031, 1034, 1340, 1343, 1351
MflI RGATCY 2 cut(s) 384, 964
MhlI GDGCHC 1 cut(s) 190
Mly113I GGCGCC 1 cut(s) 145
MmeI TCCRAC 1 cut(s) 405
Mph1103I ATGCAT 1 cut(s) 533
MroXI GAANNNNTTC 2 cut(s) 1360, 1386
MslI CAYNNNNRTG 1 cut(s) 492
MspA1I CMGCKG 1 cut(s) 811
MspCI CTTAAG 1 cut(s) 1259
MspR9I CCNGG 1 cut(s) 1166
MvaI CCWGG 1 cut(s) 1166
NarI GGCGCC 1 cut(s) 145
NdeI CATATG 2 cut(s) 150, 1186
NdeII GATC 5 cut(s) 384, 475, 940, 964, 1239
NlaIII CATG 5 cut(s) 199, 476, 531, 885, 1202
NlaIV GGNNCC 3 cut(s) 146, 370, 386
NmuCI GTSAC 1 cut(s) 743
NsiI ATGCAT 1 cut(s) 533
NspI RCATGY 1 cut(s) 531
OliI CACNNNNGTG 1 cut(s) 492
PaeI GCATGC 1 cut(s) 531
PdmI GAANNNNTTC 2 cut(s) 1360, 1386
PfeI GAWTC 4 cut(s) 644, 904, 916, 1099
PflFI GACNNNGTC 1 cut(s) 1435
PkrI GCNGC 2 cut(s) 813, 1141
PluTI GGCGCC 1 cut(s) 148
PshBI ATTAAT 1 cut(s) 288
Psp6I CCWGG 1 cut(s) 1164
PspGI CCWGG 1 cut(s) 1164
PspN4I GGNNCC 3 cut(s) 146, 370, 386
PspPI GGNCC 2 cut(s) 518, 677
PsuI RGATCY 2 cut(s) 384, 964
PsyI GACNNNGTC 1 cut(s) 1435
RsaI GTAC 7 cut(s) 210, 599, 718, 807, 981, 1197, 1235
RsaNI GTAC 7 cut(s) 209, 598, 717, 806, 980, 1196, 1234
RseI CAYNNNNRTG 1 cut(s) 492
SatI GCNGC 2 cut(s) 812, 1140
Sau3AI GATC 5 cut(s) 384, 475, 940, 964, 1239
Sau96I GGNCC 2 cut(s) 518, 677
ScaI AGTACT 1 cut(s) 599
ScrFI CCNGG 1 cut(s) 1166
SduI GDGCHC 1 cut(s) 190
SfoI GGCGCC 1 cut(s) 146
SinI GGWCC 1 cut(s) 677
SmiMI CAYNNNNRTG 1 cut(s) 492
SmlI CTYRAG 2 cut(s) 593, 1259
SmoI CTYRAG 2 cut(s) 593, 1259
SpeI ACTAGT 2 cut(s) 122, 1177
SphI GCATGC 1 cut(s) 531
SsiI CCGC 1 cut(s) 809
SspDI GGCGCC 1 cut(s) 144
SspMI CTAG 6 cut(s) 123, 135, 983, 1178, 1206, 1365
StyD4I CCNGG 1 cut(s) 1164
StyI CCWWGG 3 cut(s) 281, 922, 1112
TaaI ACNGT 3 cut(s) 166, 330, 716
TaqI TCGA 3 cut(s) 248, 1221, 1326
TatI WGTACW 4 cut(s) 597, 716, 979, 1195
TfiI GAWTC 4 cut(s) 644, 904, 916, 1099
TscAI CASTG 1 cut(s) 423
TseFI GTSAC 1 cut(s) 743
TseI GCWGC 2 cut(s) 811, 1139
Tsp45I GTSAC 1 cut(s) 743
TspDTI ATGAA 2 cut(s) 84, 750
TspRI CASTG 1 cut(s) 423
Tth111I GACNNNGTC 1 cut(s) 1435
Vha464I CTTAAG 1 cut(s) 1259
VpaK11BI GGWCC 1 cut(s) 677
VspI ATTAAT 1 cut(s) 288
XapI RAATTY 4 cut(s) 72, 359, 787, 1442
XbaI TCTAGA 1 cut(s) 1364
XceI RCATGY 1 cut(s) 531
XcmI CCANNNNNNNNNTGG 2 cut(s) 1072, 1110
XmiI GTMKAC 3 cut(s) 85, 161, 461
XmnI GAANNNNTTC 2 cut(s) 1360, 1386
XspI CTAG 6 cut(s) 123, 135, 983, 1178, 1206, 1365
ZrmI AGTACT 1 cut(s) 599
Zsp2I ATGCAT 1 cut(s) 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.