Rorug02G0484900

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000095
Physical Location & Seq
Forward (+)
61462733 .. 61464672
1940 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0484900.1

Sequence Viewer

Length: 654 bp
ATGAGAGTTTGCTGCTCGTCCGGCGGCGCCTCCGCGTCGACCGTGGCTTCCCCCCTCAGCGACGAGTGGCAGGTAGAGGTCCAGGTGTGGATGGGGAAATCGGCGGCGGCGCAGGCTTGGTGCAAGGGGCCAGAGGCCAGATTATGGTTGCGCAATGCCATGGATCGTATGGCGCTAGTCTCTGTTCGGAGGTGGGTCGCTCGGCGATGGTTGCAGAGGTGGGTTCGGGCTCCTAGGCGGATGGACACAGATGGGTGGACCTATTTCATTCCGAGGTGGAAGGGCACGGTGATTCCCTTCCTGCTTCTCGATGGTTTGGATTGGAATGGATCTGTTACTAGGTCTGGATCCGGCCGACAACAGGCAGGTGAATCAGTGTGGCTTGTGGTATTGGTTGGGTATCTCCGGGGAGATGAGCTCAAAGGGAAAGATTTGCGGCGGTGGTCTGCTGGCGGGGACATTGGGGAGAGGGAAGATGACTGTAATGGCTTTGTTTTGGCCTTGTTTAGAGTTTTATTTTGGGTTAGGCTTTTGATTTTGGGTGATTTCGGCTCCGCCGTGTTCTTCGACTCCGGCGACGTTTCCGGCACTTCTGCGCTTGGCTTCTGGCTTGAATGCTTCTGTAGGCGAGGGCTGACCTTGGTTTGGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

217

Amino Acids

24.5

Weight (kDa)

9.07

Isoelectric Point (pI)

50.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 356
Acc16I TGCGCA 1 cut(s) 152
Acc36I ACCTGC 2 cut(s) 61, 356
AccB1I GGYRCC 1 cut(s) 26
AccB7I CCANNNNNTGG 1 cut(s) 144
AccI GTMKAC 1 cut(s) 38
AccII CGCG 1 cut(s) 35
AciI CCGC 9 cut(s) 24, 33, 104, 107, 238, 436, 439, 453, 555
AclWI GGATC 4 cut(s) 171, 337, 342, 355
AcoI YGGCCR 1 cut(s) 352
AcyI GRCGYC 1 cut(s) 27
AfiI CCNNNNNNNGG 3 cut(s) 144, 361, 645
AgsI TTSAA 1 cut(s) 614
AjnI CCWGG 1 cut(s) 81
AluBI AGCT 1 cut(s) 418
AluI AGCT 1 cut(s) 418
Alw21I GWGCWC 1 cut(s) 420
Alw26I GTCTC 1 cut(s) 184
AlwI GGATC 4 cut(s) 171, 337, 342, 355
AoxI GGCC 4 cut(s) 128, 135, 352, 498
ApeKI GCWGC 1 cut(s) 12
AspA2I CCTAGG 1 cut(s) 233
AspLEI GCGC 5 cut(s) 29, 112, 153, 175, 598
AspS9I GGNCC 3 cut(s) 79, 128, 258
AsuC2I CCSGG 1 cut(s) 407
AsuHPI GGTGA 3 cut(s) 301, 380, 554
AvaII GGWCC 2 cut(s) 79, 258
AvrII CCTAGG 1 cut(s) 233
BaeGI GKGCMC 1 cut(s) 287
BamHI GGATCC 1 cut(s) 347
BanI GGYRCC 1 cut(s) 26
BanII GRGCYC 2 cut(s) 232, 420
Bbv12I GWGCWC 1 cut(s) 420
BbvCI CCTCAGC 1 cut(s) 56
BccI CCATC 5 cut(s) 85, 201, 235, 245, 305
BceAI ACGGC 1 cut(s) 542
BciT130I CCWGG 1 cut(s) 83
BcnI CCSGG 1 cut(s) 407
BcoDI GTCTC 1 cut(s) 184
BfaI CTAG 3 cut(s) 176, 234, 339
BfmI CTRYAG 1 cut(s) 622
BfoI RGCGCY 2 cut(s) 30, 176
BfuAI ACCTGC 2 cut(s) 61, 356
BisI GCNGC 5 cut(s) 13, 25, 105, 108, 437
BlnI CCTAGG 1 cut(s) 233
BlsI GCNGC 5 cut(s) 14, 26, 106, 109, 438
Bme1390I CCNGG 2 cut(s) 83, 407
Bme18I GGWCC 2 cut(s) 79, 258
BmgT120I GGNCC 3 cut(s) 79, 128, 258
BmiI GGNNCC 5 cut(s) 28, 129, 231, 349, 553
BmrFI CCNGG 2 cut(s) 83, 407
BplI GAGNNNNNCTC 2 cut(s) 402, 434
Bpu10I CCTNAGC 1 cut(s) 56
BpuMI CCSGG 1 cut(s) 407
BsaHI GRCGYC 1 cut(s) 27
BsaJI CCNNGG 6 cut(s) 42, 159, 233, 272, 406, 639
Bsc4I CCNNNNNNNGG 3 cut(s) 144, 361, 645
Bse3DI GCAATG 1 cut(s) 160
BseBI CCWGG 1 cut(s) 83
BseDI CCNNGG 6 cut(s) 42, 159, 233, 272, 406, 639
BseGI GGATG 2 cut(s) 96, 246
BseLI CCNNNNNNNGG 3 cut(s) 144, 361, 645
BseMI GCAATG 1 cut(s) 160
BseMII CTCAG 1 cut(s) 70
BseSI GKGCMC 1 cut(s) 287
BseX3I CGGCCG 1 cut(s) 352
Bsh1236I CGCG 1 cut(s) 35
Bsh1285I CGRYCG 2 cut(s) 42, 355
BshFI GGCC 4 cut(s) 130, 137, 354, 500
BshNI GGYRCC 1 cut(s) 26
BsiEI CGRYCG 2 cut(s) 42, 355
BsiHKAI GWGCWC 1 cut(s) 420
BsiSI CCGG 5 cut(s) 21, 351, 406, 573, 585
BslFI GGGAC 1 cut(s) 470
BslI CCNNNNNNNGG 3 cut(s) 144, 361, 645
BsmAI GTCTC 1 cut(s) 184
BsmFI GGGAC 1 cut(s) 470
BsmI GAATGC 1 cut(s) 620
BsnI GGCC 4 cut(s) 130, 137, 354, 500
Bsp1286I GDGCHC 3 cut(s) 232, 287, 420
Bsp143I GATC 3 cut(s) 163, 329, 347
Bsp19I CCATGG 1 cut(s) 159
BspACI CCGC 9 cut(s) 24, 33, 104, 107, 238, 436, 439, 453, 555
BspANI GGCC 4 cut(s) 130, 137, 354, 500
BspCNI CTCAG 1 cut(s) 69
BspFNI CGCG 1 cut(s) 35
BspLI GGNNCC 5 cut(s) 28, 129, 231, 349, 553
BspMI ACCTGC 2 cut(s) 61, 356
BspPI GGATC 4 cut(s) 171, 337, 342, 355
BspT107I GGYRCC 1 cut(s) 26
BsrDI GCAATG 1 cut(s) 160
BssECI CCNNGG 6 cut(s) 42, 159, 233, 272, 406, 639
BssMI GATC 3 cut(s) 163, 329, 347
BssNI GRCGYC 1 cut(s) 27
BssT1I CCWWGG 3 cut(s) 159, 233, 639
Bst2UI CCWGG 1 cut(s) 83
Bst4CI ACNGT 3 cut(s) 43, 289, 482
BstACI GRCGYC 1 cut(s) 27
BstC8I GCNNGC 2 cut(s) 114, 451
BstDEI CTNAG 1 cut(s) 56
BstDSI CCRYGG 2 cut(s) 42, 159
BstF5I GGATG 2 cut(s) 96, 246
BstFNI CGCG 1 cut(s) 35
BstH2I RGCGCY 2 cut(s) 30, 176
BstHHI GCGC 5 cut(s) 29, 112, 153, 175, 598
BstKTI GATC 3 cut(s) 166, 332, 350
BstMAI GTCTC 1 cut(s) 184
BstMBI GATC 3 cut(s) 163, 329, 347
BstMCI CGRYCG 2 cut(s) 42, 355
BstMWI GCNNNNNNNGC 3 cut(s) 21, 113, 211
BstNI CCWGG 1 cut(s) 83
BstSCI CCNGG 2 cut(s) 81, 405
BstSFI CTRYAG 1 cut(s) 622
BstSLI GKGCMC 1 cut(s) 287
BstUI CGCG 1 cut(s) 35
BstX2I RGATCY 2 cut(s) 329, 347
BstYI RGATCY 2 cut(s) 329, 347
BstZI CGGCCG 1 cut(s) 352
BsuRI GGCC 4 cut(s) 130, 137, 354, 500
BtgI CCRYGG 2 cut(s) 42, 159
BtgZI GCGATG 1 cut(s) 220
BtsCI GGATG 2 cut(s) 96, 246
BtsIMutI CAGTG 1 cut(s) 381
BveI ACCTGC 2 cut(s) 61, 356
Cac8I GCNNGC 2 cut(s) 114, 451
CfoI GCGC 5 cut(s) 29, 112, 153, 175, 598
Cfr13I GGNCC 3 cut(s) 79, 128, 258
CseI GACGC 1 cut(s) 24
CviAII CATG 1 cut(s) 160
DdeI CTNAG 1 cut(s) 56
DinI GGCGCC 1 cut(s) 28
DpnI GATC 3 cut(s) 165, 331, 349
DpnII GATC 3 cut(s) 163, 329, 347
EaeI YGGCCR 1 cut(s) 352
EagI CGGCCG 1 cut(s) 352
EciI GGCGGA 2 cut(s) 253, 544
Ecl136II GAGCTC 1 cut(s) 418
EclXI CGGCCG 1 cut(s) 352
Eco130I CCWWGG 3 cut(s) 159, 233, 639
Eco24I GRGCYC 2 cut(s) 232, 420
Eco47I GGWCC 2 cut(s) 79, 258
Eco52I CGGCCG 1 cut(s) 352
Eco53kI GAGCTC 1 cut(s) 418
EcoICRI GAGCTC 1 cut(s) 418
EcoRII CCWGG 1 cut(s) 81
EcoT14I CCWWGG 3 cut(s) 159, 233, 639
EcoT38I GRGCYC 2 cut(s) 232, 420
EgeI GGCGCC 1 cut(s) 28
EheI GGCGCC 1 cut(s) 28
ErhI CCWWGG 3 cut(s) 159, 233, 639
FaeI CATG 1 cut(s) 163
FaiI YATR 3 cut(s) 145, 161, 170
FaqI GGGAC 1 cut(s) 470
FatI CATG 1 cut(s) 159
FauI CCCGC 1 cut(s) 446
FblI GTMKAC 1 cut(s) 38
Fnu4HI GCNGC 5 cut(s) 13, 25, 105, 108, 437
FokI GGATG 2 cut(s) 103, 253
FriOI GRGCYC 2 cut(s) 232, 420
Fsp4HI GCNGC 5 cut(s) 13, 25, 105, 108, 437
FspBI CTAG 3 cut(s) 176, 234, 339
FspI TGCGCA 1 cut(s) 152
GlaI GCGC 5 cut(s) 28, 111, 152, 174, 597
GluI GCNGC 5 cut(s) 13, 25, 105, 108, 437
HaeII RGCGCY 2 cut(s) 30, 176
HaeIII GGCC 4 cut(s) 130, 137, 354, 500
HapII CCGG 5 cut(s) 21, 351, 406, 573, 585
HgaI GACGC 1 cut(s) 24
HhaI GCGC 5 cut(s) 29, 112, 153, 175, 598
Hin1I GRCGYC 1 cut(s) 27
Hin1II CATG 1 cut(s) 163
Hin6I GCGC 5 cut(s) 27, 110, 151, 173, 596
HinP1I GCGC 5 cut(s) 27, 110, 151, 173, 596
HincII GTYRAC 1 cut(s) 39
HindII GTYRAC 1 cut(s) 39
HinfI GANTC 3 cut(s) 292, 371, 569
HpaII CCGG 5 cut(s) 21, 351, 406, 573, 585
HphI GGTGA 3 cut(s) 301, 380, 554
Hpy166II GTNNAC 2 cut(s) 39, 258
Hpy188I TCNGA 2 cut(s) 189, 273
Hpy188III TCNNGA 2 cut(s) 308, 345
Hpy8I GTNNAC 2 cut(s) 39, 258
Hpy99I CGWCG 3 cut(s) 40, 65, 581
HpyAV CCTTC 2 cut(s) 274, 307
HpyCH4III ACNGT 3 cut(s) 43, 289, 482
HpyCH4IV ACGT 1 cut(s) 579
HpyCH4V TGCA 2 cut(s) 123, 214
HpyF10VI GCNNNNNNNGC 3 cut(s) 21, 113, 211
HpyF3I CTNAG 1 cut(s) 56
HpySE526I ACGT 1 cut(s) 579
Hsp92I GRCGYC 1 cut(s) 27
Hsp92II CATG 1 cut(s) 163
HspAI GCGC 5 cut(s) 27, 110, 151, 173, 596
KasI GGCGCC 1 cut(s) 26
Kzo9I GATC 3 cut(s) 163, 329, 347
LmnI GCTCC 2 cut(s) 235, 557
MaeI CTAG 3 cut(s) 176, 234, 339
MaeII ACGT 1 cut(s) 579
MaeIII GTNAC 1 cut(s) 334
MalI GATC 3 cut(s) 165, 331, 349
MboI GATC 3 cut(s) 163, 329, 347
MboII GAAGA 2 cut(s) 485, 556
MflI RGATCY 2 cut(s) 329, 347
MhlI GDGCHC 3 cut(s) 232, 287, 420
Mly113I GGCGCC 1 cut(s) 27
MlyI GAGTC 1 cut(s) 563
MnlI CCTC 9 cut(s) 40, 65, 70, 127, 183, 210, 267, 462, 623
MspI CCGG 5 cut(s) 21, 351, 406, 573, 585
MspR9I CCNGG 2 cut(s) 83, 407
Mva1269I GAATGC 1 cut(s) 620
MvaI CCWGG 1 cut(s) 83
MvnI CGCG 1 cut(s) 35
MwoI GCNNNNNNNGC 3 cut(s) 21, 113, 211
NarI GGCGCC 1 cut(s) 27
NciI CCSGG 1 cut(s) 407
NcoI CCATGG 1 cut(s) 159
NdeII GATC 3 cut(s) 163, 329, 347
NlaIII CATG 1 cut(s) 163
NlaIV GGNNCC 5 cut(s) 28, 129, 231, 349, 553
NmeAIII GCCGAG 1 cut(s) 181
NsbI TGCGCA 1 cut(s) 152
PaqCI CACCTGC 1 cut(s) 356
PcsI WCGNNNNNNNCGW 2 cut(s) 555, 573
PctI GAATGC 1 cut(s) 620
PfeI GAWTC 2 cut(s) 292, 371
PflMI CCANNNNNTGG 1 cut(s) 144
PkrI GCNGC 5 cut(s) 14, 26, 106, 109, 438
PleI GAGTC 1 cut(s) 563
PluTI GGCGCC 1 cut(s) 30
PpsI GAGTC 1 cut(s) 563
Psp124BI GAGCTC 1 cut(s) 420
Psp6I CCWGG 1 cut(s) 81
PspGI CCWGG 1 cut(s) 81
PspN4I GGNNCC 5 cut(s) 28, 129, 231, 349, 553
PspPI GGNCC 3 cut(s) 79, 128, 258
PsuI RGATCY 2 cut(s) 329, 347
SacI GAGCTC 1 cut(s) 420
SalI GTCGAC 1 cut(s) 37
SatI GCNGC 5 cut(s) 13, 25, 105, 108, 437
Sau3AI GATC 3 cut(s) 163, 329, 347
Sau96I GGNCC 3 cut(s) 79, 128, 258
SchI GAGTC 1 cut(s) 563
ScrFI CCNGG 2 cut(s) 83, 407
SduI GDGCHC 3 cut(s) 232, 287, 420
SfcI CTRYAG 1 cut(s) 622
SfoI GGCGCC 1 cut(s) 28
SinI GGWCC 2 cut(s) 79, 258
SsiI CCGC 9 cut(s) 24, 33, 104, 107, 238, 436, 439, 453, 555
SspDI GGCGCC 1 cut(s) 26
SspMI CTAG 3 cut(s) 176, 234, 339
SstI GAGCTC 1 cut(s) 420
StyD4I CCNGG 2 cut(s) 81, 405
StyI CCWWGG 3 cut(s) 159, 233, 639
TaaI ACNGT 3 cut(s) 43, 289, 482
TaiI ACGT 1 cut(s) 582
TaqI TCGA 3 cut(s) 38, 309, 567
TauI GCSGC 4 cut(s) 27, 107, 110, 439
TfiI GAWTC 2 cut(s) 292, 371
TscAI CASTG 1 cut(s) 381
TseI GCWGC 1 cut(s) 12
TspDTI ATGAA 1 cut(s) 256
TspRI CASTG 1 cut(s) 381
Van91I CCANNNNNTGG 1 cut(s) 144
VpaK11BI GGWCC 2 cut(s) 79, 258
XcmI CCANNNNNNNNNTGG 1 cut(s) 166
XmaJI CCTAGG 1 cut(s) 233
XmiI GTMKAC 1 cut(s) 38
XspI CTAG 3 cut(s) 176, 234, 339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.