FvH4_1g04271

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000095
Physical Location & Seq
Forward (+)
2275901 .. 2278493
2593 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g04271.t1

Sequence Viewer

Length: 1758 bp
ATGTTTAGAGCTGTAAAAGAAATAGGAATGCAATGGCTGAAGCGATATGCAAACCAAAATTTGAATTGTAGTCTTGTAGACTTGATTATAGGCTTTTTATTTGATGTGGATTACCATATTCATCGTAAATTTGTAATTAAGGAGGATGTAAACGCCTTAAATGTTAGAATTCCTACAAAACACTTAGTTCAAGCCGATCTATATTGCATATGCATCAGAAACATATCTCTGCGAGATCTTCTTCAGAATAATAAGAGAGAAAATTCCAATATCAATCCAAATCAAATCGCAGAGTTATTTATCCCCAACATCTCAATCAGCCAAGACATGGACGATAGTAATTTGGGAAAGAGAAGGGAAAGTGAGGGCAAACATAACTGCTTGGTTGACAGAATCAGTTATTTGCCCTACGAAATTCTTGTAAGTATTGTGTCTCTTTTGTCACTAAAGGAAGCAGCAGCTACTAGTGTTCTTTCTAGGCGATGGGAGAATCTGTGGAAGGATACGAAGACTCTCAACTTTCAAGATGTAGACTTCTCTGTTGGTGATAATTTTCACTGCTACATGGCCCTAGAACAAGAACTAAGAGATCAGAAAAGCCGTGAATATGTCAATTGGGTGGATCGTGTGTTGGAACAGCATGAAGGTCACAACATTGAACGATTCAGGGCTTACTTCTTTCTACATAGCATGTTTAAGAATTCCATTGATAAGTGGATTGAGTTTGCAATGGAAAAGAGAGTTCAAGTACTTGAGTTGCAGTTTCTTATACCACAATATGATTATGCCAGAGATAACTATGCATTTTCCCAAAACTTATTAGGTCTCGAGGGAGAAGGTGAATCTTTGAAGGACAGGTATTTTGACATCCTTCCAACTCTACAATCATGCCAATACAACATTGGTTTCAAATTCCTCAAAGTTGTTCGCTTCCAACATATTGGCATCACTGATGAAGTTCTTGACTACTTCTTGTCTAACTGTCCAGTTCTTGAGAGATTAACTGTGACAGATGCAAGAGGTTTGGTTTGTATAAGAGTTGCTGGTGCGTCAATATCATTGAAGTATTTGACAGTAATTAATTGTCCTAACCTCAAAAGGATTGAGATTTGCAACGCAAATATTGTTTCATTTGTCTATTGGGGAGTTTGGATAGAGCTGCTTATTAGTAACGTGCCCTTGCTTGTTGATGTCCATCTATCTGTGAGAGCTCTTGATAATGTTGATTTCACAACACTTGCCTTCACCAGACTTTCATGTTGTGTTTCGCAGTTGGAGATTCTGAAGCTGAATATTCAGGGAGTGGTCTACAACCCGAATTATGACTTCCCCGTATTAGAAAGTCTGAAGCGATTGGAATTAAATGTTGAGACAGATTACCATTCAGCTCTTTATCATCTGTCTTCTTTCATGAAGGCTTGTCCTCACATACAGAGACTTGTACTGAAGTTGGACTTCCGAAGAACATACGTCGAAACAACAGTAAGCAAAGCTCCCAAATTCCCTCATCATAGTCTCAAGGTAGTAGAAATTATGGGTTATCGTGGCTATCAATGTGCTGTTGAACATGTCTTGTACTTGATAGTGAATGCTGTTGCACTAGAGAAGATTATTATTGATCCTGTTCGGCGTTGGAATTGGCCCCCAGGAATGGACAGGGGAACTAAAATGGTGAGAGAGGAAGTGAAGGCAAGAAAGCATGCTATGGAGCACCTTAAACAAAAAGTTCCGTCTACTATAGAATTTGTATGCTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

586

Amino Acids

68.25

Weight (kDa)

7.55

Isoelectric Point (pI)

44.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 132 - 169 1.8e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 210 - 582 7.1e-37 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 237 - 480 6.7e-11 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 328
AccI GTMKAC 4 cut(s) 78, 531, 1308, 1733
AclWI GGATC 2 cut(s) 630, 1613
AcsI RAATTY 9 cut(s) 58, 128, 168, 262, 414, 700, 911, 1499, 1742
AcuI CTGAAG 5 cut(s) 59, 227, 1304, 1367, 1466
AfaI GTAC 3 cut(s) 750, 1443, 1577
AfiI CCNNNNNNNGG 2 cut(s) 328, 1651
AflIII ACRYGT 1 cut(s) 1567
AgsI TTSAA 9 cut(s) 64, 191, 524, 659, 746, 850, 910, 1063, 1565
AhlI ACTAGT 1 cut(s) 464
AjnI CCWGG 1 cut(s) 1645
AluBI AGCT 7 cut(s) 11, 461, 1159, 1211, 1288, 1388, 1493
AluI AGCT 7 cut(s) 11, 461, 1159, 1211, 1288, 1388, 1493
Alw21I GWGCWC 2 cut(s) 1213, 1713
Alw26I GTCTC 5 cut(s) 438, 830, 1364, 1429, 1520
AlwI GGATC 2 cut(s) 630, 1613
Ama87I CYCGRG 1 cut(s) 827
AoxI GGCC 2 cut(s) 567, 1640
ApeKI GCWGC 3 cut(s) 455, 458, 1159
ApoI RAATTY 9 cut(s) 58, 128, 168, 262, 414, 700, 911, 1499, 1742
ArsI GACNNNNNNTTYG 2 cut(s) 845, 877
AseI ATTAAT 1 cut(s) 1080
AspS9I GGNCC 2 cut(s) 568, 1641
AsuHPI GGTGA 4 cut(s) 557, 851, 1237, 1684
AvaI CYCGRG 1 cut(s) 827
BaeGI GKGCMC 1 cut(s) 1179
BanII GRGCYC 1 cut(s) 1213
BbsI GAAGAC 2 cut(s) 515, 1395
Bbv12I GWGCWC 2 cut(s) 1213, 1713
BbvI GCAGC 3 cut(s) 467, 470, 1146
BccI CCATC 2 cut(s) 477, 1203
BceAI ACGGC 1 cut(s) 585
BciT130I CCWGG 1 cut(s) 1647
BciVI GTATCC 1 cut(s) 496
BcoDI GTCTC 5 cut(s) 438, 830, 1364, 1429, 1520
BcuI ACTAGT 1 cut(s) 464
BfaI CTAG 4 cut(s) 465, 477, 572, 1601
BfmI CTRYAG 1 cut(s) 1737
BfuI GTATCC 1 cut(s) 496
BglII AGATCT 1 cut(s) 235
BisI GCNGC 3 cut(s) 456, 459, 1160
BlsI GCNGC 3 cut(s) 457, 460, 1161
BmcAI AGTACT 1 cut(s) 750
Bme1390I CCNGG 1 cut(s) 1647
BmeT110I CYCGRG 1 cut(s) 827
BmgT120I GGNCC 2 cut(s) 568, 1641
BmiI GGNNCC 1 cut(s) 1643
BmrFI CCNGG 1 cut(s) 1647
BmsI GCATC 3 cut(s) 222, 954, 1003
BpiI GAAGAC 2 cut(s) 515, 1395
BpuEI CTTGAG 3 cut(s) 773, 1013, 1502
BsaBI GATNNNNATC 1 cut(s) 1194
BsaI GGTCTC 1 cut(s) 830
BsaJI CCNNGG 1 cut(s) 1645
BsaXI ACNNNNNCTCC 2 cut(s) 479, 509
Bsc4I CCNNNNNNNGG 2 cut(s) 328, 1651
Bse1I ACTGG 1 cut(s) 986
Bse3DI GCAATG 2 cut(s) 38, 735
Bse8I GATNNNNATC 1 cut(s) 1194
BseBI CCWGG 1 cut(s) 1647
BseDI CCNNGG 1 cut(s) 1645
BseGI GGATG 2 cut(s) 151, 867
BseJI GATNNNNATC 1 cut(s) 1194
BseLI CCNNNNNNNGG 2 cut(s) 328, 1651
BseMI GCAATG 2 cut(s) 38, 735
BseNI ACTGG 1 cut(s) 986
BseSI GKGCMC 1 cut(s) 1179
BseXI GCAGC 3 cut(s) 467, 470, 1146
BshFI GGCC 2 cut(s) 569, 1642
BsiHKAI GWGCWC 2 cut(s) 1213, 1713
BsiHKCI CYCGRG 1 cut(s) 827
BslI CCNNNNNNNGG 2 cut(s) 328, 1651
BsmAI GTCTC 5 cut(s) 438, 830, 1364, 1429, 1520
BsmI GAATGC 2 cut(s) 33, 1594
BsnI GGCC 2 cut(s) 569, 1642
Bso31I GGTCTC 1 cut(s) 830
BsoBI CYCGRG 1 cut(s) 827
Bsp1286I GDGCHC 3 cut(s) 1179, 1213, 1713
Bsp143I GATC 5 cut(s) 196, 235, 589, 622, 1618
BspANI GGCC 2 cut(s) 569, 1642
BspHI TCATGA 1 cut(s) 1410
BspLI GGNNCC 1 cut(s) 1643
BspPI GGATC 2 cut(s) 630, 1613
BspTNI GGTCTC 1 cut(s) 830
BsrDI GCAATG 2 cut(s) 38, 735
BsrI ACTGG 1 cut(s) 986
BssECI CCNNGG 1 cut(s) 1645
BssMI GATC 5 cut(s) 196, 235, 589, 622, 1618
Bst2UI CCWGG 1 cut(s) 1647
Bst4CI ACNGT 4 cut(s) 983, 1006, 1075, 1483
BstC8I GCNNGC 1 cut(s) 1701
BstDEI CTNAG 2 cut(s) 184, 584
BstF5I GGATG 2 cut(s) 151, 867
BstKTI GATC 5 cut(s) 199, 238, 592, 625, 1621
BstMAI GTCTC 5 cut(s) 438, 830, 1364, 1429, 1520
BstMBI GATC 5 cut(s) 196, 235, 589, 622, 1618
BstNI CCWGG 1 cut(s) 1647
BstNSI RCATGY 3 cut(s) 694, 1571, 1703
BstSCI CCNGG 1 cut(s) 1645
BstSFI CTRYAG 1 cut(s) 1737
BstSLI GKGCMC 1 cut(s) 1179
BstV1I GCAGC 3 cut(s) 467, 470, 1146
BstV2I GAAGAC 2 cut(s) 515, 1395
BstX2I RGATCY 1 cut(s) 235
BstXI CCANNNNNNTGG 1 cut(s) 941
BstYI RGATCY 1 cut(s) 235
BsuI GTATCC 1 cut(s) 496
BsuRI GGCC 2 cut(s) 569, 1642
BtgZI GCGATG 1 cut(s) 496
BtsCI GGATG 2 cut(s) 151, 867
BtsI GCAGTG 1 cut(s) 556
BtsIMutI CAGTG 2 cut(s) 556, 948
Cac8I GCNNGC 1 cut(s) 1701
CciI TCATGA 1 cut(s) 1410
Cfr13I GGNCC 2 cut(s) 568, 1641
CseI GACGC 1 cut(s) 1038
Csp6I GTAC 3 cut(s) 749, 1442, 1576
CviAII CATG 9 cut(s) 328, 565, 641, 691, 888, 1257, 1411, 1568, 1700
CviQI GTAC 3 cut(s) 749, 1442, 1576
DdeI CTNAG 2 cut(s) 184, 584
DpnI GATC 5 cut(s) 198, 237, 591, 624, 1620
DpnII GATC 5 cut(s) 196, 235, 589, 622, 1618
Ecl136II GAGCTC 1 cut(s) 1211
Eco24I GRGCYC 1 cut(s) 1213
Eco31I GGTCTC 1 cut(s) 830
Eco53kI GAGCTC 1 cut(s) 1211
Eco57I CTGAAG 5 cut(s) 59, 227, 1304, 1367, 1466
Eco88I CYCGRG 1 cut(s) 827
EcoICRI GAGCTC 1 cut(s) 1211
EcoRI GAATTC 2 cut(s) 168, 700
EcoRII CCWGG 1 cut(s) 1645
EcoT22I ATGCAT 2 cut(s) 215, 805
EcoT38I GRGCYC 1 cut(s) 1213
FaeI CATG 9 cut(s) 331, 568, 644, 694, 891, 1260, 1414, 1571, 1703
FalI AAGNNNNNCTT 2 cut(s) 1439, 1471
FatI CATG 9 cut(s) 327, 564, 640, 690, 887, 1256, 1410, 1567, 1699
FauNDI CATATG 1 cut(s) 209
FblI GTMKAC 4 cut(s) 78, 531, 1308, 1733
Fnu4HI GCNGC 3 cut(s) 456, 459, 1160
FokI GGATG 2 cut(s) 158, 854
FriOI GRGCYC 1 cut(s) 1213
Fsp4HI GCNGC 3 cut(s) 456, 459, 1160
FspBI CTAG 4 cut(s) 465, 477, 572, 1601
GluI GCNGC 3 cut(s) 456, 459, 1160
HaeIII GGCC 2 cut(s) 569, 1642
HgaI GACGC 1 cut(s) 1038
Hin1II CATG 9 cut(s) 331, 568, 644, 694, 891, 1260, 1414, 1571, 1703
HincII GTYRAC 1 cut(s) 388
HindII GTYRAC 1 cut(s) 388
HinfI GANTC 6 cut(s) 393, 490, 511, 663, 842, 1279
HphI GGTGA 4 cut(s) 557, 851, 1237, 1684
Hpy166II GTNNAC 6 cut(s) 79, 151, 388, 532, 1309, 1734
Hpy188I TCNGA 6 cut(s) 218, 246, 594, 1284, 1347, 1460
Hpy188III TCNNGA 6 cut(s) 524, 827, 962, 992, 1214, 1411
Hpy8I GTNNAC 6 cut(s) 79, 151, 388, 532, 1309, 1734
Hpy99I CGWCG 1 cut(s) 1475
HpyAV CCTTC 9 cut(s) 348, 493, 638, 830, 844, 881, 1252, 1408, 1681
HpyCH4III ACNGT 4 cut(s) 983, 1006, 1075, 1483
HpyCH4IV ACGT 2 cut(s) 1173, 1470
HpyF3I CTNAG 2 cut(s) 184, 584
HpySE526I ACGT 2 cut(s) 1173, 1470
Hsp92II CATG 9 cut(s) 331, 568, 644, 694, 891, 1260, 1414, 1571, 1703
Kzo9I GATC 5 cut(s) 196, 235, 589, 622, 1618
LmnI GCTCC 2 cut(s) 1498, 1708
Lsp1109I GCAGC 3 cut(s) 467, 470, 1146
LweI GCATC 3 cut(s) 222, 954, 1003
MaeI CTAG 4 cut(s) 465, 477, 572, 1601
MaeII ACGT 2 cut(s) 1173, 1470
MaeIII GTNAC 4 cut(s) 441, 647, 1006, 1169
MalI GATC 5 cut(s) 198, 237, 591, 624, 1620
MboI GATC 5 cut(s) 196, 235, 589, 622, 1618
MboII GAAGA 6 cut(s) 230, 233, 520, 1395, 1473, 1618
MfeI CAATTG 1 cut(s) 613
MflI RGATCY 1 cut(s) 235
MhlI GDGCHC 3 cut(s) 1179, 1213, 1713
MlyI GAGTC 1 cut(s) 505
MmeI TCCRAC 6 cut(s) 612, 899, 958, 1254, 1431, 1613
MnlI CCTC 9 cut(s) 136, 358, 823, 926, 1013, 1103, 1434, 1515, 1672
Mph1103I ATGCAT 2 cut(s) 215, 805
MseI TTAA 7 cut(s) 138, 158, 696, 1001, 1080, 1361, 1716
MspR9I CCNGG 1 cut(s) 1647
MunI CAATTG 1 cut(s) 613
Mva1269I GAATGC 2 cut(s) 33, 1594
MvaI CCWGG 1 cut(s) 1647
NdeI CATATG 1 cut(s) 209
NdeII GATC 5 cut(s) 196, 235, 589, 622, 1618
NlaIII CATG 9 cut(s) 331, 568, 644, 694, 891, 1260, 1414, 1571, 1703
NlaIV GGNNCC 1 cut(s) 1643
NmuCI GTSAC 3 cut(s) 441, 647, 1006
NsiI ATGCAT 2 cut(s) 215, 805
NspI RCATGY 3 cut(s) 694, 1571, 1703
PaeI GCATGC 1 cut(s) 1703
PaeR7I CTCGAG 1 cut(s) 827
PagI TCATGA 1 cut(s) 1410
PciI ACATGT 1 cut(s) 1567
PctI GAATGC 2 cut(s) 33, 1594
PfeI GAWTC 5 cut(s) 393, 490, 663, 842, 1279
PflMI CCANNNNNTGG 1 cut(s) 328
PkrI GCNGC 3 cut(s) 457, 460, 1161
PleI GAGTC 1 cut(s) 505
PpsI GAGTC 1 cut(s) 505
PscI ACATGT 1 cut(s) 1567
PshBI ATTAAT 1 cut(s) 1080
Psp124BI GAGCTC 1 cut(s) 1213
Psp6I CCWGG 1 cut(s) 1645
PspGI CCWGG 1 cut(s) 1645
PspN4I GGNNCC 1 cut(s) 1643
PspPI GGNCC 2 cut(s) 568, 1641
PsuI RGATCY 1 cut(s) 235
RsaI GTAC 3 cut(s) 750, 1443, 1577
RsaNI GTAC 3 cut(s) 749, 1442, 1576
SacI GAGCTC 1 cut(s) 1213
SaqAI TTAA 7 cut(s) 138, 158, 696, 1001, 1080, 1361, 1716
SatI GCNGC 3 cut(s) 456, 459, 1160
Sau3AI GATC 5 cut(s) 196, 235, 589, 622, 1618
Sau96I GGNCC 2 cut(s) 568, 1641
ScaI AGTACT 1 cut(s) 750
SchI GAGTC 1 cut(s) 505
ScrFI CCNGG 1 cut(s) 1647
SduI GDGCHC 3 cut(s) 1179, 1213, 1713
SfaNI GCATC 3 cut(s) 222, 954, 1003
SfcI CTRYAG 1 cut(s) 1737
Sfr274I CTCGAG 1 cut(s) 827
SlaI CTCGAG 1 cut(s) 827
SmlI CTYRAG 4 cut(s) 752, 827, 992, 1517
SmoI CTYRAG 4 cut(s) 752, 827, 992, 1517
SpeI ACTAGT 1 cut(s) 464
SphI GCATGC 1 cut(s) 1703
SspI AATATT 2 cut(s) 1123, 1294
SspMI CTAG 4 cut(s) 465, 477, 572, 1601
SstI GAGCTC 1 cut(s) 1213
StyD4I CCNGG 1 cut(s) 1645
TaaI ACNGT 4 cut(s) 983, 1006, 1075, 1483
TaiI ACGT 2 cut(s) 1176, 1473
TaqI TCGA 2 cut(s) 828, 1473
TatI WGTACW 3 cut(s) 748, 1441, 1575
TfiI GAWTC 5 cut(s) 393, 490, 663, 842, 1279
Tru1I TTAA 7 cut(s) 138, 158, 696, 1001, 1080, 1361, 1716
Tru9I TTAA 7 cut(s) 138, 158, 696, 1001, 1080, 1361, 1716
TscAI CASTG 2 cut(s) 563, 955
TseFI GTSAC 3 cut(s) 441, 647, 1006
TseI GCWGC 3 cut(s) 455, 458, 1159
Tsp45I GTSAC 3 cut(s) 441, 647, 1006
TspDTI ATGAA 7 cut(s) 110, 657, 969, 1119, 1245, 1399, 1427
TspGWI ACGGA 1 cut(s) 1719
TspRI CASTG 2 cut(s) 563, 955
Van91I CCANNNNNTGG 1 cut(s) 328
VspI ATTAAT 1 cut(s) 1080
XapI RAATTY 9 cut(s) 58, 128, 168, 262, 414, 700, 911, 1499, 1742
XceI RCATGY 3 cut(s) 694, 1571, 1703
XcmI CCANNNNNNNNNTGG 1 cut(s) 899
XhoI CTCGAG 1 cut(s) 827
XmiI GTMKAC 4 cut(s) 78, 531, 1308, 1733
XspI CTAG 4 cut(s) 465, 477, 572, 1601
ZrmI AGTACT 1 cut(s) 750
Zsp2I ATGCAT 2 cut(s) 215, 805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.