FvH4_6g05150

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000095
Physical Location & Seq
Forward (+)
2882815 .. 2885882
3068 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g05150.t1

Sequence Viewer

Length: 1578 bp
ATGAAAACATTTCAGATGACAACTCGTGGTAACATGCCTGAAGTGACGAAAGCAACTGGGATGCAAACTGAGTGGTATCTTGCTAAAACCTTGACTGACACTGCAAATGGTGACAGCTTCTTCGACTCGCTCAAATCTGCTGTTGCCGACACAGGTTTATATTTCAAGGACGATGTGCAAAACTTGGTGGTGGTGGACAGGATTAGTGCATTGCCAGATGATCTTATAGTTAGTATAGTGTCTCTGCTGCCTCTAAAGGAAGCAGCAGCTACTAGTGTGCTATCTACTCGATGGCGCCACATCTGGACCTTCGTTACCACTCTTGATTTTCACCATGACATTCTTTTCCAACTGCGTTCATACAAACGAGTAAGAATAGAGTCGGAACTTGATATGTACTTGAATTGGGTGAATAGTGTAATGAAACAACATAGAGGCCCATGTATCAATCTGCTTAGGGTTTATGCCGATATAAATGATCCCAAGTACGAAAGTTCCATTCATACATGGGGTCGATTCGCCTTGGAAAAGAGAGTCCAAAACTTTGATTTGCTCCTTTCTAAAAACAGAGGTTTCCCCAAAAGAGGAGGAAACGAGATTAAGGCAGTCTTTAGTACTTTTCCCCTTTCGCACCAATTTGTAAATGTGGACAGATTAGGGTCTGACTTGTGCTCTAAACCTGATATTCTACACCCTTGTCTATACACTTGTTTTAGTGCATTCAGTTGCTTGAAGTACCTTAGAGTTCTTGAATTCAGGTTTGTTTTAGGACTTACTGGGCAAGTTCTAGAGTGCTTCTTGTCTCACTGTCCACTTCTTGAGCGATTAACAGTAGTTCGCACTTTGGGGTTGGATAGTTTTAAAGTTATCGGCCCGTCAATTGCCTTGAAATACTTGCACATACATAAACATACCGGTCCTGTGAACATTGAGATTTGTGATGTAAAACTTGTTACATTTATTTATGGTGGAGGCGGGATAAACTTGCTGCTTAAGAATGTGCCGCAGCTTGTTGAGGTCTCCATTTCTTCCCGCCGAGTTTCATTTGGACAGTGTGGTTCTCATCATCAGCTAGAGGTTTTCAGACTGAGGGGATTTGTGCTAAACAATGAGAAACATGTACTTCCTACATATGTGAATCTCAAGTATTTGGAACTGGGATTGAAGGAACGTGACAGTTGCTGTCTTCTTCAATTAATGTCTTTCATGGAGGCATCTCCTTATTTGCACAAACTTGTATTGAAGTTGGAAACGACTATCTCTCGATCTTATAGGCGTGAAATGGAGGTTAAGCAAGCTCCCAATTACTCCCATCAATTCCTTAGGGTAGTGGAAGTGACAGATTATCACGGTCGTACCAGTGATTTAGAACTTGTTAGGTACTTGATAGAGAATGCTGTTGAACTAAAAGAGCTTCTTATGCATCCTGTTCGACGGTGGTTTTCTCGTGAGCGGATCAGGTTTAGAATGGGTAACAGAGAGGAGGTGGAGAGGATAGAAAAGGAGGAAAGAAAACAAGCTACTCAGCAGCTTAAAGAACTAGTGCCTTCTAGTTTAGAATTCATATGCAGGCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

526

Amino Acids

60.76

Weight (kDa)

8.98

Isoelectric Point (pI)

41.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 68 - 103 1.1e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 165 - 487 1.6e-23 At1g61320/AtMIF1, LRR domain
FBD PF08387 441 - 472 5.8e-06 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 294
AccBSI CCGCTC 1 cut(s) 1453
AciI CCGC 4 cut(s) 975, 1004, 1033, 1453
AclWI GGATC 2 cut(s) 473, 1463
AcsI RAATTY 2 cut(s) 752, 1559
AcuI CTGAAG 1 cut(s) 60
AcyI GRCGYC 1 cut(s) 295
AfaI GTAC 7 cut(s) 398, 488, 616, 737, 1122, 1357, 1382
AfiI CCNNNNNNNGG 1 cut(s) 584
AflII CTTAAG 1 cut(s) 992
AflIII ACRYGT 1 cut(s) 1117
AgeI ACCGGT 1 cut(s) 914
AgsI TTSAA 9 cut(s) 166, 403, 733, 752, 889, 1165, 1193, 1243, 1403
AhlI ACTAGT 2 cut(s) 272, 1540
AluBI AGCT 8 cut(s) 117, 269, 1009, 1072, 1298, 1414, 1520, 1531
AluI AGCT 8 cut(s) 117, 269, 1009, 1072, 1298, 1414, 1520, 1531
Alw21I GWGCWC 1 cut(s) 674
Alw26I GTCTC 3 cut(s) 246, 807, 1024
AlwI GGATC 2 cut(s) 473, 1463
AlwNI CAGNNNCTG 1 cut(s) 1182
AoxI GGCC 2 cut(s) 436, 871
ApeKI GCWGC 6 cut(s) 247, 263, 266, 988, 1006, 1528
ApoI RAATTY 2 cut(s) 752, 1559
ArsI GACNNNNNNTTYG 2 cut(s) 104, 136
AseI ATTAAT 1 cut(s) 1196
AsiGI ACCGGT 1 cut(s) 914
AspLEI GCGC 1 cut(s) 297
AspS9I GGNCC 4 cut(s) 306, 437, 872, 917
AsuHPI GGTGA 3 cut(s) 122, 323, 421
AvaII GGWCC 2 cut(s) 306, 917
AxyI CCTNAGG 1 cut(s) 1322
BaeI ACNNNNGTAYC 2 cut(s) 1339, 1372
BanI GGYRCC 1 cut(s) 294
BauI CACGAG 2 cut(s) 24, 1446
BbsI GAAGAC 1 cut(s) 1178
Bbv12I GWGCWC 1 cut(s) 674
BbvI GCAGC 6 cut(s) 234, 275, 278, 975, 1018, 1540
BccI CCATC 2 cut(s) 285, 1320
BcgI CGANNNNNNTGC 2 cut(s) 1412, 1446
BcoDI GTCTC 3 cut(s) 246, 807, 1024
BcuI ACTAGT 2 cut(s) 272, 1540
BfaI CTAG 5 cut(s) 273, 788, 1073, 1541, 1551
BfmI CTRYAG 1 cut(s) 1574
BfoI RGCGCY 1 cut(s) 298
BfrI CTTAAG 1 cut(s) 992
BisI GCNGC 7 cut(s) 248, 264, 267, 989, 1004, 1007, 1529
BlsI GCNGC 7 cut(s) 249, 265, 268, 990, 1005, 1008, 1530
BmcAI AGTACT 1 cut(s) 616
Bme18I GGWCC 2 cut(s) 306, 917
BmgT120I GGNCC 4 cut(s) 306, 437, 872, 917
BmiI GGNNCC 1 cut(s) 296
BmrI ACTGGG 3 cut(s) 66, 786, 1166
BmsI GCATC 3 cut(s) 51, 1223, 1432
BmuI ACTGGG 3 cut(s) 66, 786, 1166
BpiI GAAGAC 1 cut(s) 1178
Bpu10I CCTNAGC 1 cut(s) 455
BpuEI CTTGAG 2 cut(s) 839, 1127
BsaHI GRCGYC 1 cut(s) 295
BsaI GGTCTC 1 cut(s) 1024
BsaJI CCNNGG 1 cut(s) 522
BsaWI WCCGGW 1 cut(s) 914
Bsc4I CCNNNNNNNGG 1 cut(s) 584
Bse118I RCCGGY 1 cut(s) 914
Bse1I ACTGG 4 cut(s) 61, 781, 1161, 1359
Bse21I CCTNAGG 1 cut(s) 1322
Bse3DI GCAATG 1 cut(s) 209
BseDI CCNNGG 1 cut(s) 522
BseGI GGATG 2 cut(s) 66, 1423
BseLI CCNNNNNNNGG 1 cut(s) 584
BseMI GCAATG 1 cut(s) 209
BseMII CTCAG 3 cut(s) 60, 1079, 1538
BseNI ACTGG 4 cut(s) 61, 781, 1161, 1359
BseRI GAGGAG 2 cut(s) 600, 1496
BseXI GCAGC 6 cut(s) 234, 275, 278, 975, 1018, 1540
Bsh1285I CGRYCG 1 cut(s) 1354
BshFI GGCC 2 cut(s) 438, 873
BshNI GGYRCC 1 cut(s) 294
BshTI ACCGGT 1 cut(s) 914
BsiEI CGRYCG 1 cut(s) 1354
BsiHKAI GWGCWC 1 cut(s) 674
BsiSI CCGG 1 cut(s) 915
BslI CCNNNNNNNGG 1 cut(s) 584
BsmAI GTCTC 3 cut(s) 246, 807, 1024
BsmI GAATGC 2 cut(s) 719, 1399
BsnI GGCC 2 cut(s) 438, 873
Bso31I GGTCTC 1 cut(s) 1024
Bsp1286I GDGCHC 1 cut(s) 674
Bsp143I GATC 4 cut(s) 220, 478, 1265, 1455
BspACI CCGC 4 cut(s) 975, 1004, 1033, 1453
BspANI GGCC 2 cut(s) 438, 873
BspCNI CTCAG 3 cut(s) 61, 1080, 1537
BspLI GGNNCC 1 cut(s) 296
BspPI GGATC 2 cut(s) 473, 1463
BspT107I GGYRCC 1 cut(s) 294
BspTI CTTAAG 1 cut(s) 992
BspTNI GGTCTC 1 cut(s) 1024
BsrBI CCGCTC 1 cut(s) 1453
BsrDI GCAATG 1 cut(s) 209
BsrFI RCCGGY 1 cut(s) 914
BsrI ACTGG 4 cut(s) 61, 781, 1161, 1359
BssAI RCCGGY 1 cut(s) 914
BssECI CCNNGG 1 cut(s) 522
BssMI GATC 4 cut(s) 220, 478, 1265, 1455
BssNI GRCGYC 1 cut(s) 295
BssSI CACGAG 2 cut(s) 24, 1446
BssT1I CCWWGG 1 cut(s) 522
Bst2BI CACGAG 2 cut(s) 24, 1446
Bst4CI ACNGT 6 cut(s) 809, 832, 1053, 1178, 1352, 1437
BstACI GRCGYC 1 cut(s) 295
BstAFI CTTAAG 1 cut(s) 992
BstC8I GCNNGC 2 cut(s) 1296, 1571
BstDEI CTNAG 6 cut(s) 69, 455, 740, 1088, 1322, 1524
BstF5I GGATG 2 cut(s) 66, 1423
BstH2I RGCGCY 1 cut(s) 298
BstHHI GCGC 1 cut(s) 297
BstKTI GATC 4 cut(s) 223, 481, 1268, 1458
BstMAI GTCTC 3 cut(s) 246, 807, 1024
BstMBI GATC 4 cut(s) 220, 478, 1265, 1455
BstMCI CGRYCG 1 cut(s) 1354
BstMWI GCNNNNNNNGC 1 cut(s) 1420
BstNSI RCATGY 2 cut(s) 37, 1121
BstSFI CTRYAG 1 cut(s) 1574
BstV1I GCAGC 6 cut(s) 234, 275, 278, 975, 1018, 1540
BstV2I GAAGAC 1 cut(s) 1178
Bsu36I CCTNAGG 1 cut(s) 1322
BsuRI GGCC 2 cut(s) 438, 873
BtsCI GGATG 2 cut(s) 66, 1423
BtsI GCAGTG 1 cut(s) 99
BtsIMutI CAGTG 4 cut(s) 99, 805, 1058, 1366
Cac8I GCNNGC 2 cut(s) 1296, 1571
CaiI CAGNNNCTG 1 cut(s) 1182
CfoI GCGC 1 cut(s) 297
Cfr10I RCCGGY 1 cut(s) 914
Cfr13I GGNCC 4 cut(s) 306, 437, 872, 917
Csp6I GTAC 7 cut(s) 397, 487, 615, 736, 1121, 1356, 1381
CspAI ACCGGT 1 cut(s) 914
CspCI CAANNNNNGTGG 2 cut(s) 53, 88
CviAII CATG 6 cut(s) 34, 335, 441, 507, 1118, 1207
CviQI GTAC 7 cut(s) 397, 487, 615, 736, 1121, 1356, 1381
DdeI CTNAG 6 cut(s) 69, 455, 740, 1088, 1322, 1524
DinI GGCGCC 1 cut(s) 296
DpnI GATC 4 cut(s) 222, 480, 1267, 1457
DpnII GATC 4 cut(s) 220, 478, 1265, 1455
DraI TTTAAA 1 cut(s) 862
Eco130I CCWWGG 1 cut(s) 522
Eco31I GGTCTC 1 cut(s) 1024
Eco47I GGWCC 2 cut(s) 306, 917
Eco57I CTGAAG 1 cut(s) 60
Eco81I CCTNAGG 1 cut(s) 1322
EcoRI GAATTC 2 cut(s) 752, 1559
EcoT14I CCWWGG 1 cut(s) 522
EcoT22I ATGCAT 1 cut(s) 1425
EgeI GGCGCC 1 cut(s) 296
EheI GGCGCC 1 cut(s) 296
ErhI CCWWGG 1 cut(s) 522
FaeI CATG 6 cut(s) 37, 338, 444, 510, 1121, 1210
FalI AAGNNNNNCTT 4 cut(s) 593, 625, 1401, 1433
FatI CATG 6 cut(s) 33, 334, 440, 506, 1117, 1206
FauI CCCGC 2 cut(s) 968, 1040
FauNDI CATATG 2 cut(s) 1132, 1565
Fnu4HI GCNGC 7 cut(s) 248, 264, 267, 989, 1004, 1007, 1529
FokI GGATG 2 cut(s) 73, 1410
Fsp4HI GCNGC 7 cut(s) 248, 264, 267, 989, 1004, 1007, 1529
FspBI CTAG 5 cut(s) 273, 788, 1073, 1541, 1551
GlaI GCGC 1 cut(s) 296
GluI GCNGC 7 cut(s) 248, 264, 267, 989, 1004, 1007, 1529
HaeII RGCGCY 1 cut(s) 298
HaeIII GGCC 2 cut(s) 438, 873
HapII CCGG 1 cut(s) 915
HhaI GCGC 1 cut(s) 297
Hin1I GRCGYC 1 cut(s) 295
Hin1II CATG 6 cut(s) 37, 338, 444, 510, 1121, 1210
Hin6I GCGC 1 cut(s) 295
HinP1I GCGC 1 cut(s) 295
HinfI GANTC 5 cut(s) 125, 380, 516, 534, 1138
HpaII CCGG 1 cut(s) 915
HphI GGTGA 3 cut(s) 122, 323, 421
Hpy166II GTNNAC 4 cut(s) 196, 649, 812, 925
Hpy188I TCNGA 4 cut(s) 15, 385, 664, 1085
Hpy188III TCNNGA 7 cut(s) 304, 323, 749, 788, 818, 1263, 1448
Hpy8I GTNNAC 4 cut(s) 196, 649, 812, 925
Hpy99I CGWCG 1 cut(s) 1437
HpyAV CCTTC 3 cut(s) 319, 1159, 1557
HpyCH4III ACNGT 6 cut(s) 809, 832, 1053, 1178, 1352, 1437
HpyCH4IV ACGT 1 cut(s) 1171
HpyCH4V TGCA 9 cut(s) 64, 104, 178, 209, 719, 898, 1228, 1423, 1569
HpyF10VI GCNNNNNNNGC 1 cut(s) 1420
HpyF3I CTNAG 6 cut(s) 69, 455, 740, 1088, 1322, 1524
HpySE526I ACGT 1 cut(s) 1171
Hsp92I GRCGYC 1 cut(s) 295
Hsp92II CATG 6 cut(s) 37, 338, 444, 510, 1121, 1210
HspAI GCGC 1 cut(s) 295
KasI GGCGCC 1 cut(s) 294
Kzo9I GATC 4 cut(s) 220, 478, 1265, 1455
LmnI GCTCC 2 cut(s) 558, 1303
Lsp1109I GCAGC 6 cut(s) 234, 275, 278, 975, 1018, 1540
LweI GCATC 3 cut(s) 51, 1223, 1432
MaeI CTAG 5 cut(s) 273, 788, 1073, 1541, 1551
MaeII ACGT 1 cut(s) 1171
MaeIII GTNAC 8 cut(s) 29, 43, 110, 313, 952, 1172, 1336, 1472
MalI GATC 4 cut(s) 222, 480, 1267, 1457
MbiI CCGCTC 1 cut(s) 1453
MboI GATC 4 cut(s) 220, 478, 1265, 1455
MboII GAAGA 4 cut(s) 112, 1020, 1178, 1181
MfeI CAATTG 1 cut(s) 879
MhlI GDGCHC 1 cut(s) 674
MluCI AATT 8 cut(s) 403, 635, 752, 879, 1193, 1303, 1316, 1559
Mly113I GGCGCC 1 cut(s) 295
MlyI GAGTC 3 cut(s) 119, 389, 543
MmeI TCCRAC 4 cut(s) 363, 373, 831, 1227
Mph1103I ATGCAT 1 cut(s) 1425
MseI TTAA 7 cut(s) 600, 827, 861, 993, 1196, 1290, 1533
MspCI CTTAAG 1 cut(s) 992
MspI CCGG 1 cut(s) 915
MunI CAATTG 1 cut(s) 879
Mva1269I GAATGC 2 cut(s) 719, 1399
MwoI GCNNNNNNNGC 1 cut(s) 1420
NarI GGCGCC 1 cut(s) 295
NdeI CATATG 2 cut(s) 1132, 1565
NdeII GATC 4 cut(s) 220, 478, 1265, 1455
NlaIII CATG 6 cut(s) 37, 338, 444, 510, 1121, 1210
NlaIV GGNNCC 1 cut(s) 296
NmeAIII GCCGAG 1 cut(s) 1061
NmuCI GTSAC 4 cut(s) 43, 110, 1172, 1336
NsiI ATGCAT 1 cut(s) 1425
NspI RCATGY 2 cut(s) 37, 1121
PciI ACATGT 1 cut(s) 1117
PctI GAATGC 2 cut(s) 719, 1399
PfeI GAWTC 2 cut(s) 516, 1138
PinAI ACCGGT 1 cut(s) 914
PkrI GCNGC 7 cut(s) 249, 265, 268, 990, 1005, 1008, 1530
PleI GAGTC 3 cut(s) 119, 388, 542
PluTI GGCGCC 1 cut(s) 298
PpsI GAGTC 3 cut(s) 119, 388, 542
PscI ACATGT 1 cut(s) 1117
PshBI ATTAAT 1 cut(s) 1196
PspN4I GGNNCC 1 cut(s) 296
PspPI GGNCC 4 cut(s) 306, 437, 872, 917
PstNI CAGNNNCTG 1 cut(s) 1182
RsaI GTAC 7 cut(s) 398, 488, 616, 737, 1122, 1357, 1382
RsaNI GTAC 7 cut(s) 397, 487, 615, 736, 1121, 1356, 1381
SaqAI TTAA 7 cut(s) 600, 827, 861, 993, 1196, 1290, 1533
SatI GCNGC 7 cut(s) 248, 264, 267, 989, 1004, 1007, 1529
Sau3AI GATC 4 cut(s) 220, 478, 1265, 1455
Sau96I GGNCC 4 cut(s) 306, 437, 872, 917
ScaI AGTACT 1 cut(s) 616
SchI GAGTC 3 cut(s) 119, 389, 543
SduI GDGCHC 1 cut(s) 674
SfaNI GCATC 3 cut(s) 51, 1223, 1432
SfcI CTRYAG 1 cut(s) 1574
SfoI GGCGCC 1 cut(s) 296
SinI GGWCC 2 cut(s) 306, 917
SmlI CTYRAG 3 cut(s) 818, 992, 1142
SmoI CTYRAG 3 cut(s) 818, 992, 1142
SpeI ACTAGT 2 cut(s) 272, 1540
Sse9I AATT 8 cut(s) 403, 635, 752, 879, 1193, 1303, 1316, 1559
SsiI CCGC 4 cut(s) 975, 1004, 1033, 1453
SspDI GGCGCC 1 cut(s) 294
SspMI CTAG 5 cut(s) 273, 788, 1073, 1541, 1551
StyI CCWWGG 1 cut(s) 522
TaaI ACNGT 6 cut(s) 809, 832, 1053, 1178, 1352, 1437
TaiI ACGT 1 cut(s) 1174
TaqI TCGA 5 cut(s) 123, 289, 514, 1264, 1432
TasI AATT 8 cut(s) 403, 635, 752, 879, 1193, 1303, 1316, 1559
TatI WGTACW 3 cut(s) 396, 614, 1120
TauI GCSGC 1 cut(s) 1006
TfiI GAWTC 2 cut(s) 516, 1138
Tru1I TTAA 7 cut(s) 600, 827, 861, 993, 1196, 1290, 1533
Tru9I TTAA 7 cut(s) 600, 827, 861, 993, 1196, 1290, 1533
TscAI CASTG 4 cut(s) 106, 812, 1058, 1366
TseFI GTSAC 4 cut(s) 43, 110, 1172, 1336
TseI GCWGC 6 cut(s) 247, 263, 266, 988, 1006, 1528
Tsp45I GTSAC 4 cut(s) 43, 110, 1172, 1336
TspDTI ATGAA 7 cut(s) 17, 348, 437, 491, 1032, 1195, 1552
TspRI CASTG 4 cut(s) 106, 812, 1058, 1366
Vha464I CTTAAG 1 cut(s) 992
VpaK11BI GGWCC 2 cut(s) 306, 917
VspI ATTAAT 1 cut(s) 1196
XapI RAATTY 2 cut(s) 752, 1559
XbaI TCTAGA 1 cut(s) 787
XceI RCATGY 2 cut(s) 37, 1121
XspI CTAG 5 cut(s) 273, 788, 1073, 1541, 1551
ZrmI AGTACT 1 cut(s) 616
Zsp2I ATGCAT 1 cut(s) 1425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.