FvH4_6g01850

diphthine-ammonia ligase activity

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
1025088 .. 1027413
2326 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g01850.t3

Sequence Viewer

Length: 1395 bp
ATGAAGAGAAGAAGAGCAACCCTTCAATCTGTGGTCCAGGTTGAGAACAAGGGTAAGAGGAGAAGGAAAAGTAGGGACGAATACGATAAGTTGGACAGGATCAGTGCATTGCCTGATGACGTTCTTGTTTATTTAGTGTCCCGTTTGCCGCTAAAGGAAGCAGTAGCTACCAGCGTCCTTTCTAGGCGATGGCAGAATGTGGGACTGTCTACTAAGACCCTTAGGTTTGATGCTGATGACTTATCAATTGACAATAATTTCCAGAGCTACTGGCGCCAAACAAAGGAATATATAGAGCAGGGAAGATGGAAATACATCAATTGGGTGAATCATATGCTGCAACAGCATAGAGGCAAACATGTAGAAGAATTCAGTGTTAGCTTCTGCTTAGATAGTCGCTTTTCAAGTCTGATTAATGGATGGATTCAATTTGCAATGGAAAACAGTGTTGAAAAGCTTGAATTGGACTTTCAACCAGAAGTTTCTATTGGTTATAAGTTTCCAAGTATGGGCTCTTGTTTATACAATATTGGTTTCAAGTCCCTCAAAGTTCTTCAGATTCGACATGTTGGTGTTACTGGAGAAGTTCTCGAGTATTTGTTGTCCAGCTGTCCATTACTCGAGAGATTATCAGTGAGTTGCACAACTGATTTGGTTAATTTAAGAGTTGTTGGTCCATCAATTGCATTGAAGTATCTGGTCATACGATATTGTGGTAACCTGAAAAGCATTGAAATCAGAGACGTAAACATCGTCTCATTTATTTATATTGGATATGTTTCCATAAACTTAGTTATCAGTAATTTACCATTGCTATCTGAGGTAAAGATTTCGAAGGAGACATGGCATAAGGATTACTTAAGTGTTTTGTTTACCCAATGCTGTCTTTCCAACATAGAGATTCTGAAGCTGCATATCCACGGAGCGGTCTACACTGATAATCCTGCATTGCCTCTATTCGCAAGTCTGAAGCATTTGGAATTACAAGTAATATCAAATTATTATAGGGCACTTTATCATTTATATAACTTCCTGAAGGCATCTCCTTGCTTGCGGAGACTCGTGTTGCAGTTGCAGCTATATGAAGTGGGTCCATGTTGCCTGGAAATTGGAGAAATTGAGAAAGCACCTGATTGCCCCCATAATCACCTCAAGGTGGTAGAAATAGATGGCTATCGGGCTCATACATCTGCTGTCGAACATGTCATGTATTTAATAAAGAATGTTGTTTCACTGGAGAAACTTGTTATTGATCCTGTGCGGAGATGGAGATTCCCTCATGGAGTGGATAGGCCAGTTACAGAAATCAATGAAGAAGTCAAGGCCAGAGATCATGTTATGGAATACCTTAAACCAAAAATACCTGCAACTGTAGACTTATTTATGTGCCTTTAG

Protein Analysis

465

Amino Acids

53.71

Weight (kDa)

8.75

Isoelectric Point (pI)

51.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 113 - 458 9.5e-36 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 176 - 354 2.2e-08 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 374 - 415 2.9e-06 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 495
Acc36I ACCTGC 1 cut(s) 1372
AccB1I GGYRCC 1 cut(s) 273
AccBSI CCGCTC 1 cut(s) 926
AccI GTMKAC 3 cut(s) 209, 930, 1374
AciI CCGC 4 cut(s) 149, 926, 1054, 1261
AclWI GGATC 2 cut(s) 107, 1247
AcsI RAATTY 1 cut(s) 368
AcuI CTGAAG 4 cut(s) 539, 926, 989, 1055
AcyI GRCGYC 1 cut(s) 274
AfiI CCNNNNNNNGG 4 cut(s) 283, 509, 925, 1156
AflII CTTAAG 1 cut(s) 859
AflIII ACRYGT 3 cut(s) 358, 565, 1201
AgsI TTSAA 9 cut(s) 26, 405, 428, 452, 461, 473, 538, 691, 734
AjnI CCWGG 2 cut(s) 36, 1101
AjuI GAANNNNNNNTTGG 2 cut(s) 471, 503
AluBI AGCT 7 cut(s) 167, 267, 381, 457, 609, 910, 1078
AluI AGCT 7 cut(s) 167, 267, 381, 457, 609, 910, 1078
Alw26I GTCTC 4 cut(s) 735, 760, 833, 1051
AlwI GGATC 2 cut(s) 107, 1247
Ama87I CYCGRG 2 cut(s) 590, 620
AoxI GGCC 2 cut(s) 1292, 1323
ApeKI GCWGC 3 cut(s) 337, 910, 1075
ApoI RAATTY 1 cut(s) 368
AseI ATTAAT 1 cut(s) 414
AspLEI GCGC 1 cut(s) 276
AspS9I GGNCC 3 cut(s) 34, 674, 1091
AsuHPI GGTGA 2 cut(s) 337, 1139
AsuII TTCGAA 1 cut(s) 833
AvaI CYCGRG 2 cut(s) 590, 620
AvaII GGWCC 3 cut(s) 34, 674, 1091
AxyI CCTNAGG 1 cut(s) 221
BaeGI GKGCMC 1 cut(s) 1012
BanI GGYRCC 1 cut(s) 273
BanII GRGCYC 2 cut(s) 515, 1183
BauI CACGAG 1 cut(s) 1061
BbvI GCAGC 3 cut(s) 324, 897, 1087
BccI CCATC 6 cut(s) 183, 300, 414, 685, 1163, 1260
BciT130I CCWGG 2 cut(s) 38, 1103
BcoDI GTCTC 4 cut(s) 735, 760, 833, 1051
BfaI CTAG 1 cut(s) 183
BfmI CTRYAG 1 cut(s) 1371
BfoI RGCGCY 1 cut(s) 277
BfrI CTTAAG 1 cut(s) 859
BfuAI ACCTGC 1 cut(s) 1372
BisI GCNGC 4 cut(s) 149, 338, 911, 1076
BlsI GCNGC 4 cut(s) 150, 339, 912, 1077
Bme1390I CCNGG 2 cut(s) 38, 1103
Bme18I GGWCC 3 cut(s) 34, 674, 1091
BmeT110I CYCGRG 2 cut(s) 590, 620
BmgT120I GGNCC 3 cut(s) 34, 674, 1091
BmiI GGNNCC 2 cut(s) 275, 1092
BmrFI CCNGG 2 cut(s) 38, 1103
BmsI GCATC 2 cut(s) 220, 1049
BplI GAGNNNNNCTC 4 cut(s) 573, 605, 1261, 1293
BpmI CTGGAG 2 cut(s) 600, 1256
Bpu14I TTCGAA 1 cut(s) 833
BpuEI CTTGAG 1 cut(s) 1136
BsaBI GATNNNNATC 1 cut(s) 1173
BsaHI GRCGYC 1 cut(s) 274
BsaJI CCNNGG 1 cut(s) 919
Bsc4I CCNNNNNNNGG 4 cut(s) 283, 509, 925, 1156
Bse1I ACTGG 4 cut(s) 275, 583, 1239, 1295
Bse21I CCTNAGG 1 cut(s) 221
Bse3DI GCAATG 4 cut(s) 107, 441, 809, 947
Bse8I GATNNNNATC 1 cut(s) 1173
BseBI CCWGG 2 cut(s) 38, 1103
BseDI CCNNGG 1 cut(s) 919
BseGI GGATG 1 cut(s) 425
BseJI GATNNNNATC 1 cut(s) 1173
BseLI CCNNNNNNNGG 4 cut(s) 283, 509, 925, 1156
BseMI GCAATG 4 cut(s) 107, 441, 809, 947
BseMII CTCAG 1 cut(s) 810
BseNI ACTGG 4 cut(s) 275, 583, 1239, 1295
BseRI GAGGAG 1 cut(s) 73
BseSI GKGCMC 1 cut(s) 1012
BseXI GCAGC 3 cut(s) 324, 897, 1087
BshFI GGCC 2 cut(s) 1294, 1325
BshNI GGYRCC 1 cut(s) 273
BsiHKCI CYCGRG 2 cut(s) 590, 620
BslFI GGGAC 4 cut(s) 89, 124, 216, 526
BslI CCNNNNNNNGG 4 cut(s) 283, 509, 925, 1156
BsmAI GTCTC 4 cut(s) 735, 760, 833, 1051
BsmBI CGTCTC 2 cut(s) 735, 760
BsmFI GGGAC 4 cut(s) 89, 124, 216, 526
BsnI GGCC 2 cut(s) 1294, 1325
BsoBI CYCGRG 2 cut(s) 590, 620
Bsp119I TTCGAA 1 cut(s) 833
Bsp1286I GDGCHC 3 cut(s) 515, 1012, 1183
Bsp143I GATC 3 cut(s) 99, 1252, 1330
BspACI CCGC 4 cut(s) 149, 926, 1054, 1261
BspANI GGCC 2 cut(s) 1294, 1325
BspCNI CTCAG 1 cut(s) 811
BspLI GGNNCC 2 cut(s) 275, 1092
BspMI ACCTGC 1 cut(s) 1372
BspPI GGATC 2 cut(s) 107, 1247
BspQI GCTCTTC 1 cut(s) 7
BspT104I TTCGAA 1 cut(s) 833
BspT107I GGYRCC 1 cut(s) 273
BspTI CTTAAG 1 cut(s) 859
BsrBI CCGCTC 1 cut(s) 926
BsrDI GCAATG 4 cut(s) 107, 441, 809, 947
BsrI ACTGG 4 cut(s) 275, 583, 1239, 1295
BssECI CCNNGG 1 cut(s) 919
BssMI GATC 3 cut(s) 99, 1252, 1330
BssNI GRCGYC 1 cut(s) 274
BssSI CACGAG 1 cut(s) 1061
Bst2BI CACGAG 1 cut(s) 1061
Bst2UI CCWGG 2 cut(s) 38, 1103
Bst4CI ACNGT 3 cut(s) 207, 446, 1372
Bst6I CTCTTC 1 cut(s) 7
BstACI GRCGYC 1 cut(s) 274
BstAFI CTTAAG 1 cut(s) 859
BstBI TTCGAA 1 cut(s) 833
BstC8I GCNNGC 1 cut(s) 1052
BstDEI CTNAG 5 cut(s) 213, 221, 388, 790, 819
BstDSI CCRYGG 1 cut(s) 919
BstEII GGTNACC 1 cut(s) 716
BstF5I GGATG 1 cut(s) 425
BstH2I RGCGCY 1 cut(s) 277
BstHHI GCGC 1 cut(s) 276
BstKTI GATC 3 cut(s) 102, 1255, 1333
BstMAI GTCTC 4 cut(s) 735, 760, 833, 1051
BstMBI GATC 3 cut(s) 99, 1252, 1330
BstMWI GCNNNNNNNGC 3 cut(s) 273, 343, 1075
BstNI CCWGG 2 cut(s) 38, 1103
BstNSI RCATGY 3 cut(s) 362, 569, 1205
BstPI GGTNACC 1 cut(s) 716
BstSCI CCNGG 2 cut(s) 36, 1101
BstSFI CTRYAG 1 cut(s) 1371
BstSLI GKGCMC 1 cut(s) 1012
BstV1I GCAGC 3 cut(s) 324, 897, 1087
Bsu36I CCTNAGG 1 cut(s) 221
BsuRI GGCC 2 cut(s) 1294, 1325
BtgI CCRYGG 1 cut(s) 919
BtgZI GCGATG 1 cut(s) 202
BtsCI GGATG 1 cut(s) 425
BtsIMutI CAGTG 6 cut(s) 109, 379, 451, 639, 933, 1232
BveI ACCTGC 1 cut(s) 1372
Cac8I GCNNGC 1 cut(s) 1052
CfoI GCGC 1 cut(s) 276
Cfr13I GGNCC 3 cut(s) 34, 674, 1091
CseI GACGC 1 cut(s) 163
CviAII CATG 8 cut(s) 359, 566, 843, 1095, 1202, 1207, 1280, 1334
DdeI CTNAG 5 cut(s) 213, 221, 388, 790, 819
DinI GGCGCC 1 cut(s) 275
DpnI GATC 3 cut(s) 101, 1254, 1332
DpnII GATC 3 cut(s) 99, 1252, 1330
Eam1104I CTCTTC 1 cut(s) 7
EarI CTCTTC 1 cut(s) 7
Eco24I GRGCYC 2 cut(s) 515, 1183
Eco47I GGWCC 3 cut(s) 34, 674, 1091
Eco57I CTGAAG 4 cut(s) 539, 926, 989, 1055
Eco81I CCTNAGG 1 cut(s) 221
Eco88I CYCGRG 2 cut(s) 590, 620
Eco91I GGTNACC 1 cut(s) 716
EcoO65I GGTNACC 1 cut(s) 716
EcoRI GAATTC 1 cut(s) 368
EcoRII CCWGG 2 cut(s) 36, 1101
EcoT38I GRGCYC 2 cut(s) 515, 1183
EgeI GGCGCC 1 cut(s) 275
EheI GGCGCC 1 cut(s) 275
Esp3I CGTCTC 2 cut(s) 735, 760
FaeI CATG 8 cut(s) 362, 569, 846, 1098, 1205, 1210, 1283, 1337
FalI AAGNNNNNCTT 2 cut(s) 842, 874
FaqI GGGAC 4 cut(s) 89, 124, 216, 526
FatI CATG 8 cut(s) 358, 565, 842, 1094, 1201, 1206, 1279, 1333
FauNDI CATATG 1 cut(s) 333
FblI GTMKAC 3 cut(s) 209, 930, 1374
Fnu4HI GCNGC 4 cut(s) 149, 338, 911, 1076
FokI GGATG 1 cut(s) 432
FriOI GRGCYC 2 cut(s) 515, 1183
Fsp4HI GCNGC 4 cut(s) 149, 338, 911, 1076
FspBI CTAG 1 cut(s) 183
GlaI GCGC 1 cut(s) 275
GluI GCNGC 4 cut(s) 149, 338, 911, 1076
GsuI CTGGAG 2 cut(s) 600, 1256
HaeII RGCGCY 1 cut(s) 277
HaeIII GGCC 2 cut(s) 1294, 1325
HgaI GACGC 1 cut(s) 163
HhaI GCGC 1 cut(s) 276
Hin1I GRCGYC 1 cut(s) 274
Hin1II CATG 8 cut(s) 362, 569, 846, 1098, 1205, 1210, 1283, 1337
Hin6I GCGC 1 cut(s) 274
HinP1I GCGC 1 cut(s) 274
HindIII AAGCTT 1 cut(s) 455
HinfI GANTC 6 cut(s) 328, 424, 559, 901, 1059, 1272
HphI GGTGA 2 cut(s) 337, 1139
Hpy166II GTNNAC 5 cut(s) 210, 748, 873, 931, 1375
Hpy188I TCNGA 6 cut(s) 411, 558, 740, 820, 906, 969
Hpy188III TCNNGA 4 cut(s) 262, 590, 622, 1033
Hpy8I GTNNAC 5 cut(s) 210, 748, 873, 931, 1375
HpyAV CCTTC 4 cut(s) 32, 57, 829, 1030
HpyCH4III ACNGT 3 cut(s) 207, 446, 1372
HpyCH4IV ACGT 2 cut(s) 120, 744
HpyF10VI GCNNNNNNNGC 3 cut(s) 273, 343, 1075
HpyF3I CTNAG 5 cut(s) 213, 221, 388, 790, 819
HpySE526I ACGT 2 cut(s) 120, 744
Hsp92I GRCGYC 1 cut(s) 274
Hsp92II CATG 8 cut(s) 362, 569, 846, 1098, 1205, 1210, 1283, 1337
HspAI GCGC 1 cut(s) 274
KasI GGCGCC 1 cut(s) 273
Kzo9I GATC 3 cut(s) 99, 1252, 1330
LguI GCTCTTC 1 cut(s) 7
LmnI GCTCC 1 cut(s) 923
Lsp1109I GCAGC 3 cut(s) 324, 897, 1087
LweI GCATC 2 cut(s) 220, 1049
MaeI CTAG 1 cut(s) 183
MaeII ACGT 2 cut(s) 120, 744
MaeIII GTNAC 3 cut(s) 574, 716, 1297
MalI GATC 3 cut(s) 101, 1254, 1332
MbiI CCGCTC 1 cut(s) 926
MboI GATC 3 cut(s) 99, 1252, 1330
MboII GAAGA 7 cut(s) 16, 21, 24, 315, 377, 545, 1325
MfeI CAATTG 3 cut(s) 246, 319, 681
MhlI GDGCHC 3 cut(s) 515, 1012, 1183
Mly113I GGCGCC 1 cut(s) 274
MlyI GAGTC 1 cut(s) 1053
MmeI TCCRAC 2 cut(s) 72, 915
MnlI CCTC 7 cut(s) 51, 344, 554, 814, 963, 1160, 1287
MseI TTAA 6 cut(s) 414, 657, 662, 860, 1214, 1350
MslI CAYNNNNRTG 1 cut(s) 570
MspA1I CMGCKG 1 cut(s) 609
MspCI CTTAAG 1 cut(s) 859
MspR9I CCNGG 2 cut(s) 38, 1103
MunI CAATTG 3 cut(s) 246, 319, 681
MvaI CCWGG 2 cut(s) 38, 1103
MwoI GCNNNNNNNGC 3 cut(s) 273, 343, 1075
NarI GGCGCC 1 cut(s) 274
NdeI CATATG 1 cut(s) 333
NdeII GATC 3 cut(s) 99, 1252, 1330
NlaIII CATG 8 cut(s) 362, 569, 846, 1098, 1205, 1210, 1283, 1337
NlaIV GGNNCC 2 cut(s) 275, 1092
NspI RCATGY 3 cut(s) 362, 569, 1205
NspV TTCGAA 1 cut(s) 833
PaeR7I CTCGAG 2 cut(s) 590, 620
PciI ACATGT 3 cut(s) 358, 565, 1201
PciSI GCTCTTC 1 cut(s) 7
PcsI WCGNNNNNNNCGW 1 cut(s) 750
PfeI GAWTC 5 cut(s) 328, 424, 559, 901, 1272
PkrI GCNGC 4 cut(s) 150, 339, 912, 1077
PleI GAGTC 1 cut(s) 1053
PluTI GGCGCC 1 cut(s) 277
PpsI GAGTC 1 cut(s) 1053
PscI ACATGT 3 cut(s) 358, 565, 1201
PshBI ATTAAT 1 cut(s) 414
PsiI TTATAA 1 cut(s) 495
Psp6I CCWGG 2 cut(s) 36, 1101
PspEI GGTNACC 1 cut(s) 716
PspGI CCWGG 2 cut(s) 36, 1101
PspN4I GGNNCC 2 cut(s) 275, 1092
PspPI GGNCC 3 cut(s) 34, 674, 1091
PvuII CAGCTG 1 cut(s) 609
RseI CAYNNNNRTG 1 cut(s) 570
SapI GCTCTTC 1 cut(s) 7
SaqAI TTAA 6 cut(s) 414, 657, 662, 860, 1214, 1350
SatI GCNGC 4 cut(s) 149, 338, 911, 1076
Sau3AI GATC 3 cut(s) 99, 1252, 1330
Sau96I GGNCC 3 cut(s) 34, 674, 1091
SchI GAGTC 1 cut(s) 1053
ScrFI CCNGG 2 cut(s) 38, 1103
SduI GDGCHC 3 cut(s) 515, 1012, 1183
SfaNI GCATC 2 cut(s) 220, 1049
SfcI CTRYAG 1 cut(s) 1371
SfoI GGCGCC 1 cut(s) 275
Sfr274I CTCGAG 2 cut(s) 590, 620
SfuI TTCGAA 1 cut(s) 833
SinI GGWCC 3 cut(s) 34, 674, 1091
SlaI CTCGAG 2 cut(s) 590, 620
SmiMI CAYNNNNRTG 1 cut(s) 570
SmlI CTYRAG 4 cut(s) 590, 620, 859, 1151
SmoI CTYRAG 4 cut(s) 590, 620, 859, 1151
SsiI CCGC 4 cut(s) 149, 926, 1054, 1261
SspDI GGCGCC 1 cut(s) 273
SspI AATATT 1 cut(s) 529
SspMI CTAG 1 cut(s) 183
StyD4I CCNGG 2 cut(s) 36, 1101
TaaI ACNGT 3 cut(s) 207, 446, 1372
TaiI ACGT 2 cut(s) 123, 747
TaqI TCGA 5 cut(s) 562, 591, 621, 833, 1197
TauI GCSGC 1 cut(s) 151
TfiI GAWTC 5 cut(s) 328, 424, 559, 901, 1272
Tru1I TTAA 6 cut(s) 414, 657, 662, 860, 1214, 1350
Tru9I TTAA 6 cut(s) 414, 657, 662, 860, 1214, 1350
TscAI CASTG 6 cut(s) 109, 379, 451, 639, 940, 1239
TseI GCWGC 3 cut(s) 337, 910, 1075
TspDTI ATGAA 3 cut(s) 17, 1098, 1326
TspGWI ACGGA 1 cut(s) 936
TspRI CASTG 6 cut(s) 109, 379, 451, 639, 940, 1239
Vha464I CTTAAG 1 cut(s) 859
VpaK11BI GGWCC 3 cut(s) 34, 674, 1091
VspI ATTAAT 1 cut(s) 414
XapI RAATTY 1 cut(s) 368
XceI RCATGY 3 cut(s) 362, 569, 1205
XhoI CTCGAG 2 cut(s) 590, 620
XmiI GTMKAC 3 cut(s) 209, 930, 1374
XspI CTAG 1 cut(s) 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.