Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000430.1

Orthogroup ID

OG0000095

Physical Location & Seq

Genomic Coordinates Forward (+)

629 .. 6552

Gene Structure 5924 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000430.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

atggtggacagggtcagcgcattgtccgatgacattcttgtttttttttttttagaggaaagacgacatactatattaaaagaagcagtagctaccggtgtcctttctaggcgatggcagaatgtgggactgtctactatgacccttaggtttgatgctgttgacttctcaattgacaataatttcgaccactactttcgcctaccaaaagaatttaaagagcaggagagctggaattacatcaattgggtgaatcatgtggtgcaacagcacagaggcgaacatatagaagaattcaggattagcttctgcttagatagtcgcttttcaagttccattaatgaatggattcaatttgcaatggaaaacagtgttgaaatgcttgaattggaattttatccagaagtttttattagatttgaagattatacatttccccacaaacttttggggatctgcactccaagtctgggctcttgtggatacaatattggcttcaagtccctcaaagttcttcagatccgacatgttggtgtgactggagaagttctcgagtatttcctgtccaactgtccattactcgagagattatcagtcacttgcgcaaaaggtttggttaatttaagagttgttggttcatcgatttcgttgaagtatttggtgatacaaaattgtcataacctggaaagcattgaaatcagagacgtaaacatcgtttcatttatttattgtggatatcgttcaacaaatatcagtaacgtaccattgctttctgaggtaaccgtttctaatcggtgttgtccaaaggattttataagggttgtgttgaaccaactttcctgctgtctttccaacatagagattctgaagctgcatctccagctgggagcgggccacaatgagaatcctgtattgcctctatttgcaaatctgaagcatttggaattactagttgtagcaaattattataaggcacttcatcatttaaatagcttcctcaaggcatctccttacttgcagagactcgtattgaagctgtattcggagagagcatgcatgggaatgggagaaattgagaaagcagctgattgcccccataatcacctcaaggtagtagaaatagttggctatcgagctcataaatctggtgttgaacttgtcatgcacttaataaagaatggtcttggactggagaaaattgtgattgatccttggatccaatcgggggttcggaaaaggactactcatagccgtttgcgattgggtcttctgctgttgatgatgatggtgaagtgcaacggtgctaaattgtttaattgggcccgttatgaatctaacttggactgttttgcttctgatggagatggtactgggagatgcaagcttcaccatgattgggagggcggtgattcaaagcggctacacaagggatctgttgatttggctctggatgtccagatcaatatggttggcttcgtatttgggttgtgtgtggacccaaggtcaaacccagttctggaaggacagctgcatatgggccttaacaggcttattgggcctctatttggatttggagcctggatagtctttagacttggtttgttgaggtccagaatgcctagtgggtctcttgatcttgatgggcttcttgagctgctggttgggcttggagaagtgaagatagatttttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006417 GO:0006448 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0010608 GO:0016874 GO:0016879 GO:0016880 GO:0017178 GO:0017182 GO:0017183 GO:0018193 GO:0018202 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032268 GO:0034248 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051246 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:1900247 GO:1901564 GO:2000112 GO:2000765

KEGG Pathways

Metabolic & Signaling

ko00230 map00230

Pfam Domains

Protein Families

Diphthami_syn_2 Ribonuc_L-PSP

Protein Analysis

563

Amino Acids

63.99

Weight (kDa)

7.07

Isoelectric Point (pI)

40.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000095)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica	MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica	Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis	pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis	RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata	RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora	Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii	Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa	Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha	Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana	Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	815, 969
Acc16I	TGCGCA	1 cut(s)	604
AccBSI	CCGCTC	1 cut(s)	890
AccI	GTMKAC	1 cut(s)	134
AciI	CCGC	3 cut(s)	890, 1404, 1417
AclWI	GGATC	6 cut(s)	461, 514, 1202, 1210, 1223, 1438
AcsI	RAATTY	3 cut(s)	212, 293, 392
AcuI	CTGAAG	3 cut(s)	500, 887, 953
AfaI	GTAC	2 cut(s)	762, 1369
AfiI	CCNNNNNNNGG	5 cut(s)	470, 1225, 1396, 1516, 1565
AflIII	ACRYGT	1 cut(s)	526
AgeI	ACCGGT	1 cut(s)	95
AhdI	GACNNNNNGTC	1 cut(s)	1501
AhlI	ACTAGT	1 cut(s)	949
AjnI	CCWGG	2 cut(s)	681, 1577
AjuI	GAANNNNNNNTTGG	2 cut(s)	1212, 1244
AloI	GAACNNNNNNTCC	2 cut(s)	821, 853
Alw21I	GWGCWC	1 cut(s)	1138
Alw26I	GTCTC	3 cut(s)	696, 1015, 1632
AlwI	GGATC	6 cut(s)	461, 514, 1202, 1210, 1223, 1438
Ama87I	CYCGRG	2 cut(s)	551, 581
AoxI	GGCC	4 cut(s)	892, 1320, 1537, 1556
ApaI	GGGCCC	1 cut(s)	1324
ApeKI	GCWGC	4 cut(s)	871, 1082, 1528, 1654
ApoI	RAATTY	3 cut(s)	212, 293, 392
ArsI	GACNNNNNNTTYG	2 cut(s)	167, 199
AseI	ATTAAT	1 cut(s)	339
AsiGI	ACCGGT	1 cut(s)	95
Asp700I	GAANNNNTTC	1 cut(s)	348
AspLEI	GCGC	2 cut(s)	20, 605
AspS9I	GGNCC	7 cut(s)	892, 1320, 1321, 1495, 1537, 1556, 1608
AsuHPI	GGTGA	6 cut(s)	262, 673, 1094, 1300, 1379, 1418
AvaI	CYCGRG	2 cut(s)	551, 581
AvaII	GGWCC	2 cut(s)	1495, 1608
AxyI	CCTNAGG	1 cut(s)	146
BaeGI	GKGCMC	1 cut(s)	1324
BamHI	GGATCC	1 cut(s)	1215
BanII	GRGCYC	3 cut(s)	476, 1138, 1324
BbsI	GAAGAC	1 cut(s)	1259
Bbv12I	GWGCWC	1 cut(s)	1138
BbvI	GCAGC	4 cut(s)	858, 1094, 1515, 1641
BccI	CCATC	5 cut(s)	108, 1279, 1352, 1358, 1634
BceAI	ACGGC	1 cut(s)	1236
BciT130I	CCWGG	2 cut(s)	683, 1579
BciVI	GTATCC	1 cut(s)	476
BcoDI	GTCTC	3 cut(s)	696, 1015, 1632
BcuI	ACTAGT	1 cut(s)	949
BfaI	CTAG	3 cut(s)	108, 950, 1620
BfuI	GTATCC	1 cut(s)	476
BisI	GCNGC	5 cut(s)	872, 1083, 1418, 1529, 1655
BlsI	GCNGC	5 cut(s)	873, 1084, 1419, 1530, 1656
Bme1390I	CCNGG	2 cut(s)	683, 1579
Bme18I	GGWCC	2 cut(s)	1495, 1608
BmeRI	GACNNNNNGTC	1 cut(s)	1501
BmeT110I	CYCGRG	2 cut(s)	551, 581
BmgT120I	GGNCC	7 cut(s)	892, 1320, 1321, 1495, 1537, 1556, 1608
BmiI	GGNNCC	4 cut(s)	1217, 1322, 1497, 1576
BmrFI	CCNGG	2 cut(s)	683, 1579
BmrI	ACTGGG	2 cut(s)	1380, 1505
BmsI	GCATC	4 cut(s)	145, 883, 1013, 1367
BmuI	ACTGGG	2 cut(s)	1380, 1505
BpiI	GAAGAC	1 cut(s)	1259
BplI	GAGNNNNNCTC	2 cut(s)	534, 566
BpmI	CTGGAG	3 cut(s)	561, 863, 1211
BpuEI	CTTGAG	3 cut(s)	983, 1091, 1670
Bsa29I	ATCGAT	1 cut(s)	641
BsaI	GGTCTC	1 cut(s)	1632
BsaJI	CCNNGG	2 cut(s)	1211, 1499
BsaWI	WCCGGW	1 cut(s)	95
Bsc4I	CCNNNNNNNGG	5 cut(s)	470, 1225, 1396, 1516, 1565
Bse118I	RCCGGY	1 cut(s)	95
Bse1I	ACTGG	4 cut(s)	544, 1194, 1375, 1511
Bse21I	CCTNAGG	1 cut(s)	146
Bse3DI	GCAATG	2 cut(s)	366, 764
BseBI	CCWGG	2 cut(s)	683, 1579
BseCI	ATCGAT	1 cut(s)	641
BseDI	CCNNGG	2 cut(s)	1211, 1499
BseGI	GGATG	1 cut(s)	1456
BseLI	CCNNNNNNNGG	5 cut(s)	470, 1225, 1396, 1516, 1565
BseMI	GCAATG	2 cut(s)	366, 764
BseMII	CTCAG	1 cut(s)	765
BseNI	ACTGG	4 cut(s)	544, 1194, 1375, 1511
BseSI	GKGCMC	1 cut(s)	1324
BseXI	GCAGC	4 cut(s)	858, 1094, 1515, 1641
BseYI	CCCAGC	1 cut(s)	883
BsgI	GTGCAG	1 cut(s)	442
BshFI	GGCC	4 cut(s)	894, 1322, 1539, 1558
BshTI	ACCGGT	1 cut(s)	95
BshVI	ATCGAT	1 cut(s)	641
BsiHKAI	GWGCWC	1 cut(s)	1138
BsiHKCI	CYCGRG	2 cut(s)	551, 581
BsiSI	CCGG	1 cut(s)	96
BslFI	GGGAC	2 cut(s)	141, 487
BslI	CCNNNNNNNGG	5 cut(s)	470, 1225, 1396, 1516, 1565
BsmAI	GTCTC	3 cut(s)	696, 1015, 1632
BsmBI	CGTCTC	1 cut(s)	696
BsmFI	GGGAC	2 cut(s)	141, 487
BsmI	GAATGC	1 cut(s)	1620
BsnI	GGCC	4 cut(s)	894, 1322, 1539, 1558
Bso31I	GGTCTC	1 cut(s)	1632
BsoBI	CYCGRG	2 cut(s)	551, 581
Bsp120I	GGGCCC	1 cut(s)	1320
Bsp1286I	GDGCHC	3 cut(s)	476, 1138, 1324
Bsp143I	GATC	7 cut(s)	453, 519, 1207, 1215, 1430, 1458, 1633
BspACI	CCGC	3 cut(s)	890, 1404, 1417
BspANI	GGCC	4 cut(s)	894, 1322, 1539, 1558
BspCNI	CTCAG	1 cut(s)	766
BspDI	ATCGAT	1 cut(s)	641
BspLI	GGNNCC	4 cut(s)	1217, 1322, 1497, 1576
BspPI	GGATC	6 cut(s)	461, 514, 1202, 1210, 1223, 1438
BspTNI	GGTCTC	1 cut(s)	1632
BsrBI	CCGCTC	1 cut(s)	890
BsrDI	GCAATG	2 cut(s)	366, 764
BsrFI	RCCGGY	1 cut(s)	95
BsrI	ACTGG	4 cut(s)	544, 1194, 1375, 1511
BssAI	RCCGGY	1 cut(s)	95
BssECI	CCNNGG	2 cut(s)	1211, 1499
BssMI	GATC	7 cut(s)	453, 519, 1207, 1215, 1430, 1458, 1633
BssT1I	CCWWGG	2 cut(s)	1211, 1499
Bst2UI	CCWGG	2 cut(s)	683, 1579
Bst4CI	ACNGT	6 cut(s)	132, 371, 572, 784, 1301, 1346
BstC8I	GCNNGC	3 cut(s)	892, 1054, 1382
BstDEI	CTNAG	3 cut(s)	146, 313, 774
BstEII	GGTNACC	1 cut(s)	778
BstF5I	GGATG	1 cut(s)	1456
BstHHI	GCGC	2 cut(s)	20, 605
BstKTI	GATC	7 cut(s)	456, 522, 1210, 1218, 1433, 1461, 1636
BstMAI	GTCTC	3 cut(s)	696, 1015, 1632
BstMBI	GATC	7 cut(s)	453, 519, 1207, 1215, 1430, 1458, 1633
BstMWI	GCNNNNNNNGC	4 cut(s)	880, 1555, 1651, 1663
BstNI	CCWGG	2 cut(s)	683, 1579
BstNSI	RCATGY	2 cut(s)	530, 1056
BstPI	GGTNACC	1 cut(s)	778
BstSCI	CCNGG	2 cut(s)	681, 1577
BstSLI	GKGCMC	1 cut(s)	1324
BstV1I	GCAGC	4 cut(s)	858, 1094, 1515, 1641
BstV2I	GAAGAC	1 cut(s)	1259
BstX2I	RGATCY	4 cut(s)	453, 519, 1215, 1430
BstYI	RGATCY	4 cut(s)	453, 519, 1215, 1430
Bsu15I	ATCGAT	1 cut(s)	641
Bsu36I	CCTNAGG	1 cut(s)	146
BsuI	GTATCC	1 cut(s)	476
BsuRI	GGCC	4 cut(s)	894, 1322, 1539, 1558
BsuTUI	ATCGAT	1 cut(s)	641
BtgZI	GCGATG	1 cut(s)	127
BtsCI	GGATG	1 cut(s)	1456
BtsIMutI	CAGTG	1 cut(s)	376
Cac8I	GCNNGC	3 cut(s)	892, 1054, 1382
CfoI	GCGC	2 cut(s)	20, 605
Cfr10I	RCCGGY	1 cut(s)	95
Cfr13I	GGNCC	7 cut(s)	892, 1320, 1321, 1495, 1537, 1556, 1608
ClaI	ATCGAT	1 cut(s)	641
Csp6I	GTAC	2 cut(s)	761, 1368
CspAI	ACCGGT	1 cut(s)	95
CviAII	CATG	6 cut(s)	257, 527, 1053, 1057, 1162, 1391
CviQI	GTAC	2 cut(s)	761, 1368
DdeI	CTNAG	3 cut(s)	146, 313, 774
DpnI	GATC	7 cut(s)	455, 521, 1209, 1217, 1432, 1460, 1635
DpnII	GATC	7 cut(s)	453, 519, 1207, 1215, 1430, 1458, 1633
DraI	TTTAAA	2 cut(s)	217, 987
DriI	GACNNNNNGTC	1 cut(s)	1501
Eam1105I	GACNNNNNGTC	1 cut(s)	1501
Ecl136II	GAGCTC	1 cut(s)	1136
Eco130I	CCWWGG	2 cut(s)	1211, 1499
Eco24I	GRGCYC	3 cut(s)	476, 1138, 1324
Eco31I	GGTCTC	1 cut(s)	1632
Eco32I	GATATC	1 cut(s)	737
Eco47I	GGWCC	2 cut(s)	1495, 1608
Eco53kI	GAGCTC	1 cut(s)	1136
Eco57I	CTGAAG	3 cut(s)	500, 887, 953
Eco81I	CCTNAGG	1 cut(s)	146
Eco88I	CYCGRG	2 cut(s)	551, 581
Eco91I	GGTNACC	1 cut(s)	778
EcoICRI	GAGCTC	1 cut(s)	1136
EcoO65I	GGTNACC	1 cut(s)	778
EcoRI	GAATTC	1 cut(s)	293
EcoRII	CCWGG	2 cut(s)	681, 1577
EcoRV	GATATC	1 cut(s)	737
EcoT14I	CCWWGG	2 cut(s)	1211, 1499
EcoT22I	ATGCAT	1 cut(s)	1058
EcoT38I	GRGCYC	3 cut(s)	476, 1138, 1324
ErhI	CCWWGG	2 cut(s)	1211, 1499
Esp3I	CGTCTC	1 cut(s)	696
FaeI	CATG	6 cut(s)	260, 530, 1056, 1060, 1165, 1394
FaqI	GGGAC	2 cut(s)	141, 487
FatI	CATG	6 cut(s)	256, 526, 1052, 1056, 1161, 1390
FauI	CCCGC	1 cut(s)	883
FauNDI	CATATG	1 cut(s)	1533
FblI	GTMKAC	1 cut(s)	134
Fnu4HI	GCNGC	5 cut(s)	872, 1083, 1418, 1529, 1655
FokI	GGATG	1 cut(s)	1463
FriOI	GRGCYC	3 cut(s)	476, 1138, 1324
Fsp4HI	GCNGC	5 cut(s)	872, 1083, 1418, 1529, 1655
FspBI	CTAG	3 cut(s)	108, 950, 1620
FspI	TGCGCA	1 cut(s)	604
GlaI	GCGC	2 cut(s)	19, 604
GluI	GCNGC	5 cut(s)	872, 1083, 1418, 1529, 1655
GsaI	CCCAGC	1 cut(s)	887
GsuI	CTGGAG	3 cut(s)	561, 863, 1211
HaeIII	GGCC	4 cut(s)	894, 1322, 1539, 1558
HapII	CCGG	1 cut(s)	96
HhaI	GCGC	2 cut(s)	20, 605
Hin1II	CATG	6 cut(s)	260, 530, 1056, 1060, 1165, 1394
Hin6I	GCGC	2 cut(s)	18, 603
HinP1I	GCGC	2 cut(s)	18, 603
HincII	GTYRAC	1 cut(s)	163
HindII	GTYRAC	1 cut(s)	163
HindIII	AAGCTT	1 cut(s)	1382
HinfI	GANTC	7 cut(s)	253, 349, 862, 904, 1023, 1331, 1409
HpaII	CCGG	1 cut(s)	96
HphI	GGTGA	6 cut(s)	262, 673, 1094, 1300, 1379, 1418
Hpy166II	GTNNAC	5 cut(s)	7, 135, 163, 709, 1495
Hpy8I	GTNNAC	5 cut(s)	7, 135, 163, 709, 1495
HpyAV	CCTTC	1 cut(s)	1514
HpyCH4III	ACNGT	6 cut(s)	132, 371, 572, 784, 1301, 1346
HpyCH4IV	ACGT	2 cut(s)	705, 759
HpyF10VI	GCNNNNNNNGC	4 cut(s)	880, 1555, 1651, 1663
HpyF3I	CTNAG	3 cut(s)	146, 313, 774
HpySE526I	ACGT	2 cut(s)	705, 759
Hsp92II	CATG	6 cut(s)	260, 530, 1056, 1060, 1165, 1394
HspAI	GCGC	2 cut(s)	18, 603
Kzo9I	GATC	7 cut(s)	453, 519, 1207, 1215, 1430, 1458, 1633
LmnI	GCTCC	2 cut(s)	887, 1574
Lsp1109I	GCAGC	4 cut(s)	858, 1094, 1515, 1641
LweI	GCATC	4 cut(s)	145, 883, 1013, 1367
MaeI	CTAG	3 cut(s)	108, 950, 1620
MaeII	ACGT	2 cut(s)	705, 759
MaeIII	GTNAC	4 cut(s)	535, 595, 755, 778
MalI	GATC	7 cut(s)	455, 521, 1209, 1217, 1432, 1460, 1635
MbiI	CCGCTC	1 cut(s)	890
MboI	GATC	7 cut(s)	453, 519, 1207, 1215, 1430, 1458, 1633
MboII	GAAGA	5 cut(s)	302, 434, 506, 1259, 1690
MfeI	CAATTG	2 cut(s)	171, 244
MflI	RGATCY	4 cut(s)	453, 519, 1215, 1430
MhlI	GDGCHC	3 cut(s)	476, 1138, 1324
MlyI	GAGTC	1 cut(s)	1017
MmeI	TCCRAC	3 cut(s)	547, 591, 876
Mph1103I	ATGCAT	1 cut(s)	1058
MroXI	GAANNNNTTC	1 cut(s)	348
MseI	TTAA	9 cut(s)	77, 216, 339, 618, 623, 986, 1169, 1314, 1542
MslI	CAYNNNNRTG	2 cut(s)	531, 1061
MspA1I	CMGCKG	3 cut(s)	883, 1085, 1528
MspI	CCGG	1 cut(s)	96
MspR9I	CCNGG	2 cut(s)	683, 1579
MunI	CAATTG	2 cut(s)	171, 244
Mva1269I	GAATGC	1 cut(s)	1620
MvaI	CCWGG	2 cut(s)	683, 1579
MwoI	GCNNNNNNNGC	4 cut(s)	880, 1555, 1651, 1663
NdeI	CATATG	1 cut(s)	1533
NdeII	GATC	7 cut(s)	453, 519, 1207, 1215, 1430, 1458, 1633
NlaIII	CATG	6 cut(s)	260, 530, 1056, 1060, 1165, 1394
NlaIV	GGNNCC	4 cut(s)	1217, 1322, 1497, 1576
NmuCI	GTSAC	2 cut(s)	535, 595
NsbI	TGCGCA	1 cut(s)	604
NsiI	ATGCAT	1 cut(s)	1058
NspI	RCATGY	2 cut(s)	530, 1056
PaeI	GCATGC	1 cut(s)	1056
PaeR7I	CTCGAG	2 cut(s)	551, 581
PciI	ACATGT	1 cut(s)	526
PcsI	WCGNNNNNNNCGW	1 cut(s)	711
PctI	GAATGC	1 cut(s)	1620
PdmI	GAANNNNTTC	1 cut(s)	348
PfeI	GAWTC	6 cut(s)	253, 349, 862, 904, 1331, 1409
PflFI	GACNNNGTC	1 cut(s)	11
PinAI	ACCGGT	1 cut(s)	95
PkrI	GCNGC	5 cut(s)	873, 1084, 1419, 1530, 1656
PleI	GAGTC	1 cut(s)	1017
PpsI	GAGTC	1 cut(s)	1017
PscI	ACATGT	1 cut(s)	526
PshBI	ATTAAT	1 cut(s)	339
PsiI	TTATAA	2 cut(s)	815, 969
Psp124BI	GAGCTC	1 cut(s)	1138
Psp6I	CCWGG	2 cut(s)	681, 1577
PspEI	GGTNACC	1 cut(s)	778
PspFI	CCCAGC	1 cut(s)	883
PspGI	CCWGG	2 cut(s)	681, 1577
PspN4I	GGNNCC	4 cut(s)	1217, 1322, 1497, 1576
PspOMI	GGGCCC	1 cut(s)	1320
PspPI	GGNCC	7 cut(s)	892, 1320, 1321, 1495, 1537, 1556, 1608
PsuI	RGATCY	4 cut(s)	453, 519, 1215, 1430
PsyI	GACNNNGTC	1 cut(s)	11
PvuII	CAGCTG	3 cut(s)	883, 1085, 1528
RsaI	GTAC	2 cut(s)	762, 1369
RsaNI	GTAC	2 cut(s)	761, 1368
RseI	CAYNNNNRTG	2 cut(s)	531, 1061
SacI	GAGCTC	1 cut(s)	1138
SaqAI	TTAA	9 cut(s)	77, 216, 339, 618, 623, 986, 1169, 1314, 1542
SatI	GCNGC	5 cut(s)	872, 1083, 1418, 1529, 1655
Sau3AI	GATC	7 cut(s)	453, 519, 1207, 1215, 1430, 1458, 1633
Sau96I	GGNCC	7 cut(s)	892, 1320, 1321, 1495, 1537, 1556, 1608
SchI	GAGTC	1 cut(s)	1017
ScrFI	CCNGG	2 cut(s)	683, 1579
SduI	GDGCHC	3 cut(s)	476, 1138, 1324
SfaNI	GCATC	4 cut(s)	145, 883, 1013, 1367
Sfr274I	CTCGAG	2 cut(s)	551, 581
SinI	GGWCC	2 cut(s)	1495, 1608
SlaI	CTCGAG	2 cut(s)	551, 581
SmiI	ATTTAAAT	1 cut(s)	987
SmiMI	CAYNNNNRTG	2 cut(s)	531, 1061
SmlI	CTYRAG	5 cut(s)	551, 581, 998, 1106, 1649
SmoI	CTYRAG	5 cut(s)	551, 581, 998, 1106, 1649
SpeI	ACTAGT	1 cut(s)	949
SphI	GCATGC	1 cut(s)	1056
SsiI	CCGC	3 cut(s)	890, 1404, 1417
SspI	AATATT	1 cut(s)	490
SspMI	CTAG	3 cut(s)	108, 950, 1620
SstI	GAGCTC	1 cut(s)	1138
StyD4I	CCNGG	2 cut(s)	681, 1577
StyI	CCWWGG	2 cut(s)	1211, 1499
SwaI	ATTTAAAT	1 cut(s)	987
TaaI	ACNGT	6 cut(s)	132, 371, 572, 784, 1301, 1346
TaiI	ACGT	2 cut(s)	708, 762
TaqI	TCGA	5 cut(s)	186, 552, 582, 641, 1132
TauI	GCSGC	1 cut(s)	1420
TfiI	GAWTC	6 cut(s)	253, 349, 862, 904, 1331, 1409
Tru1I	TTAA	9 cut(s)	77, 216, 339, 618, 623, 986, 1169, 1314, 1542
Tru9I	TTAA	9 cut(s)	77, 216, 339, 618, 623, 986, 1169, 1314, 1542
TscAI	CASTG	1 cut(s)	376
TseFI	GTSAC	2 cut(s)	535, 595
TseI	GCWGC	4 cut(s)	871, 1082, 1528, 1654
Tsp45I	GTSAC	2 cut(s)	535, 595
TspDTI	ATGAA	5 cut(s)	357, 627, 708, 968, 1344
TspRI	CASTG	1 cut(s)	376
Tth111I	GACNNNGTC	1 cut(s)	11
VpaK11BI	GGWCC	2 cut(s)	1495, 1608
VspI	ATTAAT	1 cut(s)	339
XapI	RAATTY	3 cut(s)	212, 293, 392
XceI	RCATGY	2 cut(s)	530, 1056
XhoI	CTCGAG	2 cut(s)	551, 581
XmiI	GTMKAC	1 cut(s)	134
XmnI	GAANNNNTTC	1 cut(s)	348
XspI	CTAG	3 cut(s)	108, 950, 1620
Zsp2I	ATGCAT	1 cut(s)	1058

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.