Rorug01G0194900

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000095
Physical Location & Seq
Forward (+)
27312668 .. 27353568
40901 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0194900.1

Sequence Viewer

Length: 1521 bp
ATGGTGCTTTTGGGAGTGGGGTTAGTGTTGGGTAACTTGGGTTCTATGTGGACTGTAATTTTGGGCACTGCAAGCTTTGTGGGTGTTTTGGTGGCCCTGAAATGGGTTCTGGAGAATGCAAATTGGTGGCTCTATGAAACCGAGTTGGGTGAGAAACAGTACTCTCTCCCACCTGGTGACTTGGGTTTGCCTTTCATCGGAAACATGTGGTCTTTCCTCAGAGCCTTCAAGTCCGACCACCCCGATTCCTTCATCAACTCCTTCGTTTCCAGATTTGGTAAAATCGGAATCTACAAGGCCTACATGTTCGGGTTTCCCAGTATCATTTGCACAGTGCCAGAAACATGTAAAAGAGTTTTGACAGATGATGACGCATTTAAGCCCGGGTGGCCTGTTTCCGCTGTGGAACTGATTGGAAGGAAATCATTCATTGGCATCTCTTTTGAAGAGCACAAGCGTCTGAGAAAAATAACAGCAGCTCCGGTCAATGGTCATGAAGCATTGTCTGTGTACATGAAGTATATCGAAGAGATTGTTATATCATCTTTGGAAAAGTGGTCCACCATGGGAGACATAGAGTTTTTAACTCAAGTCAGGAAGCTTACTTTTAGGATCATTATGCATATCTTCCTCAGCTCAGAGAGTGAGTCTGCAATGGAGGCTCTAGAGAGGGAATATACAGCACTTAACTATGGAGTTAGAGCCATGGCAATCAACATTCCTGGATTTGCGTACCATAAGGCGCTTAAGGCTCGGAAAAATCTTGTTGCTATTTTTCAGTCTAGTGTAGATGAGCGCAGAGCCCAAAAGAAGGCTGGCAATTTCTTCAGAAAGAAGAAAGATATGATGGACGCTCTGCTGGATGTTGAAGATGAAGATGGAAGGAAACTTACAGATGAAGAAGTCATTGACATTCTGCTAATGTACTTGAATGCTGGCCATGAGTCTTCTGGCCATACCATCATGTGGGCGACTGTTTTGCTACAAGAACATCCGGAAGTGTTCCAGAAAGCTAAGGCAGAGCAAGAAGAGATTTTAAAGAGGAGGCCACCAACACAGAAGGGACTGACACTTAAGGAATATCGAGAAATGGAATATCTTTCTAAGGTGATCGATGAAACTCTTCGGTTTGTATCATTCTCACTTGTGGTGTTTCGAGAGGCAAATAAAGATGTCAATATAAATGGTTATATCATTCCAAAGGGATGGAAAGCTTTGGCCTGGTTTAGGAGCGTTCACTGGGATTCTGAAATATATCCAAATCCAAAAGAATTTAACCCTTCTAGATGGGATAACTATACACCGAAACCAGCAACTTTTCTTCCCTTCGGAGCTGGAAGCAGGCTGTGCCCGGGAAATGATCTTGCTAAGCTGGAAATTGCTATTTTCCTACACCATTTTCTTCTTGGTTATGAGGTGGAGCGAATTAATCCTCAGTGCCCAATGATCCACTTGCCTCATCCTAGGCCAAAAGACAACTGCTTGGCAAGAATCAAGAAATGTGCACGTTCACGTGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

506

Amino Acids

57.87

Weight (kDa)

8.64

Isoelectric Point (pI)

43.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 57 - 477 1.6e-62 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 966
AccIII TCCGGA 1 cut(s) 994
AciI CCGC 1 cut(s) 399
AclWI GGATC 2 cut(s) 620, 1441
AcoI YGGCCR 2 cut(s) 937, 952
AcsI RAATTY 1 cut(s) 1271
AcuI CTGAAG 1 cut(s) 811
AcvI CACGTG 1 cut(s) 1514
AdeI CACNNNGTG 1 cut(s) 176
AfaI GTAC 4 cut(s) 161, 512, 734, 926
AfiI CCNNNNNNNGG 7 cut(s) 102, 103, 197, 488, 811, 966, 1227
AflII CTTAAG 2 cut(s) 746, 1073
AflIII ACRYGT 3 cut(s) 204, 303, 344
AgsI TTSAA 4 cut(s) 229, 446, 869, 931
AjnI CCWGG 3 cut(s) 172, 721, 1220
AluBI AGCT 8 cut(s) 75, 479, 601, 636, 1013, 1214, 1334, 1372
AluI AGCT 8 cut(s) 75, 479, 601, 636, 1013, 1214, 1334, 1372
Alw21I GWGCWC 2 cut(s) 453, 1507
Alw26I GTCTC 1 cut(s) 564
Alw44I GTGCAC 1 cut(s) 1503
AlwI GGATC 2 cut(s) 620, 1441
Ama87I CYCGRG 2 cut(s) 383, 1351
Aor13HI TCCGGA 1 cut(s) 994
AoxI GGCC 8 cut(s) 93, 297, 389, 937, 952, 1046, 1218, 1466
ApaLI GTGCAC 1 cut(s) 1503
ApeKI GCWGC 1 cut(s) 476
ApoI RAATTY 1 cut(s) 1271
ArsI GACNNNNNNTTYG 2 cut(s) 43, 75
AseI ATTAAT 1 cut(s) 1428
Asp700I GAANNNNTTC 2 cut(s) 425, 1122
AspA2I CCTAGG 1 cut(s) 1463
AspLEI GCGC 2 cut(s) 745, 798
AspS9I GGNCC 2 cut(s) 94, 558
AsuC2I CCSGG 4 cut(s) 384, 385, 1352, 1353
AsuHPI GGTGA 3 cut(s) 161, 188, 1120
AvaI CYCGRG 2 cut(s) 383, 1351
AvaII GGWCC 1 cut(s) 558
AvrII CCTAGG 1 cut(s) 1463
BaeGI GKGCMC 4 cut(s) 68, 1352, 1442, 1507
BalI TGGCCA 2 cut(s) 939, 954
BanII GRGCYC 1 cut(s) 805
BarI GAAGNNNNNNTAC 2 cut(s) 874, 906
BbrPI CACGTG 1 cut(s) 1514
BbsI GAAGAC 1 cut(s) 939
Bbv12I GWGCWC 2 cut(s) 453, 1507
BbvCI CCTCAGC 1 cut(s) 632
BbvI GCAGC 1 cut(s) 488
BccI CCATC 5 cut(s) 841, 872, 968, 1200, 1281
BcgI CGANNNNNNTGC 2 cut(s) 961, 995
BciT130I CCWGG 3 cut(s) 174, 723, 1222
BcnI CCSGG 4 cut(s) 384, 385, 1352, 1353
BcoDI GTCTC 1 cut(s) 564
BfaI CTAG 4 cut(s) 665, 783, 1284, 1464
BfoI RGCGCY 1 cut(s) 746
BfrI CTTAAG 2 cut(s) 746, 1073
BglI GCCNNNNNGGC 1 cut(s) 388
BisI GCNGC 1 cut(s) 477
BlnI CCTAGG 1 cut(s) 1463
BlpI GCTNAGC 1 cut(s) 1368
BlsI GCNGC 1 cut(s) 478
BmcAI AGTACT 1 cut(s) 161
Bme1390I CCNGG 7 cut(s) 174, 384, 385, 723, 1222, 1352, 1353
Bme18I GGWCC 1 cut(s) 558
BmeT110I CYCGRG 2 cut(s) 383, 1351
BmgT120I GGNCC 2 cut(s) 94, 558
BmrFI CCNGG 7 cut(s) 174, 384, 385, 723, 1222, 1352, 1353
BmrI ACTGGG 2 cut(s) 312, 1249
BmsI GCATC 1 cut(s) 444
BmuI ACTGGG 2 cut(s) 312, 1249
BpiI GAAGAC 1 cut(s) 939
BpmI CTGGAG 1 cut(s) 131
Bpu10I CCTNAGC 2 cut(s) 632, 1014
Bpu1102I GCTNAGC 1 cut(s) 1368
BpuEI CTTGAG 1 cut(s) 573
BpuMI CCSGG 4 cut(s) 384, 385, 1352, 1353
Bsa29I ATCGAT 1 cut(s) 1113
BsaAI YACGTR 1 cut(s) 1514
BsaJI CCNNGG 5 cut(s) 383, 564, 705, 1351, 1463
BsaWI WCCGGW 2 cut(s) 481, 994
BsaXI ACNNNNNCTCC 2 cut(s) 463, 493
Bsc4I CCNNNNNNNGG 7 cut(s) 102, 103, 197, 488, 811, 966, 1227
Bse1I ACTGG 2 cut(s) 318, 1244
Bse3DI GCAATG 1 cut(s) 660
BseAI TCCGGA 1 cut(s) 994
BseBI CCWGG 3 cut(s) 174, 723, 1222
BseCI ATCGAT 1 cut(s) 1113
BseDI CCNNGG 5 cut(s) 383, 564, 705, 1351, 1463
BseGI GGATG 4 cut(s) 868, 991, 1211, 1459
BseLI CCNNNNNNNGG 7 cut(s) 102, 103, 197, 488, 811, 966, 1227
BseMI GCAATG 1 cut(s) 660
BseMII CTCAG 5 cut(s) 232, 452, 646, 651, 1448
BseNI ACTGG 2 cut(s) 318, 1244
BseRI GAGGAG 1 cut(s) 1057
BseSI GKGCMC 4 cut(s) 68, 1352, 1442, 1507
BseXI GCAGC 1 cut(s) 488
BshFI GGCC 8 cut(s) 95, 299, 391, 939, 954, 1048, 1220, 1468
BshVI ATCGAT 1 cut(s) 1113
BsiHKAI GWGCWC 2 cut(s) 453, 1507
BsiHKCI CYCGRG 2 cut(s) 383, 1351
BsiSI CCGG 4 cut(s) 384, 482, 995, 1352
BslFI GGGAC 1 cut(s) 1077
BslI CCNNNNNNNGG 7 cut(s) 102, 103, 197, 488, 811, 966, 1227
BsmAI GTCTC 1 cut(s) 564
BsmFI GGGAC 1 cut(s) 1077
BsmI GAATGC 2 cut(s) 121, 937
BsnI GGCC 8 cut(s) 95, 299, 391, 939, 954, 1048, 1220, 1468
BsoBI CYCGRG 2 cut(s) 383, 1351
Bsp1286I GDGCHC 6 cut(s) 68, 453, 805, 1352, 1442, 1507
Bsp13I TCCGGA 1 cut(s) 994
Bsp1407I TGTACA 1 cut(s) 510
Bsp143I GATC 4 cut(s) 612, 1110, 1360, 1446
Bsp1720I GCTNAGC 1 cut(s) 1368
Bsp19I CCATGG 2 cut(s) 564, 705
BspACI CCGC 1 cut(s) 399
BspANI GGCC 8 cut(s) 95, 299, 391, 939, 954, 1048, 1220, 1468
BspCNI CTCAG 5 cut(s) 231, 453, 645, 650, 1447
BspDI ATCGAT 1 cut(s) 1113
BspEI TCCGGA 1 cut(s) 994
BspHI TCATGA 1 cut(s) 493
BspPI GGATC 2 cut(s) 620, 1441
BspQI GCTCTTC 1 cut(s) 441
BspTI CTTAAG 2 cut(s) 746, 1073
BsrDI GCAATG 1 cut(s) 660
BsrGI TGTACA 1 cut(s) 510
BsrI ACTGG 2 cut(s) 318, 1244
BssECI CCNNGG 5 cut(s) 383, 564, 705, 1351, 1463
BssMI GATC 4 cut(s) 612, 1110, 1360, 1446
BssT1I CCWWGG 3 cut(s) 564, 705, 1463
Bst2UI CCWGG 3 cut(s) 174, 723, 1222
Bst4CI ACNGT 4 cut(s) 55, 159, 334, 976
Bst6I CTCTTC 4 cut(s) 441, 522, 1023, 1128
BstAFI CTTAAG 2 cut(s) 746, 1073
BstAPI GCANNNNNTGC 1 cut(s) 1347
BstAUI TGTACA 1 cut(s) 510
BstBAI YACGTR 1 cut(s) 1514
BstC8I GCNNGC 4 cut(s) 73, 817, 937, 1343
BstDEI CTNAG 8 cut(s) 218, 461, 632, 637, 1014, 1104, 1368, 1434
BstDSI CCRYGG 2 cut(s) 564, 705
BstENI CCTNNNNNAGG 1 cut(s) 1225
BstF5I GGATG 4 cut(s) 868, 991, 1211, 1459
BstH2I RGCGCY 1 cut(s) 746
BstHHI GCGC 2 cut(s) 745, 798
BstKTI GATC 4 cut(s) 615, 1113, 1363, 1449
BstMAI GTCTC 1 cut(s) 564
BstMBI GATC 4 cut(s) 612, 1110, 1360, 1446
BstMWI GCNNNNNNNGC 5 cut(s) 72, 388, 659, 749, 1347
BstNI CCWGG 3 cut(s) 174, 723, 1222
BstNSI RCATGY 3 cut(s) 208, 307, 348
BstSCI CCNGG 7 cut(s) 172, 382, 383, 721, 1220, 1350, 1351
BstSLI GKGCMC 4 cut(s) 68, 1352, 1442, 1507
BstV1I GCAGC 1 cut(s) 488
BstV2I GAAGAC 1 cut(s) 939
BstXI CCANNNNNNTGG 1 cut(s) 1206
Bsu15I ATCGAT 1 cut(s) 1113
BsuRI GGCC 8 cut(s) 95, 299, 391, 939, 954, 1048, 1220, 1468
BsuTUI ATCGAT 1 cut(s) 1113
BtgI CCRYGG 2 cut(s) 564, 705
BtsCI GGATG 4 cut(s) 868, 991, 1211, 1459
BtsI GCAGTG 1 cut(s) 66
BtsIMutI CAGTG 4 cut(s) 66, 339, 1237, 1442
Cac8I GCNNGC 4 cut(s) 73, 817, 937, 1343
CciI TCATGA 1 cut(s) 493
CfoI GCGC 2 cut(s) 745, 798
Cfr13I GGNCC 2 cut(s) 94, 558
Cfr9I CCCGGG 2 cut(s) 383, 1351
ClaI ATCGAT 1 cut(s) 1113
CseI GACGC 3 cut(s) 380, 446, 860
CsiI ACCWGGT 1 cut(s) 172
Csp6I GTAC 4 cut(s) 160, 511, 733, 925
CspCI CAANNNNNGTGG 2 cut(s) 60, 95
CviAII CATG 9 cut(s) 205, 304, 345, 494, 514, 565, 706, 941, 964
CviQI GTAC 4 cut(s) 160, 511, 733, 925
DdeI CTNAG 8 cut(s) 218, 461, 632, 637, 1014, 1104, 1368, 1434
DpnI GATC 4 cut(s) 614, 1112, 1362, 1448
DpnII GATC 4 cut(s) 612, 1110, 1360, 1446
DraI TTTAAA 1 cut(s) 1038
DraIII CACNNNGTG 1 cut(s) 176
EaeI YGGCCR 2 cut(s) 937, 952
Eam1104I CTCTTC 4 cut(s) 441, 522, 1023, 1128
EarI CTCTTC 4 cut(s) 441, 522, 1023, 1128
Eco130I CCWWGG 3 cut(s) 564, 705, 1463
Eco147I AGGCCT 1 cut(s) 299
Eco24I GRGCYC 1 cut(s) 805
Eco47I GGWCC 1 cut(s) 558
Eco57I CTGAAG 1 cut(s) 811
Eco72I CACGTG 1 cut(s) 1514
Eco88I CYCGRG 2 cut(s) 383, 1351
EcoNI CCTNNNNNAGG 1 cut(s) 1225
EcoRII CCWGG 3 cut(s) 172, 721, 1220
EcoT14I CCWWGG 3 cut(s) 564, 705, 1463
EcoT22I ATGCAT 1 cut(s) 624
EcoT38I GRGCYC 1 cut(s) 805
ErhI CCWWGG 3 cut(s) 564, 705, 1463
FaeI CATG 9 cut(s) 208, 307, 348, 497, 517, 568, 709, 944, 967
FaqI GGGAC 1 cut(s) 1077
FatI CATG 9 cut(s) 204, 303, 344, 493, 513, 564, 705, 940, 963
Fnu4HI GCNGC 1 cut(s) 477
FokI GGATG 4 cut(s) 875, 978, 1218, 1446
FriOI GRGCYC 1 cut(s) 805
Fsp4HI GCNGC 1 cut(s) 477
FspBI CTAG 4 cut(s) 665, 783, 1284, 1464
GlaI GCGC 2 cut(s) 744, 797
GluI GCNGC 1 cut(s) 477
GsuI CTGGAG 1 cut(s) 131
HaeII RGCGCY 1 cut(s) 746
HaeIII GGCC 8 cut(s) 95, 299, 391, 939, 954, 1048, 1220, 1468
HapII CCGG 4 cut(s) 384, 482, 995, 1352
HgaI GACGC 3 cut(s) 380, 446, 860
HhaI GCGC 2 cut(s) 745, 798
Hin1II CATG 9 cut(s) 208, 307, 348, 497, 517, 568, 709, 944, 967
Hin6I GCGC 2 cut(s) 743, 796
HinP1I GCGC 2 cut(s) 743, 796
HindIII AAGCTT 3 cut(s) 73, 599, 1212
HinfI GANTC 6 cut(s) 245, 288, 647, 944, 1244, 1491
HpaII CCGG 4 cut(s) 384, 482, 995, 1352
HphI GGTGA 3 cut(s) 161, 188, 1120
Hpy166II GTNNAC 6 cut(s) 51, 511, 561, 1237, 1505, 1511
Hpy8I GTNNAC 6 cut(s) 51, 511, 561, 1237, 1505, 1511
HpyAV CCTTC 9 cut(s) 235, 259, 271, 411, 805, 876, 1054, 1290, 1336
HpyCH4III ACNGT 4 cut(s) 55, 159, 334, 976
HpyCH4IV ACGT 2 cut(s) 1507, 1513
HpyCH4V TGCA 7 cut(s) 71, 119, 330, 622, 653, 1505, 1517
HpyF10VI GCNNNNNNNGC 5 cut(s) 72, 388, 659, 749, 1347
HpyF3I CTNAG 8 cut(s) 218, 461, 632, 637, 1014, 1104, 1368, 1434
HpySE526I ACGT 2 cut(s) 1507, 1513
Hsp92II CATG 9 cut(s) 208, 307, 348, 497, 517, 568, 709, 944, 967
HspAI GCGC 2 cut(s) 743, 796
Kpn2I TCCGGA 1 cut(s) 994
Kzo9I GATC 4 cut(s) 612, 1110, 1360, 1446
LguI GCTCTTC 1 cut(s) 441
LmnI GCTCC 4 cut(s) 484, 1230, 1331, 1420
Lsp1109I GCAGC 1 cut(s) 488
LweI GCATC 1 cut(s) 444
MabI ACCWGGT 1 cut(s) 172
MaeI CTAG 4 cut(s) 665, 783, 1284, 1464
MaeII ACGT 2 cut(s) 1507, 1513
MaeIII GTNAC 2 cut(s) 32, 176
MalI GATC 4 cut(s) 614, 1112, 1362, 1448
MboI GATC 4 cut(s) 612, 1110, 1360, 1446
MhlI GDGCHC 6 cut(s) 68, 453, 805, 1352, 1442, 1507
MlsI TGGCCA 2 cut(s) 939, 954
MluCI AATT 6 cut(s) 57, 121, 820, 1271, 1377, 1425
MluNI TGGCCA 2 cut(s) 939, 954
MlyI GAGTC 2 cut(s) 656, 953
MmeI TCCRAC 1 cut(s) 258
Mox20I TGGCCA 2 cut(s) 939, 954
Mph1103I ATGCAT 1 cut(s) 624
MroI TCCGGA 1 cut(s) 994
MroXI GAANNNNTTC 2 cut(s) 425, 1122
MscI TGGCCA 2 cut(s) 939, 954
MseI TTAA 8 cut(s) 378, 584, 687, 747, 1037, 1074, 1275, 1428
Msp20I TGGCCA 2 cut(s) 939, 954
MspA1I CMGCKG 1 cut(s) 401
MspCI CTTAAG 2 cut(s) 746, 1073
MspI CCGG 4 cut(s) 384, 482, 995, 1352
MspR9I CCNGG 7 cut(s) 174, 384, 385, 723, 1222, 1352, 1353
Mva1269I GAATGC 2 cut(s) 121, 937
MvaI CCWGG 3 cut(s) 174, 723, 1222
MwoI GCNNNNNNNGC 5 cut(s) 72, 388, 659, 749, 1347
NciI CCSGG 4 cut(s) 384, 385, 1352, 1353
NcoI CCATGG 2 cut(s) 564, 705
NdeII GATC 4 cut(s) 612, 1110, 1360, 1446
NlaIII CATG 9 cut(s) 208, 307, 348, 497, 517, 568, 709, 944, 967
NmuCI GTSAC 1 cut(s) 176
NsiI ATGCAT 1 cut(s) 624
NspI RCATGY 3 cut(s) 208, 307, 348
PagI TCATGA 1 cut(s) 493
PceI AGGCCT 1 cut(s) 299
PciI ACATGT 3 cut(s) 204, 303, 344
PciSI GCTCTTC 1 cut(s) 441
PctI GAATGC 2 cut(s) 121, 937
PdmI GAANNNNTTC 2 cut(s) 425, 1122
PfeI GAWTC 4 cut(s) 245, 288, 1244, 1491
PflMI CCANNNNNTGG 1 cut(s) 966
PfoI TCCNGGA 1 cut(s) 721
PkrI GCNGC 1 cut(s) 478
PleI GAGTC 2 cut(s) 655, 952
PmaCI CACGTG 1 cut(s) 1514
PmlI CACGTG 1 cut(s) 1514
PpsI GAGTC 2 cut(s) 655, 952
Ppu21I YACGTR 1 cut(s) 1514
PscI ACATGT 3 cut(s) 204, 303, 344
PshBI ATTAAT 1 cut(s) 1428
Psp6I CCWGG 3 cut(s) 172, 721, 1220
PspCI CACGTG 1 cut(s) 1514
PspGI CCWGG 3 cut(s) 172, 721, 1220
PspPI GGNCC 2 cut(s) 94, 558
PsrI GAACNNNNNNTAC 2 cut(s) 25, 57
RsaI GTAC 4 cut(s) 161, 512, 734, 926
RsaNI GTAC 4 cut(s) 160, 511, 733, 925
SapI GCTCTTC 1 cut(s) 441
SaqAI TTAA 8 cut(s) 378, 584, 687, 747, 1037, 1074, 1275, 1428
SatI GCNGC 1 cut(s) 477
Sau3AI GATC 4 cut(s) 612, 1110, 1360, 1446
Sau96I GGNCC 2 cut(s) 94, 558
ScaI AGTACT 1 cut(s) 161
SchI GAGTC 2 cut(s) 656, 953
ScrFI CCNGG 7 cut(s) 174, 384, 385, 723, 1222, 1352, 1353
SduI GDGCHC 6 cut(s) 68, 453, 805, 1352, 1442, 1507
SexAI ACCWGGT 1 cut(s) 172
SfaNI GCATC 1 cut(s) 444
SinI GGWCC 1 cut(s) 558
SmaI CCCGGG 2 cut(s) 385, 1353
SmlI CTYRAG 3 cut(s) 588, 746, 1073
SmoI CTYRAG 3 cut(s) 588, 746, 1073
Sse9I AATT 6 cut(s) 57, 121, 820, 1271, 1377, 1425
SseBI AGGCCT 1 cut(s) 299
SsiI CCGC 1 cut(s) 399
SspMI CTAG 4 cut(s) 665, 783, 1284, 1464
StuI AGGCCT 1 cut(s) 299
StyD4I CCNGG 7 cut(s) 172, 382, 383, 721, 1220, 1350, 1351
StyI CCWWGG 3 cut(s) 564, 705, 1463
TaaI ACNGT 4 cut(s) 55, 159, 334, 976
TaiI ACGT 2 cut(s) 1510, 1516
TaqI TCGA 4 cut(s) 525, 1084, 1113, 1156
TasI AATT 6 cut(s) 57, 121, 820, 1271, 1377, 1425
TatI WGTACW 3 cut(s) 159, 510, 924
TfiI GAWTC 4 cut(s) 245, 288, 1244, 1491
Tru1I TTAA 8 cut(s) 378, 584, 687, 747, 1037, 1074, 1275, 1428
Tru9I TTAA 8 cut(s) 378, 584, 687, 747, 1037, 1074, 1275, 1428
TscAI CASTG 4 cut(s) 73, 339, 1244, 1442
TseFI GTSAC 1 cut(s) 176
TseI GCWGC 1 cut(s) 476
Tsp45I GTSAC 1 cut(s) 176
TspDTI ATGAA 9 cut(s) 150, 184, 241, 418, 510, 530, 888, 912, 1131
TspMI CCCGGG 2 cut(s) 383, 1351
TspRI CASTG 4 cut(s) 73, 339, 1244, 1442
Van91I CCANNNNNTGG 1 cut(s) 966
Vha464I CTTAAG 2 cut(s) 746, 1073
VneI GTGCAC 1 cut(s) 1503
VpaK11BI GGWCC 1 cut(s) 558
VspI ATTAAT 1 cut(s) 1428
XagI CCTNNNNNAGG 1 cut(s) 1225
XapI RAATTY 1 cut(s) 1271
XbaI TCTAGA 2 cut(s) 664, 1283
XceI RCATGY 3 cut(s) 208, 307, 348
XcmI CCANNNNNNNNNTGG 3 cut(s) 812, 947, 1403
XmaI CCCGGG 2 cut(s) 383, 1351
XmaJI CCTAGG 1 cut(s) 1463
XmnI GAANNNNTTC 2 cut(s) 425, 1122
XspI CTAG 4 cut(s) 665, 783, 1284, 1464
ZrmI AGTACT 1 cut(s) 161
Zsp2I ATGCAT 1 cut(s) 624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.