Rh2BG186100

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000095
Physical Location & Seq
Forward (+)
16631087 .. 16633428
2342 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG186100.1

Sequence Viewer

Length: 1383 bp
ATGGTTGAACCAAATAGCGAGGGTGGTTCCCACTTGAGCGAAAGAAAGAAGAAAGATGTTGCTGGCAACATGATGGACAGAATCAGTGGATTGCCGGATGAAATTCTTGTGAGTATACTGTCTCTGTTGCCCCTGAAGGAAGCGCAAGCTACTAGTATCCTTTCTAGGAGGTGGCAGTATGTGTGGGCGTATTGTACTACTCTCAACTTTGATGATGAGAAGAATTTAGTCAGATTGCGCCTGTCCGACAGAGAAGCACTCGAATTTGAAATGTGTAGGTACGTCAATTGGGTGGATAGTGTGTTGAAACAGCATAGAGCCTTAAACATTAAGCGATTCAGGGTTTATTTTAAGCTTGATTCTAGAAGTTGTATTGATAAATGGATTCAATTTGCAATGAGGAAAGGAGTTCAAATGCTTGAGTTGGACTTTGTATGTACTCTTTATCTACATCTTCCGAAATACAGATTTAGTAACAAACTGTTAGGTATCAGCAAAACCTCTGCTTCGAAGTCCTTGTGTTCTGAACACATTGGTTTTAAGTGCCTCAAAGTTCTTGATTTGAAAACTGTTGATGTGGACCAAGAAGTTCTTGAGTACTTTTTGTCTAACTCTCGAGGTCTTGAACGACTGTCCGTGTCTGATTCTTCAACACTGGTTAATCTAAAAGTAACCGGTCATTCTATTGCATTGAAGTACTTGGTGATAAAACGATGTAAAAATATCAAAACCATTGAGATCTGTGATTCAAACCTAGTTTCATTTGTTTATGATGGACCTGTGAGAAACTTGGTTCTTAGTAATCTACCACTTCTTGTTGAGGTTTCCCTTTTTGGATGGTTGGCACCCGATTTCTTAGAGATTGCCTTCTTACAACTGTCCTGCTATCTTTCTCAACTGGAGATTCTCAAATTCAGCTATATGAATGCGTGGAGCAAAATGGACCCTGTGCTTCCTTCATTACCTAATCTTAAGCGTTTGGAATTAGTAATTGATGAATATGAAAACTTTGCTCTTCTTCATCTCGCATCTTTCATTAAGGAATCTCCTTGCATGCATACACTTGTGTTGCGGTTATCACGATCATGGGGTAAAAAAAGTCCCTTTGCCAAGAAGCGAGCTGCAAAATGCTCCCATGCTTGTCTAAAGGTTGTGGAAATAGTAGGGTACAGCGGCCAGAGCCGTCAGACTGAACTTGTGATGTACTTGACAAAGACTGCAAGGAATCTGGAGAAAATTGTTTTTAATCCTGTTGCTCGTTGGGGTCCAAGCTTCGACAGACTACGAGATCATTCTGCAGTGAAGGATGAAGAGTGGTCAAGAGCTCAGGCTCGGCAGCTTAAAGAAAAATTGCCTGCAACTCTGGAAGTTGTGTGCCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

460

Amino Acids

52.89

Weight (kDa)

9.15

Isoelectric Point (pI)

46.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 28 - 63 1.3e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 101 - 421 2.5e-33 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 125 - 239 1.1e-08 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 376 - 415 8.4e-06 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 844
AccI GTMKAC 1 cut(s) 115
AciI CCGC 2 cut(s) 1072, 1173
AcoI YGGCCR 1 cut(s) 1174
AcsI RAATTY 4 cut(s) 102, 223, 263, 911
AcuI CTGAAG 1 cut(s) 155
AfaI GTAC 7 cut(s) 196, 281, 439, 599, 698, 1169, 1205
AflII CTTAAG 1 cut(s) 971
AgeI ACCGGT 1 cut(s) 674
AhlI ACTAGT 1 cut(s) 152
AluBI AGCT 7 cut(s) 149, 355, 918, 1121, 1272, 1325, 1339
AluI AGCT 7 cut(s) 149, 355, 918, 1121, 1272, 1325, 1339
Alw21I GWGCWC 1 cut(s) 1327
Alw26I GTCTC 1 cut(s) 126
Ama87I CYCGRG 1 cut(s) 615
AoxI GGCC 1 cut(s) 1174
ApeKI GCWGC 2 cut(s) 1121, 1336
ApoI RAATTY 4 cut(s) 102, 223, 263, 911
AsiGI ACCGGT 1 cut(s) 674
AspLEI GCGC 2 cut(s) 145, 240
AspS9I GGNCC 4 cut(s) 580, 776, 943, 1265
AsuHPI GGTGA 1 cut(s) 715
AsuII TTCGAA 1 cut(s) 509
AvaI CYCGRG 1 cut(s) 615
AvaII GGWCC 4 cut(s) 580, 776, 943, 1265
BanI GGYRCC 1 cut(s) 844
BanII GRGCYC 1 cut(s) 1327
Bbv12I GWGCWC 1 cut(s) 1327
BbvI GCAGC 2 cut(s) 1108, 1348
BccI CCATC 3 cut(s) 67, 767, 831
BceAI ACGGC 1 cut(s) 1167
BciVI GTATCC 1 cut(s) 167
BcoDI GTCTC 1 cut(s) 126
BcuI ACTAGT 1 cut(s) 152
BfaI CTAG 4 cut(s) 153, 165, 363, 755
BfmI CTRYAG 2 cut(s) 1296, 1379
BfrI CTTAAG 1 cut(s) 971
BfuI GTATCC 1 cut(s) 167
BglII AGATCT 1 cut(s) 738
BisI GCNGC 3 cut(s) 1122, 1174, 1337
BlsI GCNGC 3 cut(s) 1123, 1175, 1338
BmcAI AGTACT 2 cut(s) 599, 698
Bme18I GGWCC 4 cut(s) 580, 776, 943, 1265
BmeT110I CYCGRG 1 cut(s) 615
BmgT120I GGNCC 4 cut(s) 580, 776, 943, 1265
BmiI GGNNCC 4 cut(s) 28, 846, 945, 1266
BmsI GCATC 1 cut(s) 1037
BplI GAGNNNNNCTC 2 cut(s) 243, 275
BpmI CTGGAG 2 cut(s) 920, 1250
Bpu10I CCTNAGC 1 cut(s) 1326
Bpu14I TTCGAA 1 cut(s) 509
BpuEI CTTGAG 3 cut(s) 55, 440, 614
BsaWI WCCGGW 1 cut(s) 674
Bse118I RCCGGY 1 cut(s) 674
Bse1I ACTGG 2 cut(s) 660, 903
Bse3DI GCAATG 1 cut(s) 402
BseGI GGATG 3 cut(s) 103, 842, 1312
BseMI GCAATG 1 cut(s) 402
BseMII CTCAG 1 cut(s) 1340
BseNI ACTGG 2 cut(s) 660, 903
BseXI GCAGC 2 cut(s) 1108, 1348
BshFI GGCC 1 cut(s) 1176
BshNI GGYRCC 1 cut(s) 844
BshTI ACCGGT 1 cut(s) 674
BsiHKAI GWGCWC 1 cut(s) 1327
BsiHKCI CYCGRG 1 cut(s) 615
BsiSI CCGG 2 cut(s) 95, 675
BslFI GGGAC 1 cut(s) 1086
BsmAI GTCTC 1 cut(s) 126
BsmFI GGGAC 1 cut(s) 1086
BsmI GAATGC 1 cut(s) 931
BsnI GGCC 1 cut(s) 1176
BsoBI CYCGRG 1 cut(s) 615
Bsp119I TTCGAA 1 cut(s) 509
Bsp1286I GDGCHC 1 cut(s) 1327
Bsp143I GATC 3 cut(s) 738, 1082, 1288
BspACI CCGC 2 cut(s) 1072, 1173
BspANI GGCC 1 cut(s) 1176
BspCNI CTCAG 1 cut(s) 1339
BspLI GGNNCC 4 cut(s) 28, 846, 945, 1266
BspMAI CTGCAG 1 cut(s) 1300
BspQI GCTCTTC 1 cut(s) 1020
BspT104I TTCGAA 1 cut(s) 509
BspT107I GGYRCC 1 cut(s) 844
BspTI CTTAAG 1 cut(s) 971
BsrDI GCAATG 1 cut(s) 402
BsrFI RCCGGY 1 cut(s) 674
BsrI ACTGG 2 cut(s) 660, 903
BssAI RCCGGY 1 cut(s) 674
BssMI GATC 3 cut(s) 738, 1082, 1288
BssNAI GTATAC 1 cut(s) 116
Bst1107I GTATAC 1 cut(s) 116
Bst4CI ACNGT 5 cut(s) 120, 483, 571, 633, 879
Bst6I CTCTTC 2 cut(s) 1020, 1305
BstAFI CTTAAG 1 cut(s) 971
BstBI TTCGAA 1 cut(s) 509
BstC8I GCNNGC 5 cut(s) 64, 147, 1055, 1119, 1356
BstDEI CTNAG 3 cut(s) 797, 856, 1326
BstF5I GGATG 3 cut(s) 103, 842, 1312
BstHHI GCGC 2 cut(s) 145, 240
BstKTI GATC 3 cut(s) 741, 1085, 1291
BstMAI GTCTC 1 cut(s) 126
BstMBI GATC 3 cut(s) 738, 1082, 1288
BstMWI GCNNNNNNNGC 1 cut(s) 1179
BstNSI RCATGY 1 cut(s) 1057
BstSFI CTRYAG 2 cut(s) 1296, 1379
BstV1I GCAGC 2 cut(s) 1108, 1348
BstX2I RGATCY 1 cut(s) 738
BstYI RGATCY 1 cut(s) 738
BstZ17I GTATAC 1 cut(s) 116
BsuI GTATCC 1 cut(s) 167
BsuRI GGCC 1 cut(s) 1176
BtsCI GGATG 3 cut(s) 103, 842, 1312
BtsI GCAGTG 1 cut(s) 1305
BtsIMutI CAGTG 3 cut(s) 91, 653, 1305
Cac8I GCNNGC 5 cut(s) 64, 147, 1055, 1119, 1356
CfoI GCGC 2 cut(s) 145, 240
Cfr10I RCCGGY 1 cut(s) 674
Cfr13I GGNCC 4 cut(s) 580, 776, 943, 1265
Csp6I GTAC 7 cut(s) 195, 280, 438, 598, 697, 1168, 1204
CspAI ACCGGT 1 cut(s) 674
CviAII CATG 4 cut(s) 70, 1054, 1086, 1136
CviQI GTAC 7 cut(s) 195, 280, 438, 598, 697, 1168, 1204
DdeI CTNAG 3 cut(s) 797, 856, 1326
DpnI GATC 3 cut(s) 740, 1084, 1290
DpnII GATC 3 cut(s) 738, 1082, 1288
EaeI YGGCCR 1 cut(s) 1174
Eam1104I CTCTTC 2 cut(s) 1020, 1305
EarI CTCTTC 2 cut(s) 1020, 1305
Ecl136II GAGCTC 1 cut(s) 1325
Eco24I GRGCYC 1 cut(s) 1327
Eco47I GGWCC 4 cut(s) 580, 776, 943, 1265
Eco53kI GAGCTC 1 cut(s) 1325
Eco57I CTGAAG 1 cut(s) 155
Eco88I CYCGRG 1 cut(s) 615
EcoICRI GAGCTC 1 cut(s) 1325
EcoT22I ATGCAT 1 cut(s) 1059
EcoT38I GRGCYC 1 cut(s) 1327
FaeI CATG 4 cut(s) 73, 1057, 1089, 1139
FalI AAGNNNNNCTT 2 cut(s) 576, 608
FaqI GGGAC 1 cut(s) 1086
FatI CATG 4 cut(s) 69, 1053, 1085, 1135
FblI GTMKAC 1 cut(s) 115
Fnu4HI GCNGC 3 cut(s) 1122, 1174, 1337
FokI GGATG 3 cut(s) 110, 849, 1319
FriOI GRGCYC 1 cut(s) 1327
Fsp4HI GCNGC 3 cut(s) 1122, 1174, 1337
FspBI CTAG 4 cut(s) 153, 165, 363, 755
GlaI GCGC 2 cut(s) 144, 239
GluI GCNGC 3 cut(s) 1122, 1174, 1337
GsuI CTGGAG 2 cut(s) 920, 1250
HaeIII GGCC 1 cut(s) 1176
HapII CCGG 2 cut(s) 95, 675
HhaI GCGC 2 cut(s) 145, 240
Hin1II CATG 4 cut(s) 73, 1057, 1089, 1139
Hin6I GCGC 2 cut(s) 143, 238
HinP1I GCGC 2 cut(s) 143, 238
HindIII AAGCTT 2 cut(s) 353, 1270
HinfI GANTC 9 cut(s) 81, 336, 359, 385, 644, 746, 904, 1043, 1225
HpaII CCGG 2 cut(s) 95, 675
HphI GGTGA 1 cut(s) 715
Hpy166II GTNNAC 2 cut(s) 116, 580
Hpy188I TCNGA 6 cut(s) 233, 247, 459, 526, 643, 1188
Hpy188III TCNNGA 9 cut(s) 363, 557, 593, 615, 623, 1080, 1229, 1320, 1364
Hpy8I GTNNAC 2 cut(s) 116, 580
HpyAV CCTTC 4 cut(s) 130, 877, 966, 1297
HpyCH4III ACNGT 5 cut(s) 120, 483, 571, 633, 879
HpyCH4IV ACGT 1 cut(s) 282
HpyCH4V TGCA 8 cut(s) 395, 689, 1053, 1057, 1124, 1220, 1298, 1358
HpyF10VI GCNNNNNNNGC 1 cut(s) 1179
HpyF3I CTNAG 3 cut(s) 797, 856, 1326
HpySE526I ACGT 1 cut(s) 282
Hsp92II CATG 4 cut(s) 73, 1057, 1089, 1139
HspAI GCGC 2 cut(s) 143, 238
Kzo9I GATC 3 cut(s) 738, 1082, 1288
LguI GCTCTTC 1 cut(s) 1020
LmnI GCTCC 2 cut(s) 933, 1136
Lsp1109I GCAGC 2 cut(s) 1108, 1348
LweI GCATC 1 cut(s) 1037
MaeI CTAG 4 cut(s) 153, 165, 363, 755
MaeII ACGT 1 cut(s) 282
MaeIII GTNAC 2 cut(s) 473, 670
MalI GATC 3 cut(s) 740, 1084, 1290
MboI GATC 3 cut(s) 738, 1082, 1288
MboII GAAGA 7 cut(s) 61, 232, 446, 639, 1007, 1010, 1322
MfeI CAATTG 1 cut(s) 286
MflI RGATCY 1 cut(s) 738
MhlI GDGCHC 1 cut(s) 1327
MmeI TCCRAC 2 cut(s) 270, 405
MnlI CCTC 7 cut(s) 13, 162, 393, 511, 557, 611, 814
Mph1103I ATGCAT 1 cut(s) 1059
MseI TTAA 9 cut(s) 323, 330, 351, 540, 660, 972, 1038, 1245, 1341
MslI CAYNNNNRTG 1 cut(s) 1084
MspA1I CMGCKG 1 cut(s) 1173
MspCI CTTAAG 1 cut(s) 971
MspI CCGG 2 cut(s) 95, 675
MunI CAATTG 1 cut(s) 286
Mva1269I GAATGC 1 cut(s) 931
MwoI GCNNNNNNNGC 1 cut(s) 1179
NdeII GATC 3 cut(s) 738, 1082, 1288
NlaIII CATG 4 cut(s) 73, 1057, 1089, 1139
NlaIV GGNNCC 4 cut(s) 28, 846, 945, 1266
NmeAIII GCCGAG 1 cut(s) 1312
NsiI ATGCAT 1 cut(s) 1059
NspI RCATGY 1 cut(s) 1057
NspV TTCGAA 1 cut(s) 509
PaeI GCATGC 1 cut(s) 1057
PaeR7I CTCGAG 1 cut(s) 615
PciSI GCTCTTC 1 cut(s) 1020
PctI GAATGC 1 cut(s) 931
PfeI GAWTC 9 cut(s) 81, 336, 359, 385, 644, 746, 904, 1043, 1225
PinAI ACCGGT 1 cut(s) 674
PkrI GCNGC 3 cut(s) 1123, 1175, 1338
Psp124BI GAGCTC 1 cut(s) 1327
PspN4I GGNNCC 4 cut(s) 28, 846, 945, 1266
PspPI GGNCC 4 cut(s) 580, 776, 943, 1265
PstI CTGCAG 1 cut(s) 1300
PsuI RGATCY 1 cut(s) 738
RsaI GTAC 7 cut(s) 196, 281, 439, 599, 698, 1169, 1205
RsaNI GTAC 7 cut(s) 195, 280, 438, 598, 697, 1168, 1204
RseI CAYNNNNRTG 1 cut(s) 1084
SacI GAGCTC 1 cut(s) 1327
SapI GCTCTTC 1 cut(s) 1020
SaqAI TTAA 9 cut(s) 323, 330, 351, 540, 660, 972, 1038, 1245, 1341
SatI GCNGC 3 cut(s) 1122, 1174, 1337
Sau3AI GATC 3 cut(s) 738, 1082, 1288
Sau96I GGNCC 4 cut(s) 580, 776, 943, 1265
ScaI AGTACT 2 cut(s) 599, 698
SduI GDGCHC 1 cut(s) 1327
SfaNI GCATC 1 cut(s) 1037
SfcI CTRYAG 2 cut(s) 1296, 1379
Sfr274I CTCGAG 1 cut(s) 615
SfuI TTCGAA 1 cut(s) 509
SinI GGWCC 4 cut(s) 580, 776, 943, 1265
SlaI CTCGAG 1 cut(s) 615
SmiMI CAYNNNNRTG 1 cut(s) 1084
SmlI CTYRAG 5 cut(s) 34, 419, 593, 615, 971
SmoI CTYRAG 5 cut(s) 34, 419, 593, 615, 971
SpeI ACTAGT 1 cut(s) 152
SphI GCATGC 1 cut(s) 1057
SsiI CCGC 2 cut(s) 1072, 1173
SspMI CTAG 4 cut(s) 153, 165, 363, 755
SstI GAGCTC 1 cut(s) 1327
TaaI ACNGT 5 cut(s) 120, 483, 571, 633, 879
TaiI ACGT 1 cut(s) 285
TaqI TCGA 4 cut(s) 261, 509, 616, 1275
TatI WGTACW 5 cut(s) 194, 437, 597, 696, 1203
TauI GCSGC 1 cut(s) 1176
TfiI GAWTC 9 cut(s) 81, 336, 359, 385, 644, 746, 904, 1043, 1225
Tru1I TTAA 9 cut(s) 323, 330, 351, 540, 660, 972, 1038, 1245, 1341
Tru9I TTAA 9 cut(s) 323, 330, 351, 540, 660, 972, 1038, 1245, 1341
TscAI CASTG 3 cut(s) 91, 660, 1305
TseI GCWGC 2 cut(s) 1121, 1336
TspDTI ATGAA 9 cut(s) 114, 750, 938, 948, 1010, 1011, 1017, 1024, 1323
TspGWI ACGGA 1 cut(s) 625
TspRI CASTG 3 cut(s) 91, 660, 1305
Vha464I CTTAAG 1 cut(s) 971
VpaK11BI GGWCC 4 cut(s) 580, 776, 943, 1265
XapI RAATTY 4 cut(s) 102, 223, 263, 911
XbaI TCTAGA 1 cut(s) 362
XceI RCATGY 1 cut(s) 1057
XhoI CTCGAG 1 cut(s) 615
XmiI GTMKAC 1 cut(s) 115
XspI CTAG 4 cut(s) 153, 165, 363, 755
ZrmI AGTACT 2 cut(s) 599, 698
Zsp2I ATGCAT 1 cut(s) 1059
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.