RchiOBHm_Chr7g0184481

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000095
Physical Location & Seq
Forward (+)
4998440 .. 4999867
1428 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16460

Sequence Viewer

Length: 1428 bp
ATGAAGAGAAAGGTATGTCAGACTTCTGAAATTGACGACCAGAACAAATCGATAAAATTAGAGTCAGTGGATCGAATTAGTGAGTTGTCAGATGATATTATTTCAAGCATATTGTCCCTCTTGCCGATAAAGGAAGCCGAAGCTACTAGTATTCTCTCTAGTCGATGGCGGTATATGTGGGCATTTTCAACTAGGAATCTTTATTTTGATGCTGAAGAATGTCTACGTGCCTTTCCGGCCCTCAGTCGAGAACTGAGGGACCAGAAAAGTCTCAGATATGTTGATTGGGTCGATCATGTGGTGGAACAATATAGGGGATCAGGCATCGAACAATTCAGGGTTTGCTTTCGTTTAAATCGACGTTTTGCAAGTTCCATTGATAAATGGATTCAGTTTGCATTGGAAAAGAGGACTCAGGTCCTTGTTTTGGAGCTCTTGCTGCTAATTGATGAGTCGTCTAGGAAAGATTCTTATACTTTTCCCCAGAAACTATTAGATCTAAACTACTCTAATGGATGCATCGGTTTTGAGTCGCTCAAAGTTCTTGAATTGAGGAATGTTGATGTGACTGATGAAGTTGTTCAGCACTTCTTGTCCAAATGTCCAGTTCTTGAACGACTATCGATATGTTATGCTACAAATCTGGTCAATTTTAAAGCCGCAGGTCCGTCAATTGCGTTGAAGCATTTGGTGATCAAGAATTGTTTTGCCTTGAAAAGCATTGAGGTTTGTGACACTTCTGGTCTTGTTTCGTTTACTTTTGATGGGTTTGGAGATGAAATAAGTTTGTCACTCTGTAATCTACCACTTCTCGTTAGGATTGATGTATCCATACACTTCTGCGAGTTCCCTCTCATCAGTGGTTCTTTCGGCCGACTCTCACTCTCACGTTCTCTTCCTCAGCTTGAGACCCTAGGGTTAGCGATCCATAGCTCCTATTTGGACTTTAAGCGGTTCAATGATGTGTTTCCAATTCCTACACTGCTACCAAATCTAAAGCATTTGGAATTAGCAGTACTCGAAACAGATGCTCATGGTCTTCGAAAATTATATTCCTTCTTGAAGGCATCTCCTCATTTGCAGAGACTTGTATTACAGTGTGAATTCTCATTTAACGAGCAGCCCTTTGATGAATCATTACAGCAAGCTGGTGAATGCAAACATCATAATCTTAAGGTGGTACAAGTGGTAGGATATCGTGCGAGAAAAATTATTGCCACGTGTGTCAACTACTTGATAGAGAATGTTTTATCACTTGAGAAGATTGTTATTGATCCTCGTCGACCAGGCTTTCATTATACTGGAATGGGAAAGCGCATTGAAGAGGTGGAGGAGGAAAGGAAGGCAAGAGATCACGCAATGCATCAACTCAAGAAACAAGTGCCTTCAACTATTGAATGTCTATGCAATTATGTAGACCTCGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

475

Amino Acids

54.55

Weight (kDa)

6.52

Isoelectric Point (pI)

45.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 103 - 466 3.1e-28 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 174 - 246 1.9e-06 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 653
AccI GTMKAC 3 cut(s) 223, 1282, 1416
AciI CCGC 3 cut(s) 169, 660, 952
AclWI GGATC 4 cut(s) 78, 325, 919, 1268
AcoI YGGCCR 1 cut(s) 871
AcsI RAATTY 1 cut(s) 1103
AcuI CTGAAG 1 cut(s) 234
AcvI CACGTG 1 cut(s) 1221
AfaI GTAC 2 cut(s) 1017, 1182
AfiI CCNNNNNNNGG 1 cut(s) 427
AflII CTTAAG 1 cut(s) 1172
AflIII ACRYGT 1 cut(s) 1220
AhlI ACTAGT 1 cut(s) 146
AjnI CCWGG 1 cut(s) 1285
AluBI AGCT 5 cut(s) 143, 433, 904, 933, 1148
AluI AGCT 5 cut(s) 143, 433, 904, 933, 1148
Alw21I GWGCWC 1 cut(s) 435
Alw26I GTCTC 3 cut(s) 275, 902, 1078
AlwI GGATC 4 cut(s) 78, 325, 919, 1268
Ama87I CYCGRG 1 cut(s) 1421
AoxI GGCC 2 cut(s) 237, 871
ApeKI GCWGC 2 cut(s) 439, 1120
ApoI RAATTY 1 cut(s) 1103
Asp700I GAANNNNTTC 1 cut(s) 579
AspA2I CCTAGG 1 cut(s) 913
AspLEI GCGC 1 cut(s) 1317
AspS9I GGNCC 4 cut(s) 238, 259, 418, 665
AsuHPI GGTGA 2 cut(s) 703, 1163
AsuII TTCGAA 1 cut(s) 1042
AvaI CYCGRG 1 cut(s) 1421
AvaII GGWCC 3 cut(s) 259, 418, 665
AvrII CCTAGG 1 cut(s) 913
BanII GRGCYC 1 cut(s) 435
BarI GAAGNNNNNNTAC 2 cut(s) 207, 239
BbrPI CACGTG 1 cut(s) 1221
BbsI GAAGAC 1 cut(s) 1031
Bbv12I GWGCWC 1 cut(s) 435
BbvCI CCTCAGC 1 cut(s) 900
BbvI GCAGC 2 cut(s) 426, 1132
BccI CCATC 2 cut(s) 159, 758
BcgI CGANNNNNNTGC 2 cut(s) 1010, 1044
BciT130I CCWGG 1 cut(s) 1287
BciVI GTATCC 1 cut(s) 838
BclI TGATCA 1 cut(s) 693
BcoDI GTCTC 3 cut(s) 275, 902, 1078
BcuI ACTAGT 1 cut(s) 146
BfaI CTAG 5 cut(s) 147, 159, 192, 459, 914
BfrI CTTAAG 1 cut(s) 1172
BfuAI ACCTGC 1 cut(s) 653
BfuI GTATCC 1 cut(s) 838
BglI GCCNNNNNGGC 1 cut(s) 236
BglII AGATCT 1 cut(s) 496
BisI GCNGC 3 cut(s) 440, 660, 1121
BlnI CCTAGG 1 cut(s) 913
BlsI GCNGC 3 cut(s) 441, 661, 1122
BmcAI AGTACT 1 cut(s) 1017
Bme1390I CCNGG 1 cut(s) 1287
Bme18I GGWCC 3 cut(s) 259, 418, 665
BmeT110I CYCGRG 1 cut(s) 1421
BmgT120I GGNCC 4 cut(s) 238, 259, 418, 665
BmiI GGNNCC 1 cut(s) 260
BmrFI CCNGG 1 cut(s) 1287
BmsI GCATC 7 cut(s) 199, 333, 506, 528, 1018, 1076, 1372
BoxI GACNNNNGTC 1 cut(s) 416
BpiI GAAGAC 1 cut(s) 1031
Bpu10I CCTNAGC 1 cut(s) 900
Bpu14I TTCGAA 1 cut(s) 1042
BpuEI CTTGAG 3 cut(s) 926, 1277, 1355
Bsa29I ATCGAT 2 cut(s) 50, 623
BsaAI YACGTR 2 cut(s) 227, 1221
BsaI GGTCTC 1 cut(s) 902
BsaJI CCNNGG 1 cut(s) 913
Bsc4I CCNNNNNNNGG 1 cut(s) 427
Bse1I ACTGG 2 cut(s) 605, 1306
Bse3DI GCAATG 1 cut(s) 1365
BseBI CCWGG 1 cut(s) 1287
BseCI ATCGAT 2 cut(s) 50, 623
BseDI CCNNGG 1 cut(s) 913
BseGI GGATG 1 cut(s) 521
BseLI CCNNNNNNNGG 1 cut(s) 427
BseMI GCAATG 1 cut(s) 1365
BseMII CTCAG 5 cut(s) 245, 256, 286, 428, 914
BseNI ACTGG 2 cut(s) 605, 1306
BseRI GAGGAG 2 cut(s) 1062, 1346
BseX3I CGGCCG 1 cut(s) 871
BseXI GCAGC 2 cut(s) 426, 1132
Bsh1285I CGRYCG 1 cut(s) 874
BshFI GGCC 2 cut(s) 239, 873
BshVI ATCGAT 2 cut(s) 50, 623
BsiEI CGRYCG 1 cut(s) 874
BsiHKAI GWGCWC 1 cut(s) 435
BsiHKCI CYCGRG 1 cut(s) 1421
BsiSI CCGG 1 cut(s) 236
BslFI GGGAC 2 cut(s) 100, 272
BslI CCNNNNNNNGG 1 cut(s) 427
BsmAI GTCTC 3 cut(s) 275, 902, 1078
BsmFI GGGAC 2 cut(s) 100, 272
BsmI GAATGC 1 cut(s) 1160
BsnI GGCC 2 cut(s) 239, 873
Bso31I GGTCTC 1 cut(s) 902
BsoBI CYCGRG 1 cut(s) 1421
Bsp119I TTCGAA 1 cut(s) 1042
Bsp1286I GDGCHC 1 cut(s) 435
Bsp143I GATC 8 cut(s) 70, 292, 317, 496, 693, 924, 1273, 1351
BspACI CCGC 3 cut(s) 169, 660, 952
BspANI GGCC 2 cut(s) 239, 873
BspCNI CTCAG 5 cut(s) 246, 255, 285, 427, 913
BspDI ATCGAT 2 cut(s) 50, 623
BspLI GGNNCC 1 cut(s) 260
BspMI ACCTGC 1 cut(s) 653
BspPI GGATC 4 cut(s) 78, 325, 919, 1268
BspT104I TTCGAA 1 cut(s) 1042
BspTI CTTAAG 1 cut(s) 1172
BspTNI GGTCTC 1 cut(s) 902
BsrDI GCAATG 1 cut(s) 1365
BsrI ACTGG 2 cut(s) 605, 1306
BssECI CCNNGG 1 cut(s) 913
BssMI GATC 8 cut(s) 70, 292, 317, 496, 693, 924, 1273, 1351
BssT1I CCWWGG 1 cut(s) 913
Bst2UI CCWGG 1 cut(s) 1287
Bst4CI ACNGT 1 cut(s) 1098
Bst6I CTCTTC 2 cut(s) 900, 1317
BstAFI CTTAAG 1 cut(s) 1172
BstBAI YACGTR 2 cut(s) 227, 1221
BstBI TTCGAA 1 cut(s) 1042
BstC8I GCNNGC 1 cut(s) 1146
BstDEI CTNAG 5 cut(s) 242, 254, 272, 414, 900
BstF5I GGATG 1 cut(s) 521
BstHHI GCGC 1 cut(s) 1317
BstKTI GATC 8 cut(s) 73, 295, 320, 499, 696, 927, 1276, 1354
BstMAI GTCTC 3 cut(s) 275, 902, 1078
BstMBI GATC 8 cut(s) 70, 292, 317, 496, 693, 924, 1273, 1351
BstMCI CGRYCG 1 cut(s) 874
BstMWI GCNNNNNNNGC 2 cut(s) 236, 439
BstNI CCWGG 1 cut(s) 1287
BstPAI GACNNNNGTC 1 cut(s) 416
BstSCI CCNGG 1 cut(s) 1285
BstV1I GCAGC 2 cut(s) 426, 1132
BstV2I GAAGAC 1 cut(s) 1031
BstX2I RGATCY 1 cut(s) 496
BstYI RGATCY 1 cut(s) 496
BstZI CGGCCG 1 cut(s) 871
Bsu15I ATCGAT 2 cut(s) 50, 623
BsuI GTATCC 1 cut(s) 838
BsuRI GGCC 2 cut(s) 239, 873
BsuTUI ATCGAT 2 cut(s) 50, 623
BtsCI GGATG 1 cut(s) 521
BtsI GCAGTG 1 cut(s) 980
BtsIMutI CAGTG 4 cut(s) 72, 865, 980, 1103
BveI ACCTGC 1 cut(s) 653
Cac8I GCNNGC 1 cut(s) 1146
CfoI GCGC 1 cut(s) 1317
Cfr13I GGNCC 4 cut(s) 238, 259, 418, 665
ClaI ATCGAT 2 cut(s) 50, 623
Csp6I GTAC 2 cut(s) 1016, 1181
CviAII CATG 2 cut(s) 296, 1034
CviQI GTAC 2 cut(s) 1016, 1181
DdeI CTNAG 5 cut(s) 242, 254, 272, 414, 900
DpnI GATC 8 cut(s) 72, 294, 319, 498, 695, 926, 1275, 1353
DpnII GATC 8 cut(s) 70, 292, 317, 496, 693, 924, 1273, 1351
DraI TTTAAA 2 cut(s) 354, 655
EaeI YGGCCR 1 cut(s) 871
EagI CGGCCG 1 cut(s) 871
Eam1104I CTCTTC 2 cut(s) 900, 1317
EarI CTCTTC 2 cut(s) 900, 1317
Ecl136II GAGCTC 1 cut(s) 433
EclXI CGGCCG 1 cut(s) 871
Eco130I CCWWGG 1 cut(s) 913
Eco24I GRGCYC 1 cut(s) 435
Eco31I GGTCTC 1 cut(s) 902
Eco32I GATATC 1 cut(s) 1196
Eco47I GGWCC 3 cut(s) 259, 418, 665
Eco52I CGGCCG 1 cut(s) 871
Eco53kI GAGCTC 1 cut(s) 433
Eco57I CTGAAG 1 cut(s) 234
Eco72I CACGTG 1 cut(s) 1221
Eco88I CYCGRG 1 cut(s) 1421
EcoICRI GAGCTC 1 cut(s) 433
EcoO109I RGGNCCY 1 cut(s) 418
EcoRI GAATTC 1 cut(s) 1103
EcoRII CCWGG 1 cut(s) 1285
EcoRV GATATC 1 cut(s) 1196
EcoT14I CCWWGG 1 cut(s) 913
EcoT22I ATGCAT 2 cut(s) 521, 1365
EcoT38I GRGCYC 1 cut(s) 435
ErhI CCWWGG 1 cut(s) 913
FaeI CATG 2 cut(s) 299, 1037
FaqI GGGAC 2 cut(s) 100, 272
FatI CATG 2 cut(s) 295, 1033
FbaI TGATCA 1 cut(s) 693
FblI GTMKAC 3 cut(s) 223, 1282, 1416
Fnu4HI GCNGC 3 cut(s) 440, 660, 1121
FokI GGATG 1 cut(s) 528
FriOI GRGCYC 1 cut(s) 435
Fsp4HI GCNGC 3 cut(s) 440, 660, 1121
FspBI CTAG 5 cut(s) 147, 159, 192, 459, 914
GlaI GCGC 1 cut(s) 1316
GluI GCNGC 3 cut(s) 440, 660, 1121
HaeIII GGCC 2 cut(s) 239, 873
HapII CCGG 1 cut(s) 236
HhaI GCGC 1 cut(s) 1317
Hin1II CATG 2 cut(s) 299, 1037
Hin6I GCGC 1 cut(s) 1315
HinP1I GCGC 1 cut(s) 1315
HincII GTYRAC 2 cut(s) 1228, 1283
HindII GTYRAC 2 cut(s) 1228, 1283
HinfI GANTC 9 cut(s) 62, 196, 388, 412, 452, 467, 530, 876, 1133
HpaII CCGG 1 cut(s) 236
HphI GGTGA 2 cut(s) 703, 1163
Hpy166II GTNNAC 5 cut(s) 224, 756, 1228, 1283, 1417
Hpy188I TCNGA 4 cut(s) 21, 28, 91, 275
Hpy188III TCNNGA 6 cut(s) 248, 545, 611, 697, 1060, 1372
Hpy8I GTNNAC 5 cut(s) 224, 756, 1228, 1283, 1417
Hpy99I CGWCG 2 cut(s) 363, 1284
HpyAV CCTTC 4 cut(s) 1057, 1066, 1336, 1395
HpyCH4III ACNGT 1 cut(s) 1098
HpyCH4IV ACGT 4 cut(s) 226, 361, 889, 1220
HpyCH4V TGCA 7 cut(s) 368, 398, 519, 1081, 1158, 1363, 1407
HpyF10VI GCNNNNNNNGC 2 cut(s) 236, 439
HpyF3I CTNAG 5 cut(s) 242, 254, 272, 414, 900
HpySE526I ACGT 4 cut(s) 226, 361, 889, 1220
Hsp92II CATG 2 cut(s) 299, 1037
HspAI GCGC 1 cut(s) 1315
Ksp22I TGATCA 1 cut(s) 693
Kzo9I GATC 8 cut(s) 70, 292, 317, 496, 693, 924, 1273, 1351
LmnI GCTCC 2 cut(s) 430, 938
Lsp1109I GCAGC 2 cut(s) 426, 1132
LweI GCATC 7 cut(s) 199, 333, 506, 528, 1018, 1076, 1372
MaeI CTAG 5 cut(s) 147, 159, 192, 459, 914
MaeII ACGT 4 cut(s) 226, 361, 889, 1220
MaeIII GTNAC 3 cut(s) 565, 731, 789
MalI GATC 8 cut(s) 72, 294, 319, 498, 695, 926, 1275, 1353
MboI GATC 8 cut(s) 70, 292, 317, 496, 693, 924, 1273, 1351
MboII GAAGA 6 cut(s) 16, 227, 887, 1031, 1273, 1334
MfeI CAATTG 1 cut(s) 672
MflI RGATCY 1 cut(s) 496
MhlI GDGCHC 1 cut(s) 435
MlyI GAGTC 5 cut(s) 71, 406, 461, 539, 870
Mph1103I ATGCAT 2 cut(s) 521, 1365
MroXI GAANNNNTTC 1 cut(s) 579
MseI TTAA 5 cut(s) 353, 654, 948, 1113, 1173
MspCI CTTAAG 1 cut(s) 1172
MspI CCGG 1 cut(s) 236
MspR9I CCNGG 1 cut(s) 1287
MunI CAATTG 1 cut(s) 672
Mva1269I GAATGC 1 cut(s) 1160
MvaI CCWGG 1 cut(s) 1287
MwoI GCNNNNNNNGC 2 cut(s) 236, 439
NdeII GATC 8 cut(s) 70, 292, 317, 496, 693, 924, 1273, 1351
NlaIII CATG 2 cut(s) 299, 1037
NlaIV GGNNCC 1 cut(s) 260
NmuCI GTSAC 3 cut(s) 565, 731, 789
NsiI ATGCAT 2 cut(s) 521, 1365
NspV TTCGAA 1 cut(s) 1042
PaeR7I CTCGAG 1 cut(s) 1421
PcsI WCGNNNNNNNCGW 1 cut(s) 355
PctI GAATGC 1 cut(s) 1160
PdmI GAANNNNTTC 1 cut(s) 579
PfeI GAWTC 4 cut(s) 196, 388, 467, 1133
PkrI GCNGC 3 cut(s) 441, 661, 1122
PleI GAGTC 5 cut(s) 70, 406, 460, 538, 870
PmaCI CACGTG 1 cut(s) 1221
PmlI CACGTG 1 cut(s) 1221
PpsI GAGTC 5 cut(s) 70, 406, 460, 538, 870
Ppu21I YACGTR 2 cut(s) 227, 1221
PpuMI RGGWCCY 1 cut(s) 418
PshAI GACNNNNGTC 1 cut(s) 416
Psp124BI GAGCTC 1 cut(s) 435
Psp5II RGGWCCY 1 cut(s) 418
Psp6I CCWGG 1 cut(s) 1285
PspCI CACGTG 1 cut(s) 1221
PspGI CCWGG 1 cut(s) 1285
PspN4I GGNNCC 1 cut(s) 260
PspPI GGNCC 4 cut(s) 238, 259, 418, 665
PspPPI RGGWCCY 1 cut(s) 418
PspXI VCTCGAGB 1 cut(s) 1421
PsuI RGATCY 1 cut(s) 496
RsaI GTAC 2 cut(s) 1017, 1182
RsaNI GTAC 2 cut(s) 1016, 1181
SacI GAGCTC 1 cut(s) 435
SalI GTCGAC 1 cut(s) 1281
SaqAI TTAA 5 cut(s) 353, 654, 948, 1113, 1173
SatI GCNGC 3 cut(s) 440, 660, 1121
Sau3AI GATC 8 cut(s) 70, 292, 317, 496, 693, 924, 1273, 1351
Sau96I GGNCC 4 cut(s) 238, 259, 418, 665
ScaI AGTACT 1 cut(s) 1017
SchI GAGTC 5 cut(s) 71, 406, 461, 539, 870
ScrFI CCNGG 1 cut(s) 1287
SduI GDGCHC 1 cut(s) 435
SfaNI GCATC 7 cut(s) 199, 333, 506, 528, 1018, 1076, 1372
Sfr274I CTCGAG 1 cut(s) 1421
SfuI TTCGAA 1 cut(s) 1042
SinI GGWCC 3 cut(s) 259, 418, 665
SlaI CTCGAG 1 cut(s) 1421
SmlI CTYRAG 5 cut(s) 905, 1172, 1256, 1370, 1421
SmoI CTYRAG 5 cut(s) 905, 1172, 1256, 1370, 1421
SpeI ACTAGT 1 cut(s) 146
SsiI CCGC 3 cut(s) 169, 660, 952
SspMI CTAG 5 cut(s) 147, 159, 192, 459, 914
SstI GAGCTC 1 cut(s) 435
StyD4I CCNGG 1 cut(s) 1285
StyI CCWWGG 1 cut(s) 913
TaaI ACNGT 1 cut(s) 1098
TaiI ACGT 4 cut(s) 229, 364, 892, 1223
TatI WGTACW 1 cut(s) 1015
TauI GCSGC 1 cut(s) 662
TfiI GAWTC 4 cut(s) 196, 388, 467, 1133
Tru1I TTAA 5 cut(s) 353, 654, 948, 1113, 1173
Tru9I TTAA 5 cut(s) 353, 654, 948, 1113, 1173
TscAI CASTG 4 cut(s) 72, 865, 987, 1103
TseFI GTSAC 3 cut(s) 565, 731, 789
TseI GCWGC 2 cut(s) 439, 1120
Tsp45I GTSAC 3 cut(s) 565, 731, 789
TspDTI ATGAA 5 cut(s) 17, 588, 792, 1146, 1283
TspGWI ACGGA 1 cut(s) 657
TspRI CASTG 4 cut(s) 72, 865, 987, 1103
Vha464I CTTAAG 1 cut(s) 1172
VpaK11BI GGWCC 3 cut(s) 259, 418, 665
XapI RAATTY 1 cut(s) 1103
XhoI CTCGAG 1 cut(s) 1421
XmaJI CCTAGG 1 cut(s) 913
XmiI GTMKAC 3 cut(s) 223, 1282, 1416
XmnI GAANNNNTTC 1 cut(s) 579
XspI CTAG 5 cut(s) 147, 159, 192, 459, 914
ZrmI AGTACT 1 cut(s) 1017
Zsp2I ATGCAT 2 cut(s) 521, 1365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.