FvH4_6g05160

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000095
Physical Location & Seq
Forward (+)
2899777 .. 2903386
3610 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g05160.t1

Sequence Viewer

Length: 1491 bp
ATGAATATAACAGACGATGATCTTGATCAAGGTCATGGTGTAGAAGATTGTGATATTCTTGATGTTGATAAACAACAACGGTATCTTGATAAAACCTTGACTGACACTGAAAATGGTGACGGCTTCTTCGACTTCCTCAAATCTCCTGTTGCTGACACAGGTTTCTATTTCAAGGACAATGTGCAAAACTTGGTGGGGGTGGACAGGATTAGTGCATTGCCAGATGATCTTATAGTTAGTATAGTGTCTCTGCTGCCTCTAAAGGAAGCAGCAGCTACTAGTGTGCTATCTACTCGATGGCGCCACATCTGGACCTTCGTTACCACTCTCGATTTTCACCACGACATTCTTTTCCAACTGCGTTCATACAAACGAGTAAGAATAGAGTCAGAACTTGATAGGTACTTGAATTGGGTGAATAATGTAATGAAACAACATAGAGGCCCAAGTATCAATCTGCTTAGGGTTTATGCCGGTATAAATGATCCCAAGTACGAAAATTCCATTCATACATGGGGTCAATTCGCCTTGGAAAAGAGAGTCCAAAACTTTGATTTGCTCCTTTCTGAAAACAGAGGTTTCCCCAAAAGAGGAGGAAACGAGATTAAGGCAGTCTTTAGTACTTTTCCCCATTCGCACCAATTTGTAAATGTGGACAGATTAGGGTCTGACTTGTGCTCTAAACCTGATATTCTACACCCTTGTCTATACACTTGTTTTAGTGCATTCAGTTGCTTGAAGTACCTTAGAGTTCTTGAATTCAGGTTTGTTATAGGACTTACTGGGCAAGTTCTAGAGTGCTTCTTGTCTCACTGTCCACTTCTTGAGCGATTAACAGTAGTTCGCACTTTAGGGTTGGATAGTTTTAAAGTTATCGGCCCGTCAATTGCTTTGAAATACTTGCACATACATAAACATACTGGTCCTGTGAACATTGAGATTTGTGATGTAAAACTTGTTTCATTTATTTATGGTGGAGGCGGGATAAACTTGCTGCTTAAGAATGTGCCGCAGCTTGTTGAGGTCTCCATTTCTTCCCGCCGAGTTTCATTTGGACAGTGTGGTTCTCATCATCAGCTAGAGGTTTTCAGAATGAGGGGATTTGTGCTAAACAATGAGAAACATGTACTTCCTACATATGTGAATCTCAAGTATTTGGAACTGGGATTGAAGGAACGTGACAGTTGCTGTCTTCTTCAATTAATGTCTTTCATGGAGGCATCTCCTTATTTGCACAAACTTGTATTGAAGGCATATAATCTTATTAAAACTTGTGATTTAGAACTTGTTAGGTACTTGATAGAGAATGCTGCTGAACTAAAAGAGCTTCTTATGCATCCTGTTCGACAATGGTTTTCTCGTGAGCGGATCAGGTTTATAATGGGTAACAGAGAGGAGGTGGAGTGGATAGAAAAGGAGGAAAGAAAACAAGCTATTCAGCAGCTTAAAGAACTAGTGCCTTCTAGTTTAGAATTCATATGCAGGCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

497

Amino Acids

57.28

Weight (kDa)

6.81

Isoelectric Point (pI)

39.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 70 - 105 1e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 142 - 419 4.7e-14 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1379
AccB1I GGYRCC 1 cut(s) 300
AccBSI CCGCTC 1 cut(s) 1366
AciI CCGC 4 cut(s) 981, 1010, 1039, 1366
AclWI GGATC 2 cut(s) 479, 1376
AcsI RAATTY 3 cut(s) 499, 758, 1472
AcyI GRCGYC 1 cut(s) 301
AfaI GTAC 6 cut(s) 404, 494, 622, 743, 1128, 1295
AfiI CCNNNNNNNGG 1 cut(s) 590
AflII CTTAAG 1 cut(s) 998
AflIII ACRYGT 1 cut(s) 1123
AgsI TTSAA 8 cut(s) 172, 409, 739, 758, 895, 1171, 1199, 1249
AhlI ACTAGT 2 cut(s) 278, 1453
AluBI AGCT 6 cut(s) 275, 1015, 1078, 1327, 1433, 1444
AluI AGCT 6 cut(s) 275, 1015, 1078, 1327, 1433, 1444
Alw21I GWGCWC 1 cut(s) 680
Alw26I GTCTC 3 cut(s) 252, 813, 1030
AlwI GGATC 2 cut(s) 479, 1376
AlwNI CAGNNNCTG 1 cut(s) 1188
AoxI GGCC 2 cut(s) 442, 877
ApeKI GCWGC 7 cut(s) 253, 269, 272, 994, 1012, 1310, 1441
ApoI RAATTY 3 cut(s) 499, 758, 1472
ArsI GACNNNNNNTTYG 2 cut(s) 110, 142
AseI ATTAAT 1 cut(s) 1202
AspLEI GCGC 1 cut(s) 303
AspS9I GGNCC 4 cut(s) 312, 443, 878, 923
AsuHPI GGTGA 3 cut(s) 128, 329, 427
AvaII GGWCC 2 cut(s) 312, 923
BaeI ACNNNNGTAYC 2 cut(s) 65, 98
BanI GGYRCC 1 cut(s) 300
BauI CACGAG 1 cut(s) 1359
BbsI GAAGAC 1 cut(s) 1184
Bbv12I GWGCWC 1 cut(s) 680
BbvI GCAGC 7 cut(s) 240, 281, 284, 981, 1024, 1297, 1453
BccI CCATC 1 cut(s) 291
BceAI ACGGC 1 cut(s) 136
BcgI CGANNNNNNTGC 2 cut(s) 1325, 1359
BclI TGATCA 1 cut(s) 25
BcoDI GTCTC 3 cut(s) 252, 813, 1030
BcuI ACTAGT 2 cut(s) 278, 1453
BfaI CTAG 5 cut(s) 279, 794, 1079, 1454, 1464
BfmI CTRYAG 1 cut(s) 1487
BfoI RGCGCY 1 cut(s) 304
BfrI CTTAAG 1 cut(s) 998
BisI GCNGC 8 cut(s) 254, 270, 273, 995, 1010, 1013, 1311, 1442
BlsI GCNGC 8 cut(s) 255, 271, 274, 996, 1011, 1014, 1312, 1443
BmcAI AGTACT 1 cut(s) 622
Bme18I GGWCC 2 cut(s) 312, 923
BmgT120I GGNCC 4 cut(s) 312, 443, 878, 923
BmiI GGNNCC 1 cut(s) 302
BmrI ACTGGG 2 cut(s) 792, 1172
BmsI GCATC 2 cut(s) 1229, 1345
BmuI ACTGGG 2 cut(s) 792, 1172
BpiI GAAGAC 1 cut(s) 1184
Bpu10I CCTNAGC 1 cut(s) 461
BpuEI CTTGAG 2 cut(s) 845, 1133
BsaBI GATNNNNATC 1 cut(s) 24
BsaHI GRCGYC 1 cut(s) 301
BsaI GGTCTC 1 cut(s) 1030
BsaJI CCNNGG 1 cut(s) 528
BsaXI ACNNNNNCTCC 2 cut(s) 1388, 1418
Bsc4I CCNNNNNNNGG 1 cut(s) 590
Bse118I RCCGGY 1 cut(s) 473
Bse1I ACTGG 3 cut(s) 787, 925, 1167
Bse3DI GCAATG 1 cut(s) 215
Bse8I GATNNNNATC 1 cut(s) 24
BseDI CCNNGG 1 cut(s) 528
BseGI GGATG 1 cut(s) 1336
BseJI GATNNNNATC 1 cut(s) 24
BseLI CCNNNNNNNGG 1 cut(s) 590
BseMI GCAATG 1 cut(s) 215
BseNI ACTGG 3 cut(s) 787, 925, 1167
BseRI GAGGAG 2 cut(s) 606, 1409
BseXI GCAGC 7 cut(s) 240, 281, 284, 981, 1024, 1297, 1453
BshFI GGCC 2 cut(s) 444, 879
BshNI GGYRCC 1 cut(s) 300
BsiHKAI GWGCWC 1 cut(s) 680
BsiSI CCGG 1 cut(s) 474
BslI CCNNNNNNNGG 1 cut(s) 590
BsmAI GTCTC 3 cut(s) 252, 813, 1030
BsmI GAATGC 2 cut(s) 725, 1312
BsnI GGCC 2 cut(s) 444, 879
Bso31I GGTCTC 1 cut(s) 1030
Bsp1286I GDGCHC 1 cut(s) 680
Bsp143I GATC 5 cut(s) 19, 25, 226, 484, 1368
BspACI CCGC 4 cut(s) 981, 1010, 1039, 1366
BspANI GGCC 2 cut(s) 444, 879
BspLI GGNNCC 1 cut(s) 302
BspPI GGATC 2 cut(s) 479, 1376
BspT107I GGYRCC 1 cut(s) 300
BspTI CTTAAG 1 cut(s) 998
BspTNI GGTCTC 1 cut(s) 1030
BsrBI CCGCTC 1 cut(s) 1366
BsrDI GCAATG 1 cut(s) 215
BsrFI RCCGGY 1 cut(s) 473
BsrI ACTGG 3 cut(s) 787, 925, 1167
BssAI RCCGGY 1 cut(s) 473
BssECI CCNNGG 1 cut(s) 528
BssMI GATC 5 cut(s) 19, 25, 226, 484, 1368
BssNI GRCGYC 1 cut(s) 301
BssSI CACGAG 1 cut(s) 1359
BssT1I CCWWGG 1 cut(s) 528
Bst2BI CACGAG 1 cut(s) 1359
Bst4CI ACNGT 5 cut(s) 81, 815, 838, 1059, 1184
BstACI GRCGYC 1 cut(s) 301
BstAFI CTTAAG 1 cut(s) 998
BstC8I GCNNGC 1 cut(s) 1484
BstDEI CTNAG 2 cut(s) 461, 746
BstF5I GGATG 1 cut(s) 1336
BstH2I RGCGCY 1 cut(s) 304
BstHHI GCGC 1 cut(s) 303
BstKTI GATC 5 cut(s) 22, 28, 229, 487, 1371
BstMAI GTCTC 3 cut(s) 252, 813, 1030
BstMBI GATC 5 cut(s) 19, 25, 226, 484, 1368
BstMWI GCNNNNNNNGC 1 cut(s) 1333
BstNSI RCATGY 1 cut(s) 1127
BstSFI CTRYAG 1 cut(s) 1487
BstV1I GCAGC 7 cut(s) 240, 281, 284, 981, 1024, 1297, 1453
BstV2I GAAGAC 1 cut(s) 1184
BsuRI GGCC 2 cut(s) 444, 879
BtsCI GGATG 1 cut(s) 1336
BtsIMutI CAGTG 3 cut(s) 105, 811, 1064
Cac8I GCNNGC 1 cut(s) 1484
CaiI CAGNNNCTG 1 cut(s) 1188
CfoI GCGC 1 cut(s) 303
Cfr10I RCCGGY 1 cut(s) 473
Cfr13I GGNCC 4 cut(s) 312, 443, 878, 923
Csp6I GTAC 6 cut(s) 403, 493, 621, 742, 1127, 1294
CviAII CATG 4 cut(s) 35, 513, 1124, 1213
CviQI GTAC 6 cut(s) 403, 493, 621, 742, 1127, 1294
DdeI CTNAG 2 cut(s) 461, 746
DinI GGCGCC 1 cut(s) 302
DpnI GATC 5 cut(s) 21, 27, 228, 486, 1370
DpnII GATC 5 cut(s) 19, 25, 226, 484, 1368
DraI TTTAAA 1 cut(s) 868
Eco130I CCWWGG 1 cut(s) 528
Eco31I GGTCTC 1 cut(s) 1030
Eco47I GGWCC 2 cut(s) 312, 923
EcoRI GAATTC 2 cut(s) 758, 1472
EcoT14I CCWWGG 1 cut(s) 528
EcoT22I ATGCAT 1 cut(s) 1338
EgeI GGCGCC 1 cut(s) 302
EheI GGCGCC 1 cut(s) 302
ErhI CCWWGG 1 cut(s) 528
FaeI CATG 4 cut(s) 38, 516, 1127, 1216
FalI AAGNNNNNCTT 4 cut(s) 599, 631, 1314, 1346
FatI CATG 4 cut(s) 34, 512, 1123, 1212
FauI CCCGC 2 cut(s) 974, 1046
FauNDI CATATG 2 cut(s) 1138, 1478
FbaI TGATCA 1 cut(s) 25
Fnu4HI GCNGC 8 cut(s) 254, 270, 273, 995, 1010, 1013, 1311, 1442
FokI GGATG 1 cut(s) 1323
Fsp4HI GCNGC 8 cut(s) 254, 270, 273, 995, 1010, 1013, 1311, 1442
FspBI CTAG 5 cut(s) 279, 794, 1079, 1454, 1464
GlaI GCGC 1 cut(s) 302
GluI GCNGC 8 cut(s) 254, 270, 273, 995, 1010, 1013, 1311, 1442
HaeII RGCGCY 1 cut(s) 304
HaeIII GGCC 2 cut(s) 444, 879
HapII CCGG 1 cut(s) 474
HhaI GCGC 1 cut(s) 303
Hin1I GRCGYC 1 cut(s) 301
Hin1II CATG 4 cut(s) 38, 516, 1127, 1216
Hin6I GCGC 1 cut(s) 301
HinP1I GCGC 1 cut(s) 301
HinfI GANTC 3 cut(s) 386, 540, 1144
HpaII CCGG 1 cut(s) 474
HphI GGTGA 3 cut(s) 128, 329, 427
Hpy166II GTNNAC 4 cut(s) 202, 655, 818, 931
Hpy188I TCNGA 4 cut(s) 391, 568, 670, 1091
Hpy188III TCNNGA 9 cut(s) 23, 59, 86, 310, 329, 755, 794, 824, 1361
Hpy8I GTNNAC 4 cut(s) 202, 655, 818, 931
HpyAV CCTTC 4 cut(s) 325, 1165, 1243, 1470
HpyCH4III ACNGT 5 cut(s) 81, 815, 838, 1059, 1184
HpyCH4IV ACGT 1 cut(s) 1177
HpyCH4V TGCA 7 cut(s) 184, 215, 725, 904, 1234, 1336, 1482
HpyF10VI GCNNNNNNNGC 1 cut(s) 1333
HpyF3I CTNAG 2 cut(s) 461, 746
HpySE526I ACGT 1 cut(s) 1177
Hsp92I GRCGYC 1 cut(s) 301
Hsp92II CATG 4 cut(s) 38, 516, 1127, 1216
HspAI GCGC 1 cut(s) 301
KasI GGCGCC 1 cut(s) 300
Ksp22I TGATCA 1 cut(s) 25
Kzo9I GATC 5 cut(s) 19, 25, 226, 484, 1368
LmnI GCTCC 1 cut(s) 564
Lsp1109I GCAGC 7 cut(s) 240, 281, 284, 981, 1024, 1297, 1453
LweI GCATC 2 cut(s) 1229, 1345
MaeI CTAG 5 cut(s) 279, 794, 1079, 1454, 1464
MaeII ACGT 1 cut(s) 1177
MaeIII GTNAC 4 cut(s) 116, 319, 1178, 1385
MalI GATC 5 cut(s) 21, 27, 228, 486, 1370
MbiI CCGCTC 1 cut(s) 1366
MboI GATC 5 cut(s) 19, 25, 226, 484, 1368
MboII GAAGA 5 cut(s) 56, 118, 1026, 1184, 1187
MfeI CAATTG 1 cut(s) 885
MhlI GDGCHC 1 cut(s) 680
MluCI AATT 8 cut(s) 409, 499, 521, 641, 758, 885, 1199, 1472
Mly113I GGCGCC 1 cut(s) 301
MlyI GAGTC 2 cut(s) 395, 549
MmeI TCCRAC 2 cut(s) 379, 837
Mph1103I ATGCAT 1 cut(s) 1338
MseI TTAA 7 cut(s) 606, 833, 867, 999, 1202, 1266, 1446
MspCI CTTAAG 1 cut(s) 998
MspI CCGG 1 cut(s) 474
MunI CAATTG 1 cut(s) 885
Mva1269I GAATGC 2 cut(s) 725, 1312
MwoI GCNNNNNNNGC 1 cut(s) 1333
NarI GGCGCC 1 cut(s) 301
NdeI CATATG 2 cut(s) 1138, 1478
NdeII GATC 5 cut(s) 19, 25, 226, 484, 1368
NlaIII CATG 4 cut(s) 38, 516, 1127, 1216
NlaIV GGNNCC 1 cut(s) 302
NmeAIII GCCGAG 1 cut(s) 1067
NmuCI GTSAC 2 cut(s) 116, 1178
NsiI ATGCAT 1 cut(s) 1338
NspI RCATGY 1 cut(s) 1127
PciI ACATGT 1 cut(s) 1123
PcsI WCGNNNNNNNCGW 1 cut(s) 126
PctI GAATGC 2 cut(s) 725, 1312
PfeI GAWTC 1 cut(s) 1144
PkrI GCNGC 8 cut(s) 255, 271, 274, 996, 1011, 1014, 1312, 1443
PleI GAGTC 2 cut(s) 394, 548
PluTI GGCGCC 1 cut(s) 304
PpsI GAGTC 2 cut(s) 394, 548
PscI ACATGT 1 cut(s) 1123
PshBI ATTAAT 1 cut(s) 1202
PsiI TTATAA 1 cut(s) 1379
PspN4I GGNNCC 1 cut(s) 302
PspPI GGNCC 4 cut(s) 312, 443, 878, 923
PstNI CAGNNNCTG 1 cut(s) 1188
RsaI GTAC 6 cut(s) 404, 494, 622, 743, 1128, 1295
RsaNI GTAC 6 cut(s) 403, 493, 621, 742, 1127, 1294
SaqAI TTAA 7 cut(s) 606, 833, 867, 999, 1202, 1266, 1446
SatI GCNGC 8 cut(s) 254, 270, 273, 995, 1010, 1013, 1311, 1442
Sau3AI GATC 5 cut(s) 19, 25, 226, 484, 1368
Sau96I GGNCC 4 cut(s) 312, 443, 878, 923
ScaI AGTACT 1 cut(s) 622
SchI GAGTC 2 cut(s) 395, 549
SduI GDGCHC 1 cut(s) 680
SfaNI GCATC 2 cut(s) 1229, 1345
SfcI CTRYAG 1 cut(s) 1487
SfoI GGCGCC 1 cut(s) 302
SinI GGWCC 2 cut(s) 312, 923
SmlI CTYRAG 3 cut(s) 824, 998, 1148
SmoI CTYRAG 3 cut(s) 824, 998, 1148
SpeI ACTAGT 2 cut(s) 278, 1453
Sse9I AATT 8 cut(s) 409, 499, 521, 641, 758, 885, 1199, 1472
SsiI CCGC 4 cut(s) 981, 1010, 1039, 1366
SspDI GGCGCC 1 cut(s) 300
SspMI CTAG 5 cut(s) 279, 794, 1079, 1454, 1464
StyI CCWWGG 1 cut(s) 528
TaaI ACNGT 5 cut(s) 81, 815, 838, 1059, 1184
TaiI ACGT 1 cut(s) 1180
TaqI TCGA 4 cut(s) 129, 295, 330, 1345
TasI AATT 8 cut(s) 409, 499, 521, 641, 758, 885, 1199, 1472
TatI WGTACW 2 cut(s) 620, 1126
TauI GCSGC 1 cut(s) 1012
TfiI GAWTC 1 cut(s) 1144
Tru1I TTAA 7 cut(s) 606, 833, 867, 999, 1202, 1266, 1446
Tru9I TTAA 7 cut(s) 606, 833, 867, 999, 1202, 1266, 1446
TscAI CASTG 3 cut(s) 112, 818, 1064
TseFI GTSAC 2 cut(s) 116, 1178
TseI GCWGC 7 cut(s) 253, 269, 272, 994, 1012, 1310, 1441
Tsp45I GTSAC 2 cut(s) 116, 1178
TspDTI ATGAA 8 cut(s) 17, 354, 443, 497, 951, 1038, 1201, 1465
TspRI CASTG 3 cut(s) 112, 818, 1064
Vha464I CTTAAG 1 cut(s) 998
VpaK11BI GGWCC 2 cut(s) 312, 923
VspI ATTAAT 1 cut(s) 1202
XapI RAATTY 3 cut(s) 499, 758, 1472
XbaI TCTAGA 1 cut(s) 793
XceI RCATGY 1 cut(s) 1127
XspI CTAG 5 cut(s) 279, 794, 1079, 1454, 1464
ZrmI AGTACT 1 cut(s) 622
Zsp2I ATGCAT 1 cut(s) 1338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.