Rorug01G0277300

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000095
Physical Location & Seq
Reverse (-)
38955054 .. 38956614
1561 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0277300.1

Sequence Viewer

Length: 1515 bp
ATGGATACTGCTTTTCCAGTGTGGCTCAGAAGTCAAAAATTCCTCGAGGAATTAATTCTTCGGAGAGTCAGAATTTCAGATACAATACCCGATTGGTTTTGGAGATTTTCACCATTCCTTTGGGATGTGGATTTATCTCATAACCAGTTAAGAGGAAACCTTCCTAAGTCTGTGAGTTCTACTCTTCAATCCGTTATTTTGAAAGCCAACAGCTTGGTAGGCTTCTTTCCACTTTGGCCAAATGTAACATATCTAAGCTTGTCAAGAAATAGATTTTCAGGGCCTATTCCTTTGAACATTGGCCATGAGATGTCAAATTTACAAATCCTAGGTCTTTCTAGGAATAGTCTAACTGGCAGTGTTCCCCCTTCCTTGAGTAAAATGAAGTCATTGGAGGCTCTTGATCTCTCAAGGAATTATTTCTCCGGAAATATTCCTAGGGATTGGACTGGTTTGCAAGATTTGGAGGTCATAGACTTTTCAAATAACAATCTATCTGGCGAAATCCCAAGCTCCATGTGCTCCCAACTACCATCACTCAAATGGTTGAGATTAAGCAACAACAATCTTTCTGGGAATCTTGAGTCGTCTTTGCAAACTTGCAGAAATCTCTCTGCACTTGATCTGACAGGAAACAACTTTTCCGGCACCATACCAGATTGTATTGGAGAAAACCTTCATACATTGTCTTATTTACTTCTAGGAGCCAACAAGTTCACAGGAAATATTCCTCATCAATTATGCGATCTCTCCTCTCTTCAGGTTTTAGACCTTTCCCAAAATAATATATCTGGCTCCATTCCTGCATGTCTTGGTGGTTTGAAACAAATGACAACAGGAGATAGCTTGCGTAGCGACAGGATGATGAACTTGACGTCGACTAATCGTGTGCATATAGACTTAAATGTGAAAGGAGTAGAATATGAATATATTGATCATGTCATAGGACTCATCAAAAAGTTTGACCTGTCAAGTAATAACCTATGGGGAGAAATACCAGAAGAGGTGAAAAATCTTATGGCATTGGGTAGCTTGAACTTATCCCATAATCATTTGACAGGAAAGATACCAGAGGGTATCGGAAGCTTACATAAGTTAGAAGCACTTGACCTCTCTAGTAACCATCTTTGGGGTTTAATTCCTTCAGACATGACCTCTATGACTTCACTAAGCAAATTGAATTTGTCATTCAACAACTTCTCTGGGCCAATCCCATCAGCCAACCAATTCCCCACCTTTGATCCATCCTCATTTGAAGGAAACTCCGGACTTTGTGGACCCCCATTGCCAATCCAATGCAGCTCAACGTCCCCTAATGATCCAGATGTGAAGGTTGAGGAAGATGAAGAAGATAAGTATGGAAATTTATGGTTCTATGCAAGCACAGCATTGGGGTTCATTGTAGGATTTTGGGTTGTTTTTGGAAGTTTGGTGATAAAGAGGTCATGGAGACATGCTTACTTCCAGTTTCTTGACAATATGAAAGACAAGCTTTGCTTCTGTTTTTGGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

504

Amino Acids

56.21

Weight (kDa)

5.79

Isoelectric Point (pI)

45.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 80 - 140 4.5e-08 Leucine rich repeat
LRR_8 PF13855 150 - 190 7.2e-07 Leucine rich repeat
LRR_14 PF23598 196 - 278 2.4e-06 Leucine-rich repeat region
LRR_8 PF13855 202 - 263 5.4e-07 Leucine rich repeat
LRR_8 PF13855 319 - 376 8.6e-08 Leucine rich repeat
LRR_14 PF23598 329 - 395 1.2e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 878
AbsI CCTCGAGG 1 cut(s) 44
AccB1I GGYRCC 1 cut(s) 647
AccI GTMKAC 1 cut(s) 878
AccIII TCCGGA 2 cut(s) 425, 1265
AclWI GGATC 2 cut(s) 1235, 1313
AcoI YGGCCR 2 cut(s) 236, 301
AcsI RAATTY 5 cut(s) 38, 72, 316, 1180, 1363
AcuI CTGAAG 2 cut(s) 743, 1128
AcyI GRCGYC 1 cut(s) 875
AfiI CCNNNNNNNGG 1 cut(s) 1129
AgsI TTSAA 9 cut(s) 188, 202, 295, 483, 823, 1036, 1180, 1192, 1256
AluBI AGCT 8 cut(s) 213, 258, 513, 846, 1032, 1086, 1302, 1492
AluI AGCT 8 cut(s) 213, 258, 513, 846, 1032, 1086, 1302, 1492
Alw21I GWGCWC 1 cut(s) 524
Alw26I GTCTC 1 cut(s) 1444
AlwI GGATC 2 cut(s) 1235, 1313
Ama87I CYCGRG 1 cut(s) 44
Aor13HI TCCGGA 2 cut(s) 425, 1265
AoxI GGCC 4 cut(s) 236, 281, 301, 1205
ApeKI GCWGC 1 cut(s) 1299
ApoI RAATTY 5 cut(s) 38, 72, 316, 1180, 1363
ArsI GACNNNNNNTTYG 2 cut(s) 316, 348
AseI ATTAAT 1 cut(s) 53
Asp700I GAANNNNTTC 3 cut(s) 54, 419, 675
AspA2I CCTAGG 2 cut(s) 328, 437
AspS9I GGNCC 3 cut(s) 281, 1205, 1277
AsuHPI GGTGA 3 cut(s) 102, 1018, 1444
AvaI CYCGRG 1 cut(s) 44
AvaII GGWCC 1 cut(s) 1277
AvrII CCTAGG 2 cut(s) 328, 437
BalI TGGCCA 2 cut(s) 238, 303
BanI GGYRCC 1 cut(s) 647
Bbv12I GWGCWC 1 cut(s) 524
BbvI GCAGC 1 cut(s) 1311
BccI CCATC 4 cut(s) 541, 1131, 1222, 1252
BclI TGATCA 1 cut(s) 934
BcoDI GTCTC 1 cut(s) 1444
BfaI CTAG 5 cut(s) 329, 339, 438, 701, 1116
BisI GCNGC 1 cut(s) 1300
BlnI CCTAGG 2 cut(s) 328, 437
BlsI GCNGC 1 cut(s) 1301
Bme18I GGWCC 1 cut(s) 1277
BmeT110I CYCGRG 1 cut(s) 44
BmgT120I GGNCC 3 cut(s) 281, 1205, 1277
BmiI GGNNCC 4 cut(s) 649, 706, 796, 1279
BplI GAGNNNNNCTC 2 cut(s) 166, 198
BpuEI CTTGAG 3 cut(s) 394, 394, 602
BsaHI GRCGYC 1 cut(s) 875
BsaJI CCNNGG 2 cut(s) 328, 437
BsaWI WCCGGW 2 cut(s) 425, 1265
Bsc4I CCNNNNNNNGG 1 cut(s) 1129
Bse1I ACTGG 5 cut(s) 17, 145, 358, 454, 1465
Bse3DI GCAATG 1 cut(s) 1283
BseAI TCCGGA 2 cut(s) 425, 1265
BseDI CCNNGG 2 cut(s) 328, 437
BseGI GGATG 3 cut(s) 130, 867, 1244
BseLI CCNNNNNNNGG 1 cut(s) 1129
BseMI GCAATG 1 cut(s) 1283
BseMII CTCAG 1 cut(s) 40
BseNI ACTGG 5 cut(s) 17, 145, 358, 454, 1465
BseRI GAGGAG 1 cut(s) 742
BseXI GCAGC 1 cut(s) 1311
BsgI GTGCAG 1 cut(s) 600
BshFI GGCC 4 cut(s) 238, 283, 303, 1207
BshNI GGYRCC 1 cut(s) 647
BsiHKAI GWGCWC 1 cut(s) 524
BsiHKCI CYCGRG 1 cut(s) 44
BsiSI CCGG 3 cut(s) 426, 645, 1266
BslFI GGGAC 1 cut(s) 1294
BslI CCNNNNNNNGG 1 cut(s) 1129
BsmAI GTCTC 1 cut(s) 1444
BsmFI GGGAC 1 cut(s) 1294
BsnI GGCC 4 cut(s) 238, 283, 303, 1207
BsoBI CYCGRG 1 cut(s) 44
Bsp1286I GDGCHC 1 cut(s) 524
Bsp13I TCCGGA 2 cut(s) 425, 1265
Bsp143I GATC 6 cut(s) 403, 622, 745, 934, 1240, 1318
BspANI GGCC 4 cut(s) 238, 283, 303, 1207
BspCNI CTCAG 1 cut(s) 39
BspEI TCCGGA 2 cut(s) 425, 1265
BspLI GGNNCC 4 cut(s) 649, 706, 796, 1279
BspPI GGATC 2 cut(s) 1235, 1313
BspT107I GGYRCC 1 cut(s) 647
BsrDI GCAATG 1 cut(s) 1283
BsrI ACTGG 5 cut(s) 17, 145, 358, 454, 1465
BssECI CCNNGG 2 cut(s) 328, 437
BssMI GATC 6 cut(s) 403, 622, 745, 934, 1240, 1318
BssNI GRCGYC 1 cut(s) 875
BssT1I CCWWGG 2 cut(s) 328, 437
Bst6I CTCTTC 3 cut(s) 189, 762, 996
BstACI GRCGYC 1 cut(s) 875
BstC8I GCNNGC 2 cut(s) 848, 1381
BstDEI CTNAG 4 cut(s) 26, 165, 254, 1169
BstF5I GGATG 3 cut(s) 130, 867, 1244
BstKTI GATC 6 cut(s) 406, 625, 748, 937, 1243, 1321
BstMAI GTCTC 1 cut(s) 1444
BstMBI GATC 6 cut(s) 403, 622, 745, 934, 1240, 1318
BstMWI GCNNNNNNNGC 4 cut(s) 219, 519, 852, 1385
BstNSI RCATGY 2 cut(s) 810, 1457
BstV1I GCAGC 1 cut(s) 1311
BstXI CCANNNNNNTGG 2 cut(s) 120, 214
BsuRI GGCC 4 cut(s) 238, 283, 303, 1207
BtsCI GGATG 3 cut(s) 130, 867, 1244
BtsI GCAGTG 1 cut(s) 364
BtsIMutI CAGTG 2 cut(s) 24, 364
Cac8I GCNNGC 2 cut(s) 848, 1381
Cfr13I GGNCC 3 cut(s) 281, 1205, 1277
CviAII CATG 7 cut(s) 305, 517, 807, 938, 1150, 1446, 1454
DdeI CTNAG 4 cut(s) 26, 165, 254, 1169
DpnI GATC 6 cut(s) 405, 624, 747, 936, 1242, 1320
DpnII GATC 6 cut(s) 403, 622, 745, 934, 1240, 1318
EaeI YGGCCR 2 cut(s) 236, 301
Eam1104I CTCTTC 3 cut(s) 189, 762, 996
EarI CTCTTC 3 cut(s) 189, 762, 996
Eco130I CCWWGG 2 cut(s) 328, 437
Eco47I GGWCC 1 cut(s) 1277
Eco57I CTGAAG 2 cut(s) 743, 1128
Eco88I CYCGRG 1 cut(s) 44
EcoO109I RGGNCCY 1 cut(s) 281
EcoT14I CCWWGG 2 cut(s) 328, 437
ErhI CCWWGG 2 cut(s) 328, 437
FaeI CATG 7 cut(s) 308, 520, 810, 941, 1153, 1449, 1457
FalI AAGNNNNNCTT 4 cut(s) 1476, 1508, 1481, 1513
FaqI GGGAC 1 cut(s) 1294
FatI CATG 7 cut(s) 304, 516, 806, 937, 1149, 1445, 1453
FbaI TGATCA 1 cut(s) 934
FblI GTMKAC 1 cut(s) 878
Fnu4HI GCNGC 1 cut(s) 1300
FokI GGATG 3 cut(s) 137, 874, 1231
Fsp4HI GCNGC 1 cut(s) 1300
FspBI CTAG 5 cut(s) 329, 339, 438, 701, 1116
GluI GCNGC 1 cut(s) 1300
HaeIII GGCC 4 cut(s) 238, 283, 303, 1207
HapII CCGG 3 cut(s) 426, 645, 1266
Hin1I GRCGYC 1 cut(s) 875
Hin1II CATG 7 cut(s) 308, 520, 810, 941, 1153, 1449, 1457
HincII GTYRAC 1 cut(s) 879
HindII GTYRAC 1 cut(s) 879
HindIII AAGCTT 3 cut(s) 256, 1084, 1490
HinfI GANTC 4 cut(s) 66, 577, 584, 948
HpaII CCGG 3 cut(s) 426, 645, 1266
HphI GGTGA 3 cut(s) 102, 1018, 1444
Hpy166II GTNNAC 3 cut(s) 717, 879, 1277
Hpy188I TCNGA 7 cut(s) 29, 63, 71, 79, 627, 1082, 1147
Hpy188III TCNNGA 7 cut(s) 264, 401, 426, 581, 1266, 1322, 1472
Hpy8I GTNNAC 3 cut(s) 717, 879, 1277
Hpy99I CGWCG 1 cut(s) 880
HpyAV CCTTC 6 cut(s) 170, 378, 686, 1152, 1250, 1324
HpyCH4IV ACGT 2 cut(s) 875, 1307
HpyCH4V TGCA 8 cut(s) 457, 595, 603, 617, 806, 892, 1299, 1379
HpyF10VI GCNNNNNNNGC 4 cut(s) 219, 519, 852, 1385
HpyF3I CTNAG 4 cut(s) 26, 165, 254, 1169
HpySE526I ACGT 2 cut(s) 875, 1307
Hsp92I GRCGYC 1 cut(s) 875
Hsp92II CATG 7 cut(s) 308, 520, 810, 941, 1153, 1449, 1457
Kpn2I TCCGGA 2 cut(s) 425, 1265
Ksp22I TGATCA 1 cut(s) 934
Kzo9I GATC 6 cut(s) 403, 622, 745, 934, 1240, 1318
LmnI GCTCC 4 cut(s) 518, 527, 704, 800
Lsp1109I GCAGC 1 cut(s) 1311
MaeI CTAG 5 cut(s) 329, 339, 438, 701, 1116
MaeII ACGT 2 cut(s) 875, 1307
MaeIII GTNAC 2 cut(s) 244, 1118
MalI GATC 6 cut(s) 405, 624, 747, 936, 1242, 1320
MboI GATC 6 cut(s) 403, 622, 745, 934, 1240, 1318
MboII GAAGA 7 cut(s) 50, 176, 749, 1013, 1352, 1358, 1361
MhlI GDGCHC 1 cut(s) 524
MlsI TGGCCA 2 cut(s) 238, 303
MluNI TGGCCA 2 cut(s) 238, 303
MlyI GAGTC 3 cut(s) 75, 593, 942
Mox20I TGGCCA 2 cut(s) 238, 303
MroI TCCGGA 2 cut(s) 425, 1265
MroXI GAANNNNTTC 3 cut(s) 54, 419, 675
MscI TGGCCA 2 cut(s) 238, 303
MseI TTAA 5 cut(s) 53, 149, 554, 902, 1136
MslI CAYNNNNRTG 1 cut(s) 541
Msp20I TGGCCA 2 cut(s) 238, 303
MspI CCGG 3 cut(s) 426, 645, 1266
MwoI GCNNNNNNNGC 4 cut(s) 219, 519, 852, 1385
NdeII GATC 6 cut(s) 403, 622, 745, 934, 1240, 1318
NlaIII CATG 7 cut(s) 308, 520, 810, 941, 1153, 1449, 1457
NlaIV GGNNCC 4 cut(s) 649, 706, 796, 1279
NspI RCATGY 2 cut(s) 810, 1457
PaeR7I CTCGAG 1 cut(s) 44
PdmI GAANNNNTTC 3 cut(s) 54, 419, 675
PfeI GAWTC 1 cut(s) 577
PkrI GCNGC 1 cut(s) 1301
PleI GAGTC 3 cut(s) 74, 592, 942
PpsI GAGTC 3 cut(s) 74, 592, 942
PshBI ATTAAT 1 cut(s) 53
PspN4I GGNNCC 4 cut(s) 649, 706, 796, 1279
PspPI GGNCC 3 cut(s) 281, 1205, 1277
PspXI VCTCGAGB 1 cut(s) 44
RseI CAYNNNNRTG 1 cut(s) 541
SalI GTCGAC 1 cut(s) 877
SaqAI TTAA 5 cut(s) 53, 149, 554, 902, 1136
SatI GCNGC 1 cut(s) 1300
Sau3AI GATC 6 cut(s) 403, 622, 745, 934, 1240, 1318
Sau96I GGNCC 3 cut(s) 281, 1205, 1277
SchI GAGTC 3 cut(s) 75, 593, 942
SduI GDGCHC 1 cut(s) 524
Sfr274I CTCGAG 1 cut(s) 44
SinI GGWCC 1 cut(s) 1277
SlaI CTCGAG 1 cut(s) 44
SmiMI CAYNNNNRTG 1 cut(s) 541
SmlI CTYRAG 4 cut(s) 44, 373, 409, 581
SmoI CTYRAG 4 cut(s) 44, 373, 409, 581
SspI AATATT 2 cut(s) 433, 727
SspMI CTAG 5 cut(s) 329, 339, 438, 701, 1116
StyI CCWWGG 2 cut(s) 328, 437
TaiI ACGT 2 cut(s) 878, 1310
TaqI TCGA 2 cut(s) 45, 878
TfiI GAWTC 1 cut(s) 577
Tru1I TTAA 5 cut(s) 53, 149, 554, 902, 1136
Tru9I TTAA 5 cut(s) 53, 149, 554, 902, 1136
TscAI CASTG 2 cut(s) 24, 364
TseI GCWGC 1 cut(s) 1299
TspDTI ATGAA 7 cut(s) 398, 668, 881, 939, 1359, 1387, 1496
TspGWI ACGGA 1 cut(s) 181
TspRI CASTG 2 cut(s) 24, 364
VpaK11BI GGWCC 1 cut(s) 1277
VspI ATTAAT 1 cut(s) 53
XapI RAATTY 5 cut(s) 38, 72, 316, 1180, 1363
XceI RCATGY 2 cut(s) 810, 1457
XcmI CCANNNNNNNNNTGG 1 cut(s) 540
XhoI CTCGAG 1 cut(s) 44
XmaJI CCTAGG 2 cut(s) 328, 437
XmiI GTMKAC 1 cut(s) 878
XmnI GAANNNNTTC 3 cut(s) 54, 419, 675
XspI CTAG 5 cut(s) 329, 339, 438, 701, 1116
ZraI GACGTC 1 cut(s) 876
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.