FvH4_6g05620

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000095
Physical Location & Seq
Reverse (-)
3208384 .. 3209923
1540 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g05620.t1

Sequence Viewer

Length: 1113 bp
ATGTACAAATTAAACTTGGTGGTGGTGGACAGAATCAGTGCATTGCCAGATGATCTTATAGTTAGTATAGTGTCTCTGCTGCCTCTAAAGGAAGCAGCAGCTACTAGTGTGCTTTCAACTCGATGGCGCCATATCTGGACCTTCGTTACCACCCTCGATTTTCACCATGACATTCTTTTCCAACTGCGTTCATACAAACGAGTAAGAATAGAGTCGGAACTTGATAGGTACTTGAATTGGGTGAACAGTGTCATGAAACAACATAGAGGCCCAACTACGCTTAGGGTTTATGCCGATTTAAATGATCCCAAGTATGAAAGTTTCATTCATACATGGGGTCGATTCGTATCGGAAAAGAGAGTCCAAAACTTTGAGTCGCTCATTTCGAAGAACAGAGGTTTCCCCAAAACAGGAGGAAACAAGATTAAGGCTCTCTTTAGTGCTTTTCCCGATTCAGACCAACTTGTAGATGTGGACAGATCAGGGTCGACTGACTTGTGCCCTAAACCTGTTATTCTGCAGTACCCTCGTTTATACACTTTTTTTAGTGCATTCAGTTGCTTGAAGCACCTTAGAGCTCCAGAATTCAAGTCTTTTAAAGGACTTACTGGACAAGTTCTGGAGTGCTTCTTGTCTCATTGCCCACTTCTTGAGCAATTAAAAGTGCTTCGCGTTTTCAGGTTGGATAGTTTTAAAGTTATCCTGGCAATCGCCTTGAAATACTTACACATCCAGAAACATAACATACCGCTTGTTGAGGTCTCCATTTCTTCCCGCCAAGTTTCATTTGGACAGTGTGACTTTCATCATCAGCTAGAGGTTTTCAGACTGAGGGGATTAGTGCTAAACAATGAGAAACATGTATTAGTATTACCTACATATGTGAATCTCAAGCATTTGGAACTGGGATTGATGGAACGTGACAGTTGCTGTCTTCTTCAATTAAGGGCTTTCATGAAGGCATGTCCTTATTTGCACAAACTTGTATTGAAGTTTAGTGCATTTGGTATCCATCATGTTCGAGAGTGGTATTCTCCTGAGCGGATGTTGAAGAAGTATGGTGGCCCAGATACGGAGGAGGAAAGAGAACAAGCTACAGATAGAGCGGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

371

Amino Acids

42.99

Weight (kDa)

9.33

Isoelectric Point (pI)

40.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 12 - 47 7.1e-07 F-box domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 126
AccBSI CCGCTC 2 cut(s) 1042, 1106
AccI GTMKAC 1 cut(s) 488
AccII CGCG 1 cut(s) 672
AciI CCGC 4 cut(s) 749, 775, 1042, 1106
AclWI GGATC 1 cut(s) 299
AcsI RAATTY 1 cut(s) 584
AcyI GRCGYC 1 cut(s) 127
AfaI GTAC 3 cut(s) 5, 230, 524
AfiI CCNNNNNNNGG 2 cut(s) 410, 1072
AflIII ACRYGT 1 cut(s) 859
AgsI TTSAA 8 cut(s) 117, 235, 565, 589, 718, 941, 991, 1051
AhlI ACTAGT 1 cut(s) 104
AjnI CCWGG 1 cut(s) 702
AluBI AGCT 4 cut(s) 101, 578, 814, 1094
AluI AGCT 4 cut(s) 101, 578, 814, 1094
Alw21I GWGCWC 1 cut(s) 580
Alw26I GTCTC 3 cut(s) 78, 639, 766
AlwI GGATC 1 cut(s) 299
AlwNI CAGNNNCTG 1 cut(s) 930
AoxI GGCC 2 cut(s) 268, 1063
ApeKI GCWGC 3 cut(s) 79, 95, 98
ApoI RAATTY 1 cut(s) 584
AspLEI GCGC 1 cut(s) 129
AspS9I GGNCC 3 cut(s) 138, 269, 1064
AsuHPI GGTGA 2 cut(s) 155, 253
AsuII TTCGAA 1 cut(s) 386
AvaII GGWCC 1 cut(s) 138
BaeGI GKGCMC 1 cut(s) 503
BanI GGYRCC 1 cut(s) 126
BanII GRGCYC 1 cut(s) 580
BbsI GAAGAC 1 cut(s) 926
Bbv12I GWGCWC 1 cut(s) 580
BbvI GCAGC 3 cut(s) 66, 107, 110
BccI CCATC 3 cut(s) 117, 907, 1020
BcgI CGANNNNNNTGC 2 cut(s) 509, 543
BciT130I CCWGG 1 cut(s) 704
BciVI GTATCC 1 cut(s) 1019
BcoDI GTCTC 3 cut(s) 78, 639, 766
BcuI ACTAGT 1 cut(s) 104
BfaI CTAG 2 cut(s) 105, 815
BfmI CTRYAG 2 cut(s) 518, 1095
BfoI RGCGCY 1 cut(s) 130
BfuI GTATCC 1 cut(s) 1019
BisI GCNGC 4 cut(s) 80, 96, 99, 1107
BlsI GCNGC 4 cut(s) 81, 97, 100, 1108
Bme1390I CCNGG 1 cut(s) 704
Bme18I GGWCC 1 cut(s) 138
BmgT120I GGNCC 3 cut(s) 138, 269, 1064
BmiI GGNNCC 1 cut(s) 128
BmrFI CCNGG 1 cut(s) 704
BmrI ACTGGG 1 cut(s) 914
BmuI ACTGGG 1 cut(s) 914
BpiI GAAGAC 1 cut(s) 926
BpmI CTGGAG 2 cut(s) 564, 641
Bpu10I CCTNAGC 2 cut(s) 281, 1038
Bpu14I TTCGAA 1 cut(s) 386
BpuEI CTTGAG 2 cut(s) 671, 875
BsaBI GATNNNNATC 1 cut(s) 346
BsaHI GRCGYC 1 cut(s) 127
BsaI GGTCTC 1 cut(s) 766
Bsc4I CCNNNNNNNGG 2 cut(s) 410, 1072
Bse1I ACTGG 2 cut(s) 613, 909
Bse3DI GCAATG 2 cut(s) 41, 637
Bse8I GATNNNNATC 1 cut(s) 346
BseBI CCWGG 1 cut(s) 704
BseGI GGATG 2 cut(s) 729, 1050
BseJI GATNNNNATC 1 cut(s) 346
BseLI CCNNNNNNNGG 2 cut(s) 410, 1072
BseMI GCAATG 2 cut(s) 41, 637
BseMII CTCAG 2 cut(s) 821, 1029
BseNI ACTGG 2 cut(s) 613, 909
BseRI GAGGAG 1 cut(s) 1091
BseSI GKGCMC 1 cut(s) 503
BseXI GCAGC 3 cut(s) 66, 107, 110
Bsh1236I CGCG 1 cut(s) 672
BshFI GGCC 2 cut(s) 270, 1065
BshNI GGYRCC 1 cut(s) 126
BsiHKAI GWGCWC 1 cut(s) 580
BslI CCNNNNNNNGG 2 cut(s) 410, 1072
BsmAI GTCTC 3 cut(s) 78, 639, 766
BsmI GAATGC 1 cut(s) 551
BsnI GGCC 2 cut(s) 270, 1065
Bso31I GGTCTC 1 cut(s) 766
Bsp119I TTCGAA 1 cut(s) 386
Bsp1286I GDGCHC 2 cut(s) 503, 580
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 3 cut(s) 52, 304, 479
BspACI CCGC 4 cut(s) 749, 775, 1042, 1106
BspANI GGCC 2 cut(s) 270, 1065
BspCNI CTCAG 2 cut(s) 822, 1030
BspFNI CGCG 1 cut(s) 672
BspHI TCATGA 2 cut(s) 252, 954
BspLI GGNNCC 1 cut(s) 128
BspMAI CTGCAG 1 cut(s) 522
BspPI GGATC 1 cut(s) 299
BspT104I TTCGAA 1 cut(s) 386
BspT107I GGYRCC 1 cut(s) 126
BspTNI GGTCTC 1 cut(s) 766
BsrBI CCGCTC 2 cut(s) 1042, 1106
BsrDI GCAATG 2 cut(s) 41, 637
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 2 cut(s) 613, 909
BssMI GATC 3 cut(s) 52, 304, 479
BssNI GRCGYC 1 cut(s) 127
Bst2UI CCWGG 1 cut(s) 704
Bst4CI ACNGT 3 cut(s) 248, 795, 926
BstACI GRCGYC 1 cut(s) 127
BstAUI TGTACA 1 cut(s) 3
BstBI TTCGAA 1 cut(s) 386
BstDEI CTNAG 4 cut(s) 281, 572, 830, 1038
BstF5I GGATG 2 cut(s) 729, 1050
BstFNI CGCG 1 cut(s) 672
BstH2I RGCGCY 1 cut(s) 130
BstHHI GCGC 1 cut(s) 129
BstKTI GATC 3 cut(s) 55, 307, 482
BstMAI GTCTC 3 cut(s) 78, 639, 766
BstMBI GATC 3 cut(s) 52, 304, 479
BstNI CCWGG 1 cut(s) 704
BstNSI RCATGY 2 cut(s) 863, 966
BstSCI CCNGG 1 cut(s) 702
BstSFI CTRYAG 2 cut(s) 518, 1095
BstSLI GKGCMC 1 cut(s) 503
BstUI CGCG 1 cut(s) 672
BstV1I GCAGC 3 cut(s) 66, 107, 110
BstV2I GAAGAC 1 cut(s) 926
BsuI GTATCC 1 cut(s) 1019
BsuRI GGCC 2 cut(s) 270, 1065
BtsCI GGATG 2 cut(s) 729, 1050
BtsIMutI CAGTG 3 cut(s) 43, 253, 800
CaiI CAGNNNCTG 1 cut(s) 930
CciI TCATGA 2 cut(s) 252, 954
CfoI GCGC 1 cut(s) 129
Cfr13I GGNCC 3 cut(s) 138, 269, 1064
Csp6I GTAC 3 cut(s) 4, 229, 523
CviAII CATG 7 cut(s) 167, 253, 333, 860, 955, 963, 1016
CviJI RGCY 9 cut(s) 101, 270, 431, 578, 814, 950, 1065, 1094, 1109
CviKI_1 RGCY 9 cut(s) 101, 270, 431, 578, 814, 950, 1065, 1094, 1109
CviQI GTAC 3 cut(s) 4, 229, 523
DdeI CTNAG 4 cut(s) 281, 572, 830, 1038
DinI GGCGCC 1 cut(s) 128
DpnI GATC 3 cut(s) 54, 306, 481
DpnII GATC 3 cut(s) 52, 304, 479
DraI TTTAAA 3 cut(s) 300, 598, 694
Ecl136II GAGCTC 1 cut(s) 578
Eco24I GRGCYC 1 cut(s) 580
Eco31I GGTCTC 1 cut(s) 766
Eco47I GGWCC 1 cut(s) 138
Eco53kI GAGCTC 1 cut(s) 578
EcoICRI GAGCTC 1 cut(s) 578
EcoRI GAATTC 1 cut(s) 584
EcoRII CCWGG 1 cut(s) 702
EcoT38I GRGCYC 1 cut(s) 580
EgeI GGCGCC 1 cut(s) 128
EheI GGCGCC 1 cut(s) 128
FaeI CATG 7 cut(s) 170, 256, 336, 863, 958, 966, 1019
FalI AAGNNNNNCTT 2 cut(s) 419, 451
FatI CATG 7 cut(s) 166, 252, 332, 859, 954, 962, 1015
FauI CCCGC 1 cut(s) 782
FauNDI CATATG 1 cut(s) 880
FblI GTMKAC 1 cut(s) 488
Fnu4HI GCNGC 4 cut(s) 80, 96, 99, 1107
FokI GGATG 2 cut(s) 716, 1057
FriOI GRGCYC 1 cut(s) 580
Fsp4HI GCNGC 4 cut(s) 80, 96, 99, 1107
FspBI CTAG 2 cut(s) 105, 815
GlaI GCGC 1 cut(s) 128
GluI GCNGC 4 cut(s) 80, 96, 99, 1107
GsuI CTGGAG 2 cut(s) 564, 641
HaeII RGCGCY 1 cut(s) 130
HaeIII GGCC 2 cut(s) 270, 1065
HhaI GCGC 1 cut(s) 129
Hin1I GRCGYC 1 cut(s) 127
Hin1II CATG 7 cut(s) 170, 256, 336, 863, 958, 966, 1019
Hin6I GCGC 1 cut(s) 127
HinP1I GCGC 1 cut(s) 127
HincII GTYRAC 1 cut(s) 489
HindII GTYRAC 1 cut(s) 489
HinfI GANTC 7 cut(s) 33, 212, 342, 360, 374, 452, 886
HphI GGTGA 2 cut(s) 155, 253
Hpy166II GTNNAC 4 cut(s) 28, 244, 475, 489
Hpy188I TCNGA 4 cut(s) 217, 352, 457, 827
Hpy8I GTNNAC 4 cut(s) 28, 244, 475, 489
HpyAV CCTTC 2 cut(s) 151, 952
HpyCH4III ACNGT 3 cut(s) 248, 795, 926
HpyCH4IV ACGT 1 cut(s) 919
HpyCH4V TGCA 5 cut(s) 41, 520, 551, 976, 1001
HpyF3I CTNAG 4 cut(s) 281, 572, 830, 1038
HpySE526I ACGT 1 cut(s) 919
Hsp92I GRCGYC 1 cut(s) 127
Hsp92II CATG 7 cut(s) 170, 256, 336, 863, 958, 966, 1019
HspAI GCGC 1 cut(s) 127
KasI GGCGCC 1 cut(s) 126
Kzo9I GATC 3 cut(s) 52, 304, 479
LmnI GCTCC 1 cut(s) 583
Lsp1109I GCAGC 3 cut(s) 66, 107, 110
MaeI CTAG 2 cut(s) 105, 815
MaeII ACGT 1 cut(s) 919
MaeIII GTNAC 3 cut(s) 145, 797, 920
MalI GATC 3 cut(s) 54, 306, 481
MbiI CCGCTC 2 cut(s) 1042, 1106
MboI GATC 3 cut(s) 52, 304, 479
MboII GAAGA 5 cut(s) 400, 762, 926, 929, 1063
MhlI GDGCHC 2 cut(s) 503, 580
MluCI AATT 5 cut(s) 8, 235, 584, 656, 941
Mly113I GGCGCC 1 cut(s) 127
MlyI GAGTC 3 cut(s) 221, 369, 383
MmeI TCCRAC 3 cut(s) 195, 205, 663
MseI TTAA 8 cut(s) 11, 299, 426, 597, 659, 693, 944, 1111
MspR9I CCNGG 1 cut(s) 704
Mva1269I GAATGC 1 cut(s) 551
MvaI CCWGG 1 cut(s) 704
MvnI CGCG 1 cut(s) 672
NarI GGCGCC 1 cut(s) 127
NdeI CATATG 1 cut(s) 880
NdeII GATC 3 cut(s) 52, 304, 479
NlaIII CATG 7 cut(s) 170, 256, 336, 863, 958, 966, 1019
NlaIV GGNNCC 1 cut(s) 128
NmuCI GTSAC 2 cut(s) 797, 920
NspI RCATGY 2 cut(s) 863, 966
NspV TTCGAA 1 cut(s) 386
PagI TCATGA 2 cut(s) 252, 954
PciI ACATGT 1 cut(s) 859
PcsI WCGNNNNNNNCGW 1 cut(s) 383
PctI GAATGC 1 cut(s) 551
PfeI GAWTC 4 cut(s) 33, 342, 452, 886
PkrI GCNGC 4 cut(s) 81, 97, 100, 1108
PleI GAGTC 3 cut(s) 220, 368, 382
PluTI GGCGCC 1 cut(s) 130
PpsI GAGTC 3 cut(s) 220, 368, 382
PscI ACATGT 1 cut(s) 859
Psp124BI GAGCTC 1 cut(s) 580
Psp6I CCWGG 1 cut(s) 702
PspGI CCWGG 1 cut(s) 702
PspN4I GGNNCC 1 cut(s) 128
PspPI GGNCC 3 cut(s) 138, 269, 1064
PstI CTGCAG 1 cut(s) 522
PstNI CAGNNNCTG 1 cut(s) 930
RsaI GTAC 3 cut(s) 5, 230, 524
RsaNI GTAC 3 cut(s) 4, 229, 523
SacI GAGCTC 1 cut(s) 580
SalI GTCGAC 1 cut(s) 487
SaqAI TTAA 8 cut(s) 11, 299, 426, 597, 659, 693, 944, 1111
SatI GCNGC 4 cut(s) 80, 96, 99, 1107
Sau3AI GATC 3 cut(s) 52, 304, 479
Sau96I GGNCC 3 cut(s) 138, 269, 1064
SchI GAGTC 3 cut(s) 221, 369, 383
ScrFI CCNGG 1 cut(s) 704
SduI GDGCHC 2 cut(s) 503, 580
SfcI CTRYAG 2 cut(s) 518, 1095
SfoI GGCGCC 1 cut(s) 128
SfuI TTCGAA 1 cut(s) 386
SinI GGWCC 1 cut(s) 138
SmiI ATTTAAAT 1 cut(s) 300
SmlI CTYRAG 2 cut(s) 650, 890
SmoI CTYRAG 2 cut(s) 650, 890
SpeI ACTAGT 1 cut(s) 104
Sse9I AATT 5 cut(s) 8, 235, 584, 656, 941
SsiI CCGC 4 cut(s) 749, 775, 1042, 1106
SspDI GGCGCC 1 cut(s) 126
SspMI CTAG 2 cut(s) 105, 815
SstI GAGCTC 1 cut(s) 580
StyD4I CCNGG 1 cut(s) 702
SwaI ATTTAAAT 1 cut(s) 300
TaaI ACNGT 3 cut(s) 248, 795, 926
TaiI ACGT 1 cut(s) 922
TaqI TCGA 6 cut(s) 121, 156, 340, 386, 488, 1021
TasI AATT 5 cut(s) 8, 235, 584, 656, 941
TatI WGTACW 1 cut(s) 3
TauI GCSGC 1 cut(s) 1109
TfiI GAWTC 4 cut(s) 33, 342, 452, 886
Tru1I TTAA 8 cut(s) 11, 299, 426, 597, 659, 693, 944, 1111
Tru9I TTAA 8 cut(s) 11, 299, 426, 597, 659, 693, 944, 1111
TscAI CASTG 3 cut(s) 43, 253, 800
TseFI GTSAC 2 cut(s) 797, 920
TseI GCWGC 3 cut(s) 79, 95, 98
Tsp45I GTSAC 2 cut(s) 797, 920
TspDTI ATGAA 9 cut(s) 180, 269, 313, 317, 330, 774, 794, 943, 971
TspGWI ACGGA 1 cut(s) 1088
TspRI CASTG 3 cut(s) 43, 253, 800
VpaK11BI GGWCC 1 cut(s) 138
XapI RAATTY 1 cut(s) 584
XceI RCATGY 2 cut(s) 863, 966
XcmI CCANNNNNNNNNTGG 1 cut(s) 785
XmiI GTMKAC 1 cut(s) 488
XspI CTAG 2 cut(s) 105, 815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.