Rh3CG267700

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0000095
Physical Location & Seq
Forward (+)
26333774 .. 26337286
3513 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG267700.1

Sequence Viewer

Length: 1218 bp
ATGACTCTCAACTTTGATGCTGAGAAGCATTTGTCCAATTTTGCATCCCGGGAAGAGTTAGCAATTCGTTGGTATGTCGATTGGGTGGATACAGTGTTGAACCAGTATACAGGCCGAAAAATGAAGCAGTTCAGGGTTTGTTATGATTTGGACAGCACGTTTTCAAGGTCTATTGATGAATGGATTCATGTTGCAATGACAAAGGGAGTTGAAATGCTTGAGTTAGACTTATTAGAATATGGTGTTACTCGCCGTTTGGAGTATCCAATTTATACATTTCCCCACAGACTTTTAGGCATTGTGAAAGAATCTGCTTGGAAGCACATCTGTTTTGATGTTCCTAGGCTAAGTCCTTGTGCATGCATTGGCTTTAAGTCCCTCAAAGTTCTTAGTTTGAAATGTGTTGATGTGGATGGACAAGTTCTTGAGTACATGTTTTCTAATTGTCCAGTTCTTGAACGATTATCACTAGGTTATTCCTCGAGCTTGGTTAGTCTAAGAGTTGTTGGTCCATCAATTGCATTGAAGTACTTAGAAATACGAGGATGTGCTAGACTTGAGAGCATTGAGATCTGTGACACAAACCTTGTTTCTTTTATTTATTACGGAAATGAGATACACTTGATAGTTAGAAATGTTCCTCTCCTTGTTGAGGTATCAATTTTTGAGTCTTGTAGTAATGATTACATACAGGTTGCGTTCACCCAACTCTCATGCTGTCTCTCTCAACTAGAGATTCTCAAACTAATTGATGTCATACTGCCCTACAAGAGGAATCCTGTATTTCCTATATTCACAAATCTCAAGCATTTGGAATTAAGATTTTATGAAGGTGATGATTGCATTCTTCTTCAGTTAACTTCTTTCATCAAGGCATCCCCTTGCTTGCACAACCTTGTGCTGGAGTTGTACCCTTTAACATGCCGAAGAGAAATAGAATTTAGAAAAGCTGCCAAATGCTCCCATGATTACCTAAAGGTGGTGGAAATATTTGGATATCATGGACACAAAAGTGATTGTGAACTGGTCAAGTTCTTGACAGAGATTGCTGTTAATTTGGAGAAAATTGTTACTGATCCTGCTCATCCTGCTGAACGACATTACTGTTATCCTAAACACAGAAGAAAGCCGGATATTGAAGTCGTGGCGAGGGATGAACAGTCAAGTTATGATTATGCTACCATAGTAAAGAAAAAATTCCTTCGACTTGGGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

405

Amino Acids

46.96

Weight (kDa)

6.67

Isoelectric Point (pI)

45.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 35 - 368 2.2e-42 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 58 - 194 4.3e-12 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 107
AclWI GGATC 1 cut(s) 1070
AcsI RAATTY 2 cut(s) 938, 1196
AcuI CTGAAG 1 cut(s) 836
AfaI GTAC 3 cut(s) 431, 530, 911
AfiI CCNNNNNNNGG 4 cut(s) 652, 771, 901, 979
AflIII ACRYGT 1 cut(s) 432
AgsI TTSAA 7 cut(s) 100, 165, 212, 397, 458, 526, 1139
AleI CACNNNNGTG 1 cut(s) 1011
AluBI AGCT 2 cut(s) 486, 950
AluI AGCT 2 cut(s) 486, 950
Alw26I GTCTC 1 cut(s) 725
AlwI GGATC 1 cut(s) 1070
Ama87I CYCGRG 2 cut(s) 48, 481
AoxI GGCC 1 cut(s) 112
ApeKI GCWGC 1 cut(s) 950
ApoI RAATTY 2 cut(s) 938, 1196
Asp700I GAANNNNTTC 3 cut(s) 128, 183, 1196
AspA2I CCTAGG 1 cut(s) 341
AspS9I GGNCC 1 cut(s) 509
AsuC2I CCSGG 2 cut(s) 49, 50
AsuHPI GGTGA 2 cut(s) 694, 845
AvaI CYCGRG 2 cut(s) 48, 481
AvaII GGWCC 1 cut(s) 509
AvrII CCTAGG 1 cut(s) 341
BbvI GCAGC 1 cut(s) 937
BccI CCATC 2 cut(s) 407, 520
BceAI ACGGC 1 cut(s) 237
BciVI GTATCC 2 cut(s) 82, 273
BcnI CCSGG 2 cut(s) 49, 50
BcoDI GTCTC 1 cut(s) 725
BfaI CTAG 4 cut(s) 342, 470, 552, 731
BfuI GTATCC 2 cut(s) 82, 273
BglII AGATCT 1 cut(s) 570
BisI GCNGC 1 cut(s) 951
BlnI CCTAGG 1 cut(s) 341
BlsI GCNGC 1 cut(s) 952
BmcAI AGTACT 1 cut(s) 530
Bme1390I CCNGG 2 cut(s) 49, 50
Bme18I GGWCC 1 cut(s) 509
BmeT110I CYCGRG 2 cut(s) 48, 481
BmgT120I GGNCC 1 cut(s) 509
BmrFI CCNGG 2 cut(s) 49, 50
BmsI GCATC 3 cut(s) 7, 53, 884
BpmI CTGGAG 1 cut(s) 923
BpuEI CTTGAG 4 cut(s) 239, 446, 578, 788
BpuMI CCSGG 2 cut(s) 49, 50
BsaJI CCNNGG 2 cut(s) 48, 341
Bsc4I CCNNNNNNNGG 4 cut(s) 652, 771, 901, 979
Bse1I ACTGG 3 cut(s) 103, 449, 1029
Bse3DI GCAATG 1 cut(s) 201
BseDI CCNNGG 2 cut(s) 48, 341
BseGI GGATG 6 cut(s) 44, 418, 551, 875, 1084, 1159
BseLI CCNNNNNNNGG 4 cut(s) 652, 771, 901, 979
BseMI GCAATG 1 cut(s) 201
BseMII CTCAG 1 cut(s) 12
BseNI ACTGG 3 cut(s) 103, 449, 1029
BseXI GCAGC 1 cut(s) 937
BshFI GGCC 1 cut(s) 114
BsiHKCI CYCGRG 2 cut(s) 48, 481
BsiSI CCGG 2 cut(s) 49, 1130
BslFI GGGAC 1 cut(s) 361
BslI CCNNNNNNNGG 4 cut(s) 652, 771, 901, 979
BsmAI GTCTC 1 cut(s) 725
BsmFI GGGAC 1 cut(s) 361
BsmI GAATGC 1 cut(s) 843
BsnI GGCC 1 cut(s) 114
BsoBI CYCGRG 2 cut(s) 48, 481
Bsp143I GATC 2 cut(s) 570, 1075
BspANI GGCC 1 cut(s) 114
BspCNI CTCAG 1 cut(s) 13
BspPI GGATC 1 cut(s) 1070
BsrDI GCAATG 1 cut(s) 201
BsrI ACTGG 3 cut(s) 103, 449, 1029
BssECI CCNNGG 2 cut(s) 48, 341
BssMI GATC 2 cut(s) 570, 1075
BssNAI GTATAC 1 cut(s) 108
BssT1I CCWWGG 1 cut(s) 341
Bst1107I GTATAC 1 cut(s) 108
Bst4CI ACNGT 3 cut(s) 94, 1106, 1161
Bst6I CTCTTC 2 cut(s) 48, 922
BstC8I GCNNGC 2 cut(s) 361, 887
BstDEI CTNAG 5 cut(s) 21, 347, 389, 497, 532
BstENI CCTNNNNNAGG 2 cut(s) 650, 769
BstF5I GGATG 6 cut(s) 44, 418, 551, 875, 1084, 1159
BstKTI GATC 2 cut(s) 573, 1078
BstMAI GTCTC 1 cut(s) 725
BstMBI GATC 2 cut(s) 570, 1075
BstMWI GCNNNNNNNGC 1 cut(s) 1088
BstNSI RCATGY 3 cut(s) 363, 436, 924
BstSCI CCNGG 2 cut(s) 47, 48
BstV1I GCAGC 1 cut(s) 937
BstX2I RGATCY 1 cut(s) 570
BstYI RGATCY 1 cut(s) 570
BstZ17I GTATAC 1 cut(s) 108
BsuI GTATCC 2 cut(s) 82, 273
BsuRI GGCC 1 cut(s) 114
BtsCI GGATG 6 cut(s) 44, 418, 551, 875, 1084, 1159
BtsIMutI CAGTG 1 cut(s) 99
Cac8I GCNNGC 2 cut(s) 361, 887
Cfr13I GGNCC 1 cut(s) 509
Cfr9I CCCGGG 1 cut(s) 48
Csp6I GTAC 3 cut(s) 430, 529, 910
CviAII CATG 7 cut(s) 188, 360, 433, 714, 921, 965, 1001
CviJI RGCY 6 cut(s) 114, 346, 369, 486, 950, 1129
CviKI_1 RGCY 6 cut(s) 114, 346, 369, 486, 950, 1129
CviQI GTAC 3 cut(s) 430, 529, 910
DdeI CTNAG 5 cut(s) 21, 347, 389, 497, 532
DpnI GATC 2 cut(s) 572, 1077
DpnII GATC 2 cut(s) 570, 1075
Eam1104I CTCTTC 2 cut(s) 48, 922
EarI CTCTTC 2 cut(s) 48, 922
Eco130I CCWWGG 1 cut(s) 341
Eco32I GATATC 1 cut(s) 998
Eco47I GGWCC 1 cut(s) 509
Eco57I CTGAAG 1 cut(s) 836
Eco88I CYCGRG 2 cut(s) 48, 481
EcoNI CCTNNNNNAGG 2 cut(s) 650, 769
EcoRV GATATC 1 cut(s) 998
EcoT14I CCWWGG 1 cut(s) 341
EcoT22I ATGCAT 1 cut(s) 365
ErhI CCWWGG 1 cut(s) 341
FaeI CATG 7 cut(s) 191, 363, 436, 717, 924, 968, 1004
FaqI GGGAC 1 cut(s) 361
FatI CATG 7 cut(s) 187, 359, 432, 713, 920, 964, 1000
FblI GTMKAC 1 cut(s) 107
Fnu4HI GCNGC 1 cut(s) 951
FokI GGATG 6 cut(s) 31, 425, 558, 862, 1071, 1166
Fsp4HI GCNGC 1 cut(s) 951
FspBI CTAG 4 cut(s) 342, 470, 552, 731
GluI GCNGC 1 cut(s) 951
GsuI CTGGAG 1 cut(s) 923
HaeIII GGCC 1 cut(s) 114
HapII CCGG 2 cut(s) 49, 1130
Hin1II CATG 7 cut(s) 191, 363, 436, 717, 924, 968, 1004
HincII GTYRAC 1 cut(s) 858
HindII GTYRAC 1 cut(s) 858
HinfI GANTC 6 cut(s) 4, 184, 308, 668, 736, 775
HpaI GTTAAC 1 cut(s) 858
HpaII CCGG 2 cut(s) 49, 1130
HphI GGTGA 2 cut(s) 694, 845
Hpy166II GTNNAC 4 cut(s) 108, 702, 858, 1022
Hpy188III TCNNGA 3 cut(s) 425, 455, 1036
Hpy8I GTNNAC 4 cut(s) 108, 702, 858, 1022
HpyAV CCTTC 2 cut(s) 824, 1211
HpyCH4III ACNGT 3 cut(s) 94, 1106, 1161
HpyCH4IV ACGT 1 cut(s) 158
HpyCH4V TGCA 7 cut(s) 44, 194, 359, 363, 521, 843, 889
HpyF10VI GCNNNNNNNGC 1 cut(s) 1088
HpyF3I CTNAG 5 cut(s) 21, 347, 389, 497, 532
HpySE526I ACGT 1 cut(s) 158
Hsp92II CATG 7 cut(s) 191, 363, 436, 717, 924, 968, 1004
KspAI GTTAAC 1 cut(s) 858
Kzo9I GATC 2 cut(s) 570, 1075
LmnI GCTCC 1 cut(s) 965
Lsp1109I GCAGC 1 cut(s) 937
LweI GCATC 3 cut(s) 7, 53, 884
MaeI CTAG 4 cut(s) 342, 470, 552, 731
MaeII ACGT 1 cut(s) 158
MaeIII GTNAC 3 cut(s) 244, 575, 1069
MalI GATC 2 cut(s) 572, 1077
MboI GATC 2 cut(s) 570, 1075
MboII GAAGA 5 cut(s) 65, 839, 842, 939, 1134
MfeI CAATTG 1 cut(s) 516
MflI RGATCY 1 cut(s) 570
MlyI GAGTC 1 cut(s) 677
MnlI CCTC 7 cut(s) 389, 490, 536, 646, 651, 765, 1143
Mph1103I ATGCAT 1 cut(s) 365
MroXI GAANNNNTTC 3 cut(s) 128, 183, 1196
MseI TTAA 5 cut(s) 372, 818, 857, 917, 1053
MslI CAYNNNNRTG 1 cut(s) 1011
MspI CCGG 2 cut(s) 49, 1130
MspR9I CCNGG 2 cut(s) 49, 50
MunI CAATTG 1 cut(s) 516
Mva1269I GAATGC 1 cut(s) 843
MwoI GCNNNNNNNGC 1 cut(s) 1088
NciI CCSGG 2 cut(s) 49, 50
NdeII GATC 2 cut(s) 570, 1075
NlaIII CATG 7 cut(s) 191, 363, 436, 717, 924, 968, 1004
NmuCI GTSAC 1 cut(s) 575
NsiI ATGCAT 1 cut(s) 365
NspI RCATGY 3 cut(s) 363, 436, 924
OliI CACNNNNGTG 1 cut(s) 1011
PaeI GCATGC 1 cut(s) 363
PaeR7I CTCGAG 1 cut(s) 481
PciI ACATGT 1 cut(s) 432
PctI GAATGC 1 cut(s) 843
PdmI GAANNNNTTC 3 cut(s) 128, 183, 1196
PfeI GAWTC 4 cut(s) 184, 308, 736, 775
PkrI GCNGC 1 cut(s) 952
PleI GAGTC 1 cut(s) 676
PpsI GAGTC 1 cut(s) 676
PscI ACATGT 1 cut(s) 432
PspPI GGNCC 1 cut(s) 509
PspXI VCTCGAGB 1 cut(s) 481
PsuI RGATCY 1 cut(s) 570
RsaI GTAC 3 cut(s) 431, 530, 911
RsaNI GTAC 3 cut(s) 430, 529, 910
RseI CAYNNNNRTG 1 cut(s) 1011
SaqAI TTAA 5 cut(s) 372, 818, 857, 917, 1053
SatI GCNGC 1 cut(s) 951
Sau3AI GATC 2 cut(s) 570, 1075
Sau96I GGNCC 1 cut(s) 509
ScaI AGTACT 1 cut(s) 530
SchI GAGTC 1 cut(s) 677
ScrFI CCNGG 2 cut(s) 49, 50
SfaNI GCATC 3 cut(s) 7, 53, 884
Sfr274I CTCGAG 1 cut(s) 481
SinI GGWCC 1 cut(s) 509
SlaI CTCGAG 1 cut(s) 481
SmaI CCCGGG 1 cut(s) 50
SmiMI CAYNNNNRTG 1 cut(s) 1011
SmlI CTYRAG 5 cut(s) 218, 425, 481, 557, 803
SmoI CTYRAG 5 cut(s) 218, 425, 481, 557, 803
SphI GCATGC 1 cut(s) 363
SspI AATATT 1 cut(s) 990
SspMI CTAG 4 cut(s) 342, 470, 552, 731
StyD4I CCNGG 2 cut(s) 47, 48
StyI CCWWGG 1 cut(s) 341
TaaI ACNGT 3 cut(s) 94, 1106, 1161
TaiI ACGT 1 cut(s) 161
TaqI TCGA 3 cut(s) 78, 482, 1204
TatI WGTACW 2 cut(s) 429, 528
TfiI GAWTC 4 cut(s) 184, 308, 736, 775
Tru1I TTAA 5 cut(s) 372, 818, 857, 917, 1053
Tru9I TTAA 5 cut(s) 372, 818, 857, 917, 1053
TscAI CASTG 1 cut(s) 99
TseFI GTSAC 1 cut(s) 575
TseI GCWGC 1 cut(s) 950
Tsp45I GTSAC 1 cut(s) 575
TspDTI ATGAA 6 cut(s) 137, 176, 192, 843, 856, 1170
TspGWI ACGGA 1 cut(s) 621
TspMI CCCGGG 1 cut(s) 48
TspRI CASTG 1 cut(s) 99
VpaK11BI GGWCC 1 cut(s) 509
XagI CCTNNNNNAGG 2 cut(s) 650, 769
XapI RAATTY 2 cut(s) 938, 1196
XceI RCATGY 3 cut(s) 363, 436, 924
XhoI CTCGAG 1 cut(s) 481
XmaI CCCGGG 1 cut(s) 48
XmaJI CCTAGG 1 cut(s) 341
XmiI GTMKAC 1 cut(s) 107
XmnI GAANNNNTTC 3 cut(s) 128, 183, 1196
XspI CTAG 4 cut(s) 342, 470, 552, 731
ZrmI AGTACT 1 cut(s) 530
Zsp2I ATGCAT 1 cut(s) 365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.