Prupe.1G404600_v2.0.a1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000095
Physical Location & Seq
Forward (+)
35610506 .. 35613118
2613 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G404600.1

Sequence Viewer

Length: 1395 bp
ATGAGAGCTAGTGGTCATATCGCCTCCTCACTCGGTAGTCGGTCGGTGCGGCTGCGTTCTATGGATCAAGGCCAGGGTTTGGTGGATAGAATAAGTGAGTTAGGTGATGGAATACTTGGAGGAATAGTTTCTCGCTTGCCGCTAAAACAAGCAGTTGCTACTTGTGTCCTTTCCAAACGATGGCGCTACGTGTGGTCGCATACTAGAACCTTGAACTTTCACGATGACTATAGGTTCCCTGAGGAGCCGCTCGAAGCAGAGAAGCGAAAAGAGAACTACGTGAAGTTCGTCGATGATGTTTTGAAACACCACACAGGGGGACATCTAGACTATTTTCTGGCTCTTTTTGATGTGGAAAAAGATAAATCTACAAATACAACAGTAAGTAAATGGCTCGAGTTTGCGGAGAAAGCCAAAGCCCAGACAGTTACGTTGCTCATGTTGGTCGAGGGAGCATACTCTGGTAGTATGGACTTGGCCTATGAGTCTGCCCACACATTTATGGGTAACTACGAGATGATGGAGTGTAATGGTCTGACTGATATTGCACACCCTTGCAAGTACATGGGATTCCAGTTTCTAAAGTCTATCCATTTGACAGCGATCGCCACGATGGGAGAAGCTTTGAATTGCCTGTTGGTAAACTGCGGAGGGTTTAGGGATGATAAGCTAAGAGTTGTTGGACCATCAAAGCAATTGATGCACTTAGAGATAGTGAATTGCAGTGCCCAAGCACTTGAGATCAATCATCCAAACCTGGTATCATTTAGTTATGATGGAGATTATAAAACGTTCTTTCTCTCGAATGCACCTCTCCTTGCTGAGGTATCCCTGAAATATACTAGCGATGTTTCTCATTTTGTTGTGTTCTCTAACCTTTACTCCTGTCATCCTAGTATGGAGGTGCTCAAGCTGAATTCAACCCTGTTCTACGGGAATCATGGAAATGGAATTACAAAATTAGCAAATCTCAAACATTTGGAAGTAAAGATTGCAGCTGATGAGGATTGGTGTGTCCTTCTATTAGCTTCCTGCATTGAGGCATGTCCAAAGTTGCAGAAACTGGTGTTGGAGTTGACAGGTATTTTGAGACCCCAACCTGAGATAGAAATCAAGGAAGCTCCAAAAAATTTCCATGGTTCCCTCAAGGTAGTGGAAGTGAAAAACTATCGTGGTCGCCCCGGTGATTTGAAGCTTGTGATGTACTTAATAGACAACGCTGTTGGACTGGAAAAAATTGTCAACCATCCTCTCGGACAAATTAATGGCGAAGAAGAAATGGAAGAGGTCTTTTTCATGTATCGTGCTAGGGAAGAGATGGCACGAAAATTGCCTAAACATATAGAATTGGATGGCCGTAATAACTTTCGGTTTGATCGTCCGGTGTATGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

465

Amino Acids

52.46

Weight (kDa)

6.42

Isoelectric Point (pI)

33.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 786
AccB7I CCANNNNNTGG 2 cut(s) 79, 180
AccBSI CCGCTC 1 cut(s) 250
AciI CCGC 5 cut(s) 49, 140, 248, 404, 648
AclI AACGTT 1 cut(s) 791
AclWI GGATC 1 cut(s) 72
AcoI YGGCCR 1 cut(s) 1354
AcsI RAATTY 2 cut(s) 916, 1129
AfaI GTAC 2 cut(s) 563, 1205
AfiI CCNNNNNNNGG 4 cut(s) 79, 180, 316, 823
AflIII ACRYGT 1 cut(s) 189
AgsI TTSAA 5 cut(s) 214, 304, 628, 921, 1192
AjnI CCWGG 2 cut(s) 72, 756
AjuI GAANNNNNNNTTGG 4 cut(s) 620, 652, 1052, 1084
AluBI AGCT 8 cut(s) 8, 623, 670, 913, 998, 1028, 1121, 1195
AluI AGCT 8 cut(s) 8, 623, 670, 913, 998, 1028, 1121, 1195
Alw21I GWGCWC 1 cut(s) 909
Alw26I GTCTC 1 cut(s) 1084
AlwI GGATC 1 cut(s) 72
AlwNI CAGNNNCTG 1 cut(s) 1063
Ama87I CYCGRG 1 cut(s) 395
AoxI GGCC 3 cut(s) 70, 477, 1354
ApeKI GCWGC 2 cut(s) 52, 995
ApoI RAATTY 2 cut(s) 916, 1129
ArsI GACNNNNNNTTYG 2 cut(s) 1069, 1101
AseI ATTAAT 1 cut(s) 1263
AsiSI GCGATCGC 1 cut(s) 606
Asp700I GAANNNNTTC 1 cut(s) 127
AspLEI GCGC 1 cut(s) 186
AspS9I GGNCC 1 cut(s) 683
AsuC2I CCSGG 1 cut(s) 1182
AsuHPI GGTGA 2 cut(s) 116, 1196
AvaI CYCGRG 1 cut(s) 395
AvaII GGWCC 1 cut(s) 683
AxyI CCTNAGG 1 cut(s) 240
BaeGI GKGCMC 1 cut(s) 730
Bbv12I GWGCWC 1 cut(s) 909
BbvCI CCTCAGC 1 cut(s) 822
BbvI GCAGC 2 cut(s) 39, 1007
BccI CCATC 9 cut(s) 101, 174, 514, 607, 694, 770, 1254, 1312, 1346
BceAI ACGGC 1 cut(s) 1341
BciT130I CCWGG 2 cut(s) 74, 758
BciVI GTATCC 1 cut(s) 838
BcnI CCSGG 1 cut(s) 1182
BcoDI GTCTC 1 cut(s) 1084
BfaI CTAG 6 cut(s) 9, 204, 326, 843, 894, 1308
BfmI CTRYAG 1 cut(s) 229
BfoI RGCGCY 1 cut(s) 187
BfuI GTATCC 1 cut(s) 838
BisI GCNGC 5 cut(s) 50, 53, 140, 248, 996
BlsI GCNGC 5 cut(s) 51, 54, 141, 249, 997
Bme1390I CCNGG 3 cut(s) 74, 758, 1182
Bme18I GGWCC 1 cut(s) 683
BmeT110I CYCGRG 1 cut(s) 395
BmgT120I GGNCC 1 cut(s) 683
BmiI GGNNCC 3 cut(s) 236, 246, 1141
BmrFI CCNGG 3 cut(s) 74, 758, 1182
BmsI GCATC 1 cut(s) 690
Bpu10I CCTNAGC 1 cut(s) 822
BpuEI CTTGAG 3 cut(s) 758, 893, 1130
BpuMI CCSGG 1 cut(s) 1182
BsaAI YACGTR 2 cut(s) 190, 280
BsaBI GATNNNNATC 1 cut(s) 1109
BsaI GGTCTC 1 cut(s) 1084
BsaJI CCNNGG 3 cut(s) 73, 1135, 1180
BsaWI WCCGGW 1 cut(s) 1381
BsaXI ACNNNNNCTCC 4 cut(s) 111, 141, 866, 896
Bsc4I CCNNNNNNNGG 4 cut(s) 79, 180, 316, 823
Bse1I ACTGG 3 cut(s) 574, 1068, 1233
Bse21I CCTNAGG 1 cut(s) 240
Bse8I GATNNNNATC 1 cut(s) 1109
BseBI CCWGG 2 cut(s) 74, 758
BseDI CCNNGG 3 cut(s) 73, 1135, 1180
BseGI GGATG 5 cut(s) 667, 748, 889, 1246, 1357
BseJI GATNNNNATC 1 cut(s) 1109
BseLI CCNNNNNNNGG 4 cut(s) 79, 180, 316, 823
BseMII CTCAG 3 cut(s) 231, 813, 1092
BseNI ACTGG 3 cut(s) 574, 1068, 1233
BseRI GAGGAG 2 cut(s) 16, 257
BseSI GKGCMC 1 cut(s) 730
BseXI GCAGC 2 cut(s) 39, 1007
Bsh1285I CGRYCG 2 cut(s) 44, 606
BshFI GGCC 3 cut(s) 72, 479, 1356
BsiEI CGRYCG 2 cut(s) 44, 606
BsiHKAI GWGCWC 1 cut(s) 909
BsiHKCI CYCGRG 1 cut(s) 395
BsiSI CCGG 2 cut(s) 1182, 1382
BslFI GGGAC 1 cut(s) 333
BslI CCNNNNNNNGG 4 cut(s) 79, 180, 316, 823
BsmAI GTCTC 1 cut(s) 1084
BsmFI GGGAC 1 cut(s) 333
BsmI GAATGC 1 cut(s) 811
BsnI GGCC 3 cut(s) 72, 479, 1356
Bso31I GGTCTC 1 cut(s) 1084
BsoBI CYCGRG 1 cut(s) 395
Bsp1286I GDGCHC 2 cut(s) 730, 909
Bsp143I GATC 4 cut(s) 64, 603, 741, 1375
Bsp19I CCATGG 1 cut(s) 1135
BspACI CCGC 5 cut(s) 49, 140, 248, 404, 648
BspANI GGCC 3 cut(s) 72, 479, 1356
BspCNI CTCAG 3 cut(s) 232, 814, 1093
BspLI GGNNCC 3 cut(s) 236, 246, 1141
BspPI GGATC 1 cut(s) 72
BspTNI GGTCTC 1 cut(s) 1084
BsrBI CCGCTC 1 cut(s) 250
BsrI ACTGG 3 cut(s) 574, 1068, 1233
BssECI CCNNGG 3 cut(s) 73, 1135, 1180
BssMI GATC 4 cut(s) 64, 603, 741, 1375
BssT1I CCWWGG 1 cut(s) 1135
Bst2UI CCWGG 2 cut(s) 74, 758
Bst4CI ACNGT 2 cut(s) 382, 427
Bst6I CTCTTC 2 cut(s) 1278, 1308
BstAPI GCANNNNNTGC 1 cut(s) 700
BstBAI YACGTR 2 cut(s) 190, 280
BstC8I GCNNGC 1 cut(s) 137
BstDEI CTNAG 5 cut(s) 240, 671, 706, 822, 1101
BstDSI CCRYGG 1 cut(s) 1135
BstENI CCTNNNNNAGG 1 cut(s) 821
BstF5I GGATG 5 cut(s) 667, 748, 889, 1246, 1357
BstH2I RGCGCY 1 cut(s) 187
BstHHI GCGC 1 cut(s) 186
BstKTI GATC 4 cut(s) 67, 606, 744, 1378
BstMAI GTCTC 1 cut(s) 1084
BstMBI GATC 4 cut(s) 64, 603, 741, 1375
BstMCI CGRYCG 2 cut(s) 44, 606
BstMWI GCNNNNNNNGC 2 cut(s) 410, 700
BstNI CCWGG 2 cut(s) 74, 758
BstNSI RCATGY 1 cut(s) 1047
BstSCI CCNGG 3 cut(s) 72, 756, 1180
BstSFI CTRYAG 1 cut(s) 229
BstSLI GKGCMC 1 cut(s) 730
BstV1I GCAGC 2 cut(s) 39, 1007
Bsu36I CCTNAGG 1 cut(s) 240
BsuI GTATCC 1 cut(s) 838
BsuRI GGCC 3 cut(s) 72, 479, 1356
BtgI CCRYGG 1 cut(s) 1135
BtgZI GCGATG 1 cut(s) 861
BtsCI GGATG 5 cut(s) 667, 748, 889, 1246, 1357
BtsI GCAGTG 1 cut(s) 730
BtsIMutI CAGTG 1 cut(s) 730
Cac8I GCNNGC 1 cut(s) 137
CaiI CAGNNNCTG 1 cut(s) 1063
CfoI GCGC 1 cut(s) 186
Cfr13I GGNCC 1 cut(s) 683
CsiI ACCWGGT 1 cut(s) 756
Csp6I GTAC 2 cut(s) 562, 1204
CviAII CATG 6 cut(s) 439, 565, 941, 1044, 1136, 1297
CviQI GTAC 2 cut(s) 562, 1204
DdeI CTNAG 5 cut(s) 240, 671, 706, 822, 1101
DpnI GATC 4 cut(s) 66, 605, 743, 1377
DpnII GATC 4 cut(s) 64, 603, 741, 1375
EaeI YGGCCR 1 cut(s) 1354
Eam1104I CTCTTC 2 cut(s) 1278, 1308
EarI CTCTTC 2 cut(s) 1278, 1308
Eco130I CCWWGG 1 cut(s) 1135
Eco31I GGTCTC 1 cut(s) 1084
Eco47I GGWCC 1 cut(s) 683
Eco81I CCTNAGG 1 cut(s) 240
Eco88I CYCGRG 1 cut(s) 395
EcoNI CCTNNNNNAGG 1 cut(s) 821
EcoRI GAATTC 1 cut(s) 916
EcoRII CCWGG 2 cut(s) 72, 756
EcoT14I CCWWGG 1 cut(s) 1135
ErhI CCWWGG 1 cut(s) 1135
FaeI CATG 6 cut(s) 442, 568, 944, 1047, 1139, 1300
FaqI GGGAC 1 cut(s) 333
FatI CATG 6 cut(s) 438, 564, 940, 1043, 1135, 1296
Fnu4HI GCNGC 5 cut(s) 50, 53, 140, 248, 996
FokI GGATG 5 cut(s) 674, 735, 876, 1233, 1364
Fsp4HI GCNGC 5 cut(s) 50, 53, 140, 248, 996
FspBI CTAG 6 cut(s) 9, 204, 326, 843, 894, 1308
GlaI GCGC 1 cut(s) 185
GluI GCNGC 5 cut(s) 50, 53, 140, 248, 996
HaeII RGCGCY 1 cut(s) 187
HaeIII GGCC 3 cut(s) 72, 479, 1356
HapII CCGG 2 cut(s) 1182, 1382
HhaI GCGC 1 cut(s) 186
Hin1II CATG 6 cut(s) 442, 568, 944, 1047, 1139, 1300
Hin6I GCGC 1 cut(s) 184
HinP1I GCGC 1 cut(s) 184
HincII GTYRAC 2 cut(s) 1077, 1243
HindII GTYRAC 2 cut(s) 1077, 1243
HindIII AAGCTT 2 cut(s) 621, 1193
HinfI GANTC 3 cut(s) 485, 570, 937
HpaII CCGG 2 cut(s) 1182, 1382
HphI GGTGA 2 cut(s) 116, 1196
Hpy166II GTNNAC 3 cut(s) 643, 1077, 1243
Hpy188I TCNGA 2 cut(s) 537, 1256
Hpy188III TCNNGA 3 cut(s) 221, 326, 802
Hpy8I GTNNAC 3 cut(s) 643, 1077, 1243
Hpy99I CGWCG 1 cut(s) 293
HpyAV CCTTC 1 cut(s) 1028
HpyCH4III ACNGT 2 cut(s) 382, 427
HpyCH4IV ACGT 4 cut(s) 189, 279, 431, 791
HpyCH4V TGCA 8 cut(s) 548, 558, 703, 723, 809, 995, 1035, 1057
HpyF10VI GCNNNNNNNGC 2 cut(s) 410, 700
HpyF3I CTNAG 5 cut(s) 240, 671, 706, 822, 1101
HpySE526I ACGT 4 cut(s) 189, 279, 431, 791
Hsp92II CATG 6 cut(s) 442, 568, 944, 1047, 1139, 1300
HspAI GCGC 1 cut(s) 184
Kzo9I GATC 4 cut(s) 64, 603, 741, 1375
LmnI GCTCC 3 cut(s) 244, 452, 1126
Lsp1109I GCAGC 2 cut(s) 39, 1007
LweI GCATC 1 cut(s) 690
MabI ACCWGGT 1 cut(s) 756
MaeI CTAG 6 cut(s) 9, 204, 326, 843, 894, 1308
MaeII ACGT 4 cut(s) 189, 279, 431, 791
MaeIII GTNAC 2 cut(s) 427, 506
MalI GATC 4 cut(s) 66, 605, 743, 1377
MbiI CCGCTC 1 cut(s) 250
MboI GATC 4 cut(s) 64, 603, 741, 1375
MboII GAAGA 4 cut(s) 1283, 1286, 1295, 1325
MfeI CAATTG 1 cut(s) 695
MhlI GDGCHC 2 cut(s) 730, 909
MlyI GAGTC 1 cut(s) 494
MmeI TCCRAC 3 cut(s) 661, 1050, 1204
MroXI GAANNNNTTC 1 cut(s) 127
MseI TTAA 2 cut(s) 1208, 1263
MslI CAYNNNNRTG 2 cut(s) 500, 945
MspA1I CMGCKG 1 cut(s) 998
MspI CCGG 2 cut(s) 1182, 1382
MspR9I CCNGG 3 cut(s) 74, 758, 1182
MunI CAATTG 1 cut(s) 695
Mva1269I GAATGC 1 cut(s) 811
MvaI CCWGG 2 cut(s) 74, 758
MwoI GCNNNNNNNGC 2 cut(s) 410, 700
NciI CCSGG 1 cut(s) 1182
NcoI CCATGG 1 cut(s) 1135
NdeII GATC 4 cut(s) 64, 603, 741, 1375
NlaIII CATG 6 cut(s) 442, 568, 944, 1047, 1139, 1300
NlaIV GGNNCC 3 cut(s) 236, 246, 1141
NspI RCATGY 1 cut(s) 1047
PaeR7I CTCGAG 1 cut(s) 395
PcsI WCGNNNNNNNCGW 2 cut(s) 285, 1375
PctI GAATGC 1 cut(s) 811
PdmI GAANNNNTTC 1 cut(s) 127
PfeI GAWTC 2 cut(s) 570, 937
PflMI CCANNNNNTGG 2 cut(s) 79, 180
PkrI GCNGC 5 cut(s) 51, 54, 141, 249, 997
Ple19I CGATCG 1 cut(s) 606
PleI GAGTC 1 cut(s) 493
PpsI GAGTC 1 cut(s) 493
Ppu21I YACGTR 2 cut(s) 190, 280
PshBI ATTAAT 1 cut(s) 1263
PsiI TTATAA 1 cut(s) 786
Psp1406I AACGTT 1 cut(s) 791
Psp6I CCWGG 2 cut(s) 72, 756
PspGI CCWGG 2 cut(s) 72, 756
PspN4I GGNNCC 3 cut(s) 236, 246, 1141
PspPI GGNCC 1 cut(s) 683
PspXI VCTCGAGB 1 cut(s) 395
PstNI CAGNNNCTG 1 cut(s) 1063
PvuI CGATCG 1 cut(s) 606
PvuII CAGCTG 1 cut(s) 998
RgaI GCGATCGC 1 cut(s) 606
RsaI GTAC 2 cut(s) 563, 1205
RsaNI GTAC 2 cut(s) 562, 1204
RseI CAYNNNNRTG 2 cut(s) 500, 945
SaqAI TTAA 2 cut(s) 1208, 1263
SatI GCNGC 5 cut(s) 50, 53, 140, 248, 996
Sau3AI GATC 4 cut(s) 64, 603, 741, 1375
Sau96I GGNCC 1 cut(s) 683
SchI GAGTC 1 cut(s) 494
ScrFI CCNGG 3 cut(s) 74, 758, 1182
SduI GDGCHC 2 cut(s) 730, 909
SexAI ACCWGGT 1 cut(s) 756
SfaAI GCGATCGC 1 cut(s) 606
SfaNI GCATC 1 cut(s) 690
SfcI CTRYAG 1 cut(s) 229
Sfr274I CTCGAG 1 cut(s) 395
SgfI GCGATCGC 1 cut(s) 606
SinI GGWCC 1 cut(s) 683
SlaI CTCGAG 1 cut(s) 395
SmiMI CAYNNNNRTG 2 cut(s) 500, 945
SmlI CTYRAG 4 cut(s) 395, 737, 908, 1145
SmoI CTYRAG 4 cut(s) 395, 737, 908, 1145
SsiI CCGC 5 cut(s) 49, 140, 248, 404, 648
SspMI CTAG 6 cut(s) 9, 204, 326, 843, 894, 1308
StyD4I CCNGG 3 cut(s) 72, 756, 1180
StyI CCWWGG 1 cut(s) 1135
TaaI ACNGT 2 cut(s) 382, 427
TaiI ACGT 4 cut(s) 192, 282, 434, 794
TaqI TCGA 5 cut(s) 252, 291, 396, 447, 803
TaqII GACCGA 1 cut(s) 30
TatI WGTACW 2 cut(s) 561, 1203
TauI GCSGC 3 cut(s) 52, 142, 250
TfiI GAWTC 2 cut(s) 570, 937
Tru1I TTAA 2 cut(s) 1208, 1263
Tru9I TTAA 2 cut(s) 1208, 1263
TscAI CASTG 1 cut(s) 730
TseI GCWGC 2 cut(s) 52, 995
TspDTI ATGAA 1 cut(s) 1285
TspRI CASTG 1 cut(s) 730
Van91I CCANNNNNTGG 2 cut(s) 79, 180
VpaK11BI GGWCC 1 cut(s) 683
VspI ATTAAT 1 cut(s) 1263
XagI CCTNNNNNAGG 1 cut(s) 821
XapI RAATTY 2 cut(s) 916, 1129
XbaI TCTAGA 1 cut(s) 325
XceI RCATGY 1 cut(s) 1047
XhoI CTCGAG 1 cut(s) 395
XmnI GAANNNNTTC 1 cut(s) 127
XspI CTAG 6 cut(s) 9, 204, 326, 843, 894, 1308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.