Rh3DG020500

diphthine-ammonia ligase activity

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Reverse (-)
1296895 .. 1310435
13541 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG020500.1

Sequence Viewer

Length: 1329 bp
ATGGTGGACAGGGTCAGTGCATTGCCCGATGACATTCTTGTTAGTTTAGTGTCCCGCTTGCCGCTAAAGGAAGCAGTAGCTACCAGTGTCCTTTCTAGGCGATGGCAGAATGTGGGACTGTCTACTATGACCCTTAGGTTTGATGCTGTTGACTTCTCAATTGACAATAATTTACGCCACTACCGGTGCCAACCAAAAGAATTTATAGAGCAGGAGAGCTGGAAATACATCAATTGGGTGAATCATGTGGTGCAAAAGTATAGAGGCAAACATTTGAACCATATACATCAATTGGGTGAATTCAGGATTAGCTTCTGTTTAGATAGTCGCTTTTCAAGTTCCATTAATGAATGGATTCAATTTGCAATGGAAAACAGTGTTGAAATGCTTGAATTGGATTTTTATCCACAAGTTTTTGCTAGATATGAAGACTATACATTTTCCCACAAACTTTTGGGTATCGGTTTCAAATACCTCAAAGTTCTTCAGCTCCGACATGTTGGTGTGACTGGAAAAGTTCTCGAGTGTTTCCTGTCCAACTGTCCGGTACTTGAGAGATTATCAGTGACTTCCGCAAAAGATTTGGTAAATTTAAGAGTTGTTGGTTCGTTGATTGCGTTGAAGTATTTGGTGATACAAACTTGTTTTAACCTGGAAAGCATTGAGATCAGAGATGTAAACATCGTTTCACTTATTTATTGTGGATTTAGATCGACAAACCTGCTTATCAGTAATGTACCATTGCTTTCTGAGGTAACAGTTTCTAAGCAGTGTTGGCAAAAGGATTTTATAAGGGTTGTCTTTACCCAACTTTCCTGCTGTCTTTCCAGCATAGAGATTCTGAAGCTGCATATCGAGGGAGCGGCCTACAATGAGCATCCTGCATTGCCTTTATTAGCCAATCTGAAGCATTTGGAATTACTAGTTGCAGCAAATTATTATAGGGCACTTCATCATTTAAATAACTTCCTGAAGGCATCTCCTTACTTGCAGAGACTCGTATTGAAGTTGCAGCTGTATCTGGGGGGTCCAGCACGCATGGAACTTGGAGAAATTGAGAAAGCAGCTGATTGCCCCCATAATCACCTCAAGGTAGTAGAAATAGTTGGCTATCGAGCTCATACATCTGGTGTTGAACATGTCATGCACTTAATAAAGAATGTCCTTGCACTGGAGAAAATTGTGATTGATCCTGTACGGACATGGCAATATCCTCATGGAGTTGATAGGCCAGATACAGACCTCGATAAAGAAGTCAAGGCTAGAGACCATGCTAAGCAATACCTTGAACCAAAAATCCCTTCAACTGTAGAATTTGTGTGCCTGTAG

Protein Analysis

442

Amino Acids

50.82

Weight (kDa)

7.96

Isoelectric Point (pI)

36.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 156 - 439 3.3e-35 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 791
Acc36I ACCTGC 1 cut(s) 729
AccB1I GGYRCC 1 cut(s) 186
AccBSI CCGCTC 1 cut(s) 863
AccI GTMKAC 1 cut(s) 122
AciI CCGC 4 cut(s) 55, 62, 573, 863
AclWI GGATC 1 cut(s) 1184
AcsI RAATTY 4 cut(s) 200, 299, 589, 1313
AcuI CTGAAG 4 cut(s) 470, 863, 926, 992
AfaI GTAC 3 cut(s) 549, 738, 1197
AfiI CCNNNNNNNGG 1 cut(s) 1171
AflIII ACRYGT 2 cut(s) 496, 1138
AgeI ACCGGT 1 cut(s) 183
AhlI ACTAGT 1 cut(s) 922
AjnI CCWGG 1 cut(s) 651
AjuI GAANNNNNNNTTGG 2 cut(s) 1285, 1317
AloI GAACNNNNNNTCC 2 cut(s) 1281, 1313
AluBI AGCT 8 cut(s) 80, 219, 312, 490, 847, 1015, 1067, 1118
AluI AGCT 8 cut(s) 80, 219, 312, 490, 847, 1015, 1067, 1118
Alw21I GWGCWC 1 cut(s) 1120
Alw26I GTCTC 2 cut(s) 988, 1260
AlwI GGATC 1 cut(s) 1184
Ama87I CYCGRG 1 cut(s) 521
AoxI GGCC 2 cut(s) 864, 1229
ApeKI GCWGC 4 cut(s) 847, 929, 1012, 1064
ApoI RAATTY 4 cut(s) 200, 299, 589, 1313
AseI ATTAAT 1 cut(s) 345
AsiGI ACCGGT 1 cut(s) 183
Asp700I GAANNNNTTC 1 cut(s) 354
AspS9I GGNCC 1 cut(s) 1028
AsuHPI GGTGA 4 cut(s) 250, 308, 643, 1076
AvaI CYCGRG 1 cut(s) 521
AvaII GGWCC 1 cut(s) 1028
AxyI CCTNAGG 1 cut(s) 134
BaeGI GKGCMC 1 cut(s) 949
BanI GGYRCC 1 cut(s) 186
BanII GRGCYC 1 cut(s) 1120
BbsI GAAGAC 1 cut(s) 435
Bbv12I GWGCWC 1 cut(s) 1120
BbvI GCAGC 4 cut(s) 834, 941, 1024, 1076
BccI CCATC 1 cut(s) 96
BcgI CGANNNNNNTGC 2 cut(s) 703, 737
BciT130I CCWGG 1 cut(s) 653
BcoDI GTCTC 2 cut(s) 988, 1260
BcuI ACTAGT 1 cut(s) 922
BfaI CTAG 4 cut(s) 96, 420, 923, 1263
BfmI CTRYAG 2 cut(s) 1308, 1325
BfuAI ACCTGC 1 cut(s) 729
BisI GCNGC 6 cut(s) 62, 848, 864, 930, 1013, 1065
BlpI GCTNAGC 1 cut(s) 1275
BlsI GCNGC 6 cut(s) 63, 849, 865, 931, 1014, 1066
Bme1390I CCNGG 1 cut(s) 653
Bme18I GGWCC 1 cut(s) 1028
BmeT110I CYCGRG 1 cut(s) 521
BmgT120I GGNCC 1 cut(s) 1028
BmiI GGNNCC 2 cut(s) 188, 1029
BmrFI CCNGG 1 cut(s) 653
BmsI GCATC 3 cut(s) 133, 886, 986
BpiI GAAGAC 1 cut(s) 435
BpmI CTGGAG 1 cut(s) 1193
Bpu1102I GCTNAGC 1 cut(s) 1275
BpuEI CTTGAG 2 cut(s) 572, 1073
BsaBI GATNNNNATC 2 cut(s) 402, 709
BsaI GGTCTC 1 cut(s) 1260
BsaWI WCCGGW 2 cut(s) 183, 544
Bsc4I CCNNNNNNNGG 1 cut(s) 1171
Bse118I RCCGGY 1 cut(s) 183
Bse1I ACTGG 3 cut(s) 84, 514, 1176
Bse21I CCTNAGG 1 cut(s) 134
Bse3DI GCAATG 4 cut(s) 20, 372, 740, 884
Bse8I GATNNNNATC 2 cut(s) 402, 709
BseBI CCWGG 1 cut(s) 653
BseGI GGATG 1 cut(s) 877
BseJI GATNNNNATC 2 cut(s) 402, 709
BseLI CCNNNNNNNGG 1 cut(s) 1171
BseMI GCAATG 4 cut(s) 20, 372, 740, 884
BseMII CTCAG 1 cut(s) 741
BseNI ACTGG 3 cut(s) 84, 514, 1176
BseSI GKGCMC 1 cut(s) 949
BseXI GCAGC 4 cut(s) 834, 941, 1024, 1076
BshFI GGCC 2 cut(s) 866, 1231
BshNI GGYRCC 1 cut(s) 186
BshTI ACCGGT 1 cut(s) 183
BsiHKAI GWGCWC 1 cut(s) 1120
BsiHKCI CYCGRG 1 cut(s) 521
BsiSI CCGG 2 cut(s) 184, 545
BslFI GGGAC 2 cut(s) 37, 129
BslI CCNNNNNNNGG 1 cut(s) 1171
BsmAI GTCTC 2 cut(s) 988, 1260
BsmFI GGGAC 2 cut(s) 37, 129
BsnI GGCC 2 cut(s) 866, 1231
Bso31I GGTCTC 1 cut(s) 1260
BsoBI CYCGRG 1 cut(s) 521
Bsp1286I GDGCHC 2 cut(s) 949, 1120
Bsp143I GATC 3 cut(s) 666, 710, 1189
Bsp1720I GCTNAGC 1 cut(s) 1275
BspACI CCGC 4 cut(s) 55, 62, 573, 863
BspANI GGCC 2 cut(s) 866, 1231
BspCNI CTCAG 1 cut(s) 742
BspLI GGNNCC 2 cut(s) 188, 1029
BspMI ACCTGC 1 cut(s) 729
BspPI GGATC 1 cut(s) 1184
BspT107I GGYRCC 1 cut(s) 186
BspTNI GGTCTC 1 cut(s) 1260
BsrBI CCGCTC 1 cut(s) 863
BsrDI GCAATG 4 cut(s) 20, 372, 740, 884
BsrFI RCCGGY 1 cut(s) 183
BsrI ACTGG 3 cut(s) 84, 514, 1176
BssAI RCCGGY 1 cut(s) 183
BssMI GATC 3 cut(s) 666, 710, 1189
Bst2UI CCWGG 1 cut(s) 653
Bst4CI ACNGT 5 cut(s) 120, 377, 542, 760, 1309
BstC8I GCNNGC 2 cut(s) 59, 1036
BstDEI CTNAG 4 cut(s) 134, 750, 765, 1275
BstF5I GGATG 1 cut(s) 877
BstKTI GATC 3 cut(s) 669, 713, 1192
BstMAI GTCTC 2 cut(s) 988, 1260
BstMBI GATC 3 cut(s) 666, 710, 1189
BstMWI GCNNNNNNNGC 1 cut(s) 775
BstNI CCWGG 1 cut(s) 653
BstNSI RCATGY 2 cut(s) 500, 1142
BstSCI CCNGG 1 cut(s) 651
BstSFI CTRYAG 2 cut(s) 1308, 1325
BstSLI GKGCMC 1 cut(s) 949
BstV1I GCAGC 4 cut(s) 834, 941, 1024, 1076
BstV2I GAAGAC 1 cut(s) 435
Bsu36I CCTNAGG 1 cut(s) 134
BsuRI GGCC 2 cut(s) 866, 1231
BtgZI GCGATG 1 cut(s) 115
BtsCI GGATG 1 cut(s) 877
BtsI GCAGTG 1 cut(s) 776
BtsIMutI CAGTG 6 cut(s) 22, 91, 382, 570, 776, 1169
BveI ACCTGC 1 cut(s) 729
Cac8I GCNNGC 2 cut(s) 59, 1036
Cfr10I RCCGGY 1 cut(s) 183
Cfr13I GGNCC 1 cut(s) 1028
Csp6I GTAC 3 cut(s) 548, 737, 1196
CspAI ACCGGT 1 cut(s) 183
CviAII CATG 8 cut(s) 245, 497, 1039, 1139, 1144, 1203, 1217, 1271
CviQI GTAC 3 cut(s) 548, 737, 1196
DdeI CTNAG 4 cut(s) 134, 750, 765, 1275
DpnI GATC 3 cut(s) 668, 712, 1191
DpnII GATC 3 cut(s) 666, 710, 1189
DraI TTTAAA 1 cut(s) 960
Ecl136II GAGCTC 1 cut(s) 1118
Eco24I GRGCYC 1 cut(s) 1120
Eco31I GGTCTC 1 cut(s) 1260
Eco47I GGWCC 1 cut(s) 1028
Eco53kI GAGCTC 1 cut(s) 1118
Eco57I CTGAAG 4 cut(s) 470, 863, 926, 992
Eco81I CCTNAGG 1 cut(s) 134
Eco88I CYCGRG 1 cut(s) 521
EcoICRI GAGCTC 1 cut(s) 1118
EcoRI GAATTC 1 cut(s) 299
EcoRII CCWGG 1 cut(s) 651
EcoT38I GRGCYC 1 cut(s) 1120
FaeI CATG 8 cut(s) 248, 500, 1042, 1142, 1147, 1206, 1220, 1274
FaqI GGGAC 2 cut(s) 37, 129
FatI CATG 8 cut(s) 244, 496, 1038, 1138, 1143, 1202, 1216, 1270
FauI CCCGC 1 cut(s) 62
FblI GTMKAC 1 cut(s) 122
Fnu4HI GCNGC 6 cut(s) 62, 848, 864, 930, 1013, 1065
FokI GGATG 1 cut(s) 864
FriOI GRGCYC 1 cut(s) 1120
Fsp4HI GCNGC 6 cut(s) 62, 848, 864, 930, 1013, 1065
FspBI CTAG 4 cut(s) 96, 420, 923, 1263
GluI GCNGC 6 cut(s) 62, 848, 864, 930, 1013, 1065
GsuI CTGGAG 1 cut(s) 1193
HaeIII GGCC 2 cut(s) 866, 1231
HapII CCGG 2 cut(s) 184, 545
Hin1II CATG 8 cut(s) 248, 500, 1042, 1142, 1147, 1206, 1220, 1274
HincII GTYRAC 1 cut(s) 151
HindII GTYRAC 1 cut(s) 151
HinfI GANTC 4 cut(s) 241, 355, 838, 996
HpaII CCGG 2 cut(s) 184, 545
HphI GGTGA 4 cut(s) 250, 308, 643, 1076
Hpy166II GTNNAC 4 cut(s) 7, 123, 151, 679
Hpy188I TCNGA 5 cut(s) 494, 671, 751, 843, 906
Hpy188III TCNNGA 3 cut(s) 304, 521, 970
Hpy8I GTNNAC 4 cut(s) 7, 123, 151, 679
HpyAV CCTTC 2 cut(s) 967, 1311
HpyCH4III ACNGT 5 cut(s) 120, 377, 542, 760, 1309
HpyF10VI GCNNNNNNNGC 1 cut(s) 775
HpyF3I CTNAG 4 cut(s) 134, 750, 765, 1275
Hsp92II CATG 8 cut(s) 248, 500, 1042, 1142, 1147, 1206, 1220, 1274
Kzo9I GATC 3 cut(s) 666, 710, 1189
LmnI GCTCC 2 cut(s) 495, 860
Lsp1109I GCAGC 4 cut(s) 834, 941, 1024, 1076
LweI GCATC 3 cut(s) 133, 886, 986
MaeI CTAG 4 cut(s) 96, 420, 923, 1263
MaeIII GTNAC 3 cut(s) 505, 565, 754
MalI GATC 3 cut(s) 668, 712, 1191
MbiI CCGCTC 1 cut(s) 863
MboI GATC 3 cut(s) 666, 710, 1189
MboII GAAGA 2 cut(s) 440, 476
MfeI CAATTG 3 cut(s) 159, 232, 290
MhlI GDGCHC 2 cut(s) 949, 1120
MlyI GAGTC 1 cut(s) 990
MmeI TCCRAC 2 cut(s) 517, 561
MnlI CCTC 7 cut(s) 257, 485, 745, 850, 1097, 1224, 1253
MroXI GAANNNNTTC 1 cut(s) 354
MseI TTAA 5 cut(s) 345, 593, 648, 959, 1151
MslI CAYNNNNRTG 1 cut(s) 501
MspA1I CMGCKG 2 cut(s) 1015, 1067
MspI CCGG 2 cut(s) 184, 545
MspR9I CCNGG 1 cut(s) 653
MunI CAATTG 3 cut(s) 159, 232, 290
MvaI CCWGG 1 cut(s) 653
MwoI GCNNNNNNNGC 1 cut(s) 775
NdeII GATC 3 cut(s) 666, 710, 1189
NlaIII CATG 8 cut(s) 248, 500, 1042, 1142, 1147, 1206, 1220, 1274
NlaIV GGNNCC 2 cut(s) 188, 1029
NmuCI GTSAC 2 cut(s) 505, 565
NspI RCATGY 2 cut(s) 500, 1142
PaeR7I CTCGAG 1 cut(s) 521
PciI ACATGT 2 cut(s) 496, 1138
PcsI WCGNNNNNNNCGW 1 cut(s) 614
PdmI GAANNNNTTC 1 cut(s) 354
PfeI GAWTC 3 cut(s) 241, 355, 838
PflFI GACNNNGTC 1 cut(s) 11
PinAI ACCGGT 1 cut(s) 183
PkrI GCNGC 6 cut(s) 63, 849, 865, 931, 1014, 1066
PleI GAGTC 1 cut(s) 990
PpsI GAGTC 1 cut(s) 990
PscI ACATGT 2 cut(s) 496, 1138
PshBI ATTAAT 1 cut(s) 345
PsiI TTATAA 1 cut(s) 791
Psp124BI GAGCTC 1 cut(s) 1120
Psp6I CCWGG 1 cut(s) 651
PspGI CCWGG 1 cut(s) 651
PspN4I GGNNCC 2 cut(s) 188, 1029
PspPI GGNCC 1 cut(s) 1028
PsyI GACNNNGTC 1 cut(s) 11
PvuII CAGCTG 2 cut(s) 1015, 1067
RsaI GTAC 3 cut(s) 549, 738, 1197
RsaNI GTAC 3 cut(s) 548, 737, 1196
RseI CAYNNNNRTG 1 cut(s) 501
SacI GAGCTC 1 cut(s) 1120
SaqAI TTAA 5 cut(s) 345, 593, 648, 959, 1151
SatI GCNGC 6 cut(s) 62, 848, 864, 930, 1013, 1065
Sau3AI GATC 3 cut(s) 666, 710, 1189
Sau96I GGNCC 1 cut(s) 1028
SchI GAGTC 1 cut(s) 990
ScrFI CCNGG 1 cut(s) 653
SduI GDGCHC 2 cut(s) 949, 1120
SfaNI GCATC 3 cut(s) 133, 886, 986
SfcI CTRYAG 2 cut(s) 1308, 1325
Sfr274I CTCGAG 1 cut(s) 521
SinI GGWCC 1 cut(s) 1028
SlaI CTCGAG 1 cut(s) 521
SmiI ATTTAAAT 1 cut(s) 960
SmiMI CAYNNNNRTG 1 cut(s) 501
SmlI CTYRAG 3 cut(s) 521, 551, 1088
SmoI CTYRAG 3 cut(s) 521, 551, 1088
SpeI ACTAGT 1 cut(s) 922
SsiI CCGC 4 cut(s) 55, 62, 573, 863
SspMI CTAG 4 cut(s) 96, 420, 923, 1263
SstI GAGCTC 1 cut(s) 1120
StyD4I CCNGG 1 cut(s) 651
SwaI ATTTAAAT 1 cut(s) 960
TaaI ACNGT 5 cut(s) 120, 377, 542, 760, 1309
TaqI TCGA 5 cut(s) 522, 713, 855, 1114, 1245
TauI GCSGC 2 cut(s) 64, 866
TfiI GAWTC 3 cut(s) 241, 355, 838
Tru1I TTAA 5 cut(s) 345, 593, 648, 959, 1151
Tru9I TTAA 5 cut(s) 345, 593, 648, 959, 1151
TscAI CASTG 6 cut(s) 22, 91, 382, 570, 776, 1176
TseFI GTSAC 2 cut(s) 505, 565
TseI GCWGC 4 cut(s) 847, 929, 1012, 1064
Tsp45I GTSAC 2 cut(s) 505, 565
TspDTI ATGAA 3 cut(s) 363, 441, 941
TspGWI ACGGA 1 cut(s) 1213
TspRI CASTG 6 cut(s) 22, 91, 382, 570, 776, 1176
Tth111I GACNNNGTC 1 cut(s) 11
VpaK11BI GGWCC 1 cut(s) 1028
VspI ATTAAT 1 cut(s) 345
XapI RAATTY 4 cut(s) 200, 299, 589, 1313
XceI RCATGY 2 cut(s) 500, 1142
XhoI CTCGAG 1 cut(s) 521
XmiI GTMKAC 1 cut(s) 122
XmnI GAANNNNTTC 1 cut(s) 354
XspI CTAG 4 cut(s) 96, 420, 923, 1263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.