Rh1DG112700

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000095
Physical Location & Seq
Forward (+)
20755033 .. 20758160
3128 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG112700.1

Sequence Viewer

Length: 1329 bp
ATGTTTAAGCATAAACGTGGGTACAACGACATAGTGGATGAAATGGGTGGATTGCCAGATGAAATTCTTGTTAGTATATTGTCTCTGTTGCCGTTAAAGGAAGCAGCAGCTACTAGTATCCTTTCTAGGCGATGGCGGCATCTTTGGACATCTACCTCGACTCTCACCTTTGATTCTGATATTATGTTGTATTTTGACCCAACCAAAAGTTTCAAGTCAGAAACCTCCAAGTACATCAATTGGGTGGACAGTGTGATGGAACAACATAGAGTCCCGAACATTGAACACCTCAAGATCTCGTTTGATCTAGATGAAAGTCGTGCAGTTTGCATTAACAAGTGGATTCAAATTGCATTGAAGAAACGAGTTCAGATTCTTGAGTTGGACTTGTTAGAATGGGGTTGCTTTTTTCAACAGGATAGGCAGTGTTATAAACTTCCCCGTCGACTTTTACACTCTAATCGTGATTACATTGGCTCCCTCAAAGTCCTTGACTTCAAATCTGTTGCTGTGGATGGAAAAATTCTTGAATACCTGCTTTCTAGCTGTCCGCTCCTTGAACGATTATCAGTTTATGACTCCCAAAAGTTGGTTAAGCTAAGAGTTGTGGGTCTGTCAATTGCATTGAAGTATTTATCAATTGAACGATGTTACAAAATCAAAAGCATTGAGATTTGTGATGCCCCAAAGCTTGTTTCACTGATTTATCATGGAGAAAGTGGAGGAGAAAACGTAAACTCGTTTCTGATTAGGAATGTCCCGCTTCTAGTGGAAGTATCCATTCTTACAGAATGGATGGAGAGTTTCTTCAAGGCCGGTTGTCTTTCTCAATTGGAGATTCTCAGACTGTACCCTTCAATGCGATATGAGAAGTACCTTCAATTTCCTCCATTAGCAAATCTCAAGTACTTGGAATTAAGAGTTATAGCACATGATCAGTGCACTCTTCTTCAGTTAACTTCTGTAATGAAGGCATGCCCTTACTTGCACAGATTTGTGTTGCAGTTGAGACACTTTACACCGGCCTTTGGAGGAAGTTTGATAAAGATGAATGCTTCCAAATCCCCCCACTATTACCTCAAGGTAGTGGAAATAGCAGGGTATCGTGGTCAGACAAGTGATTATGAATATGTAAAGTACTTCATAGAGAATGCGGTTGAGCTGGAGAAACTTATTATCAATCCTGTTAAGTGGACTCCATATATAGCTGACAGAAACAGAATCCCTAAGAGTAATAGTGAAGTCAAGATGGAAGACGAGGCAAGAGCTCATGCGAGGCAACACGTTAGAGAAAAAGTTCCTTCAAATATAGAATTTGTATGCATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

442

Amino Acids

51.39

Weight (kDa)

8.79

Isoelectric Point (pI)

45.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 17 - 48 5.6e-06 F-box-like
F-box PF00646 18 - 52 4.1e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 85 - 439 2.7e-26 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 159 - 256 9.2e-08 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 360 - 393 4.5e-07 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 432
Acc36I ACCTGC 1 cut(s) 543
AccB7I CCANNNNNTGG 1 cut(s) 589
AccBSI CCGCTC 1 cut(s) 553
AccI GTMKAC 1 cut(s) 445
AciI CCGC 4 cut(s) 136, 551, 761, 1154
AcsI RAATTY 3 cut(s) 63, 522, 1313
AcuI CTGAAG 1 cut(s) 935
AfaI GTAC 6 cut(s) 23, 233, 851, 875, 908, 1139
AfiI CCNNNNNNNGG 2 cut(s) 589, 1028
AflIII ACRYGT 1 cut(s) 1282
AhlI ACTAGT 1 cut(s) 113
AjuI GAANNNNNNNTTGG 2 cut(s) 679, 711
AluBI AGCT 7 cut(s) 110, 546, 598, 691, 1162, 1208, 1268
AluI AGCT 7 cut(s) 110, 546, 598, 691, 1162, 1208, 1268
Alw21I GWGCWC 2 cut(s) 944, 1270
Alw26I GTCTC 2 cut(s) 87, 1003
Alw44I GTGCAC 1 cut(s) 940
AoxI GGCC 2 cut(s) 813, 1023
ApaLI GTGCAC 1 cut(s) 940
ApeKI GCWGC 2 cut(s) 104, 107
ApoI RAATTY 3 cut(s) 63, 522, 1313
Asp700I GAANNNNTTC 1 cut(s) 1296
AsuHPI GGTGA 1 cut(s) 157
BaeGI GKGCMC 1 cut(s) 944
BanII GRGCYC 1 cut(s) 1270
BbsI GAAGAC 1 cut(s) 1260
Bbv12I GWGCWC 2 cut(s) 944, 1270
BbvI GCAGC 2 cut(s) 116, 119
BccI CCATC 5 cut(s) 126, 250, 509, 790, 1243
BceAI ACGGC 1 cut(s) 76
BciVI GTATCC 2 cut(s) 128, 787
BclI TGATCA 1 cut(s) 934
BcoDI GTCTC 2 cut(s) 87, 1003
BcuI ACTAGT 1 cut(s) 113
BfaI CTAG 5 cut(s) 114, 126, 308, 543, 767
BfuAI ACCTGC 1 cut(s) 543
BfuI GTATCC 2 cut(s) 128, 787
BglII AGATCT 1 cut(s) 294
BisI GCNGC 3 cut(s) 105, 108, 137
BlsI GCNGC 3 cut(s) 106, 109, 138
BmcAI AGTACT 2 cut(s) 908, 1139
BmiI GGNNCC 1 cut(s) 478
BmsI GCATC 2 cut(s) 148, 670
BpiI GAAGAC 1 cut(s) 1260
BpmI CTGGAG 1 cut(s) 1184
BpuEI CTTGAG 4 cut(s) 275, 398, 887, 1064
BsaXI ACNNNNNCTCC 4 cut(s) 461, 491, 717, 747
Bsc4I CCNNNNNNNGG 2 cut(s) 589, 1028
Bse118I RCCGGY 2 cut(s) 815, 1021
BseGI GGATG 3 cut(s) 43, 520, 801
BseLI CCNNNNNNNGG 2 cut(s) 589, 1028
BseMII CTCAG 1 cut(s) 856
BseRI GAGGAG 1 cut(s) 738
BseSI GKGCMC 1 cut(s) 944
BseXI GCAGC 2 cut(s) 116, 119
BsgI GTGCAG 1 cut(s) 342
BshFI GGCC 2 cut(s) 815, 1025
BsiHKAI GWGCWC 2 cut(s) 944, 1270
BsiSI CCGG 2 cut(s) 816, 1022
BslFI GGGAC 2 cut(s) 257, 743
BslI CCNNNNNNNGG 2 cut(s) 589, 1028
BsmAI GTCTC 2 cut(s) 87, 1003
BsmFI GGGAC 2 cut(s) 257, 743
BsmI GAATGC 2 cut(s) 1057, 1156
BsnI GGCC 2 cut(s) 815, 1025
Bsp1286I GDGCHC 2 cut(s) 944, 1270
Bsp143I GATC 3 cut(s) 294, 304, 934
BspACI CCGC 4 cut(s) 136, 551, 761, 1154
BspANI GGCC 2 cut(s) 815, 1025
BspCNI CTCAG 1 cut(s) 855
BspLI GGNNCC 1 cut(s) 478
BspMI ACCTGC 1 cut(s) 543
BsrBI CCGCTC 1 cut(s) 553
BsrFI RCCGGY 2 cut(s) 815, 1021
BssAI RCCGGY 2 cut(s) 815, 1021
BssMI GATC 3 cut(s) 294, 304, 934
Bst4CI ACNGT 2 cut(s) 251, 849
Bst6I CTCTTC 1 cut(s) 951
BstC8I GCNNGC 1 cut(s) 976
BstDEI CTNAG 3 cut(s) 599, 842, 1227
BstF5I GGATG 3 cut(s) 43, 520, 801
BstKTI GATC 3 cut(s) 297, 307, 937
BstMAI GTCTC 2 cut(s) 87, 1003
BstMBI GATC 3 cut(s) 294, 304, 934
BstMWI GCNNNNNNNGC 1 cut(s) 136
BstNSI RCATGY 1 cut(s) 978
BstSLI GKGCMC 1 cut(s) 944
BstV1I GCAGC 2 cut(s) 116, 119
BstV2I GAAGAC 1 cut(s) 1260
BstX2I RGATCY 1 cut(s) 294
BstYI RGATCY 1 cut(s) 294
BsuI GTATCC 2 cut(s) 128, 787
BsuRI GGCC 2 cut(s) 815, 1025
BtgZI GCGATG 1 cut(s) 145
BtsCI GGATG 3 cut(s) 43, 520, 801
BtsI GCAGTG 1 cut(s) 431
BtsIMutI CAGTG 4 cut(s) 256, 431, 698, 944
BveI ACCTGC 1 cut(s) 543
Cac8I GCNNGC 1 cut(s) 976
Cfr10I RCCGGY 2 cut(s) 815, 1021
Csp6I GTAC 6 cut(s) 22, 232, 850, 874, 907, 1138
CviAII CATG 4 cut(s) 710, 932, 975, 1271
CviQI GTAC 6 cut(s) 22, 232, 850, 874, 907, 1138
DdeI CTNAG 3 cut(s) 599, 842, 1227
DpnI GATC 3 cut(s) 296, 306, 936
DpnII GATC 3 cut(s) 294, 304, 934
Eam1104I CTCTTC 1 cut(s) 951
EarI CTCTTC 1 cut(s) 951
Ecl136II GAGCTC 1 cut(s) 1268
Eco24I GRGCYC 1 cut(s) 1270
Eco53kI GAGCTC 1 cut(s) 1268
Eco57I CTGAAG 1 cut(s) 935
EcoICRI GAGCTC 1 cut(s) 1268
EcoT22I ATGCAT 1 cut(s) 1325
EcoT38I GRGCYC 1 cut(s) 1270
FaeI CATG 4 cut(s) 713, 935, 978, 1274
FaqI GGGAC 2 cut(s) 257, 743
FatI CATG 4 cut(s) 709, 931, 974, 1270
FauI CCCGC 1 cut(s) 768
FbaI TGATCA 1 cut(s) 934
FblI GTMKAC 1 cut(s) 445
Fnu4HI GCNGC 3 cut(s) 105, 108, 137
FokI GGATG 3 cut(s) 50, 527, 808
FriOI GRGCYC 1 cut(s) 1270
Fsp4HI GCNGC 3 cut(s) 105, 108, 137
FspBI CTAG 5 cut(s) 114, 126, 308, 543, 767
GluI GCNGC 3 cut(s) 105, 108, 137
GsuI CTGGAG 1 cut(s) 1184
HaeIII GGCC 2 cut(s) 815, 1025
HapII CCGG 2 cut(s) 816, 1022
Hin1II CATG 4 cut(s) 713, 935, 978, 1274
HincII GTYRAC 2 cut(s) 446, 957
HindII GTYRAC 2 cut(s) 446, 957
HindIII AAGCTT 1 cut(s) 689
HinfI GANTC 9 cut(s) 160, 173, 270, 343, 373, 578, 838, 1195, 1221
HpaI GTTAAC 1 cut(s) 957
HpaII CCGG 2 cut(s) 816, 1022
HphI GGTGA 1 cut(s) 157
Hpy166II GTNNAC 6 cut(s) 247, 446, 736, 942, 957, 1194
Hpy188I TCNGA 6 cut(s) 178, 220, 372, 747, 845, 1113
Hpy188III TCNNGA 7 cut(s) 274, 292, 308, 377, 464, 527, 1246
Hpy8I GTNNAC 6 cut(s) 247, 446, 736, 942, 957, 1194
Hpy99I CGWCG 1 cut(s) 447
HpyAV CCTTC 4 cut(s) 864, 887, 964, 1311
HpyCH4III ACNGT 2 cut(s) 251, 849
HpyCH4IV ACGT 3 cut(s) 16, 732, 1284
HpyCH4V TGCA 8 cut(s) 323, 330, 353, 623, 942, 988, 1003, 1323
HpyF10VI GCNNNNNNNGC 1 cut(s) 136
HpyF3I CTNAG 3 cut(s) 599, 842, 1227
HpySE526I ACGT 3 cut(s) 16, 732, 1284
Hsp92II CATG 4 cut(s) 713, 935, 978, 1274
Ksp22I TGATCA 1 cut(s) 934
KspAI GTTAAC 1 cut(s) 957
Kzo9I GATC 3 cut(s) 294, 304, 934
LmnI GCTCC 2 cut(s) 482, 558
LpnPI CCDG 8 cut(s) 69, 401, 548, 829, 1035, 1083, 1148, 1197
Lsp1109I GCAGC 2 cut(s) 116, 119
LweI GCATC 2 cut(s) 148, 670
MaeI CTAG 5 cut(s) 114, 126, 308, 543, 767
MaeII ACGT 3 cut(s) 16, 732, 1284
MaeIII GTNAC 1 cut(s) 650
MalI GATC 3 cut(s) 296, 306, 936
MbiI CCGCTC 1 cut(s) 553
MboI GATC 3 cut(s) 294, 304, 934
MboII GAAGA 5 cut(s) 370, 799, 938, 941, 1265
MfeI CAATTG 4 cut(s) 238, 618, 639, 830
MflI RGATCY 1 cut(s) 294
MhlI GDGCHC 2 cut(s) 944, 1270
MlyI GAGTC 4 cut(s) 154, 279, 572, 1189
MmeI TCCRAC 1 cut(s) 363
Mph1103I ATGCAT 1 cut(s) 1325
MroXI GAANNNNTTC 1 cut(s) 1296
MseI TTAA 7 cut(s) 6, 95, 333, 594, 917, 956, 1188
MslI CAYNNNNRTG 1 cut(s) 15
MspI CCGG 2 cut(s) 816, 1022
MunI CAATTG 4 cut(s) 238, 618, 639, 830
Mva1269I GAATGC 2 cut(s) 1057, 1156
MwoI GCNNNNNNNGC 1 cut(s) 136
NdeII GATC 3 cut(s) 294, 304, 934
NlaIII CATG 4 cut(s) 713, 935, 978, 1274
NlaIV GGNNCC 1 cut(s) 478
NsiI ATGCAT 1 cut(s) 1325
NspI RCATGY 1 cut(s) 978
PaeI GCATGC 1 cut(s) 978
PctI GAATGC 2 cut(s) 1057, 1156
PdmI GAANNNNTTC 1 cut(s) 1296
PfeI GAWTC 5 cut(s) 173, 343, 373, 838, 1221
PflMI CCANNNNNTGG 1 cut(s) 589
PkrI GCNGC 3 cut(s) 106, 109, 138
PleI GAGTC 4 cut(s) 154, 278, 572, 1189
PpsI GAGTC 4 cut(s) 154, 278, 572, 1189
PsiI TTATAA 1 cut(s) 432
Psp124BI GAGCTC 1 cut(s) 1270
PspN4I GGNNCC 1 cut(s) 478
PsuI RGATCY 1 cut(s) 294
RsaI GTAC 6 cut(s) 23, 233, 851, 875, 908, 1139
RsaNI GTAC 6 cut(s) 22, 232, 850, 874, 907, 1138
RseI CAYNNNNRTG 1 cut(s) 15
SacI GAGCTC 1 cut(s) 1270
SalI GTCGAC 1 cut(s) 444
SaqAI TTAA 7 cut(s) 6, 95, 333, 594, 917, 956, 1188
SatI GCNGC 3 cut(s) 105, 108, 137
Sau3AI GATC 3 cut(s) 294, 304, 934
ScaI AGTACT 2 cut(s) 908, 1139
SchI GAGTC 4 cut(s) 154, 279, 572, 1189
SduI GDGCHC 2 cut(s) 944, 1270
SfaNI GCATC 2 cut(s) 148, 670
SmiMI CAYNNNNRTG 1 cut(s) 15
SmlI CTYRAG 4 cut(s) 290, 377, 902, 1079
SmoI CTYRAG 4 cut(s) 290, 377, 902, 1079
SpeI ACTAGT 1 cut(s) 113
SphI GCATGC 1 cut(s) 978
SsiI CCGC 4 cut(s) 136, 551, 761, 1154
SspMI CTAG 5 cut(s) 114, 126, 308, 543, 767
SstI GAGCTC 1 cut(s) 1270
TaaI ACNGT 2 cut(s) 251, 849
TaiI ACGT 3 cut(s) 19, 735, 1287
TaqI TCGA 2 cut(s) 158, 445
TatI WGTACW 3 cut(s) 231, 906, 1137
TauI GCSGC 1 cut(s) 139
TfiI GAWTC 5 cut(s) 173, 343, 373, 838, 1221
Tru1I TTAA 7 cut(s) 6, 95, 333, 594, 917, 956, 1188
Tru9I TTAA 7 cut(s) 6, 95, 333, 594, 917, 956, 1188
TscAI CASTG 4 cut(s) 256, 431, 705, 944
TseI GCWGC 2 cut(s) 104, 107
TspDTI ATGAA 7 cut(s) 54, 75, 327, 983, 1064, 1132, 1140
TspRI CASTG 4 cut(s) 256, 431, 705, 944
Van91I CCANNNNNTGG 1 cut(s) 589
VneI GTGCAC 1 cut(s) 940
XapI RAATTY 3 cut(s) 63, 522, 1313
XbaI TCTAGA 1 cut(s) 307
XceI RCATGY 1 cut(s) 978
XmiI GTMKAC 1 cut(s) 445
XmnI GAANNNNTTC 1 cut(s) 1296
XspI CTAG 5 cut(s) 114, 126, 308, 543, 767
ZrmI AGTACT 2 cut(s) 908, 1139
Zsp2I ATGCAT 1 cut(s) 1325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.