Rmu_ssc0000172.1_g000019

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000172.1
OG0000095
Physical Location & Seq
Forward (+)
93953 .. 96498
2546 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000172.1_g000019.1.cds

Sequence Viewer

Length: 1209 bp
atggctctccgaacagtcagttccttgttagctatagccacaagtctacgtactaaagggaagattgatcaacacttggaggatttggagcagaagaatgattgcaaattgaggaacagaaagcaaaataatgctggaaacaagttggtggacagaatcagtgtgttgcctgatgaaattttagtcagtatactctctctattgcccctgaaggaagcacaagctactagtgttctttctaagcgatggcggcatgtgtgggcgtctattactactcttaactttgattgtgccccaaccatctttagtttcatatgcagctatatatcttccaagtactacaccctcaaatcggaagtagaaggtgaaatcagtaggtttgtcccttggatcaatagtgtggtggaacagcataatgttccatgctttgaacatttcagggtttgttctcatctaaatcaagaatttgcaagttccattgataaatgggttcaatttgcaatggcaaagggagttcgaacactggagctggacttttcagtctggggttgtgttcctccaatgtatactttcccccattaccttttgaaacacttgtgtgacgatcatattccaattcaaggcccttgtgcatgcatcggtttgaagtcccttaaggttcttaatttcaattgtgttaatgtggctggagaagttctcgagtacttcttgtctaattgtaccaggtatgtgacttactccttggttggctttcagagcttccagagaaatcgtgttcaacactacaagaaagatcttgtgtttcctgtactagcgagtctcaagcatttggaattatgtttctacacagaagatgattccattcttgttcaattaacttctttcatcaacgccagtcctaacttgcagagtcttttgttcgctttggaacctccattttctttgagaagagagataaaatataaagccgccaaatgttcccaacaacatctccgggtagtgcaactagtggcatatgatgtaggatatggtgctagcacatatcatcttgaagttgtcaaatacctgatagagagtgctgttgaacttgaaaaaatattaatcactcctaatactgacgatgaggaaaagatggacagagtaaagaaggaaattgaagaagaggagaagacattgtcctataccaatttgccttctaaagttgtatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

402

Amino Acids

46.03

Weight (kDa)

7.15

Isoelectric Point (pI)

44.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 539
AccI GTMKAC 3 cut(s) 46, 190, 566
AciI CCGC 2 cut(s) 250, 969
AclWI GGATC 1 cut(s) 398
AcsI RAATTY 2 cut(s) 177, 464
AcuI CTGAAG 1 cut(s) 230
AcyI GRCGYC 1 cut(s) 263
AfaI GTAC 5 cut(s) 52, 338, 704, 721, 810
AfiI CCNNNNNNNGG 2 cut(s) 352, 620
AflII CTTAAG 1 cut(s) 653
AhlI ACTAGT 2 cut(s) 227, 1006
AjnI CCWGG 1 cut(s) 722
AleI CACNNNNGTG 1 cut(s) 597
AluBI AGCT 5 cut(s) 32, 224, 321, 529, 759
AluI AGCT 5 cut(s) 32, 224, 321, 529, 759
Alw26I GTCTC 1 cut(s) 824
AlwI GGATC 1 cut(s) 398
Ama87I CYCGRG 1 cut(s) 698
AoxI GGCC 1 cut(s) 622
ApeKI GCWGC 1 cut(s) 318
ApoI RAATTY 2 cut(s) 177, 464
AseI ATTAAT 1 cut(s) 1100
AspS9I GGNCC 1 cut(s) 623
AsuC2I CCSGG 1 cut(s) 995
AsuHPI GGTGA 1 cut(s) 377
AsuII TTCGAA 1 cut(s) 517
AsuNHI GCTAGC 1 cut(s) 1034
AvaI CYCGRG 1 cut(s) 698
BaeGI GKGCMC 1 cut(s) 295
BbsI GAAGAC 1 cut(s) 1175
BbvI GCAGC 1 cut(s) 330
BccI CCATC 3 cut(s) 240, 308, 1126
BciT130I CCWGG 1 cut(s) 724
BclI TGATCA 1 cut(s) 67
BcnI CCSGG 1 cut(s) 995
BcoDI GTCTC 1 cut(s) 824
BcuI ACTAGT 2 cut(s) 227, 1006
BfaI CTAG 4 cut(s) 228, 812, 1007, 1035
BfmI CTRYAG 1 cut(s) 33
BfrI CTTAAG 1 cut(s) 653
BglII AGATCT 1 cut(s) 793
BisI GCNGC 3 cut(s) 251, 319, 969
BlsI GCNGC 3 cut(s) 252, 320, 970
BmcAI AGTACT 2 cut(s) 338, 704
Bme1390I CCNGG 2 cut(s) 724, 995
BmeT110I CYCGRG 1 cut(s) 698
BmgT120I GGNCC 1 cut(s) 623
BmiI GGNNCC 1 cut(s) 930
BmrFI CCNGG 2 cut(s) 724, 995
BmsI GCATC 1 cut(s) 645
BmtI GCTAGC 1 cut(s) 1038
BpiI GAAGAC 1 cut(s) 1175
BplI GAGNNNNNCTC 2 cut(s) 681, 713
BpmI CTGGAG 2 cut(s) 545, 708
Bpu14I TTCGAA 1 cut(s) 517
BpuEI CTTGAG 1 cut(s) 806
BpuMI CCSGG 1 cut(s) 995
BsaAI YACGTR 1 cut(s) 50
BsaHI GRCGYC 1 cut(s) 263
BsaJI CCNNGG 2 cut(s) 386, 741
BsaXI ACNNNNNCTCC 2 cut(s) 975, 1005
Bsc4I CCNNNNNNNGG 2 cut(s) 352, 620
Bse1I ACTGG 2 cut(s) 528, 894
Bse3DI GCAATG 1 cut(s) 507
BseBI CCWGG 1 cut(s) 724
BseDI CCNNGG 2 cut(s) 386, 741
BseLI CCNNNNNNNGG 2 cut(s) 352, 620
BseMI GCAATG 1 cut(s) 507
BseNI ACTGG 2 cut(s) 528, 894
BseRI GAGGAG 1 cut(s) 1178
BseSI GKGCMC 1 cut(s) 295
BseXI GCAGC 1 cut(s) 330
BshFI GGCC 1 cut(s) 624
BsiHKCI CYCGRG 1 cut(s) 698
BsiSI CCGG 1 cut(s) 994
BslFI GGGAC 2 cut(s) 368, 634
BslI CCNNNNNNNGG 2 cut(s) 352, 620
BsmAI GTCTC 1 cut(s) 824
BsmFI GGGAC 2 cut(s) 368, 634
BsnI GGCC 1 cut(s) 624
BsoBI CYCGRG 1 cut(s) 698
Bsp119I TTCGAA 1 cut(s) 517
Bsp1286I GDGCHC 1 cut(s) 295
Bsp143I GATC 4 cut(s) 67, 390, 604, 793
BspACI CCGC 2 cut(s) 250, 969
BspANI GGCC 1 cut(s) 624
BspLI GGNNCC 1 cut(s) 930
BspOI GCTAGC 1 cut(s) 1038
BspPI GGATC 1 cut(s) 398
BspT104I TTCGAA 1 cut(s) 517
BspTI CTTAAG 1 cut(s) 653
BsrDI GCAATG 1 cut(s) 507
BsrI ACTGG 2 cut(s) 528, 894
BssECI CCNNGG 2 cut(s) 386, 741
BssMI GATC 4 cut(s) 67, 390, 604, 793
BssNAI GTATAC 2 cut(s) 191, 567
BssNI GRCGYC 1 cut(s) 263
BssT1I CCWWGG 2 cut(s) 386, 741
Bst1107I GTATAC 2 cut(s) 191, 567
Bst2UI CCWGG 1 cut(s) 724
Bst4CI ACNGT 1 cut(s) 16
Bst6I CTCTTC 2 cut(s) 943, 1155
BstACI GRCGYC 1 cut(s) 263
BstAFI CTTAAG 1 cut(s) 653
BstBAI YACGTR 1 cut(s) 50
BstBI TTCGAA 1 cut(s) 517
BstC8I GCNNGC 2 cut(s) 634, 1036
BstDEI CTNAG 1 cut(s) 240
BstKTI GATC 4 cut(s) 70, 393, 607, 796
BstMAI GTCTC 1 cut(s) 824
BstMBI GATC 4 cut(s) 67, 390, 604, 793
BstMWI GCNNNNNNNGC 2 cut(s) 250, 756
BstNI CCWGG 1 cut(s) 724
BstNSI RCATGY 2 cut(s) 257, 636
BstSCI CCNGG 2 cut(s) 722, 993
BstSFI CTRYAG 1 cut(s) 33
BstSLI GKGCMC 1 cut(s) 295
BstSNI TACGTA 1 cut(s) 50
BstV1I GCAGC 1 cut(s) 330
BstV2I GAAGAC 1 cut(s) 1175
BstX2I RGATCY 1 cut(s) 793
BstYI RGATCY 1 cut(s) 793
BstZ17I GTATAC 2 cut(s) 191, 567
BsuRI GGCC 1 cut(s) 624
BtgZI GCGATG 1 cut(s) 259
BtsIMutI CAGTG 2 cut(s) 166, 521
Cac8I GCNNGC 2 cut(s) 634, 1036
Cfr13I GGNCC 1 cut(s) 623
CseI GACGC 1 cut(s) 252
CsiI ACCWGGT 1 cut(s) 722
Csp6I GTAC 5 cut(s) 51, 337, 703, 720, 809
CviAII CATG 3 cut(s) 254, 423, 633
CviQI GTAC 5 cut(s) 51, 337, 703, 720, 809
DdeI CTNAG 1 cut(s) 240
DpnI GATC 4 cut(s) 69, 392, 606, 795
DpnII GATC 4 cut(s) 67, 390, 604, 793
DrdI GACNNNNNNGTC 1 cut(s) 539
DseDI GACNNNNNNGTC 1 cut(s) 539
Eam1104I CTCTTC 2 cut(s) 943, 1155
EarI CTCTTC 2 cut(s) 943, 1155
Eco105I TACGTA 1 cut(s) 50
Eco130I CCWWGG 2 cut(s) 386, 741
Eco57I CTGAAG 1 cut(s) 230
Eco88I CYCGRG 1 cut(s) 698
EcoO109I RGGNCCY 1 cut(s) 623
EcoRII CCWGG 1 cut(s) 722
EcoT14I CCWWGG 2 cut(s) 386, 741
EcoT22I ATGCAT 1 cut(s) 638
ErhI CCWWGG 2 cut(s) 386, 741
FaeI CATG 3 cut(s) 257, 426, 636
FaqI GGGAC 2 cut(s) 368, 634
FatI CATG 3 cut(s) 253, 422, 632
FauNDI CATATG 2 cut(s) 314, 1015
FbaI TGATCA 1 cut(s) 67
FblI GTMKAC 3 cut(s) 46, 190, 566
Fnu4HI GCNGC 3 cut(s) 251, 319, 969
Fsp4HI GCNGC 3 cut(s) 251, 319, 969
FspBI CTAG 4 cut(s) 228, 812, 1007, 1035
GluI GCNGC 3 cut(s) 251, 319, 969
GsuI CTGGAG 2 cut(s) 545, 708
HaeIII GGCC 1 cut(s) 624
HapII CCGG 1 cut(s) 994
HgaI GACGC 1 cut(s) 252
Hin1I GRCGYC 1 cut(s) 263
Hin1II CATG 3 cut(s) 257, 426, 636
HinfI GANTC 4 cut(s) 156, 817, 857, 910
HpaII CCGG 1 cut(s) 994
HphI GGTGA 1 cut(s) 377
Hpy166II GTNNAC 4 cut(s) 47, 151, 191, 567
Hpy188I TCNGA 3 cut(s) 11, 355, 756
Hpy188III TCNNGA 4 cut(s) 461, 698, 763, 1049
Hpy8I GTNNAC 4 cut(s) 47, 151, 191, 567
HpyAV CCTTC 4 cut(s) 205, 356, 1141, 1203
HpyCH4III ACNGT 1 cut(s) 16
HpyCH4IV ACGT 1 cut(s) 49
HpyCH4V TGCA 8 cut(s) 105, 318, 470, 500, 632, 636, 907, 1003
HpyF10VI GCNNNNNNNGC 2 cut(s) 250, 756
HpyF3I CTNAG 1 cut(s) 240
HpySE526I ACGT 1 cut(s) 49
Hsp92I GRCGYC 1 cut(s) 263
Hsp92II CATG 3 cut(s) 257, 426, 636
Ksp22I TGATCA 1 cut(s) 67
Kzo9I GATC 4 cut(s) 67, 390, 604, 793
LmnI GCTCC 2 cut(s) 88, 526
Lsp1109I GCAGC 1 cut(s) 330
LweI GCATC 1 cut(s) 645
MabI ACCWGGT 1 cut(s) 722
MaeI CTAG 4 cut(s) 228, 812, 1007, 1035
MaeII ACGT 1 cut(s) 49
MaeIII GTNAC 2 cut(s) 599, 730
MalI GATC 4 cut(s) 69, 392, 606, 795
MboI GATC 4 cut(s) 67, 390, 604, 793
MboII GAAGA 8 cut(s) 73, 106, 321, 863, 960, 1169, 1172, 1180
MfeI CAATTG 1 cut(s) 670
MflI RGATCY 1 cut(s) 793
MhlI GDGCHC 1 cut(s) 295
MlyI GAGTC 2 cut(s) 826, 919
MnlI CCTC 7 cut(s) 73, 105, 356, 567, 942, 1117, 1156
Mph1103I ATGCAT 1 cut(s) 638
MseI TTAA 6 cut(s) 279, 654, 663, 678, 875, 1100
MslI CAYNNNNRTG 1 cut(s) 597
MspCI CTTAAG 1 cut(s) 653
MspI CCGG 1 cut(s) 994
MspR9I CCNGG 2 cut(s) 724, 995
MunI CAATTG 1 cut(s) 670
MvaI CCWGG 1 cut(s) 724
MwoI GCNNNNNNNGC 2 cut(s) 250, 756
NciI CCSGG 1 cut(s) 995
NdeI CATATG 2 cut(s) 314, 1015
NdeII GATC 4 cut(s) 67, 390, 604, 793
NheI GCTAGC 1 cut(s) 1034
NlaIII CATG 3 cut(s) 257, 426, 636
NlaIV GGNNCC 1 cut(s) 930
NmuCI GTSAC 2 cut(s) 599, 730
NsiI ATGCAT 1 cut(s) 638
NspI RCATGY 2 cut(s) 257, 636
NspV TTCGAA 1 cut(s) 517
OliI CACNNNNGTG 1 cut(s) 597
PaeI GCATGC 1 cut(s) 636
PaeR7I CTCGAG 1 cut(s) 698
PfeI GAWTC 2 cut(s) 156, 857
PflFI GACNNNGTC 1 cut(s) 1174
PkrI GCNGC 3 cut(s) 252, 320, 970
PleI GAGTC 2 cut(s) 825, 918
PpsI GAGTC 2 cut(s) 825, 918
Ppu21I YACGTR 1 cut(s) 50
PshBI ATTAAT 1 cut(s) 1100
Psp6I CCWGG 1 cut(s) 722
PspGI CCWGG 1 cut(s) 722
PspN4I GGNNCC 1 cut(s) 930
PspPI GGNCC 1 cut(s) 623
PsuI RGATCY 1 cut(s) 793
PsyI GACNNNGTC 1 cut(s) 1174
RsaI GTAC 5 cut(s) 52, 338, 704, 721, 810
RsaNI GTAC 5 cut(s) 51, 337, 703, 720, 809
RseI CAYNNNNRTG 1 cut(s) 597
SaqAI TTAA 6 cut(s) 279, 654, 663, 678, 875, 1100
SatI GCNGC 3 cut(s) 251, 319, 969
Sau3AI GATC 4 cut(s) 67, 390, 604, 793
Sau96I GGNCC 1 cut(s) 623
ScaI AGTACT 2 cut(s) 338, 704
SchI GAGTC 2 cut(s) 826, 919
ScrFI CCNGG 2 cut(s) 724, 995
SduI GDGCHC 1 cut(s) 295
SexAI ACCWGGT 1 cut(s) 722
SfaNI GCATC 1 cut(s) 645
SfcI CTRYAG 1 cut(s) 33
Sfr274I CTCGAG 1 cut(s) 698
SfuI TTCGAA 1 cut(s) 517
SlaI CTCGAG 1 cut(s) 698
SmiMI CAYNNNNRTG 1 cut(s) 597
SmlI CTYRAG 3 cut(s) 653, 698, 821
SmoI CTYRAG 3 cut(s) 653, 698, 821
SnaBI TACGTA 1 cut(s) 50
SpeI ACTAGT 2 cut(s) 227, 1006
SphI GCATGC 1 cut(s) 636
SsiI CCGC 2 cut(s) 250, 969
SspI AATATT 1 cut(s) 1098
SspMI CTAG 4 cut(s) 228, 812, 1007, 1035
StyD4I CCNGG 2 cut(s) 722, 993
StyI CCWWGG 2 cut(s) 386, 741
TaaI ACNGT 1 cut(s) 16
TaiI ACGT 1 cut(s) 52
TaqI TCGA 2 cut(s) 517, 699
TatI WGTACW 3 cut(s) 336, 702, 808
TauI GCSGC 2 cut(s) 253, 971
TfiI GAWTC 2 cut(s) 156, 857
Tru1I TTAA 6 cut(s) 279, 654, 663, 678, 875, 1100
Tru9I TTAA 6 cut(s) 279, 654, 663, 678, 875, 1100
TscAI CASTG 2 cut(s) 166, 528
TseFI GTSAC 2 cut(s) 599, 730
TseI GCWGC 1 cut(s) 318
Tsp45I GTSAC 2 cut(s) 599, 730
TspDTI ATGAA 3 cut(s) 189, 301, 874
TspRI CASTG 2 cut(s) 166, 528
Tth111I GACNNNGTC 1 cut(s) 1174
Vha464I CTTAAG 1 cut(s) 653
VspI ATTAAT 1 cut(s) 1100
XapI RAATTY 2 cut(s) 177, 464
XceI RCATGY 2 cut(s) 257, 636
XhoI CTCGAG 1 cut(s) 698
XmiI GTMKAC 3 cut(s) 46, 190, 566
XspI CTAG 4 cut(s) 228, 812, 1007, 1035
ZrmI AGTACT 2 cut(s) 338, 704
Zsp2I ATGCAT 1 cut(s) 638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.