Rroxscaffold_2G00138380

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000095
Physical Location & Seq
Reverse (-)
76508067 .. 76510686
2620 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00138380.1

Sequence Viewer

Length: 1383 bp
ATGGTTGAACCAAATAGCAAGGGTGGTTACAGCTTGAGAAAAAGAAAGAAGAAAGATGTTGCTGACGACATGGTCGACAGAATCAGTGGATTGCCGGATGAAATTCTTGTGAGTATACTGTCTCTGTTGCCCCTAAAGGAAGCACAAGCTACTAGTATCCTTTCTAGGAGGTGGCAGTATTTGTGGGCCTTTAGTACCAATCTCAACTTTGATGCTGAGAAAAATTTAATGAGATTGAATGAGCTCAAAGGAGAAGCGTGCGAATTGGAAATGTGTAGGTACGTCAATTGGGTGGATAGTGTGTTGAAACAGCATAGAGCCTTAAACATTGAGCGATTCAGGGTTTATTTTAAACTGGGTCCTAGAATTTGTATTGATGAATGGATTCAATTTGCAATGAGGAAAGGAGTTCAAATGCTTGAGTTGGACTTCTCTGCATATATTCGTTGTCTATTGATTGGGAAATACAGATTTAGTAACAAACTGTTAGGTATCAGCGAAACCTCTGGTTTGAAGTCCTTGTGTTCTGAATACATTGGTTTTAAGTGCCTCAAAGTTTTTGATTTGAAATCAGTTGATGTAGACCAAGAAGTTCTTGAGTACTTCATTTCAAACTGTCCAGTTCTCGAACGACTGGTCGTGTATGGTTCCTCATCATTGGTTAATTTGAGAGTTGTTGGGCATTCAATTGCATTGAAGTACTTGGTGATACAAAGATGTGAAAATATCAAAACCATTCAAATTTGTGATGCAAATCTAGTTTCATTCTGTTATGATGGATTTGTGAGAAACTTGGTTCTTAGTAATCTTCCACTACTTGTTGAGGTTTCCATTGTTGGATGGTTGCCACATGATTTCTTAGAGATTACCTTCTTTCACCTGTCCTGCTGTCTTTCTCAACTGGAGATTCTCAATCTCAATTATATGAAAGCGTGTTGTGAAAGGGATCCTGTAATTCCTTCATTACCTAATCTCAAGCGTTTGGAATTAGCAATTTTTGAAACTGAAAATTTTGCTCTTCTTCATCTCGCATCTTTCATAAAGAAAGCTCCTTACATGCATACACTTGTGTTGCGGTTATCACAATCATGGAGTAAAAAAAGTCCCTTTGCCAAGAAGACAGCCGCAAAATGCTCCCATGATCGTCTAAAGGTGGTGGAAATAGTAGGGTACAGCGGCCTCAGCCGTCAGATTGAACTTGTAATGTACTTGACAAGAACTGCAAGTAATCTGGAGAAAATTGTTTTTGATCCTGTTAATTCTTGGAGGCCAAGATTTGACAGACTACAAGATCTTGTAGTGGAGAAGGAAGAATTGTCAAGAGCTCAGGCCCAGCAGCTTAAAAGAAAATTGCCTGCAACTCTAGAAGTTGTGTGCCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

460

Amino Acids

52.97

Weight (kDa)

8.86

Isoelectric Point (pI)

38.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 28 - 62 9.2e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 101 - 423 1.7e-30 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 125 - 251 1.2e-09 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 71
AccI GTMKAC 3 cut(s) 75, 115, 582
AciI CCGC 3 cut(s) 1075, 1125, 1176
AclWI GGATC 3 cut(s) 941, 954, 1244
AcsI RAATTY 5 cut(s) 102, 223, 366, 741, 1009
AfaI GTAC 6 cut(s) 196, 281, 602, 701, 1172, 1208
AhlI ACTAGT 1 cut(s) 152
AluBI AGCT 6 cut(s) 33, 149, 244, 1049, 1325, 1339
AluI AGCT 6 cut(s) 33, 149, 244, 1049, 1325, 1339
Alw21I GWGCWC 2 cut(s) 246, 1327
Alw26I GTCTC 1 cut(s) 126
AlwI GGATC 3 cut(s) 941, 954, 1244
AoxI GGCC 4 cut(s) 186, 1177, 1268, 1329
ApeKI GCWGC 1 cut(s) 1336
ApoI RAATTY 5 cut(s) 102, 223, 366, 741, 1009
ArsI GACNNNNNNTTYG 2 cut(s) 621, 653
Asp700I GAANNNNTTC 1 cut(s) 384
AspS9I GGNCC 3 cut(s) 186, 359, 1330
AsuHPI GGTGA 2 cut(s) 718, 869
AvaII GGWCC 1 cut(s) 359
BamHI GGATCC 1 cut(s) 946
BanII GRGCYC 2 cut(s) 246, 1327
BbsI GAAGAC 1 cut(s) 1124
Bbv12I GWGCWC 2 cut(s) 246, 1327
BbvCI CCTCAGC 1 cut(s) 1181
BbvI GCAGC 1 cut(s) 1348
BccI CCATC 2 cut(s) 770, 834
BceAI ACGGC 1 cut(s) 1170
BciVI GTATCC 1 cut(s) 167
BcoDI GTCTC 1 cut(s) 126
BcuI ACTAGT 1 cut(s) 152
BfaI CTAG 5 cut(s) 153, 165, 363, 758, 1364
BfmI CTRYAG 1 cut(s) 1379
BfuI GTATCC 1 cut(s) 167
BglII AGATCT 1 cut(s) 1291
BisI GCNGC 3 cut(s) 1125, 1177, 1337
BlsI GCNGC 3 cut(s) 1126, 1178, 1338
BmcAI AGTACT 2 cut(s) 602, 701
Bme18I GGWCC 1 cut(s) 359
BmgT120I GGNCC 3 cut(s) 186, 359, 1330
BmiI GGNNCC 3 cut(s) 360, 649, 948
BmrI ACTGGG 1 cut(s) 365
BmsI GCATC 3 cut(s) 202, 739, 1040
BmuI ACTGGG 1 cut(s) 365
BpiI GAAGAC 1 cut(s) 1124
BpmI CTGGAG 2 cut(s) 923, 1253
Bpu10I CCTNAGC 2 cut(s) 1181, 1326
BpuEI CTTGAG 4 cut(s) 55, 440, 617, 959
BsaBI GATNNNNATC 1 cut(s) 753
Bse1I ACTGG 4 cut(s) 360, 620, 639, 906
Bse3DI GCAATG 1 cut(s) 402
Bse8I GATNNNNATC 1 cut(s) 753
BseGI GGATG 2 cut(s) 103, 845
BseJI GATNNNNATC 1 cut(s) 753
BseMI GCAATG 1 cut(s) 402
BseMII CTCAG 3 cut(s) 207, 1195, 1340
BseNI ACTGG 4 cut(s) 360, 620, 639, 906
BseXI GCAGC 1 cut(s) 1348
BseYI CCCAGC 1 cut(s) 1332
BshFI GGCC 4 cut(s) 188, 1179, 1270, 1331
BsiHKAI GWGCWC 2 cut(s) 246, 1327
BsiSI CCGG 1 cut(s) 95
BslFI GGGAC 1 cut(s) 1089
BsmAI GTCTC 1 cut(s) 126
BsmFI GGGAC 1 cut(s) 1089
BsmI GAATGC 1 cut(s) 682
BsnI GGCC 4 cut(s) 188, 1179, 1270, 1331
Bsp1286I GDGCHC 2 cut(s) 246, 1327
Bsp143I GATC 4 cut(s) 946, 1141, 1249, 1291
BspACI CCGC 3 cut(s) 1075, 1125, 1176
BspANI GGCC 4 cut(s) 188, 1179, 1270, 1331
BspCNI CTCAG 3 cut(s) 208, 1194, 1339
BspLI GGNNCC 3 cut(s) 360, 649, 948
BspPI GGATC 3 cut(s) 941, 954, 1244
BspQI GCTCTTC 1 cut(s) 1023
BsrDI GCAATG 1 cut(s) 402
BsrI ACTGG 4 cut(s) 360, 620, 639, 906
BssMI GATC 4 cut(s) 946, 1141, 1249, 1291
BssNAI GTATAC 1 cut(s) 116
Bst1107I GTATAC 1 cut(s) 116
Bst4CI ACNGT 3 cut(s) 120, 486, 617
Bst6I CTCTTC 1 cut(s) 1023
BstC8I GCNNGC 2 cut(s) 259, 1356
BstDEI CTNAG 5 cut(s) 216, 800, 859, 1181, 1326
BstF5I GGATG 2 cut(s) 103, 845
BstKTI GATC 4 cut(s) 949, 1144, 1252, 1294
BstMAI GTCTC 1 cut(s) 126
BstMBI GATC 4 cut(s) 946, 1141, 1249, 1291
BstMWI GCNNNNNNNGC 1 cut(s) 1182
BstNSI RCATGY 1 cut(s) 1060
BstSFI CTRYAG 1 cut(s) 1379
BstV1I GCAGC 1 cut(s) 1348
BstV2I GAAGAC 1 cut(s) 1124
BstX2I RGATCY 2 cut(s) 946, 1291
BstYI RGATCY 2 cut(s) 946, 1291
BstZ17I GTATAC 1 cut(s) 116
BsuI GTATCC 1 cut(s) 167
BsuRI GGCC 4 cut(s) 188, 1179, 1270, 1331
BtsCI GGATG 2 cut(s) 103, 845
BtsIMutI CAGTG 1 cut(s) 91
Cac8I GCNNGC 2 cut(s) 259, 1356
Cfr13I GGNCC 3 cut(s) 186, 359, 1330
Csp6I GTAC 6 cut(s) 195, 280, 601, 700, 1171, 1207
CviAII CATG 5 cut(s) 70, 851, 1057, 1089, 1139
CviQI GTAC 6 cut(s) 195, 280, 601, 700, 1171, 1207
DdeI CTNAG 5 cut(s) 216, 800, 859, 1181, 1326
DpnI GATC 4 cut(s) 948, 1143, 1251, 1293
DpnII GATC 4 cut(s) 946, 1141, 1249, 1291
DraI TTTAAA 1 cut(s) 352
DrdI GACNNNNNNGTC 1 cut(s) 71
DseDI GACNNNNNNGTC 1 cut(s) 71
Eam1104I CTCTTC 1 cut(s) 1023
EarI CTCTTC 1 cut(s) 1023
Ecl136II GAGCTC 2 cut(s) 244, 1325
Eco24I GRGCYC 2 cut(s) 246, 1327
Eco47I GGWCC 1 cut(s) 359
Eco53kI GAGCTC 2 cut(s) 244, 1325
EcoICRI GAGCTC 2 cut(s) 244, 1325
EcoO109I RGGNCCY 1 cut(s) 359
EcoT22I ATGCAT 1 cut(s) 1062
EcoT38I GRGCYC 2 cut(s) 246, 1327
FaeI CATG 5 cut(s) 73, 854, 1060, 1092, 1142
FalI AAGNNNNNCTT 2 cut(s) 579, 611
FaqI GGGAC 1 cut(s) 1089
FatI CATG 5 cut(s) 69, 850, 1056, 1088, 1138
FblI GTMKAC 3 cut(s) 75, 115, 582
Fnu4HI GCNGC 3 cut(s) 1125, 1177, 1337
FokI GGATG 2 cut(s) 110, 852
FriOI GRGCYC 2 cut(s) 246, 1327
Fsp4HI GCNGC 3 cut(s) 1125, 1177, 1337
FspBI CTAG 5 cut(s) 153, 165, 363, 758, 1364
GluI GCNGC 3 cut(s) 1125, 1177, 1337
GsaI CCCAGC 1 cut(s) 1336
GsuI CTGGAG 2 cut(s) 923, 1253
HaeIII GGCC 4 cut(s) 188, 1179, 1270, 1331
HapII CCGG 1 cut(s) 95
Hin1II CATG 5 cut(s) 73, 854, 1060, 1092, 1142
HincII GTYRAC 1 cut(s) 76
HindII GTYRAC 1 cut(s) 76
HinfI GANTC 4 cut(s) 81, 336, 385, 907
HpaII CCGG 1 cut(s) 95
HphI GGTGA 2 cut(s) 718, 869
Hpy166II GTNNAC 3 cut(s) 76, 116, 583
Hpy188I TCNGA 2 cut(s) 529, 1191
Hpy188III TCNNGA 5 cut(s) 596, 626, 1232, 1320, 1364
Hpy8I GTNNAC 3 cut(s) 76, 116, 583
HpyAV CCTTC 3 cut(s) 880, 969, 1300
HpyCH4III ACNGT 3 cut(s) 120, 486, 617
HpyCH4IV ACGT 1 cut(s) 282
HpyCH4V TGCA 7 cut(s) 395, 437, 692, 752, 1060, 1223, 1358
HpyF10VI GCNNNNNNNGC 1 cut(s) 1182
HpyF3I CTNAG 5 cut(s) 216, 800, 859, 1181, 1326
HpySE526I ACGT 1 cut(s) 282
Hsp92II CATG 5 cut(s) 73, 854, 1060, 1092, 1142
Kzo9I GATC 4 cut(s) 946, 1141, 1249, 1291
LguI GCTCTTC 1 cut(s) 1023
LmnI GCTCC 2 cut(s) 1054, 1139
Lsp1109I GCAGC 1 cut(s) 1348
LweI GCATC 3 cut(s) 202, 739, 1040
MaeI CTAG 5 cut(s) 153, 165, 363, 758, 1364
MaeII ACGT 1 cut(s) 282
MaeIII GTNAC 2 cut(s) 26, 476
MalI GATC 4 cut(s) 948, 1143, 1251, 1293
MboI GATC 4 cut(s) 946, 1141, 1249, 1291
MboII GAAGA 6 cut(s) 61, 800, 1010, 1013, 1129, 1322
MfeI CAATTG 2 cut(s) 286, 687
MflI RGATCY 2 cut(s) 946, 1291
MhlI GDGCHC 2 cut(s) 246, 1327
MmeI TCCRAC 2 cut(s) 405, 817
MnlI CCTC 8 cut(s) 162, 393, 514, 560, 661, 817, 1190, 1260
Mph1103I ATGCAT 1 cut(s) 1062
MroXI GAANNNNTTC 1 cut(s) 384
MseI TTAA 7 cut(s) 227, 323, 351, 543, 663, 1257, 1341
MslI CAYNNNNRTG 1 cut(s) 1087
MspA1I CMGCKG 1 cut(s) 1176
MspI CCGG 1 cut(s) 95
MunI CAATTG 2 cut(s) 286, 687
Mva1269I GAATGC 1 cut(s) 682
MwoI GCNNNNNNNGC 1 cut(s) 1182
NdeII GATC 4 cut(s) 946, 1141, 1249, 1291
NlaIII CATG 5 cut(s) 73, 854, 1060, 1092, 1142
NlaIV GGNNCC 3 cut(s) 360, 649, 948
NsiI ATGCAT 1 cut(s) 1062
NspI RCATGY 1 cut(s) 1060
PciSI GCTCTTC 1 cut(s) 1023
PcsI WCGNNNNNNNCGW 1 cut(s) 72
PctI GAATGC 1 cut(s) 682
PdmI GAANNNNTTC 1 cut(s) 384
PfeI GAWTC 4 cut(s) 81, 336, 385, 907
PflFI GACNNNGTC 1 cut(s) 71
PkrI GCNGC 3 cut(s) 1126, 1178, 1338
PpuMI RGGWCCY 1 cut(s) 359
Psp124BI GAGCTC 2 cut(s) 246, 1327
Psp5II RGGWCCY 1 cut(s) 359
PspFI CCCAGC 1 cut(s) 1332
PspN4I GGNNCC 3 cut(s) 360, 649, 948
PspPI GGNCC 3 cut(s) 186, 359, 1330
PspPPI RGGWCCY 1 cut(s) 359
PsuI RGATCY 2 cut(s) 946, 1291
PsyI GACNNNGTC 1 cut(s) 71
RsaI GTAC 6 cut(s) 196, 281, 602, 701, 1172, 1208
RsaNI GTAC 6 cut(s) 195, 280, 601, 700, 1171, 1207
RseI CAYNNNNRTG 1 cut(s) 1087
SacI GAGCTC 2 cut(s) 246, 1327
SalI GTCGAC 1 cut(s) 74
SapI GCTCTTC 1 cut(s) 1023
SaqAI TTAA 7 cut(s) 227, 323, 351, 543, 663, 1257, 1341
SatI GCNGC 3 cut(s) 1125, 1177, 1337
Sau3AI GATC 4 cut(s) 946, 1141, 1249, 1291
Sau96I GGNCC 3 cut(s) 186, 359, 1330
ScaI AGTACT 2 cut(s) 602, 701
SduI GDGCHC 2 cut(s) 246, 1327
SfaNI GCATC 3 cut(s) 202, 739, 1040
SfcI CTRYAG 1 cut(s) 1379
SinI GGWCC 1 cut(s) 359
SmiMI CAYNNNNRTG 1 cut(s) 1087
SmlI CTYRAG 4 cut(s) 34, 419, 596, 974
SmoI CTYRAG 4 cut(s) 34, 419, 596, 974
SpeI ACTAGT 1 cut(s) 152
SsiI CCGC 3 cut(s) 1075, 1125, 1176
SspMI CTAG 5 cut(s) 153, 165, 363, 758, 1364
SstI GAGCTC 2 cut(s) 246, 1327
TaaI ACNGT 3 cut(s) 120, 486, 617
TaiI ACGT 1 cut(s) 285
TaqI TCGA 2 cut(s) 75, 627
TatI WGTACW 3 cut(s) 600, 699, 1206
TauI GCSGC 2 cut(s) 1127, 1179
TfiI GAWTC 4 cut(s) 81, 336, 385, 907
Tru1I TTAA 7 cut(s) 227, 323, 351, 543, 663, 1257, 1341
Tru9I TTAA 7 cut(s) 227, 323, 351, 543, 663, 1257, 1341
TscAI CASTG 1 cut(s) 91
TseI GCWGC 1 cut(s) 1336
TspDTI ATGAA 8 cut(s) 114, 393, 595, 753, 941, 951, 1013, 1027
TspRI CASTG 1 cut(s) 91
Tth111I GACNNNGTC 1 cut(s) 71
VpaK11BI GGWCC 1 cut(s) 359
XapI RAATTY 5 cut(s) 102, 223, 366, 741, 1009
XbaI TCTAGA 1 cut(s) 1363
XceI RCATGY 1 cut(s) 1060
XmiI GTMKAC 3 cut(s) 75, 115, 582
XmnI GAANNNNTTC 1 cut(s) 384
XspI CTAG 5 cut(s) 153, 165, 363, 758, 1364
ZrmI AGTACT 2 cut(s) 602, 701
Zsp2I ATGCAT 1 cut(s) 1062
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.