Rorug02G0484800

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000095
Physical Location & Seq
Reverse (-)
61458779 .. 61461436
2658 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0484800.1

Sequence Viewer

Length: 2205 bp
ATGGATGTTGTGCAGCTTTTACTTCATATTACTCTGTTCTTGTGGTGTGTCAGTATTAATACTGCTACAGTAGCAGCAGCACCACAACAAATCTTAATAGCAAAGCCTAATTGTCCATCACATTGTGGAAATATTTCAATCCCATATCCTTTTGGAATTGGACCAGGTTGTTATGTAGATAACTGGTTCGAAATACTGTGTAATGAGTCAGTCAGCCCACCCAAACCTTTCTTGAACCGCACCACTCTGAATCTTGAGGTACTGGAAATTTCTATTGCAGGAACACTAAAAGTCAGAAACCCGATTACGGTCTCTGATAATTGCAGTGATAAGCCAATTCGGCAAGCAGCCAACTTGGGGGCAAGCCCTTTTGCGTTCTCTCAAAAGAACAAATTCACAGTAGTTGGTTGTGGTGTTATGGCTGGGCTGAATTCTAGCTCAGATGACTTGACTATCTCGGCTACGTGCTTGTCCCAGTGTGAAATTGCCTCCAATGCAAGCAGTACCTGCAATGGTTTGGATTGCAGCCAGGTCTCTATCCCTTCCTTTCTTTCTACCTTCCATACCAGTTTCATATCTACAACAAATCCATGCAATTATGCATTCTTGGCAGACCAGGACTGGTTTCAGTCGTTTACGAATTTAACTAATATCTCTGCCAGAATTAGTGATATGGATTATGTGCCTGCCGTGTTGGAATGGGGCTTATATCATTCGATCCTCGATGTATTTGGAACCTCTTCAATCGCTTCTGATAGATCTGTTAACTGCCTGGAAAAAAGTGACACCTCTTCAACATATAGTTCCTCAAGGCTGGAATGTTTCTGTGCAACGGGCTTTGAAGGAAACCCCTATCTCATTGAAGGATGTCAAGATATAAATGAATGCTTGGCTCGAAACCGGCAGTGTCCTGTGGACTATGCTTGTAAGAATCATCCTGGATATGCCGAATGCTACTATCCAAAGAGAAAGTCCGCAGTTAAACTGGCCTTTATAGTTATCGGTAGCGTTCTTGGACTACTGTTTCTACTCGGTGTTGCTTGGTGGTTGCACAAAGCCATAAAGAAAAGGAAGAACATAAAGCAGAAGGAGAAGTTTTTTAAACAAAATGGTGGTTTATTGTTGGAGCAACAACTATTATCTGGTGAAGTAAATGTCGACAAAATTAAGTTGTTCAATTCGAAGGAGTTAGACAAAGCTACTGACCACTTTAATGTGGACAGAATTCTTGGCCAAGGAGGCCAAGGTACGGTTTACAAAGGAATGCTGGAAGATGGAAGAATTGTTGCTGTAAAGCAGTCTAAAAAACTTGTTGGAGGTGAAGGTGGAAATTTCATTAATGAAATTGTCATTCTTTCACAAATTAACCATAGGAATGTGGTCAAGTTATTGGGGTGCTGTTTAGAGACGGAAGTTCCTCTTTTGGTTTATGAATTCATACTTAATGGAACACTTTCTCAGTATATTCATCACCATAATGAGGAGTTTCCTCTCACTTGGGAAATGCGCTTACGGGTGTCGATGGAAATTGCAGGAGCTATTTCGTACTTACATTCATCTGCTTCCATGCCTATATACCACAGAGACATCAAGTCTTCTAACATACTATTGGATGATAAGTATAGAGCCAAAGTAGCAGACTTTGGAACATCAAGATCTATTGCCATTGATAAGACACACCTTACCACACGAGTACAAGGAACATTTGGTTATCTAGACCCAGAATATTTCCAATCCAGTCAATTTACTGACAAGAGTGATGTTTATAGCTTTGGAGTGGTCCTTGCTGAGCTCTTGACAGGACAAAAACCAATTTCTCCGACAACCTCAGATGAATGGAGAAGCCTAGCAAACCATTTCATTCTTTCAATGGAAGGAAATTGCCTATTCGATATTCTCGATACTCGAGTTAGAAGTGATGGTCGGGAAGAAGAAATTGTGGCAGTTGCTAACCTTGCAAAAAGATGCTTAAATTTGAACGGGAGAAAACGACCTACTATGAAAGAAGTTGCTGTGGAGTTGGAGGGAATCCAATTGTCGGTTAAAGCTCATTCTGATGCTCAACAAAACTTCTCAGAGATTGGGTATGATCGAACTAATGGAATGACCGAGGCTTGGGATGTTCGTTCTACATCAACAGGGTTATCATGTATGGATGGTACTACAGGTTCTTCATTAGATGCACAACCTCTGCTGTCCTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

734

Amino Acids

81.05

Weight (kDa)

5.94

Isoelectric Point (pI)

38.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 38 - 98 1.5e-11 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 404 - 670 6.1e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 406 - 673 1.6e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 515
AccI GTMKAC 1 cut(s) 1158
AciI CCGC 2 cut(s) 238, 975
AclWI GGATC 1 cut(s) 712
AcoI YGGCCR 1 cut(s) 1231
AcsI RAATTY 8 cut(s) 267, 392, 430, 640, 1224, 1330, 1433, 1972
AdeI CACNNNGTG 1 cut(s) 125
AfaI GTAC 6 cut(s) 261, 505, 1249, 1547, 1695, 2161
AfiI CCNNNNNNNGG 6 cut(s) 307, 357, 1249, 1480, 2038, 2115
AgsI TTSAA 9 cut(s) 138, 235, 744, 795, 842, 863, 1177, 1869, 1978
AhdI GACNNNNNGTC 1 cut(s) 1591
AjnI CCWGG 5 cut(s) 163, 528, 615, 771, 937
AluBI AGCT 7 cut(s) 16, 438, 1199, 1538, 1770, 1792, 2048
AluI AGCT 7 cut(s) 16, 438, 1199, 1538, 1770, 1792, 2048
Alw21I GWGCWC 1 cut(s) 1794
Alw26I GTCTC 4 cut(s) 316, 538, 1400, 1578
AlwI GGATC 1 cut(s) 712
AlwNI CAGNNNCTG 1 cut(s) 507
Ama87I CYCGRG 1 cut(s) 1905
AoxI GGCC 3 cut(s) 987, 1231, 1240
ApeKI GCWGC 5 cut(s) 13, 74, 77, 347, 525
ApoI RAATTY 8 cut(s) 267, 392, 430, 640, 1224, 1330, 1433, 1972
ArsI GACNNNNNNTTYG 2 cut(s) 956, 988
AseI ATTAAT 2 cut(s) 57, 1338
Asp700I GAANNNNTTC 4 cut(s) 133, 392, 739, 1453
AspLEI GCGC 1 cut(s) 1509
AspS9I GGNCC 2 cut(s) 161, 1780
AsuHPI GGTGA 3 cut(s) 1157, 1331, 1463
AsuII TTCGAA 2 cut(s) 189, 1181
AvaI CYCGRG 1 cut(s) 1905
AvaII GGWCC 2 cut(s) 161, 1780
BaeI ACNNNNGTAYC 2 cut(s) 1893, 1926
BalI TGGCCA 1 cut(s) 1233
BanII GRGCYC 1 cut(s) 1794
BauI CACGAG 1 cut(s) 1689
BbsI GAAGAC 1 cut(s) 1587
Bbv12I GWGCWC 1 cut(s) 1794
BbvI GCAGC 5 cut(s) 25, 86, 89, 359, 537
BccI CCATC 5 cut(s) 124, 1268, 1516, 1913, 2150
BceAI ACGGC 1 cut(s) 674
BciT130I CCWGG 5 cut(s) 165, 530, 617, 773, 939
BcoDI GTCTC 4 cut(s) 316, 538, 1400, 1578
BfaI CTAG 3 cut(s) 435, 1715, 1847
BfmI CTRYAG 2 cut(s) 66, 2163
BfuAI ACCTGC 1 cut(s) 515
BglI GCCNNNNNGGC 2 cut(s) 340, 1239
BglII AGATCT 2 cut(s) 758, 1655
BisI GCNGC 5 cut(s) 14, 75, 78, 348, 526
BlpI GCTNAGC 1 cut(s) 1788
BlsI GCNGC 5 cut(s) 15, 76, 79, 349, 527
Bme1390I CCNGG 5 cut(s) 165, 530, 617, 773, 939
Bme18I GGWCC 2 cut(s) 161, 1780
BmeRI GACNNNNNGTC 1 cut(s) 1591
BmeT110I CYCGRG 1 cut(s) 1905
BmgT120I GGNCC 2 cut(s) 161, 1780
BmiI GGNNCC 1 cut(s) 736
BmrFI CCNGG 5 cut(s) 165, 530, 617, 773, 939
BmrI ACTGGG 1 cut(s) 469
BmsI GCATC 3 cut(s) 1955, 2047, 2170
BmuI ACTGGG 1 cut(s) 469
BpiI GAAGAC 1 cut(s) 1587
Bpu1102I GCTNAGC 1 cut(s) 1788
Bpu14I TTCGAA 2 cut(s) 189, 1181
BpuEI CTTGAG 2 cut(s) 275, 793
BsaAI YACGTR 1 cut(s) 465
BsaI GGTCTC 2 cut(s) 316, 538
BsaJI CCNNGG 3 cut(s) 1234, 1243, 2109
Bsc4I CCNNNNNNNGG 6 cut(s) 307, 357, 1249, 1480, 2038, 2115
Bse118I RCCGGY 1 cut(s) 900
Bse1I ACTGG 7 cut(s) 188, 267, 475, 567, 626, 990, 1737
Bse3DI GCAATG 1 cut(s) 517
BseBI CCWGG 5 cut(s) 165, 530, 617, 773, 939
BseDI CCNNGG 3 cut(s) 1234, 1243, 2109
BseGI GGATG 6 cut(s) 10, 872, 934, 1618, 2125, 2161
BseLI CCNNNNNNNGG 6 cut(s) 307, 357, 1249, 1480, 2038, 2115
BseMI GCAATG 1 cut(s) 517
BseMII CTCAG 5 cut(s) 453, 1472, 1779, 1842, 2088
BseNI ACTGG 7 cut(s) 188, 267, 475, 567, 626, 990, 1737
BseRI GAGGAG 1 cut(s) 1496
BseXI GCAGC 5 cut(s) 25, 86, 89, 359, 537
BseYI CCCAGC 1 cut(s) 422
BsgI GTGCAG 1 cut(s) 32
BshFI GGCC 3 cut(s) 989, 1233, 1242
BsiHKAI GWGCWC 1 cut(s) 1794
BsiHKCI CYCGRG 1 cut(s) 1905
BsiSI CCGG 1 cut(s) 901
BslFI GGGAC 1 cut(s) 457
BslI CCNNNNNNNGG 6 cut(s) 307, 357, 1249, 1480, 2038, 2115
BsmAI GTCTC 4 cut(s) 316, 538, 1400, 1578
BsmBI CGTCTC 1 cut(s) 1400
BsmFI GGGAC 1 cut(s) 457
BsmI GAATGC 4 cut(s) 602, 890, 956, 1269
BsnI GGCC 3 cut(s) 989, 1233, 1242
Bso31I GGTCTC 2 cut(s) 316, 538
BsoBI CYCGRG 1 cut(s) 1905
Bsp119I TTCGAA 2 cut(s) 189, 1181
Bsp1286I GDGCHC 1 cut(s) 1794
Bsp143I GATC 4 cut(s) 717, 758, 1655, 2089
Bsp1720I GCTNAGC 1 cut(s) 1788
BspACI CCGC 2 cut(s) 238, 975
BspANI GGCC 3 cut(s) 989, 1233, 1242
BspCNI CTCAG 5 cut(s) 452, 1471, 1780, 1841, 2087
BspLI GGNNCC 1 cut(s) 736
BspMI ACCTGC 1 cut(s) 515
BspPI GGATC 1 cut(s) 712
BspT104I TTCGAA 2 cut(s) 189, 1181
BspTNI GGTCTC 2 cut(s) 316, 538
BsrDI GCAATG 1 cut(s) 517
BsrFI RCCGGY 1 cut(s) 900
BsrI ACTGG 7 cut(s) 188, 267, 475, 567, 626, 990, 1737
BssAI RCCGGY 1 cut(s) 900
BssECI CCNNGG 3 cut(s) 1234, 1243, 2109
BssMI GATC 4 cut(s) 717, 758, 1655, 2089
BssSI CACGAG 1 cut(s) 1689
BssT1I CCWWGG 2 cut(s) 1234, 1243
Bst2BI CACGAG 1 cut(s) 1689
Bst2UI CCWGG 5 cut(s) 165, 530, 617, 773, 939
Bst4CI ACNGT 6 cut(s) 70, 198, 310, 400, 1023, 1252
Bst6I CTCTTC 2 cut(s) 745, 796
BstAPI GCANNNNNTGC 1 cut(s) 507
BstBAI YACGTR 1 cut(s) 465
BstBI TTCGAA 2 cut(s) 189, 1181
BstC8I GCNNGC 4 cut(s) 345, 364, 499, 687
BstDEI CTNAG 5 cut(s) 439, 1458, 1788, 1828, 2074
BstF5I GGATG 6 cut(s) 10, 872, 934, 1618, 2125, 2161
BstHHI GCGC 1 cut(s) 1509
BstKTI GATC 4 cut(s) 720, 761, 1658, 2092
BstMAI GTCTC 4 cut(s) 316, 538, 1400, 1578
BstMBI GATC 4 cut(s) 717, 758, 1655, 2089
BstMWI GCNNNNNNNGC 8 cut(s) 71, 340, 494, 507, 608, 1239, 1634, 1955
BstNI CCWGG 5 cut(s) 165, 530, 617, 773, 939
BstSCI CCNGG 5 cut(s) 163, 528, 615, 771, 937
BstSFI CTRYAG 2 cut(s) 66, 2163
BstV1I GCAGC 5 cut(s) 25, 86, 89, 359, 537
BstV2I GAAGAC 1 cut(s) 1587
BstX2I RGATCY 2 cut(s) 758, 1655
BstYI RGATCY 2 cut(s) 758, 1655
BsuRI GGCC 3 cut(s) 989, 1233, 1242
BtsCI GGATG 6 cut(s) 10, 872, 934, 1618, 2125, 2161
BtsI GCAGTG 2 cut(s) 331, 911
BtsIMutI CAGTG 3 cut(s) 331, 482, 911
BveI ACCTGC 1 cut(s) 515
Cac8I GCNNGC 4 cut(s) 345, 364, 499, 687
CaiI CAGNNNCTG 1 cut(s) 507
CfoI GCGC 1 cut(s) 1509
Cfr10I RCCGGY 1 cut(s) 900
Cfr13I GGNCC 2 cut(s) 161, 1780
CsiI ACCWGGT 1 cut(s) 163
Csp6I GTAC 6 cut(s) 260, 504, 1248, 1546, 1694, 2160
CviAII CATG 3 cut(s) 591, 1567, 2148
CviQI GTAC 6 cut(s) 260, 504, 1248, 1546, 1694, 2160
DdeI CTNAG 5 cut(s) 439, 1458, 1788, 1828, 2074
DpnI GATC 4 cut(s) 719, 760, 1657, 2091
DpnII GATC 4 cut(s) 717, 758, 1655, 2089
DraI TTTAAA 1 cut(s) 1102
DraIII CACNNNGTG 1 cut(s) 125
DriI GACNNNNNGTC 1 cut(s) 1591
EaeI YGGCCR 1 cut(s) 1231
Eam1104I CTCTTC 2 cut(s) 745, 796
Eam1105I GACNNNNNGTC 1 cut(s) 1591
EarI CTCTTC 2 cut(s) 745, 796
Ecl136II GAGCTC 1 cut(s) 1792
Eco130I CCWWGG 2 cut(s) 1234, 1243
Eco24I GRGCYC 1 cut(s) 1794
Eco31I GGTCTC 2 cut(s) 316, 538
Eco47I GGWCC 2 cut(s) 161, 1780
Eco53kI GAGCTC 1 cut(s) 1792
Eco88I CYCGRG 1 cut(s) 1905
EcoICRI GAGCTC 1 cut(s) 1792
EcoRI GAATTC 3 cut(s) 430, 1224, 1433
EcoRII CCWGG 5 cut(s) 163, 528, 615, 771, 937
EcoT14I CCWWGG 2 cut(s) 1234, 1243
EcoT22I ATGCAT 1 cut(s) 604
EcoT38I GRGCYC 1 cut(s) 1794
ErhI CCWWGG 2 cut(s) 1234, 1243
Esp3I CGTCTC 1 cut(s) 1400
FaeI CATG 3 cut(s) 594, 1570, 2151
FalI AAGNNNNNCTT 2 cut(s) 1404, 1436
FaqI GGGAC 1 cut(s) 457
FatI CATG 3 cut(s) 590, 1566, 2147
FblI GTMKAC 1 cut(s) 1158
Fnu4HI GCNGC 5 cut(s) 14, 75, 78, 348, 526
FokI GGATG 6 cut(s) 17, 879, 921, 1625, 2132, 2168
FriOI GRGCYC 1 cut(s) 1794
Fsp4HI GCNGC 5 cut(s) 14, 75, 78, 348, 526
FspBI CTAG 3 cut(s) 435, 1715, 1847
GlaI GCGC 1 cut(s) 1508
GluI GCNGC 5 cut(s) 14, 75, 78, 348, 526
GsaI CCCAGC 1 cut(s) 426
HaeIII GGCC 3 cut(s) 989, 1233, 1242
HapII CCGG 1 cut(s) 901
HhaI GCGC 1 cut(s) 1509
Hin1II CATG 3 cut(s) 594, 1570, 2151
Hin6I GCGC 1 cut(s) 1507
HinP1I GCGC 1 cut(s) 1507
HincII GTYRAC 2 cut(s) 766, 1159
HindII GTYRAC 2 cut(s) 766, 1159
HinfI GANTC 4 cut(s) 206, 250, 931, 2028
HpaI GTTAAC 1 cut(s) 766
HpaII CCGG 1 cut(s) 901
HphI GGTGA 3 cut(s) 1157, 1331, 1463
Hpy166II GTNNAC 6 cut(s) 636, 766, 916, 1159, 1219, 1255
Hpy188I TCNGA 9 cut(s) 249, 296, 316, 442, 754, 1821, 1831, 2056, 2077
Hpy188III TCNNGA 8 cut(s) 232, 254, 872, 1653, 1715, 1795, 1898, 1925
Hpy8I GTNNAC 6 cut(s) 636, 766, 916, 1159, 1219, 1255
HpyAV CCTTC 8 cut(s) 552, 568, 836, 857, 1081, 1177, 1316, 1868
HpyCH4III ACNGT 6 cut(s) 70, 198, 310, 400, 1023, 1252
HpyCH4IV ACGT 1 cut(s) 464
HpyF10VI GCNNNNNNNGC 8 cut(s) 71, 340, 494, 507, 608, 1239, 1634, 1955
HpyF3I CTNAG 5 cut(s) 439, 1458, 1788, 1828, 2074
HpySE526I ACGT 1 cut(s) 464
Hsp92II CATG 3 cut(s) 594, 1570, 2151
HspAI GCGC 1 cut(s) 1507
KspAI GTTAAC 1 cut(s) 766
Kzo9I GATC 4 cut(s) 717, 758, 1655, 2089
LmnI GCTCC 2 cut(s) 1126, 1535
Lsp1109I GCAGC 5 cut(s) 25, 86, 89, 359, 537
LweI GCATC 3 cut(s) 1955, 2047, 2170
MabI ACCWGGT 1 cut(s) 163
MaeI CTAG 3 cut(s) 435, 1715, 1847
MaeII ACGT 1 cut(s) 464
MaeIII GTNAC 1 cut(s) 782
MalI GATC 4 cut(s) 719, 760, 1657, 2091
MboI GATC 4 cut(s) 717, 758, 1655, 2089
MboII GAAGA 9 cut(s) 732, 783, 1084, 1283, 1290, 1587, 1940, 1943, 2163
MfeI CAATTG 1 cut(s) 2033
MflI RGATCY 2 cut(s) 758, 1655
MhlI GDGCHC 1 cut(s) 1794
MlsI TGGCCA 1 cut(s) 1233
MluNI TGGCCA 1 cut(s) 1233
MlyI GAGTC 1 cut(s) 215
MmeI TCCRAC 5 cut(s) 675, 1104, 1294, 1844, 2001
Mox20I TGGCCA 1 cut(s) 1233
Mph1103I ATGCAT 1 cut(s) 604
MroXI GAANNNNTTC 4 cut(s) 133, 392, 739, 1453
MscI TGGCCA 1 cut(s) 1233
MslI CAYNNNNRTG 4 cut(s) 1212, 1374, 1476, 2055
Msp20I TGGCCA 1 cut(s) 1233
MspI CCGG 1 cut(s) 901
MspR9I CCNGG 5 cut(s) 165, 530, 617, 773, 939
MunI CAATTG 1 cut(s) 2033
Mva1269I GAATGC 4 cut(s) 602, 890, 956, 1269
MvaI CCWGG 5 cut(s) 165, 530, 617, 773, 939
MwoI GCNNNNNNNGC 8 cut(s) 71, 340, 494, 507, 608, 1239, 1634, 1955
NdeII GATC 4 cut(s) 717, 758, 1655, 2089
NlaIII CATG 3 cut(s) 594, 1570, 2151
NlaIV GGNNCC 1 cut(s) 736
NmeAIII GCCGAG 1 cut(s) 437
NmuCI GTSAC 1 cut(s) 782
NsiI ATGCAT 1 cut(s) 604
NspV TTCGAA 2 cut(s) 189, 1181
PaeR7I CTCGAG 1 cut(s) 1905
PcsI WCGNNNNNNNCGW 1 cut(s) 1896
PctI GAATGC 4 cut(s) 602, 890, 956, 1269
PdmI GAANNNNTTC 4 cut(s) 133, 392, 739, 1453
PfeI GAWTC 3 cut(s) 250, 931, 2028
PfoI TCCNGGA 1 cut(s) 937
PkrI GCNGC 5 cut(s) 15, 76, 79, 349, 527
PleI GAGTC 1 cut(s) 214
PpsI GAGTC 1 cut(s) 214
Ppu21I YACGTR 1 cut(s) 465
PshBI ATTAAT 2 cut(s) 57, 1338
Psp124BI GAGCTC 1 cut(s) 1794
Psp6I CCWGG 5 cut(s) 163, 528, 615, 771, 937
PspFI CCCAGC 1 cut(s) 422
PspGI CCWGG 5 cut(s) 163, 528, 615, 771, 937
PspN4I GGNNCC 1 cut(s) 736
PspPI GGNCC 2 cut(s) 161, 1780
PspXI VCTCGAGB 1 cut(s) 1905
PsrI GAACNNNNNNTAC 2 cut(s) 2152, 2184
PstNI CAGNNNCTG 1 cut(s) 507
PsuI RGATCY 2 cut(s) 758, 1655
RsaI GTAC 6 cut(s) 261, 505, 1249, 1547, 1695, 2161
RsaNI GTAC 6 cut(s) 260, 504, 1248, 1546, 1694, 2160
RseI CAYNNNNRTG 4 cut(s) 1212, 1374, 1476, 2055
SacI GAGCTC 1 cut(s) 1794
SalI GTCGAC 1 cut(s) 1157
SatI GCNGC 5 cut(s) 14, 75, 78, 348, 526
Sau3AI GATC 4 cut(s) 717, 758, 1655, 2089
Sau96I GGNCC 2 cut(s) 161, 1780
SchI GAGTC 1 cut(s) 215
ScrFI CCNGG 5 cut(s) 165, 530, 617, 773, 939
SduI GDGCHC 1 cut(s) 1794
SexAI ACCWGGT 1 cut(s) 163
SfaNI GCATC 3 cut(s) 1955, 2047, 2170
SfcI CTRYAG 2 cut(s) 66, 2163
SfiI GGCCNNNNNGGCC 1 cut(s) 1239
Sfr274I CTCGAG 1 cut(s) 1905
SfuI TTCGAA 2 cut(s) 189, 1181
SinI GGWCC 2 cut(s) 161, 1780
SlaI CTCGAG 1 cut(s) 1905
SmiMI CAYNNNNRTG 4 cut(s) 1212, 1374, 1476, 2055
SmlI CTYRAG 3 cut(s) 254, 808, 1905
SmoI CTYRAG 3 cut(s) 254, 808, 1905
SsiI CCGC 2 cut(s) 238, 975
SspI AATATT 2 cut(s) 133, 1727
SspMI CTAG 3 cut(s) 435, 1715, 1847
SstI GAGCTC 1 cut(s) 1794
StyD4I CCNGG 5 cut(s) 163, 528, 615, 771, 937
StyI CCWWGG 2 cut(s) 1234, 1243
TaaI ACNGT 6 cut(s) 70, 198, 310, 400, 1023, 1252
TaiI ACGT 1 cut(s) 467
TaqII GACCGA 1 cut(s) 2123
TatI WGTACW 1 cut(s) 1693
TfiI GAWTC 3 cut(s) 250, 931, 2028
TscAI CASTG 3 cut(s) 331, 482, 911
TseFI GTSAC 1 cut(s) 782
TseI GCWGC 5 cut(s) 13, 74, 77, 347, 525
Tsp45I GTSAC 1 cut(s) 782
TspGWI ACGGA 1 cut(s) 1424
TspRI CASTG 3 cut(s) 331, 482, 911
VpaK11BI GGWCC 2 cut(s) 161, 1780
VspI ATTAAT 2 cut(s) 57, 1338
XapI RAATTY 8 cut(s) 267, 392, 430, 640, 1224, 1330, 1433, 1972
XbaI TCTAGA 1 cut(s) 1714
XhoI CTCGAG 1 cut(s) 1905
XmiI GTMKAC 1 cut(s) 1158
XmnI GAANNNNTTC 4 cut(s) 133, 392, 739, 1453
XspI CTAG 3 cut(s) 435, 1715, 1847
Zsp2I ATGCAT 1 cut(s) 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.