Rw5G017160

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000095
Physical Location & Seq
Reverse (-)
21915367 .. 21917316
1950 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G017160.1

Sequence Viewer

Length: 1518 bp
ATGAAGAAAAGGGTGCGCCAACCGACTTCTCAATCTGTCAAAGACGAGAATGATTGCAAATTGAGGAACAGAAAGCAAAATAATGCTGGAAACAAGTTGGTGGACAGAATCAGTGTGTTGCCTGATGAAATTTTAGTCAGTATACTCTCTCTATTGCCCCTGAAGGAAGCACAAGCTACTAGTGTTCTTTCTAAGCGATGGCGGCATGTGTGGGCGTCTATTACTACTCTTAACTTTGATTGTGCCCCAACCATCTTTAGTTTCATATGCAGCTATATATCTTCCAAGTACTACACCCTCAAATCGGAAGTAGAAGGTGAAATCAGTAGGTTTGTCCCTTGGATCAATAGTGTGGTGGAACAGCATAATGTTCCATGCATTGAACATTTCAGGGTTTGTTCTCATCTAAATCAAGAATTTGCAAGTTCCATTGATAAATGGGTTCAATTTGCAATGGAAAAGGGAGTTCGAACACTGGAGCTGGACTTTTCAGTCTGGGGTTTTGTTCCTCCAATGTATACTTTCCCCCATTACCTTTTGAAGCACTTGTGTGATGATCATATTCCAATTCAAGGCCCTTGTGCATGCATCGGTTTGAAGTCCCTTAAGGTTCTTAATTTCAATTGTGTTGATGTGGCTGGAGAAGTTCTCGAGTACTTCTTGTCTAATTGTACCGTTCTTGAACAACTATTAGTGTGTGAGTCCCCATCCTTGAATGGTCTAAGAGTTGTTGGTTCATCGGTTGCATTGAAGTACCTACTCATACAAGACTGTAGCAACATCAAAAGCATTGAGATTTATGATGCGAAACTCATTTCATTTATATACAAGGGAAAGCATGTGAACCTGCTTCTTAGAAATGTACCGCTGCTTGTGGAGGTATCAATTTGTATGCCTTCCCATAAAGATCGCATAGAGGTTGCCTTCGCTCAACTCTCATGCTGTCTTTCTCAGTTAAAGATCCTCAAACTAAATCATATAGGGAGCTGGAAGAGAAATCGTGTTCAACACTACAAGAAAGATCTTGTGTTTCCTGTACTAGCAAGTCTCAAGCATTTGGAATTATGTTTCTACACAGAAGATGATTCCATTCTTGTTCAATTAACTTCTTTCATCAACGCCAGTCCTAACTTGCAGAGTCTTTTGTTCGCTTTGGAACCACCATTTTCTTCGAGAAGAGACATAAAATATAAAGCCGCCAAATGTTCCCATCAACATCTCCAGGTAGTGCAACTAGTGGCATATGATGTAGGATACGGTGCTAGCACATATCATCTTGAAGTTGTCAAATACCTAATAGAGAGTGCTGTTGAACTTGAAAAAATCTTAATTACTCCTAATACTGAAGATGAGGAAAAGAAGGACAGAGTAAAGAAGGAAATTGAAGAAGAGGAGAAGAAACAGAAGGCAAGAAATCATTCTAGAAACCAGCTTATACAAAGAGCTCCTTTAACCATAGCTTTTGTTAAATATATTAAGTATTGTGAGACGAAGTCCAAATTTGCGTGCCTGTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

505

Amino Acids

57.91

Weight (kDa)

8.68

Isoelectric Point (pI)

51.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 37 - 73 1e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 133 - 491 4.6e-24 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 144 - 271 1.8e-07 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 491
Acc36I ACCTGC 1 cut(s) 855
AccI GTMKAC 2 cut(s) 142, 518
AciI CCGC 3 cut(s) 202, 866, 1197
AclWI GGATC 2 cut(s) 350, 955
AcsI RAATTY 3 cut(s) 129, 416, 1499
AcuI CTGAAG 2 cut(s) 182, 1365
AcyI GRCGYC 1 cut(s) 215
AfaI GTAC 6 cut(s) 290, 656, 673, 755, 864, 1038
AfiI CCNNNNNNNGG 2 cut(s) 304, 572
AflII CTTAAG 1 cut(s) 605
AhlI ACTAGT 2 cut(s) 179, 1234
AjnI CCWGG 1 cut(s) 1221
AleI CACNNNNGTG 1 cut(s) 549
AluBI AGCT 7 cut(s) 176, 273, 481, 987, 1432, 1445, 1460
AluI AGCT 7 cut(s) 176, 273, 481, 987, 1432, 1445, 1460
Alw21I GWGCWC 1 cut(s) 1447
Alw26I GTCTC 3 cut(s) 1052, 1173, 1481
AlwI GGATC 2 cut(s) 350, 955
Ama87I CYCGRG 1 cut(s) 650
AoxI GGCC 1 cut(s) 574
ApeKI GCWGC 2 cut(s) 270, 868
ApoI RAATTY 3 cut(s) 129, 416, 1499
Asp700I GAANNNNTTC 1 cut(s) 1417
AspLEI GCGC 1 cut(s) 18
AspS9I GGNCC 1 cut(s) 575
AsuHPI GGTGA 1 cut(s) 329
AsuII TTCGAA 1 cut(s) 469
AsuNHI GCTAGC 1 cut(s) 1262
AvaI CYCGRG 1 cut(s) 650
BaeGI GKGCMC 1 cut(s) 247
BanII GRGCYC 1 cut(s) 1447
Bbv12I GWGCWC 1 cut(s) 1447
BbvI GCAGC 2 cut(s) 282, 855
BccI CCATC 4 cut(s) 192, 260, 715, 1218
BciT130I CCWGG 1 cut(s) 1223
BciVI GTATCC 1 cut(s) 1247
BclI TGATCA 1 cut(s) 556
BcoDI GTCTC 3 cut(s) 1052, 1173, 1481
BcuI ACTAGT 2 cut(s) 179, 1234
BfaI CTAG 5 cut(s) 180, 1040, 1235, 1263, 1422
BfmI CTRYAG 1 cut(s) 772
BfrI CTTAAG 1 cut(s) 605
BfuAI ACCTGC 1 cut(s) 855
BfuI GTATCC 1 cut(s) 1247
BglII AGATCT 1 cut(s) 1021
BisI GCNGC 4 cut(s) 203, 271, 869, 1197
BlsI GCNGC 4 cut(s) 204, 272, 870, 1198
BmcAI AGTACT 2 cut(s) 290, 656
Bme1390I CCNGG 1 cut(s) 1223
BmeT110I CYCGRG 1 cut(s) 650
BmgT120I GGNCC 1 cut(s) 575
BmiI GGNNCC 1 cut(s) 1158
BmrFI CCNGG 1 cut(s) 1223
BmsI GCATC 2 cut(s) 597, 793
BmtI GCTAGC 1 cut(s) 1266
BplI GAGNNNNNCTC 2 cut(s) 633, 665
BpmI CTGGAG 3 cut(s) 497, 660, 1205
Bpu14I TTCGAA 1 cut(s) 469
BpuEI CTTGAG 1 cut(s) 1034
BsaHI GRCGYC 1 cut(s) 215
BsaJI CCNNGG 1 cut(s) 338
Bsc4I CCNNNNNNNGG 2 cut(s) 304, 572
Bse1I ACTGG 2 cut(s) 480, 1122
Bse3DI GCAATG 1 cut(s) 459
BseBI CCWGG 1 cut(s) 1223
BseDI CCNNGG 1 cut(s) 338
BseGI GGATG 1 cut(s) 707
BseLI CCNNNNNNNGG 2 cut(s) 304, 572
BseMI GCAATG 1 cut(s) 459
BseMII CTCAG 1 cut(s) 965
BseNI ACTGG 2 cut(s) 480, 1122
BseRI GAGGAG 1 cut(s) 1406
BseSI GKGCMC 1 cut(s) 247
BseXI GCAGC 2 cut(s) 282, 855
BshFI GGCC 1 cut(s) 576
BsiHKAI GWGCWC 1 cut(s) 1447
BsiHKCI CYCGRG 1 cut(s) 650
BslFI GGGAC 3 cut(s) 320, 586, 688
BslI CCNNNNNNNGG 2 cut(s) 304, 572
BsmAI GTCTC 3 cut(s) 1052, 1173, 1481
BsmBI CGTCTC 1 cut(s) 1481
BsmFI GGGAC 3 cut(s) 320, 586, 688
BsnI GGCC 1 cut(s) 576
BsoBI CYCGRG 1 cut(s) 650
Bsp119I TTCGAA 1 cut(s) 469
Bsp1286I GDGCHC 2 cut(s) 247, 1447
Bsp143I GATC 5 cut(s) 342, 556, 907, 960, 1021
BspACI CCGC 3 cut(s) 202, 866, 1197
BspANI GGCC 1 cut(s) 576
BspCNI CTCAG 1 cut(s) 964
BspLI GGNNCC 1 cut(s) 1158
BspMI ACCTGC 1 cut(s) 855
BspOI GCTAGC 1 cut(s) 1266
BspPI GGATC 2 cut(s) 350, 955
BspT104I TTCGAA 1 cut(s) 469
BspTI CTTAAG 1 cut(s) 605
BsrDI GCAATG 1 cut(s) 459
BsrI ACTGG 2 cut(s) 480, 1122
BssECI CCNNGG 1 cut(s) 338
BssMI GATC 5 cut(s) 342, 556, 907, 960, 1021
BssNAI GTATAC 2 cut(s) 143, 519
BssNI GRCGYC 1 cut(s) 215
BssT1I CCWWGG 1 cut(s) 338
Bst1107I GTATAC 2 cut(s) 143, 519
Bst2UI CCWGG 1 cut(s) 1223
Bst4CI ACNGT 3 cut(s) 676, 773, 1259
Bst6I CTCTTC 3 cut(s) 986, 1171, 1383
BstACI GRCGYC 1 cut(s) 215
BstAFI CTTAAG 1 cut(s) 605
BstBI TTCGAA 1 cut(s) 469
BstC8I GCNNGC 3 cut(s) 586, 1264, 1507
BstDEI CTNAG 4 cut(s) 192, 722, 854, 951
BstF5I GGATG 1 cut(s) 707
BstHHI GCGC 1 cut(s) 18
BstKTI GATC 5 cut(s) 345, 559, 910, 963, 1024
BstMAI GTCTC 3 cut(s) 1052, 1173, 1481
BstMBI GATC 5 cut(s) 342, 556, 907, 960, 1021
BstMWI GCNNNNNNNGC 1 cut(s) 202
BstNI CCWGG 1 cut(s) 1223
BstNSI RCATGY 3 cut(s) 209, 588, 842
BstSCI CCNGG 1 cut(s) 1221
BstSFI CTRYAG 1 cut(s) 772
BstSLI GKGCMC 1 cut(s) 247
BstV1I GCAGC 2 cut(s) 282, 855
BstX2I RGATCY 2 cut(s) 960, 1021
BstYI RGATCY 2 cut(s) 960, 1021
BstZ17I GTATAC 2 cut(s) 143, 519
BsuI GTATCC 1 cut(s) 1247
BsuRI GGCC 1 cut(s) 576
BtgZI GCGATG 1 cut(s) 211
BtsCI GGATG 1 cut(s) 707
BtsIMutI CAGTG 2 cut(s) 118, 473
BveI ACCTGC 1 cut(s) 855
Cac8I GCNNGC 3 cut(s) 586, 1264, 1507
CfoI GCGC 1 cut(s) 18
Cfr13I GGNCC 1 cut(s) 575
CseI GACGC 1 cut(s) 204
Csp6I GTAC 6 cut(s) 289, 655, 672, 754, 863, 1037
CviAII CATG 5 cut(s) 206, 375, 585, 839, 939
CviQI GTAC 6 cut(s) 289, 655, 672, 754, 863, 1037
DdeI CTNAG 4 cut(s) 192, 722, 854, 951
DpnI GATC 5 cut(s) 344, 558, 909, 962, 1023
DpnII GATC 5 cut(s) 342, 556, 907, 960, 1021
DrdI GACNNNNNNGTC 1 cut(s) 491
DseDI GACNNNNNNGTC 1 cut(s) 491
Eam1104I CTCTTC 3 cut(s) 986, 1171, 1383
EarI CTCTTC 3 cut(s) 986, 1171, 1383
Ecl136II GAGCTC 1 cut(s) 1445
Eco130I CCWWGG 1 cut(s) 338
Eco24I GRGCYC 1 cut(s) 1447
Eco53kI GAGCTC 1 cut(s) 1445
Eco57I CTGAAG 2 cut(s) 182, 1365
Eco88I CYCGRG 1 cut(s) 650
EcoICRI GAGCTC 1 cut(s) 1445
EcoO109I RGGNCCY 1 cut(s) 575
EcoRII CCWGG 1 cut(s) 1221
EcoT14I CCWWGG 1 cut(s) 338
EcoT22I ATGCAT 2 cut(s) 380, 590
EcoT38I GRGCYC 1 cut(s) 1447
ErhI CCWWGG 1 cut(s) 338
Esp3I CGTCTC 1 cut(s) 1481
FaeI CATG 5 cut(s) 209, 378, 588, 842, 942
FalI AAGNNNNNCTT 2 cut(s) 1432, 1464
FaqI GGGAC 3 cut(s) 320, 586, 688
FatI CATG 5 cut(s) 205, 374, 584, 838, 938
FauNDI CATATG 2 cut(s) 266, 1243
FbaI TGATCA 1 cut(s) 556
FblI GTMKAC 2 cut(s) 142, 518
Fnu4HI GCNGC 4 cut(s) 203, 271, 869, 1197
FokI GGATG 1 cut(s) 694
FriOI GRGCYC 1 cut(s) 1447
Fsp4HI GCNGC 4 cut(s) 203, 271, 869, 1197
FspBI CTAG 5 cut(s) 180, 1040, 1235, 1263, 1422
GlaI GCGC 1 cut(s) 17
GluI GCNGC 4 cut(s) 203, 271, 869, 1197
GsuI CTGGAG 3 cut(s) 497, 660, 1205
HaeIII GGCC 1 cut(s) 576
HgaI GACGC 1 cut(s) 204
HhaI GCGC 1 cut(s) 18
Hin1I GRCGYC 1 cut(s) 215
Hin1II CATG 5 cut(s) 209, 378, 588, 842, 942
Hin6I GCGC 1 cut(s) 16
HinP1I GCGC 1 cut(s) 16
HinfI GANTC 4 cut(s) 108, 701, 1085, 1138
HphI GGTGA 1 cut(s) 329
Hpy166II GTNNAC 4 cut(s) 103, 143, 519, 844
Hpy188I TCNGA 1 cut(s) 307
Hpy188III TCNNGA 6 cut(s) 413, 650, 680, 1173, 1277, 1422
Hpy8I GTNNAC 4 cut(s) 103, 143, 519, 844
HpyAV CCTTC 7 cut(s) 157, 308, 906, 934, 1354, 1369, 1399
HpyCH4III ACNGT 3 cut(s) 676, 773, 1259
HpyF10VI GCNNNNNNNGC 1 cut(s) 202
HpyF3I CTNAG 4 cut(s) 192, 722, 854, 951
Hsp92I GRCGYC 1 cut(s) 215
Hsp92II CATG 5 cut(s) 209, 378, 588, 842, 942
HspAI GCGC 1 cut(s) 16
Ksp22I TGATCA 1 cut(s) 556
Kzo9I GATC 5 cut(s) 342, 556, 907, 960, 1021
LmnI GCTCC 3 cut(s) 478, 984, 1450
Lsp1109I GCAGC 2 cut(s) 282, 855
LweI GCATC 2 cut(s) 597, 793
MaeI CTAG 5 cut(s) 180, 1040, 1235, 1263, 1422
MalI GATC 5 cut(s) 344, 558, 909, 962, 1023
MboI GATC 5 cut(s) 342, 556, 907, 960, 1021
MfeI CAATTG 1 cut(s) 622
MflI RGATCY 2 cut(s) 960, 1021
MhlI GDGCHC 2 cut(s) 247, 1447
MlyI GAGTC 2 cut(s) 710, 1147
MnlI CCTC 8 cut(s) 57, 308, 519, 871, 910, 974, 1345, 1384
Mph1103I ATGCAT 2 cut(s) 380, 590
MroXI GAANNNNTTC 1 cut(s) 1417
MseI TTAA 9 cut(s) 231, 606, 615, 956, 1103, 1328, 1451, 1467, 1476
MslI CAYNNNNRTG 1 cut(s) 549
MspA1I CMGCKG 1 cut(s) 868
MspCI CTTAAG 1 cut(s) 605
MspR9I CCNGG 1 cut(s) 1223
MunI CAATTG 1 cut(s) 622
MvaI CCWGG 1 cut(s) 1223
MwoI GCNNNNNNNGC 1 cut(s) 202
NdeI CATATG 2 cut(s) 266, 1243
NdeII GATC 5 cut(s) 342, 556, 907, 960, 1021
NheI GCTAGC 1 cut(s) 1262
NlaIII CATG 5 cut(s) 209, 378, 588, 842, 942
NlaIV GGNNCC 1 cut(s) 1158
NsiI ATGCAT 2 cut(s) 380, 590
NspI RCATGY 3 cut(s) 209, 588, 842
NspV TTCGAA 1 cut(s) 469
OliI CACNNNNGTG 1 cut(s) 549
PaeI GCATGC 1 cut(s) 588
PaeR7I CTCGAG 1 cut(s) 650
PdmI GAANNNNTTC 1 cut(s) 1417
PfeI GAWTC 2 cut(s) 108, 1085
PflFI GACNNNGTC 1 cut(s) 1492
PkrI GCNGC 4 cut(s) 204, 272, 870, 1198
PleI GAGTC 2 cut(s) 709, 1146
PpsI GAGTC 2 cut(s) 709, 1146
Psp124BI GAGCTC 1 cut(s) 1447
Psp6I CCWGG 1 cut(s) 1221
PspGI CCWGG 1 cut(s) 1221
PspN4I GGNNCC 1 cut(s) 1158
PspPI GGNCC 1 cut(s) 575
PsuI RGATCY 2 cut(s) 960, 1021
PsyI GACNNNGTC 1 cut(s) 1492
RsaI GTAC 6 cut(s) 290, 656, 673, 755, 864, 1038
RsaNI GTAC 6 cut(s) 289, 655, 672, 754, 863, 1037
RseI CAYNNNNRTG 1 cut(s) 549
SacI GAGCTC 1 cut(s) 1447
SaqAI TTAA 9 cut(s) 231, 606, 615, 956, 1103, 1328, 1451, 1467, 1476
SatI GCNGC 4 cut(s) 203, 271, 869, 1197
Sau3AI GATC 5 cut(s) 342, 556, 907, 960, 1021
Sau96I GGNCC 1 cut(s) 575
ScaI AGTACT 2 cut(s) 290, 656
SchI GAGTC 2 cut(s) 710, 1147
ScrFI CCNGG 1 cut(s) 1223
SduI GDGCHC 2 cut(s) 247, 1447
SfaNI GCATC 2 cut(s) 597, 793
SfcI CTRYAG 1 cut(s) 772
Sfr274I CTCGAG 1 cut(s) 650
SfuI TTCGAA 1 cut(s) 469
SlaI CTCGAG 1 cut(s) 650
SmiMI CAYNNNNRTG 1 cut(s) 549
SmlI CTYRAG 3 cut(s) 605, 650, 1049
SmoI CTYRAG 3 cut(s) 605, 650, 1049
SpeI ACTAGT 2 cut(s) 179, 1234
SphI GCATGC 1 cut(s) 588
SsiI CCGC 3 cut(s) 202, 866, 1197
SspMI CTAG 5 cut(s) 180, 1040, 1235, 1263, 1422
SstI GAGCTC 1 cut(s) 1447
StyD4I CCNGG 1 cut(s) 1221
StyI CCWWGG 1 cut(s) 338
TaaI ACNGT 3 cut(s) 676, 773, 1259
TaqI TCGA 3 cut(s) 469, 651, 1172
TatI WGTACW 3 cut(s) 288, 654, 1036
TauI GCSGC 2 cut(s) 205, 1199
TfiI GAWTC 2 cut(s) 108, 1085
Tru1I TTAA 9 cut(s) 231, 606, 615, 956, 1103, 1328, 1451, 1467, 1476
Tru9I TTAA 9 cut(s) 231, 606, 615, 956, 1103, 1328, 1451, 1467, 1476
TscAI CASTG 2 cut(s) 118, 480
TseI GCWGC 2 cut(s) 270, 868
TspDTI ATGAA 6 cut(s) 17, 141, 253, 726, 807, 1102
TspRI CASTG 2 cut(s) 118, 480
Tth111I GACNNNGTC 1 cut(s) 1492
Vha464I CTTAAG 1 cut(s) 605
XapI RAATTY 3 cut(s) 129, 416, 1499
XbaI TCTAGA 1 cut(s) 1421
XceI RCATGY 3 cut(s) 209, 588, 842
XhoI CTCGAG 1 cut(s) 650
XmiI GTMKAC 2 cut(s) 142, 518
XmnI GAANNNNTTC 1 cut(s) 1417
XspI CTAG 5 cut(s) 180, 1040, 1235, 1263, 1422
ZrmI AGTACT 2 cut(s) 290, 656
Zsp2I ATGCAT 2 cut(s) 380, 590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.