LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| F-box | PF00646 | 41 - 76 | 3.3e-07 | F-box domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 501, 633 |
| AclWI | GGATC | 1 cut(s) | 123 |
| AcyI | GRCGYC | 2 cut(s) | 498, 630 |
| AfaI | GTAC | 2 cut(s) | 104, 230 |
| AgsI | TTSAA | 3 cut(s) | 251, 292, 487 |
| AhlI | ACTAGT | 1 cut(s) | 191 |
| AluBI | AGCT | 4 cut(s) | 188, 310, 443, 597 |
| AluI | AGCT | 4 cut(s) | 188, 310, 443, 597 |
| Alw26I | GTCTC | 3 cut(s) | 199, 469, 596 |
| AlwI | GGATC | 1 cut(s) | 123 |
| ApeKI | GCWGC | 4 cut(s) | 182, 185, 535, 635 |
| AspLEI | GCGC | 2 cut(s) | 288, 565 |
| BbsI | GAAGAC | 2 cut(s) | 45, 422 |
| BbvI | GCAGC | 4 cut(s) | 194, 197, 522, 647 |
| BccI | CCATC | 3 cut(s) | 204, 417, 665 |
| BcoDI | GTCTC | 3 cut(s) | 199, 469, 596 |
| BcuI | ACTAGT | 1 cut(s) | 191 |
| BfaI | CTAG | 3 cut(s) | 192, 377, 519 |
| BfoI | RGCGCY | 2 cut(s) | 289, 566 |
| BisI | GCNGC | 4 cut(s) | 183, 186, 536, 636 |
| BlsI | GCNGC | 4 cut(s) | 184, 187, 537, 637 |
| BpiI | GAAGAC | 2 cut(s) | 45, 422 |
| BpmI | CTGGAG | 2 cut(s) | 407, 587 |
| Bpu10I | CCTNAGC | 1 cut(s) | 311 |
| BsaAI | YACGTR | 1 cut(s) | 337 |
| BsaHI | GRCGYC | 2 cut(s) | 498, 630 |
| BsaWI | WCCGGW | 1 cut(s) | 662 |
| Bse3DI | GCAATG | 1 cut(s) | 128 |
| BseGI | GGATG | 2 cut(s) | 142, 409 |
| BseMI | GCAATG | 1 cut(s) | 128 |
| BseMII | CTCAG | 1 cut(s) | 607 |
| BseRI | GAGGAG | 1 cut(s) | 530 |
| BseXI | GCAGC | 4 cut(s) | 194, 197, 522, 647 |
| BsgI | GTGCAG | 1 cut(s) | 560 |
| BsiSI | CCGG | 2 cut(s) | 134, 663 |
| BsmAI | GTCTC | 3 cut(s) | 199, 469, 596 |
| BsmBI | CGTCTC | 1 cut(s) | 199 |
| BsmI | GAATGC | 1 cut(s) | 512 |
| Bsp143I | GATC | 1 cut(s) | 115 |
| BspCNI | CTCAG | 1 cut(s) | 606 |
| BspPI | GGATC | 1 cut(s) | 123 |
| BspQI | GCTCTTC | 1 cut(s) | 317 |
| BsrDI | GCAATG | 1 cut(s) | 128 |
| BssMI | GATC | 1 cut(s) | 115 |
| BssNI | GRCGYC | 2 cut(s) | 498, 630 |
| Bst4CI | ACNGT | 1 cut(s) | 13 |
| Bst6I | CTCTTC | 2 cut(s) | 317, 548 |
| BstACI | GRCGYC | 2 cut(s) | 498, 630 |
| BstBAI | YACGTR | 1 cut(s) | 337 |
| BstC8I | GCNNGC | 1 cut(s) | 510 |
| BstDEI | CTNAG | 3 cut(s) | 109, 311, 593 |
| BstEII | GGTNACC | 1 cut(s) | 665 |
| BstF5I | GGATG | 2 cut(s) | 142, 409 |
| BstH2I | RGCGCY | 2 cut(s) | 289, 566 |
| BstHHI | GCGC | 2 cut(s) | 288, 565 |
| BstKTI | GATC | 1 cut(s) | 118 |
| BstMAI | GTCTC | 3 cut(s) | 199, 469, 596 |
| BstMBI | GATC | 1 cut(s) | 115 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 644 |
| BstPI | GGTNACC | 1 cut(s) | 665 |
| BstV1I | GCAGC | 4 cut(s) | 194, 197, 522, 647 |
| BstV2I | GAAGAC | 2 cut(s) | 45, 422 |
| BtsCI | GGATG | 2 cut(s) | 142, 409 |
| BtsIMutI | CAGTG | 1 cut(s) | 130 |
| Cac8I | GCNNGC | 1 cut(s) | 510 |
| CfoI | GCGC | 2 cut(s) | 288, 565 |
| Csp6I | GTAC | 2 cut(s) | 103, 229 |
| CviAII | CATG | 3 cut(s) | 235, 329, 451 |
| CviJI | RGCY | 8 cut(s) | 17, 188, 310, 327, 443, 458, 597, 638 |
| CviKI_1 | RGCY | 8 cut(s) | 17, 188, 310, 327, 443, 458, 597, 638 |
| CviQI | GTAC | 2 cut(s) | 103, 229 |
| DdeI | CTNAG | 3 cut(s) | 109, 311, 593 |
| DpnI | GATC | 1 cut(s) | 117 |
| DpnII | GATC | 1 cut(s) | 115 |
| Eam1104I | CTCTTC | 2 cut(s) | 317, 548 |
| EarI | CTCTTC | 2 cut(s) | 317, 548 |
| Eco91I | GGTNACC | 1 cut(s) | 665 |
| EcoO65I | GGTNACC | 1 cut(s) | 665 |
| EcoT22I | ATGCAT | 1 cut(s) | 367 |
| Esp3I | CGTCTC | 1 cut(s) | 199 |
| FaeI | CATG | 3 cut(s) | 238, 332, 454 |
| FaiI | YATR | 8 cut(s) | 236, 255, 330, 363, 420, 452, 468, 470 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 92, 124 |
| FatI | CATG | 3 cut(s) | 234, 328, 450 |
| Fnu4HI | GCNGC | 4 cut(s) | 183, 186, 536, 636 |
| FokI | GGATG | 2 cut(s) | 149, 396 |
| Fsp4HI | GCNGC | 4 cut(s) | 183, 186, 536, 636 |
| FspBI | CTAG | 3 cut(s) | 192, 377, 519 |
| GlaI | GCGC | 2 cut(s) | 287, 564 |
| GluI | GCNGC | 4 cut(s) | 183, 186, 536, 636 |
| GsuI | CTGGAG | 2 cut(s) | 407, 587 |
| HaeII | RGCGCY | 2 cut(s) | 289, 566 |
| HapII | CCGG | 2 cut(s) | 134, 663 |
| HhaI | GCGC | 2 cut(s) | 288, 565 |
| Hin1I | GRCGYC | 2 cut(s) | 498, 630 |
| Hin1II | CATG | 3 cut(s) | 238, 332, 454 |
| Hin6I | GCGC | 2 cut(s) | 286, 563 |
| HinP1I | GCGC | 2 cut(s) | 286, 563 |
| HincII | GTYRAC | 1 cut(s) | 349 |
| HindII | GTYRAC | 1 cut(s) | 349 |
| HinfI | GANTC | 4 cut(s) | 120, 238, 589, 641 |
| HpaII | CCGG | 2 cut(s) | 134, 663 |
| Hpy166II | GTNNAC | 2 cut(s) | 231, 349 |
| Hpy188I | TCNGA | 3 cut(s) | 321, 545, 588 |
| Hpy188III | TCNNGA | 3 cut(s) | 204, 386, 413 |
| Hpy8I | GTNNAC | 2 cut(s) | 231, 349 |
| Hpy99I | CGWCG | 5 cut(s) | 500, 503, 506, 632, 635 |
| HpyAV | CCTTC | 3 cut(s) | 78, 481, 537 |
| HpyCH4III | ACNGT | 1 cut(s) | 13 |
| HpyCH4IV | ACGT | 3 cut(s) | 336, 498, 630 |
| HpyCH4V | TGCA | 6 cut(s) | 128, 304, 365, 472, 512, 577 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 644 |
| HpyF3I | CTNAG | 3 cut(s) | 109, 311, 593 |
| HpySE526I | ACGT | 3 cut(s) | 336, 498, 630 |
| Hsp92I | GRCGYC | 2 cut(s) | 498, 630 |
| Hsp92II | CATG | 3 cut(s) | 238, 332, 454 |
| HspAI | GCGC | 2 cut(s) | 286, 563 |
| Kzo9I | GATC | 1 cut(s) | 115 |
| LguI | GCTCTTC | 1 cut(s) | 317 |
| LmnI | GCTCC | 4 cut(s) | 388, 543, 602, 659 |
| LpnPI | CCDG | 7 cut(s) | 77, 147, 255, 371, 426, 545, 551 |
| Lsp1109I | GCAGC | 4 cut(s) | 194, 197, 522, 647 |
| MaeI | CTAG | 3 cut(s) | 192, 377, 519 |
| MaeII | ACGT | 3 cut(s) | 336, 498, 630 |
| MaeIII | GTNAC | 2 cut(s) | 294, 665 |
| MalI | GATC | 1 cut(s) | 117 |
| MboI | GATC | 1 cut(s) | 115 |
| MboII | GAAGA | 4 cut(s) | 50, 334, 422, 565 |
| MlyI | GAGTC | 2 cut(s) | 232, 598 |
| MmeI | TCCRAC | 2 cut(s) | 568, 597 |
| MnlI | CCTC | 5 cut(s) | 34, 89, 448, 551, 553 |
| Mph1103I | ATGCAT | 1 cut(s) | 367 |
| MseI | TTAA | 1 cut(s) | 243 |
| MspI | CCGG | 2 cut(s) | 134, 663 |
| Mva1269I | GAATGC | 1 cut(s) | 512 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 644 |
| NdeII | GATC | 1 cut(s) | 115 |
| NlaIII | CATG | 3 cut(s) | 238, 332, 454 |
| NmuCI | GTSAC | 1 cut(s) | 294 |
| NsiI | ATGCAT | 1 cut(s) | 367 |
| PciSI | GCTCTTC | 1 cut(s) | 317 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 501, 636 |
| PctI | GAATGC | 1 cut(s) | 512 |
| PfeI | GAWTC | 2 cut(s) | 120, 641 |
| PflFI | GACNNNGTC | 1 cut(s) | 500 |
| PkrI | GCNGC | 4 cut(s) | 184, 187, 537, 637 |
| PleI | GAGTC | 2 cut(s) | 232, 597 |
| PpsI | GAGTC | 2 cut(s) | 232, 597 |
| Ppu21I | YACGTR | 1 cut(s) | 337 |
| PspEI | GGTNACC | 1 cut(s) | 665 |
| PsyI | GACNNNGTC | 1 cut(s) | 500 |
| RsaI | GTAC | 2 cut(s) | 104, 230 |
| RsaNI | GTAC | 2 cut(s) | 103, 229 |
| SapI | GCTCTTC | 1 cut(s) | 317 |
| SaqAI | TTAA | 1 cut(s) | 243 |
| SatI | GCNGC | 4 cut(s) | 183, 186, 536, 636 |
| Sau3AI | GATC | 1 cut(s) | 115 |
| SchI | GAGTC | 2 cut(s) | 232, 598 |
| SpeI | ACTAGT | 1 cut(s) | 191 |
| SspMI | CTAG | 3 cut(s) | 192, 377, 519 |
| TaaI | ACNGT | 1 cut(s) | 13 |
| TaiI | ACGT | 3 cut(s) | 339, 501, 633 |
| TaqI | TCGA | 3 cut(s) | 118, 203, 433 |
| TatI | WGTACW | 2 cut(s) | 102, 228 |
| TfiI | GAWTC | 2 cut(s) | 120, 641 |
| Tru1I | TTAA | 1 cut(s) | 243 |
| Tru9I | TTAA | 1 cut(s) | 243 |
| TscAI | CASTG | 1 cut(s) | 130 |
| TseFI | GTSAC | 1 cut(s) | 294 |
| TseI | GCWGC | 4 cut(s) | 182, 185, 535, 635 |
| Tsp45I | GTSAC | 1 cut(s) | 294 |
| TspDTI | ATGAA | 1 cut(s) | 439 |
| TspRI | CASTG | 1 cut(s) | 130 |
| Tth111I | GACNNNGTC | 1 cut(s) | 500 |
| XspI | CTAG | 3 cut(s) | 192, 377, 519 |
| ZraI | GACGTC | 2 cut(s) | 499, 631 |
| Zsp2I | ATGCAT | 1 cut(s) | 367 |