Rmu_sc0002200.1_g000011

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002200.1
OG0000095
Physical Location & Seq
Reverse (-)
45175 .. 46818
1644 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002200.1_g000011.1.cds

Sequence Viewer

Length: 1284 bp
atgaaactcaactttgatgctagtaactatgtagccggtagtaatgatcagggttttgttctgaatttcatgctgttgggagaaaaattaaaagatgacagcatagatagttatgtcaattgggtgaatcgtgttgtggaacgtcacagaggctcaaagattaaacagttcagggcttgcttttttcttggtttgcgctgttcgactaccattgatgagtggattcgatttgcagtggaaaagagtgttgaaatacttgaactggacttttctccagggacttcgttccctctggactccaaaaatgcagtcccctgctatcaaaaagatggattttctcaatatttgttgtgtcttgagaaactatctgctttgggacaacagtgttctgacattccaaatcggagttctcgtgtacacgatattggtttcaagtcccttaaagtccttcacttgagaaatgttggtgttacgggagaagctctggagtatttcttgtctaactctcctgttcttgaacgattatcggtgactgtgtccaaagatttggttagtttgagagtcgttggtccgtcaattgcattgaagtatttgatgatagaaaattgtcctcgcatcaaaagcgttgagattcgtgacgttaacattgttttatttagttatattggacgtggtgtgatagagttgctgctcagtaatttaccgatgcttgttgatgtatctcttgttaagttgatgtttatacctgattgtataaatcttgctttcacccagctttcatgttatgtttctcagatccaattcctgactctggatattaagggagagatgtttcgggatcttacatttcctaagttagcaaatctcaagtatctggaactaatagtttgtgcacagtatgatcggtctcttcatcagttatcttctttcttgaaggcgtctccttacttgccaagacttgtattgaagttggtttacatgagacatacagagcccggaaaaataaaagaagttattggatgccatcatcataacctcaaggatgttgaaataataggatatcgtggtattacgtgtgccattcagcatgtcaattaccttgtagaaaatgctgttgcactcgagaaaattgttatcaaccctgcgcagcttcggcgtttgcctcctagtgtggatagggaaattgaacaatctaaagtggaagaaaacgccagagatcatgcaaagcagcaccttataccaaaacggaatgtaccttcaactgtagaatttgtatgcctataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

427

Amino Acids

48.52

Weight (kDa)

8.49

Isoelectric Point (pI)

33.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1146
AclWI GGATC 2 cut(s) 790, 846
AcsI RAATTY 2 cut(s) 64, 1268
AcyI GRCGYC 1 cut(s) 938
AfaI GTAC 2 cut(s) 417, 1254
AfiI CCNNNNNNNGG 1 cut(s) 811
AflIII ACRYGT 1 cut(s) 1073
AjiI CACGTC 1 cut(s) 671
AjnI CCWGG 1 cut(s) 274
AjuI GAANNNNNNNTTGG 2 cut(s) 391, 423
AluBI AGCT 3 cut(s) 482, 775, 1150
AluI AGCT 3 cut(s) 482, 775, 1150
Alw21I GWGCWC 1 cut(s) 895
Alw26I GTCTC 3 cut(s) 912, 945, 976
Alw44I GTGCAC 1 cut(s) 891
AlwI GGATC 2 cut(s) 790, 846
Ama87I CYCGRG 1 cut(s) 1121
ApaLI GTGCAC 1 cut(s) 891
ApeKI GCWGC 3 cut(s) 688, 1147, 1228
ApoI RAATTY 2 cut(s) 64, 1268
ArsI GACNNNNNNTTYG 2 cut(s) 294, 326
AspLEI GCGC 2 cut(s) 198, 1147
AspS9I GGNCC 1 cut(s) 569
AsuC2I CCSGG 1 cut(s) 996
AsuHPI GGTGA 3 cut(s) 136, 541, 760
AvaI CYCGRG 1 cut(s) 1121
AvaII GGWCC 1 cut(s) 569
BaeGI GKGCMC 1 cut(s) 895
BanII GRGCYC 1 cut(s) 996
BarI GAAGNNNNNNTAC 2 cut(s) 959, 991
BauI CACGAG 1 cut(s) 411
Bbv12I GWGCWC 1 cut(s) 895
BbvI GCAGC 3 cut(s) 675, 1159, 1240
BccI CCATC 2 cut(s) 323, 1032
BciT130I CCWGG 1 cut(s) 276
BclI TGATCA 1 cut(s) 46
BcnI CCSGG 1 cut(s) 996
BcoDI GTCTC 3 cut(s) 912, 945, 976
BfaI CTAG 2 cut(s) 21, 1167
BfmI CTRYAG 1 cut(s) 1263
BisI GCNGC 3 cut(s) 689, 1148, 1229
BlsI GCNGC 3 cut(s) 690, 1149, 1230
Bme1390I CCNGG 2 cut(s) 276, 996
Bme18I GGWCC 1 cut(s) 569
BmeT110I CYCGRG 1 cut(s) 1121
BmgBI CACGTC 1 cut(s) 671
BmgT120I GGNCC 1 cut(s) 569
BmrFI CCNGG 2 cut(s) 276, 996
BmsI GCATC 4 cut(s) 7, 624, 696, 1010
BpmI CTGGAG 2 cut(s) 258, 506
BpuEI CTTGAG 4 cut(s) 377, 475, 851, 1022
BpuMI CCSGG 1 cut(s) 996
BsaAI YACGTR 1 cut(s) 1074
BsaHI GRCGYC 1 cut(s) 938
BsaI GGTCTC 1 cut(s) 912
BsaJI CCNNGG 1 cut(s) 275
BsaXI ACNNNNNCTCC 2 cut(s) 397, 427
Bsc4I CCNNNNNNNGG 1 cut(s) 811
Bse118I RCCGGY 1 cut(s) 35
Bse1I ACTGG 1 cut(s) 267
BseBI CCWGG 1 cut(s) 276
BseDI CCNNGG 1 cut(s) 275
BseGI GGATG 2 cut(s) 1025, 1048
BseLI CCNNNNNNNGG 1 cut(s) 811
BseMII CTCAG 2 cut(s) 706, 806
BseNI ACTGG 1 cut(s) 267
BseSI GKGCMC 1 cut(s) 895
BseXI GCAGC 3 cut(s) 675, 1159, 1240
BseYI CCCAGC 1 cut(s) 771
BsiHKAI GWGCWC 1 cut(s) 895
BsiHKCI CYCGRG 1 cut(s) 1121
BsiSI CCGG 2 cut(s) 36, 996
BslFI GGGAC 4 cut(s) 292, 296, 390, 421
BslI CCNNNNNNNGG 1 cut(s) 811
BsmAI GTCTC 3 cut(s) 912, 945, 976
BsmBI CGTCTC 1 cut(s) 945
BsmFI GGGAC 4 cut(s) 292, 296, 390, 421
Bso31I GGTCTC 1 cut(s) 912
BsoBI CYCGRG 1 cut(s) 1121
Bsp1286I GDGCHC 2 cut(s) 895, 996
Bsp1407I TGTACA 1 cut(s) 415
Bsp143I GATC 5 cut(s) 46, 795, 838, 901, 1216
BspCNI CTCAG 2 cut(s) 705, 805
BspPI GGATC 2 cut(s) 790, 846
BspTNI GGTCTC 1 cut(s) 912
BsrFI RCCGGY 1 cut(s) 35
BsrGI TGTACA 1 cut(s) 415
BsrI ACTGG 1 cut(s) 267
BssAI RCCGGY 1 cut(s) 35
BssECI CCNNGG 1 cut(s) 275
BssMI GATC 5 cut(s) 46, 795, 838, 901, 1216
BssNI GRCGYC 1 cut(s) 938
BssSI CACGAG 1 cut(s) 411
Bst2BI CACGAG 1 cut(s) 411
Bst2UI CCWGG 1 cut(s) 276
Bst4CI ACNGT 5 cut(s) 168, 384, 535, 897, 1264
Bst6I CTCTTC 1 cut(s) 915
BstACI GRCGYC 1 cut(s) 938
BstAUI TGTACA 1 cut(s) 415
BstBAI YACGTR 1 cut(s) 1074
BstC8I GCNNGC 1 cut(s) 178
BstDEI CTNAG 3 cut(s) 692, 792, 852
BstF5I GGATG 2 cut(s) 1025, 1048
BstHHI GCGC 2 cut(s) 198, 1147
BstKTI GATC 5 cut(s) 49, 798, 841, 904, 1219
BstMAI GTCTC 3 cut(s) 912, 945, 976
BstMBI GATC 5 cut(s) 46, 795, 838, 901, 1216
BstMWI GCNNNNNNNGC 2 cut(s) 621, 1153
BstNI CCWGG 1 cut(s) 276
BstNSI RCATGY 1 cut(s) 1091
BstSCI CCNGG 2 cut(s) 274, 994
BstSFI CTRYAG 1 cut(s) 1263
BstSLI GKGCMC 1 cut(s) 895
BstV1I GCAGC 3 cut(s) 675, 1159, 1240
BstX2I RGATCY 2 cut(s) 795, 838
BstXI CCANNNNNNTGG 1 cut(s) 547
BstYI RGATCY 2 cut(s) 795, 838
BtrI CACGTC 1 cut(s) 671
BtsCI GGATG 2 cut(s) 1025, 1048
BtsI GCAGTG 1 cut(s) 240
BtsIMutI CAGTG 2 cut(s) 240, 389
Cac8I GCNNGC 1 cut(s) 178
CfoI GCGC 2 cut(s) 198, 1147
Cfr10I RCCGGY 1 cut(s) 35
Cfr13I GGNCC 1 cut(s) 569
CseI GACGC 1 cut(s) 927
Csp6I GTAC 2 cut(s) 416, 1253
CviAII CATG 5 cut(s) 70, 780, 979, 1088, 1220
CviJI RGCY 7 cut(s) 35, 153, 176, 482, 775, 994, 1150
CviKI_1 RGCY 7 cut(s) 35, 153, 176, 482, 775, 994, 1150
CviQI GTAC 2 cut(s) 416, 1253
DdeI CTNAG 3 cut(s) 692, 792, 852
DpnI GATC 5 cut(s) 48, 797, 840, 903, 1218
DpnII GATC 5 cut(s) 46, 795, 838, 901, 1216
Eam1104I CTCTTC 1 cut(s) 915
EarI CTCTTC 1 cut(s) 915
Eco24I GRGCYC 1 cut(s) 996
Eco31I GGTCTC 1 cut(s) 912
Eco32I GATATC 1 cut(s) 1061
Eco47I GGWCC 1 cut(s) 569
Eco88I CYCGRG 1 cut(s) 1121
EcoRII CCWGG 1 cut(s) 274
EcoRV GATATC 1 cut(s) 1061
EcoT38I GRGCYC 1 cut(s) 996
Esp3I CGTCTC 1 cut(s) 945
FaeI CATG 5 cut(s) 73, 783, 982, 1091, 1223
FaqI GGGAC 4 cut(s) 292, 296, 390, 421
FatI CATG 5 cut(s) 69, 779, 978, 1087, 1219
FbaI TGATCA 1 cut(s) 46
Fnu4HI GCNGC 3 cut(s) 689, 1148, 1229
FokI GGATG 2 cut(s) 1032, 1055
FriOI GRGCYC 1 cut(s) 996
Fsp4HI GCNGC 3 cut(s) 689, 1148, 1229
FspBI CTAG 2 cut(s) 21, 1167
FspI TGCGCA 1 cut(s) 1146
GlaI GCGC 2 cut(s) 197, 1146
GluI GCNGC 3 cut(s) 689, 1148, 1229
GsaI CCCAGC 1 cut(s) 775
GsuI CTGGAG 2 cut(s) 258, 506
HapII CCGG 2 cut(s) 36, 996
HgaI GACGC 1 cut(s) 927
HhaI GCGC 2 cut(s) 198, 1147
Hin1I GRCGYC 1 cut(s) 938
Hin1II CATG 5 cut(s) 73, 783, 982, 1091, 1223
Hin6I GCGC 2 cut(s) 196, 1145
HinP1I GCGC 2 cut(s) 196, 1145
HincII GTYRAC 1 cut(s) 643
HindII GTYRAC 1 cut(s) 643
HinfI GANTC 6 cut(s) 127, 223, 296, 561, 631, 808
HpaI GTTAAC 1 cut(s) 643
HpaII CCGG 2 cut(s) 36, 996
HphI GGTGA 3 cut(s) 136, 541, 760
Hpy166II GTNNAC 5 cut(s) 416, 418, 643, 893, 976
Hpy188I TCNGA 4 cut(s) 63, 391, 405, 795
Hpy8I GTNNAC 5 cut(s) 416, 418, 643, 893, 976
HpyAV CCTTC 3 cut(s) 458, 928, 1266
HpyCH4III ACNGT 5 cut(s) 168, 384, 535, 897, 1264
HpyCH4IV ACGT 4 cut(s) 142, 639, 670, 1073
HpyCH4V TGCA 6 cut(s) 233, 308, 581, 893, 1118, 1223
HpyF10VI GCNNNNNNNGC 2 cut(s) 621, 1153
HpyF3I CTNAG 3 cut(s) 692, 792, 852
HpySE526I ACGT 4 cut(s) 142, 639, 670, 1073
Hsp92I GRCGYC 1 cut(s) 938
Hsp92II CATG 5 cut(s) 73, 783, 982, 1091, 1223
HspAI GCGC 2 cut(s) 196, 1145
Ksp22I TGATCA 1 cut(s) 46
KspAI GTTAAC 1 cut(s) 643
Kzo9I GATC 5 cut(s) 46, 795, 838, 901, 1216
Lsp1109I GCAGC 3 cut(s) 675, 1159, 1240
LweI GCATC 4 cut(s) 7, 624, 696, 1010
MaeI CTAG 2 cut(s) 21, 1167
MaeII ACGT 4 cut(s) 142, 639, 670, 1073
MaeIII GTNAC 5 cut(s) 23, 143, 469, 529, 635
MalI GATC 5 cut(s) 48, 797, 840, 903, 1218
MboI GATC 5 cut(s) 46, 795, 838, 901, 1216
MboII GAAGA 3 cut(s) 902, 915, 1214
MfeI CAATTG 2 cut(s) 118, 576
MflI RGATCY 2 cut(s) 795, 838
MhlI GDGCHC 2 cut(s) 895, 996
MlyI GAGTC 3 cut(s) 290, 570, 802
MnlI CCTC 5 cut(s) 143, 300, 621, 1046, 1173
MseI TTAA 6 cut(s) 89, 162, 441, 642, 729, 819
MspI CCGG 2 cut(s) 36, 996
MspR9I CCNGG 2 cut(s) 276, 996
MunI CAATTG 2 cut(s) 118, 576
MvaI CCWGG 1 cut(s) 276
MwoI GCNNNNNNNGC 2 cut(s) 621, 1153
NciI CCSGG 1 cut(s) 996
NdeII GATC 5 cut(s) 46, 795, 838, 901, 1216
NlaIII CATG 5 cut(s) 73, 783, 982, 1091, 1223
NmuCI GTSAC 3 cut(s) 143, 529, 635
NsbI TGCGCA 1 cut(s) 1146
NspI RCATGY 1 cut(s) 1091
PaeR7I CTCGAG 1 cut(s) 1121
PcsI WCGNNNNNNNCGW 1 cut(s) 409
PfeI GAWTC 3 cut(s) 127, 223, 631
PflFI GACNNNGTC 1 cut(s) 535
PkrI GCNGC 3 cut(s) 690, 1149, 1230
PleI GAGTC 3 cut(s) 290, 569, 802
PpsI GAGTC 3 cut(s) 290, 569, 802
Ppu21I YACGTR 1 cut(s) 1074
Psp6I CCWGG 1 cut(s) 274
PspFI CCCAGC 1 cut(s) 771
PspGI CCWGG 1 cut(s) 274
PspPI GGNCC 1 cut(s) 569
PsuI RGATCY 2 cut(s) 795, 838
PsyI GACNNNGTC 1 cut(s) 535
RsaI GTAC 2 cut(s) 417, 1254
RsaNI GTAC 2 cut(s) 416, 1253
SaqAI TTAA 6 cut(s) 89, 162, 441, 642, 729, 819
SatI GCNGC 3 cut(s) 689, 1148, 1229
Sau3AI GATC 5 cut(s) 46, 795, 838, 901, 1216
Sau96I GGNCC 1 cut(s) 569
SchI GAGTC 3 cut(s) 290, 570, 802
ScrFI CCNGG 2 cut(s) 276, 996
SduI GDGCHC 2 cut(s) 895, 996
SfaNI GCATC 4 cut(s) 7, 624, 696, 1010
SfcI CTRYAG 1 cut(s) 1263
Sfr274I CTCGAG 1 cut(s) 1121
SinI GGWCC 1 cut(s) 569
SlaI CTCGAG 1 cut(s) 1121
SmlI CTYRAG 5 cut(s) 356, 454, 866, 1037, 1121
SmoI CTYRAG 5 cut(s) 356, 454, 866, 1037, 1121
SspI AATATT 1 cut(s) 344
SspMI CTAG 2 cut(s) 21, 1167
StyD4I CCNGG 2 cut(s) 274, 994
TaaI ACNGT 5 cut(s) 168, 384, 535, 897, 1264
TaiI ACGT 4 cut(s) 145, 642, 673, 1076
TaqI TCGA 3 cut(s) 203, 226, 1122
TaqII GACCGA 1 cut(s) 894
TatI WGTACW 1 cut(s) 415
TfiI GAWTC 3 cut(s) 127, 223, 631
Tru1I TTAA 6 cut(s) 89, 162, 441, 642, 729, 819
Tru9I TTAA 6 cut(s) 89, 162, 441, 642, 729, 819
TscAI CASTG 2 cut(s) 240, 389
TseFI GTSAC 3 cut(s) 143, 529, 635
TseI GCWGC 3 cut(s) 688, 1147, 1228
Tsp45I GTSAC 3 cut(s) 143, 529, 635
TspDTI ATGAA 4 cut(s) 17, 58, 768, 902
TspGWI ACGGA 2 cut(s) 561, 1261
TspRI CASTG 2 cut(s) 240, 389
Tth111I GACNNNGTC 1 cut(s) 535
VneI GTGCAC 1 cut(s) 891
VpaK11BI GGWCC 1 cut(s) 569
XapI RAATTY 2 cut(s) 64, 1268
XceI RCATGY 1 cut(s) 1091
XhoI CTCGAG 1 cut(s) 1121
XspI CTAG 2 cut(s) 21, 1167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.