FvH4_6g05140

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000095
Physical Location & Seq
Forward (+)
2875040 .. 2877628
2589 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g05140.t1

Sequence Viewer

Length: 1581 bp
ATGACAACTCGTGGTAACATGCCTGAAGTGACAAAAGCAACTGGGATACAAACTGAGTGGTATCTTGATAAAATCTTGACTGACACTGAAAATGGTGACGGCTTCTTTGACTTCCTCAAATCCCCTGTTGCCGACACAGGTTTATATTTCAAGGACGATGTGCAAAACTTGGTGGTGGTGGACAGGATTAGTGCATTGCCAGATGATCTTATAGTTAGTATAGTGTCTCTTCTGCCTCTAAAGGAAGCAACAGCTACTAGTGTGCTATCTACTCGATGGCGCCACATCTGGACCTTCGTGACCACTCTCGATTTTCACCATGACATTCTTTTCCAACTGCGTTCATACAAACGAGTAAGAATAGAGTCGGAACTTGATAGGTACTTGAATTGGGTGAATAGTGTAATGAAACAACATAGAGGCCCAACTACGCTTAGGGTTTATGCCGATTTAAATGATCCCAAGTATGAAAGTTCCATTCATACATGGGGTCGATTCGTATCGGAAAAGAGAGTCCAAAACTTTGACTTGCTCGTTTCGAAGAACAGAGGTTTCCCCAAAGCTGGAGGAAACAAGATTAAGGCTCTCTTTAGTGCTTTTCCCGATTCAGACCAACTTGTAGATGTGGACAGATCAGAGTCGACTGACTTGTGCCCTAAACCTGATATTCTGCACCCTCTTTTATACACTTGTTTTAGTGCATTCAGTTGCTTGAAGCACCTCAGAGCTCTAGAATTCAAGTCTGTTAAAGGACTTACTGGACAAGTTCTGGAGTGCTTCTTGTCTCATTGCCCACTTCTTGAGCGATTAACAGTGCTTCGCGCTTTCAAGTTGGATAGTTTTAAAGTTATAGGCCCGGCAATTGCCTTGAAATACTTACACATCCAGAAACATACCGGTCTATTGAGCATGGAGATTTGTGATGTAAAGCTTGTTTCATTTTTTTATGGAGGAGATGCGATAAAATTGCTGCTTAGGAATGTGCCGCAGCTTGTTGAGGTCTCCATTTCTTCCCGCCAAGTTTCATTTGGACAGTGTGACTTTCATCATCAGCTAGAGGTTTTCAGACTGAGGGGATTTGTGCTAAACAATGAGAAACATGTATTACCTACATATGTGAATCTCAAGCATTTGGAACTGGGATTGAAGGAACGTGACAATTGCTGTCTTCTTCAATTAAGGGCTTTCATGAAGGCATGTCCTTATTTGCACAAACTTGTACTGAAGTTTGCAAGGACTATCTCTCTGGGTTATAGGAGAAAAATGGAGATTAAGCAAGCTCCCAAATACTCCCATAAATTCCTCAGGGAAGTGGAAGTGGTAGAGTATCACGATCGTACCGGTGATTTCCAACTTGTCAAGTACTTGTTAGAGAATGCTGTTGAACTAAAAAAACTTGTTATCCATCCTGTTGGAGAGTGGTATTCTCGTTTGCGGATGTTGAGGAAGTATGGTACCCGAGATACAGAGGAGGAAAGAGAACAAGCTACAGAGCGGCTTAAAGAACTAGTGCCTTCTACTTTAGAATTCATATGCAGGCTGGAGCAACCAGCTTTCTATATCAGTGACTGTGACCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

527

Amino Acids

60.95

Weight (kDa)

8.73

Isoelectric Point (pI)

35.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 63 - 98 2.3e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 233 - 473 2.6e-21 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1454
AccB1I GGYRCC 2 cut(s) 279, 1454
AccBSI CCGCTC 1 cut(s) 1495
AccI GTMKAC 1 cut(s) 641
AccII CGCG 1 cut(s) 822
AciI CCGC 4 cut(s) 986, 1015, 1435, 1495
AclWI GGATC 1 cut(s) 452
AcsI RAATTY 3 cut(s) 734, 1298, 1526
AcuI CTGAAG 2 cut(s) 45, 1244
AcyI GRCGYC 1 cut(s) 280
AfaI GTAC 5 cut(s) 383, 1221, 1339, 1364, 1456
AfiI CCNNNNNNNGG 1 cut(s) 563
AflIII ACRYGT 1 cut(s) 1099
AgeI ACCGGT 2 cut(s) 896, 1340
AgsI TTSAA 9 cut(s) 151, 388, 715, 739, 829, 871, 1147, 1175, 1385
AhlI ACTAGT 2 cut(s) 257, 1507
AluBI AGCT 9 cut(s) 254, 563, 728, 931, 991, 1054, 1280, 1487, 1553
AluI AGCT 9 cut(s) 254, 563, 728, 931, 991, 1054, 1280, 1487, 1553
Alw21I GWGCWC 1 cut(s) 730
Alw26I GTCTC 3 cut(s) 231, 789, 1006
AlwI GGATC 1 cut(s) 452
AlwNI CAGNNNCTG 1 cut(s) 1569
Ama87I CYCGRG 1 cut(s) 1458
AoxI GGCC 2 cut(s) 421, 853
ApeKI GCWGC 2 cut(s) 970, 988
ApoI RAATTY 3 cut(s) 734, 1298, 1526
ArsI GACNNNNNNTTYG 2 cut(s) 89, 121
AsiGI ACCGGT 2 cut(s) 896, 1340
Asp718I GGTACC 1 cut(s) 1454
AspLEI GCGC 2 cut(s) 282, 824
AspS9I GGNCC 3 cut(s) 291, 422, 854
AsuC2I CCSGG 1 cut(s) 857
AsuHPI GGTGA 4 cut(s) 107, 308, 406, 1355
AsuII TTCGAA 1 cut(s) 539
AvaI CYCGRG 1 cut(s) 1458
AvaII GGWCC 1 cut(s) 291
AxyI CCTNAGG 1 cut(s) 1304
BaeGI GKGCMC 1 cut(s) 656
BaeI ACNNNNGTAYC 2 cut(s) 1321, 1354
BanI GGYRCC 2 cut(s) 279, 1454
BanII GRGCYC 1 cut(s) 730
BauI CACGAG 1 cut(s) 9
BbsI GAAGAC 1 cut(s) 1160
Bbv12I GWGCWC 1 cut(s) 730
BbvI GCAGC 2 cut(s) 957, 1000
BccI CCATC 2 cut(s) 270, 1413
BceAI ACGGC 1 cut(s) 115
BcgI CGANNNNNNTGC 2 cut(s) 949, 983
BciVI GTATCC 1 cut(s) 39
BcnI CCSGG 1 cut(s) 857
BcoDI GTCTC 3 cut(s) 231, 789, 1006
BcuI ACTAGT 2 cut(s) 257, 1507
BfaI CTAG 4 cut(s) 258, 731, 1055, 1508
BfmI CTRYAG 1 cut(s) 1488
BfoI RGCGCY 1 cut(s) 283
BfuI GTATCC 1 cut(s) 39
BisI GCNGC 4 cut(s) 971, 986, 989, 1496
BlsI GCNGC 4 cut(s) 972, 987, 990, 1497
BmcAI AGTACT 1 cut(s) 1364
Bme1390I CCNGG 1 cut(s) 857
Bme18I GGWCC 1 cut(s) 291
BmeT110I CYCGRG 1 cut(s) 1458
BmgT120I GGNCC 3 cut(s) 291, 422, 854
BmiI GGNNCC 2 cut(s) 281, 1456
BmrFI CCNGG 1 cut(s) 857
BmrI ACTGGG 2 cut(s) 51, 1148
BmsI GCATC 1 cut(s) 946
BmuI ACTGGG 2 cut(s) 51, 1148
BpiI GAAGAC 1 cut(s) 1160
BpmI CTGGAG 3 cut(s) 585, 791, 1562
Bpu10I CCTNAGC 2 cut(s) 434, 974
Bpu14I TTCGAA 1 cut(s) 539
BpuEI CTTGAG 2 cut(s) 821, 1109
BpuMI CCSGG 1 cut(s) 857
BsaBI GATNNNNATC 1 cut(s) 499
BsaHI GRCGYC 1 cut(s) 280
BsaI GGTCTC 1 cut(s) 1006
BsaWI WCCGGW 2 cut(s) 896, 1340
Bsc4I CCNNNNNNNGG 1 cut(s) 563
Bse118I RCCGGY 2 cut(s) 896, 1340
Bse1I ACTGG 4 cut(s) 46, 763, 1143, 1576
Bse21I CCTNAGG 1 cut(s) 1304
Bse3DI GCAATG 2 cut(s) 194, 787
Bse8I GATNNNNATC 1 cut(s) 499
BseGI GGATG 3 cut(s) 882, 1405, 1443
BseJI GATNNNNATC 1 cut(s) 499
BseLI CCNNNNNNNGG 1 cut(s) 563
BseMI GCAATG 2 cut(s) 194, 787
BseMII CTCAG 4 cut(s) 45, 736, 1061, 1318
BseNI ACTGG 4 cut(s) 46, 763, 1143, 1576
BseRI GAGGAG 2 cut(s) 966, 1484
BseSI GKGCMC 1 cut(s) 656
BseXI GCAGC 2 cut(s) 957, 1000
BsgI GTGCAG 1 cut(s) 656
Bsh1236I CGCG 1 cut(s) 822
Bsh1285I CGRYCG 1 cut(s) 1336
BshFI GGCC 2 cut(s) 423, 855
BshNI GGYRCC 2 cut(s) 279, 1454
BshTI ACCGGT 2 cut(s) 896, 1340
BsiEI CGRYCG 1 cut(s) 1336
BsiHKAI GWGCWC 1 cut(s) 730
BsiHKCI CYCGRG 1 cut(s) 1458
BsiSI CCGG 3 cut(s) 857, 897, 1341
BslI CCNNNNNNNGG 1 cut(s) 563
BsmAI GTCTC 3 cut(s) 231, 789, 1006
BsmI GAATGC 2 cut(s) 701, 1381
BsnI GGCC 2 cut(s) 423, 855
Bso31I GGTCTC 1 cut(s) 1006
BsoBI CYCGRG 1 cut(s) 1458
Bsp119I TTCGAA 1 cut(s) 539
Bsp1286I GDGCHC 2 cut(s) 656, 730
Bsp143I GATC 4 cut(s) 205, 457, 632, 1333
BspACI CCGC 4 cut(s) 986, 1015, 1435, 1495
BspANI GGCC 2 cut(s) 423, 855
BspCNI CTCAG 4 cut(s) 46, 735, 1062, 1317
BspFNI CGCG 1 cut(s) 822
BspHI TCATGA 1 cut(s) 1188
BspLI GGNNCC 2 cut(s) 281, 1456
BspPI GGATC 1 cut(s) 452
BspT104I TTCGAA 1 cut(s) 539
BspT107I GGYRCC 2 cut(s) 279, 1454
BspTNI GGTCTC 1 cut(s) 1006
BsrBI CCGCTC 1 cut(s) 1495
BsrDI GCAATG 2 cut(s) 194, 787
BsrFI RCCGGY 2 cut(s) 896, 1340
BsrI ACTGG 4 cut(s) 46, 763, 1143, 1576
BssAI RCCGGY 2 cut(s) 896, 1340
BssMI GATC 4 cut(s) 205, 457, 632, 1333
BssNI GRCGYC 1 cut(s) 280
BssSI CACGAG 1 cut(s) 9
Bst2BI CACGAG 1 cut(s) 9
Bst4CI ACNGT 3 cut(s) 814, 1035, 1571
Bst6I CTCTTC 1 cut(s) 234
BstACI GRCGYC 1 cut(s) 280
BstBI TTCGAA 1 cut(s) 539
BstC8I GCNNGC 2 cut(s) 1278, 1538
BstDEI CTNAG 6 cut(s) 54, 434, 722, 974, 1070, 1304
BstF5I GGATG 3 cut(s) 882, 1405, 1443
BstFNI CGCG 1 cut(s) 822
BstH2I RGCGCY 1 cut(s) 283
BstHHI GCGC 2 cut(s) 282, 824
BstKTI GATC 4 cut(s) 208, 460, 635, 1336
BstMAI GTCTC 3 cut(s) 231, 789, 1006
BstMBI GATC 4 cut(s) 205, 457, 632, 1333
BstMCI CGRYCG 1 cut(s) 1336
BstNSI RCATGY 3 cut(s) 22, 1103, 1200
BstSCI CCNGG 1 cut(s) 855
BstSFI CTRYAG 1 cut(s) 1488
BstSLI GKGCMC 1 cut(s) 656
BstUI CGCG 1 cut(s) 822
BstV1I GCAGC 2 cut(s) 957, 1000
BstV2I GAAGAC 1 cut(s) 1160
BstXI CCANNNNNNTGG 1 cut(s) 1412
Bsu36I CCTNAGG 1 cut(s) 1304
BsuI GTATCC 1 cut(s) 39
BsuRI GGCC 2 cut(s) 423, 855
BtsCI GGATG 3 cut(s) 882, 1405, 1443
BtsIMutI CAGTG 4 cut(s) 84, 819, 1040, 1570
Cac8I GCNNGC 2 cut(s) 1278, 1538
CaiI CAGNNNCTG 1 cut(s) 1569
CciI TCATGA 1 cut(s) 1188
CfoI GCGC 2 cut(s) 282, 824
Cfr10I RCCGGY 2 cut(s) 896, 1340
Cfr13I GGNCC 3 cut(s) 291, 422, 854
Csp6I GTAC 5 cut(s) 382, 1220, 1338, 1363, 1455
CspAI ACCGGT 2 cut(s) 896, 1340
CspCI CAANNNNNGTGG 2 cut(s) 38, 73
CviAII CATG 7 cut(s) 19, 320, 486, 910, 1100, 1189, 1197
CviQI GTAC 5 cut(s) 382, 1220, 1338, 1363, 1455
DdeI CTNAG 6 cut(s) 54, 434, 722, 974, 1070, 1304
DinI GGCGCC 1 cut(s) 281
DpnI GATC 4 cut(s) 207, 459, 634, 1335
DpnII GATC 4 cut(s) 205, 457, 632, 1333
DraI TTTAAA 2 cut(s) 453, 844
Eam1104I CTCTTC 1 cut(s) 234
EarI CTCTTC 1 cut(s) 234
Ecl136II GAGCTC 1 cut(s) 728
Eco24I GRGCYC 1 cut(s) 730
Eco31I GGTCTC 1 cut(s) 1006
Eco47I GGWCC 1 cut(s) 291
Eco53kI GAGCTC 1 cut(s) 728
Eco57I CTGAAG 2 cut(s) 45, 1244
Eco81I CCTNAGG 1 cut(s) 1304
Eco88I CYCGRG 1 cut(s) 1458
EcoICRI GAGCTC 1 cut(s) 728
EcoRI GAATTC 2 cut(s) 734, 1526
EcoT38I GRGCYC 1 cut(s) 730
EgeI GGCGCC 1 cut(s) 281
EheI GGCGCC 1 cut(s) 281
FaeI CATG 7 cut(s) 22, 323, 489, 913, 1103, 1192, 1200
FalI AAGNNNNNCTT 2 cut(s) 572, 604
FatI CATG 7 cut(s) 18, 319, 485, 909, 1099, 1188, 1196
FauI CCCGC 1 cut(s) 1022
FauNDI CATATG 2 cut(s) 1114, 1532
FblI GTMKAC 1 cut(s) 641
Fnu4HI GCNGC 4 cut(s) 971, 986, 989, 1496
FokI GGATG 3 cut(s) 869, 1392, 1450
FriOI GRGCYC 1 cut(s) 730
Fsp4HI GCNGC 4 cut(s) 971, 986, 989, 1496
FspBI CTAG 4 cut(s) 258, 731, 1055, 1508
GlaI GCGC 2 cut(s) 281, 823
GluI GCNGC 4 cut(s) 971, 986, 989, 1496
GsuI CTGGAG 3 cut(s) 585, 791, 1562
HaeII RGCGCY 1 cut(s) 283
HaeIII GGCC 2 cut(s) 423, 855
HapII CCGG 3 cut(s) 857, 897, 1341
HhaI GCGC 2 cut(s) 282, 824
Hin1I GRCGYC 1 cut(s) 280
Hin1II CATG 7 cut(s) 22, 323, 489, 913, 1103, 1192, 1200
Hin6I GCGC 2 cut(s) 280, 822
HinP1I GCGC 2 cut(s) 280, 822
HincII GTYRAC 1 cut(s) 642
HindII GTYRAC 1 cut(s) 642
HindIII AAGCTT 1 cut(s) 929
HinfI GANTC 6 cut(s) 365, 495, 513, 605, 638, 1120
HpaII CCGG 3 cut(s) 857, 897, 1341
HphI GGTGA 4 cut(s) 107, 308, 406, 1355
Hpy166II GTNNAC 3 cut(s) 181, 628, 642
Hpy188I TCNGA 6 cut(s) 370, 505, 610, 637, 725, 1067
Hpy8I GTNNAC 3 cut(s) 181, 628, 642
HpyAV CCTTC 4 cut(s) 304, 1141, 1186, 1524
HpyCH4III ACNGT 3 cut(s) 814, 1035, 1571
HpyCH4IV ACGT 1 cut(s) 1153
HpyCH4V TGCA 7 cut(s) 163, 194, 673, 701, 1210, 1232, 1536
HpyF3I CTNAG 6 cut(s) 54, 434, 722, 974, 1070, 1304
HpySE526I ACGT 1 cut(s) 1153
Hsp92I GRCGYC 1 cut(s) 280
Hsp92II CATG 7 cut(s) 22, 323, 489, 913, 1103, 1192, 1200
HspAI GCGC 2 cut(s) 280, 822
KasI GGCGCC 1 cut(s) 279
KpnI GGTACC 1 cut(s) 1458
Kzo9I GATC 4 cut(s) 205, 457, 632, 1333
LmnI GCTCC 2 cut(s) 1285, 1543
Lsp1109I GCAGC 2 cut(s) 957, 1000
LweI GCATC 1 cut(s) 946
MaeI CTAG 4 cut(s) 258, 731, 1055, 1508
MaeII ACGT 1 cut(s) 1153
MaeIII GTNAC 8 cut(s) 14, 28, 95, 298, 1037, 1154, 1565, 1571
MalI GATC 4 cut(s) 207, 459, 634, 1335
MbiI CCGCTC 1 cut(s) 1495
MboI GATC 4 cut(s) 205, 457, 632, 1333
MboII GAAGA 5 cut(s) 221, 553, 1002, 1160, 1163
MfeI CAATTG 2 cut(s) 861, 1159
MhlI GDGCHC 2 cut(s) 656, 730
MluCI AATT 8 cut(s) 388, 734, 861, 965, 1159, 1175, 1298, 1526
Mly113I GGCGCC 1 cut(s) 280
MlyI GAGTC 3 cut(s) 374, 522, 647
MmeI TCCRAC 5 cut(s) 348, 358, 813, 1375, 1393
MseI TTAA 8 cut(s) 452, 579, 747, 809, 843, 1178, 1272, 1500
MspI CCGG 3 cut(s) 857, 897, 1341
MspR9I CCNGG 1 cut(s) 857
MunI CAATTG 2 cut(s) 861, 1159
Mva1269I GAATGC 2 cut(s) 701, 1381
MvnI CGCG 1 cut(s) 822
NarI GGCGCC 1 cut(s) 280
NciI CCSGG 1 cut(s) 857
NdeI CATATG 2 cut(s) 1114, 1532
NdeII GATC 4 cut(s) 205, 457, 632, 1333
NlaIII CATG 7 cut(s) 22, 323, 489, 913, 1103, 1192, 1200
NlaIV GGNNCC 2 cut(s) 281, 1456
NmuCI GTSAC 7 cut(s) 28, 95, 298, 1037, 1154, 1565, 1571
NspI RCATGY 3 cut(s) 22, 1103, 1200
NspV TTCGAA 1 cut(s) 539
PagI TCATGA 1 cut(s) 1188
PciI ACATGT 1 cut(s) 1099
PctI GAATGC 2 cut(s) 701, 1381
PfeI GAWTC 3 cut(s) 495, 605, 1120
PinAI ACCGGT 2 cut(s) 896, 1340
PkrI GCNGC 4 cut(s) 972, 987, 990, 1497
Ple19I CGATCG 1 cut(s) 1336
PleI GAGTC 3 cut(s) 373, 521, 646
PluTI GGCGCC 1 cut(s) 283
PpsI GAGTC 3 cut(s) 373, 521, 646
PscI ACATGT 1 cut(s) 1099
Psp124BI GAGCTC 1 cut(s) 730
PspN4I GGNNCC 2 cut(s) 281, 1456
PspPI GGNCC 3 cut(s) 291, 422, 854
PstNI CAGNNNCTG 1 cut(s) 1569
PvuI CGATCG 1 cut(s) 1336
RsaI GTAC 5 cut(s) 383, 1221, 1339, 1364, 1456
RsaNI GTAC 5 cut(s) 382, 1220, 1338, 1363, 1455
SacI GAGCTC 1 cut(s) 730
SalI GTCGAC 1 cut(s) 640
SaqAI TTAA 8 cut(s) 452, 579, 747, 809, 843, 1178, 1272, 1500
SatI GCNGC 4 cut(s) 971, 986, 989, 1496
Sau3AI GATC 4 cut(s) 205, 457, 632, 1333
Sau96I GGNCC 3 cut(s) 291, 422, 854
ScaI AGTACT 1 cut(s) 1364
SchI GAGTC 3 cut(s) 374, 522, 647
ScrFI CCNGG 1 cut(s) 857
SduI GDGCHC 2 cut(s) 656, 730
SfaNI GCATC 1 cut(s) 946
SfcI CTRYAG 1 cut(s) 1488
SfoI GGCGCC 1 cut(s) 281
SfuI TTCGAA 1 cut(s) 539
SinI GGWCC 1 cut(s) 291
SmiI ATTTAAAT 1 cut(s) 453
SmlI CTYRAG 2 cut(s) 800, 1124
SmoI CTYRAG 2 cut(s) 800, 1124
SpeI ACTAGT 2 cut(s) 257, 1507
Sse9I AATT 8 cut(s) 388, 734, 861, 965, 1159, 1175, 1298, 1526
SsiI CCGC 4 cut(s) 986, 1015, 1435, 1495
SspDI GGCGCC 1 cut(s) 279
SspMI CTAG 4 cut(s) 258, 731, 1055, 1508
SstI GAGCTC 1 cut(s) 730
StyD4I CCNGG 1 cut(s) 855
SwaI ATTTAAAT 1 cut(s) 453
TaaI ACNGT 3 cut(s) 814, 1035, 1571
TaiI ACGT 1 cut(s) 1156
TaqI TCGA 5 cut(s) 274, 309, 493, 539, 641
TasI AATT 8 cut(s) 388, 734, 861, 965, 1159, 1175, 1298, 1526
TatI WGTACW 2 cut(s) 1219, 1362
TauI GCSGC 2 cut(s) 988, 1498
TfiI GAWTC 3 cut(s) 495, 605, 1120
Tru1I TTAA 8 cut(s) 452, 579, 747, 809, 843, 1178, 1272, 1500
Tru9I TTAA 8 cut(s) 452, 579, 747, 809, 843, 1178, 1272, 1500
TscAI CASTG 4 cut(s) 91, 819, 1040, 1570
TseFI GTSAC 7 cut(s) 28, 95, 298, 1037, 1154, 1565, 1571
TseI GCWGC 2 cut(s) 970, 988
Tsp45I GTSAC 7 cut(s) 28, 95, 298, 1037, 1154, 1565, 1571
TspRI CASTG 4 cut(s) 91, 819, 1040, 1570
VpaK11BI GGWCC 1 cut(s) 291
XapI RAATTY 3 cut(s) 734, 1298, 1526
XbaI TCTAGA 1 cut(s) 730
XceI RCATGY 3 cut(s) 22, 1103, 1200
XcmI CCANNNNNNNNNTGG 1 cut(s) 1025
XmiI GTMKAC 1 cut(s) 641
XspI CTAG 4 cut(s) 258, 731, 1055, 1508
ZrmI AGTACT 1 cut(s) 1364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.