MD02G1269100.v1.1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000095
Physical Location & Seq
Reverse (-)
32361605 .. 32365537
3933 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1269100.v1.1.491

Sequence Viewer

Length: 1551 bp
ATGAAGAAAAGAGTTCGGCCCAACTTTCAATTTGTCCAGTTCAAGGCGTATCTGTTCAACTTGGAAGCCCGACGTCAGACAGAAACGGGGAAAAAGAACTTGGGAAAGAATGGGAGAAATAGGGGTACTGATTACAACTTGGTGGACCGAATCAGTTGGTTGCCAGATGAAGTTCTTGTTAGTATATTGTCTCGCTTGCCACTAAAGGAAGCAGCAGCTACTAGTATCCTTTCTAGGCAATGGCGGTATGTGTGGGTGTCAACTATGACTCTCGTCTTTGATTCTGAATTTGATATTTACCCCTTTCACCGCTTCTATGAAATTAAACCAGAACTAAGAGACCAGGAAACACGTAGATACGTTGATTGGGTAAATCATGTGGTGGAACATCATACAGGAACAACAATTGAACGATTTAGGGCTTGCTTCCATTTGGATTATCGTTACTCAAGCTCCATAGATAAATGGATTCATATTGCAAGGAAAAAGCAAGTTCAAATACTTGAGCTGGATTTCCATGTGCGTGCTAGGGAAAATTACTATACATTTTCGGAGGAACTTTTAGGTATCAATCAAGTTTCTGCTTCAAAGCTCAAGCACTCATATCCTGAAATTCCAAGTGTACGCTTTTGTGGATACAATACTGGATTTAAATTCCTCAAAGCTCTTTGTGTCTGCAAGGTTTCTGTGAGTCAAGAAATTCTCGAGTACTTCTTGTCTAATTGCCCCCTTCTTGAGCGATTAACAGTGCGCTACACTACAAAAAATTTGGTCAATTTAAGAGTTGTTGGCCCCTCAATTGCCTTGAAGTATCTGGTGATAGAATCTTGTCCAGGCCTCCACAGCATTGAGATTTCTGGTGTAAACCTTGTTTCATTTTCCTATTGTGGAACTGCTATAAACCTGCTTCTCAGCAAAGTACCTTTTCTTCTTGAGGTATCCATTTCTGAAGAGCCCGTTAAAAATTCCAGCGATCATCGACATAGGGTATGGGGTATACATTATTTGGTATCCCATAGATCCATAGTGCTTCCTTTCACCCAACTTTCTTGCTGTCTTGCTCAACTAGAGATTCTCGAGGTGGATATTGTTGGAGCGGTCTACAATGACAGCAACACATTTCCTATATTAGCAAATCTCAAGCATTTGAAGTTATTGATTGGAGCAAATTATTATCGGGATCTTGATCACTTATCTTCCTTCATGAAGGCATGTCCTTACTTGAAGAGACTTGTGCTGAAGGTGAACAGGCCAACATGTGGGGAGAGGAAAGAAATAGCGAAAGTTGCTAAATGCCCCCATAATTACCTCAAGGTAGTTGAGATAGTGGGGTACCGTGCTCATGCATGTGTCATTCAACATGTCATGTTCCTAATGGAGAGTATTGTTGAATTGGAAAAAATTGTTATTGATCCTGTCCGGCATTGGTGTTGGCCTAGGGGAACGGATGGGGGAAGGGAAGAACCCGATCTGGAAGCGAAAGCAAGAGAACATGCTATGCAACACCTTAAACAAAGAGTGCCATCGACGGTTGAATTTGTATGCCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

517

Amino Acids

59.92

Weight (kDa)

9.07

Isoelectric Point (pI)

37.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 51 - 87 9.5e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 128 - 513 1.2e-29 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 153 - 269 4.2e-10 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 76
Acc36I ACCTGC 1 cut(s) 912
Acc65I GGTACC 1 cut(s) 1332
AccB1I GGYRCC 1 cut(s) 1332
AccB7I CCANNNNNTGG 1 cut(s) 1259
AccBSI CCGCTC 1 cut(s) 1097
AccI GTMKAC 2 cut(s) 997, 1101
AciI CCGC 3 cut(s) 244, 310, 1097
AclWI GGATC 3 cut(s) 1014, 1188, 1406
AcsI RAATTY 7 cut(s) 287, 612, 653, 699, 766, 964, 1535
AcuI CTGAAG 2 cut(s) 969, 1259
AcyI GRCGYC 1 cut(s) 73
AfaI GTAC 5 cut(s) 127, 624, 710, 921, 1334
AfiI CCNNNNNNNGG 2 cut(s) 43, 1259
AflIII ACRYGT 3 cut(s) 350, 1256, 1360
AhlI ACTAGT 1 cut(s) 221
AjnI CCWGG 2 cut(s) 342, 832
AjuI GAANNNNNNNTTGG 2 cut(s) 83, 115
AluBI AGCT 5 cut(s) 218, 453, 508, 592, 665
AluI AGCT 5 cut(s) 218, 453, 508, 592, 665
Alw21I GWGCWC 1 cut(s) 1342
Alw26I GTCTC 3 cut(s) 195, 333, 1222
AlwI GGATC 3 cut(s) 1014, 1188, 1406
Ama87I CYCGRG 2 cut(s) 704, 1076
AoxI GGCC 5 cut(s) 17, 790, 835, 1250, 1433
ApeKI GCWGC 2 cut(s) 212, 215
ApoI RAATTY 7 cut(s) 287, 612, 653, 699, 766, 964, 1535
Asp718I GGTACC 1 cut(s) 1332
AspA2I CCTAGG 1 cut(s) 1436
AspLEI GCGC 1 cut(s) 753
AspS9I GGNCC 3 cut(s) 18, 145, 791
AsuHPI GGTGA 4 cut(s) 299, 829, 1030, 1255
AvaI CYCGRG 2 cut(s) 704, 1076
AvaII GGWCC 1 cut(s) 145
AvrII CCTAGG 1 cut(s) 1436
BanI GGYRCC 1 cut(s) 1332
BanII GRGCYC 1 cut(s) 957
BarI GAAGNNNNNNTAC 2 cut(s) 912, 944
Bbv12I GWGCWC 1 cut(s) 1342
BbvI GCAGC 2 cut(s) 224, 227
BccI CCATC 2 cut(s) 1442, 1531
BciT130I CCWGG 2 cut(s) 344, 834
BciVI GTATCC 4 cut(s) 236, 629, 949, 1021
BclI TGATCA 1 cut(s) 1186
BcoDI GTCTC 3 cut(s) 195, 333, 1222
BcuI ACTAGT 1 cut(s) 221
BfaI CTAG 5 cut(s) 222, 234, 528, 1067, 1437
BfmI CTRYAG 1 cut(s) 1547
BfuAI ACCTGC 1 cut(s) 912
BfuI GTATCC 4 cut(s) 236, 629, 949, 1021
BisI GCNGC 2 cut(s) 213, 216
BlnI CCTAGG 1 cut(s) 1436
BlsI GCNGC 2 cut(s) 214, 217
BmcAI AGTACT 1 cut(s) 710
Bme1390I CCNGG 2 cut(s) 344, 834
Bme18I GGWCC 1 cut(s) 145
BmeT110I CYCGRG 2 cut(s) 704, 1076
BmgT120I GGNCC 3 cut(s) 18, 145, 791
BmiI GGNNCC 2 cut(s) 793, 1334
BmrFI CCNGG 2 cut(s) 344, 834
BoxI GACNNNNGTC 1 cut(s) 272
BpuEI CTTGAG 7 cut(s) 433, 524, 578, 755, 953, 1124, 1295
BsaAI YACGTR 1 cut(s) 353
BsaBI GATNNNNATC 1 cut(s) 1185
BsaHI GRCGYC 1 cut(s) 73
BsaI GGTCTC 1 cut(s) 333
BsaJI CCNNGG 1 cut(s) 1436
BsaXI ACNNNNNCTCC 2 cut(s) 437, 467
Bsc4I CCNNNNNNNGG 2 cut(s) 43, 1259
Bse1I ACTGG 2 cut(s) 37, 649
Bse3DI GCAATG 1 cut(s) 245
Bse8I GATNNNNATC 1 cut(s) 1185
BseBI CCWGG 2 cut(s) 344, 834
BseDI CCNNGG 1 cut(s) 1436
BseGI GGATG 1 cut(s) 1453
BseJI GATNNNNATC 1 cut(s) 1185
BseLI CCNNNNNNNGG 2 cut(s) 43, 1259
BseMI GCAATG 1 cut(s) 245
BseMII CTCAG 1 cut(s) 925
BseNI ACTGG 2 cut(s) 37, 649
BseXI GCAGC 2 cut(s) 224, 227
BshFI GGCC 5 cut(s) 19, 792, 837, 1252, 1435
BshNI GGYRCC 1 cut(s) 1332
BsiHKAI GWGCWC 1 cut(s) 1342
BsiHKCI CYCGRG 2 cut(s) 704, 1076
BsiSI CCGG 1 cut(s) 1420
BslI CCNNNNNNNGG 2 cut(s) 43, 1259
BsmAI GTCTC 3 cut(s) 195, 333, 1222
BsnI GGCC 5 cut(s) 19, 792, 837, 1252, 1435
Bso31I GGTCTC 1 cut(s) 333
BsoBI CYCGRG 2 cut(s) 704, 1076
Bsp1286I GDGCHC 2 cut(s) 957, 1342
Bsp143I GATC 6 cut(s) 973, 1019, 1180, 1186, 1411, 1468
BspACI CCGC 3 cut(s) 244, 310, 1097
BspANI GGCC 5 cut(s) 19, 792, 837, 1252, 1435
BspCNI CTCAG 1 cut(s) 924
BspHI TCATGA 1 cut(s) 1203
BspLI GGNNCC 2 cut(s) 793, 1334
BspMI ACCTGC 1 cut(s) 912
BspPI GGATC 3 cut(s) 1014, 1188, 1406
BspQI GCTCTTC 1 cut(s) 945
BspT107I GGYRCC 1 cut(s) 1332
BspTNI GGTCTC 1 cut(s) 333
BsrBI CCGCTC 1 cut(s) 1097
BsrDI GCAATG 1 cut(s) 245
BsrI ACTGG 2 cut(s) 37, 649
BssECI CCNNGG 1 cut(s) 1436
BssMI GATC 6 cut(s) 973, 1019, 1180, 1186, 1411, 1468
BssNAI GTATAC 1 cut(s) 998
BssNI GRCGYC 1 cut(s) 73
BssT1I CCWWGG 1 cut(s) 1436
Bst1107I GTATAC 1 cut(s) 998
Bst2UI CCWGG 2 cut(s) 344, 834
Bst4CI ACNGT 3 cut(s) 748, 1337, 1531
Bst6I CTCTTC 2 cut(s) 945, 1220
BstACI GRCGYC 1 cut(s) 73
BstBAI YACGTR 1 cut(s) 353
BstC8I GCNNGC 3 cut(s) 197, 424, 525
BstDEI CTNAG 2 cut(s) 335, 911
BstF5I GGATG 1 cut(s) 1453
BstHHI GCGC 1 cut(s) 753
BstKTI GATC 6 cut(s) 976, 1022, 1183, 1189, 1414, 1471
BstMAI GTCTC 3 cut(s) 195, 333, 1222
BstMBI GATC 6 cut(s) 973, 1019, 1180, 1186, 1411, 1468
BstMWI GCNNNNNNNGC 2 cut(s) 843, 1286
BstNI CCWGG 2 cut(s) 344, 834
BstNSI RCATGY 5 cut(s) 1215, 1260, 1350, 1364, 1496
BstPAI GACNNNNGTC 1 cut(s) 272
BstSCI CCNGG 2 cut(s) 342, 832
BstSFI CTRYAG 1 cut(s) 1547
BstV1I GCAGC 2 cut(s) 224, 227
BstX2I RGATCY 2 cut(s) 1019, 1180
BstYI RGATCY 2 cut(s) 1019, 1180
BstZ17I GTATAC 1 cut(s) 998
BsuI GTATCC 4 cut(s) 236, 629, 949, 1021
BsuRI GGCC 5 cut(s) 19, 792, 837, 1252, 1435
BtsCI GGATG 1 cut(s) 1453
BtsIMutI CAGTG 1 cut(s) 753
BveI ACCTGC 1 cut(s) 912
Cac8I GCNNGC 3 cut(s) 197, 424, 525
CciI TCATGA 1 cut(s) 1203
CfoI GCGC 1 cut(s) 753
Cfr13I GGNCC 3 cut(s) 18, 145, 791
Csp6I GTAC 5 cut(s) 126, 623, 709, 920, 1333
CviQI GTAC 5 cut(s) 126, 623, 709, 920, 1333
DdeI CTNAG 2 cut(s) 335, 911
DpnI GATC 6 cut(s) 975, 1021, 1182, 1188, 1413, 1470
DpnII GATC 6 cut(s) 973, 1019, 1180, 1186, 1411, 1468
DraI TTTAAA 1 cut(s) 652
Eam1104I CTCTTC 2 cut(s) 945, 1220
EarI CTCTTC 2 cut(s) 945, 1220
Eco130I CCWWGG 1 cut(s) 1436
Eco147I AGGCCT 1 cut(s) 837
Eco24I GRGCYC 1 cut(s) 957
Eco31I GGTCTC 1 cut(s) 333
Eco47I GGWCC 1 cut(s) 145
Eco57I CTGAAG 2 cut(s) 969, 1259
Eco88I CYCGRG 2 cut(s) 704, 1076
EcoRII CCWGG 2 cut(s) 342, 832
EcoT14I CCWWGG 1 cut(s) 1436
EcoT22I ATGCAT 1 cut(s) 1348
EcoT38I GRGCYC 1 cut(s) 957
ErhI CCWWGG 1 cut(s) 1436
FbaI TGATCA 1 cut(s) 1186
FblI GTMKAC 2 cut(s) 997, 1101
Fnu4HI GCNGC 2 cut(s) 213, 216
FokI GGATG 1 cut(s) 1460
FriOI GRGCYC 1 cut(s) 957
Fsp4HI GCNGC 2 cut(s) 213, 216
FspBI CTAG 5 cut(s) 222, 234, 528, 1067, 1437
GlaI GCGC 1 cut(s) 752
GluI GCNGC 2 cut(s) 213, 216
HaeIII GGCC 5 cut(s) 19, 792, 837, 1252, 1435
HapII CCGG 1 cut(s) 1420
HhaI GCGC 1 cut(s) 753
Hin1I GRCGYC 1 cut(s) 73
Hin6I GCGC 1 cut(s) 751
HinP1I GCGC 1 cut(s) 751
HincII GTYRAC 1 cut(s) 261
HindII GTYRAC 1 cut(s) 261
HinfI GANTC 7 cut(s) 150, 268, 281, 469, 691, 824, 1072
HpaII CCGG 1 cut(s) 1420
HphI GGTGA 4 cut(s) 299, 829, 1030, 1255
Hpy166II GTNNAC 7 cut(s) 145, 261, 623, 865, 998, 1102, 1246
Hpy188I TCNGA 4 cut(s) 78, 286, 553, 949
Hpy8I GTNNAC 7 cut(s) 145, 261, 623, 865, 998, 1102, 1246
Hpy99I CGWCG 2 cut(s) 75, 1531
HpyAV CCTTC 5 cut(s) 740, 1201, 1210, 1234, 1449
HpyCH4III ACNGT 3 cut(s) 748, 1337, 1531
HpyCH4IV ACGT 3 cut(s) 73, 352, 360
HpyCH4V TGCA 4 cut(s) 479, 678, 1346, 1501
HpyF10VI GCNNNNNNNGC 2 cut(s) 843, 1286
HpyF3I CTNAG 2 cut(s) 335, 911
HpySE526I ACGT 3 cut(s) 73, 352, 360
Hsp92I GRCGYC 1 cut(s) 73
HspAI GCGC 1 cut(s) 751
KpnI GGTACC 1 cut(s) 1336
Ksp22I TGATCA 1 cut(s) 1186
Kzo9I GATC 6 cut(s) 973, 1019, 1180, 1186, 1411, 1468
LguI GCTCTTC 1 cut(s) 945
LmnI GCTCC 3 cut(s) 458, 1094, 1163
Lsp1109I GCAGC 2 cut(s) 224, 227
MaeI CTAG 5 cut(s) 222, 234, 528, 1067, 1437
MaeII ACGT 3 cut(s) 73, 352, 360
MaeIII GTNAC 1 cut(s) 443
MalI GATC 6 cut(s) 975, 1021, 1182, 1188, 1413, 1470
MbiI CCGCTC 1 cut(s) 1097
MboI GATC 6 cut(s) 973, 1019, 1180, 1186, 1411, 1468
MboII GAAGA 6 cut(s) 16, 920, 962, 1188, 1237, 1472
MfeI CAATTG 2 cut(s) 405, 798
MflI RGATCY 2 cut(s) 1019, 1180
MhlI GDGCHC 2 cut(s) 957, 1342
MlyI GAGTC 2 cut(s) 262, 700
MmeI TCCRAC 1 cut(s) 1072
MnlI CCTC 8 cut(s) 547, 668, 805, 848, 928, 1072, 1260, 1319
Mph1103I ATGCAT 1 cut(s) 1348
MseI TTAA 6 cut(s) 324, 651, 743, 779, 960, 1509
MslI CAYNNNNRTG 2 cut(s) 522, 1347
MspI CCGG 1 cut(s) 1420
MspR9I CCNGG 2 cut(s) 344, 834
MunI CAATTG 2 cut(s) 405, 798
MvaI CCWGG 2 cut(s) 344, 834
MwoI GCNNNNNNNGC 2 cut(s) 843, 1286
NdeII GATC 6 cut(s) 973, 1019, 1180, 1186, 1411, 1468
NlaIV GGNNCC 2 cut(s) 793, 1334
NsiI ATGCAT 1 cut(s) 1348
NspI RCATGY 5 cut(s) 1215, 1260, 1350, 1364, 1496
PaeR7I CTCGAG 2 cut(s) 704, 1076
PagI TCATGA 1 cut(s) 1203
PceI AGGCCT 1 cut(s) 837
PciI ACATGT 2 cut(s) 1256, 1360
PciSI GCTCTTC 1 cut(s) 945
PfeI GAWTC 5 cut(s) 150, 281, 469, 824, 1072
PflMI CCANNNNNTGG 1 cut(s) 1259
PkrI GCNGC 2 cut(s) 214, 217
PleI GAGTC 2 cut(s) 262, 699
PpsI GAGTC 2 cut(s) 262, 699
Ppu21I YACGTR 1 cut(s) 353
PscI ACATGT 2 cut(s) 1256, 1360
PshAI GACNNNNGTC 1 cut(s) 272
Psp6I CCWGG 2 cut(s) 342, 832
PspGI CCWGG 2 cut(s) 342, 832
PspN4I GGNNCC 2 cut(s) 793, 1334
PspPI GGNCC 3 cut(s) 18, 145, 791
PsuI RGATCY 2 cut(s) 1019, 1180
RsaI GTAC 5 cut(s) 127, 624, 710, 921, 1334
RsaNI GTAC 5 cut(s) 126, 623, 709, 920, 1333
RseI CAYNNNNRTG 2 cut(s) 522, 1347
SapI GCTCTTC 1 cut(s) 945
SaqAI TTAA 6 cut(s) 324, 651, 743, 779, 960, 1509
SatI GCNGC 2 cut(s) 213, 216
Sau3AI GATC 6 cut(s) 973, 1019, 1180, 1186, 1411, 1468
Sau96I GGNCC 3 cut(s) 18, 145, 791
ScaI AGTACT 1 cut(s) 710
SchI GAGTC 2 cut(s) 262, 700
ScrFI CCNGG 2 cut(s) 344, 834
SduI GDGCHC 2 cut(s) 957, 1342
SfcI CTRYAG 1 cut(s) 1547
Sfr274I CTCGAG 2 cut(s) 704, 1076
SinI GGWCC 1 cut(s) 145
SlaI CTCGAG 2 cut(s) 704, 1076
SmiI ATTTAAAT 1 cut(s) 652
SmiMI CAYNNNNRTG 2 cut(s) 522, 1347
SmlI CTYRAG 9 cut(s) 448, 503, 593, 704, 734, 932, 1076, 1139, 1310
SmoI CTYRAG 9 cut(s) 448, 503, 593, 704, 734, 932, 1076, 1139, 1310
SpeI ACTAGT 1 cut(s) 221
SseBI AGGCCT 1 cut(s) 837
SsiI CCGC 3 cut(s) 244, 310, 1097
SspMI CTAG 5 cut(s) 222, 234, 528, 1067, 1437
StuI AGGCCT 1 cut(s) 837
StyD4I CCNGG 2 cut(s) 342, 832
StyI CCWWGG 1 cut(s) 1436
SwaI ATTTAAAT 1 cut(s) 652
TaaI ACNGT 3 cut(s) 748, 1337, 1531
TaiI ACGT 3 cut(s) 76, 355, 363
TaqI TCGA 4 cut(s) 705, 979, 1077, 1526
TaqII GACCGA 1 cut(s) 162
TatI WGTACW 1 cut(s) 708
TfiI GAWTC 5 cut(s) 150, 281, 469, 824, 1072
Tru1I TTAA 6 cut(s) 324, 651, 743, 779, 960, 1509
Tru9I TTAA 6 cut(s) 324, 651, 743, 779, 960, 1509
TscAI CASTG 1 cut(s) 753
TseI GCWGC 2 cut(s) 212, 215
TspDTI ATGAA 7 cut(s) 17, 183, 333, 461, 864, 1192, 1220
TspGWI ACGGA 1 cut(s) 1460
TspRI CASTG 1 cut(s) 753
Van91I CCANNNNNTGG 1 cut(s) 1259
VpaK11BI GGWCC 1 cut(s) 145
XapI RAATTY 7 cut(s) 287, 612, 653, 699, 766, 964, 1535
XceI RCATGY 5 cut(s) 1215, 1260, 1350, 1364, 1496
XhoI CTCGAG 2 cut(s) 704, 1076
XmaJI CCTAGG 1 cut(s) 1436
XmiI GTMKAC 2 cut(s) 997, 1101
XspI CTAG 5 cut(s) 222, 234, 528, 1067, 1437
ZraI GACGTC 1 cut(s) 74
ZrmI AGTACT 1 cut(s) 710
Zsp2I ATGCAT 1 cut(s) 1348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.