MD11G1200500.v1.1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000095
Physical Location & Seq
Forward (+)
28953019 .. 28956478
3460 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1200500.v1.1.491

Sequence Viewer

Length: 1230 bp
ATGAGTAAAAGGGTGCGCCCAGGCTCTCAATTGGCGGCGAAAAACAAGAAAGATGAGCACAACTTTGGGAAGGCAACAAGAAGAGGAAAACACTTGGGGAAAAACAAGCGCAACTGCAACGCGGTGGACAAAATCACTCGCTCTCCACATAAACTTGTATTCTCACTTTTCGTGCTAAAGGGAGCGGCCTCTACTAATAAGTGGATTCAGTTTGCAATGAATAAGAGAGTTCAAGTACTTGAGCTGGTGTTCCATATAGAATCGTATAATCGTTGGGGAGATCTGTATACATTTCCCCACAAACTATTAGGCCTTGAAAACGGTTCTACCTTGAAGCTCGAGCACATGCGTTCGGACATTCCAAGTCTACGTTCTTGTGGATACAATACTGGATTTAAGTTGCTCAGAGTTCTTCATTTCCAATTTGTTGATGTGACGGGAGAAGTTCTCGAGTACTTTTTGTCTAACTGTCCAGTTCTTGAAAGATTAACAGTGCATTCTGCTTTTACAAATTTGGTTAACTTAAGAGTTATTGGTCCGTCGGTTGCATTGAAATATTTGGATATCAAGTTTTGTCCTTACCTCCAAACCATTGAGATTTGTGATGCAAACCTCCTTTCGCTCGATTACGAGGGAAGTGCGATAAACATGCTTGTCAGTAACGTACCTCTGCTCGTTGAGGTATCCATTTCCATGTCTCTTGATTTCGCCGTGGACGGGGATGATGGTGAGATCTACTTTAAATCCGTAGAGGTTCCCTTCACCCAACTTTCATGCTGTCTTTCTCAATTGGAGGTTCTCAAGCTGGATACTGAAGGAGCGATGTACAATAGGAATCACTTGTTTCCTGTATTAACAAACCTCAAGCACTTGGAATTACGAGTTAAAGCAGATGATCGCTGGGCTCCTTGCCGTCTAACTTCTTTCATGAAGGCATCTCCTTTCTTGCAGAGACTTGTGTTGAAGATGTGTTTCAGGGCACCATCCGAATTCGATTCTGGATTGGGTGGGGGAAGAAAGAAAAAGGGGGAAGTTTTGAGACCCCCCCATTGTAACCTCAAGGTGGTCGAAATTGTAGGGTATCGTGCTCGTCCATGTGCTGCTGAACATGTCAAGTACCTGATAGAGAATGTGGTTGGACTGGAGAAAGTAGTTATTGATCCTGTGCGGCGCTGGGCGTATCAAAGTAGTGAAATCGGCAGGGGTGTTGAAGAGTTGAAAGAGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

410

Amino Acids

46.41

Weight (kDa)

9.16

Isoelectric Point (pI)

45.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 63 - 396 1.9e-32 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 66 - 206 2.8e-11 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 979
AccBSI CCGCTC 1 cut(s) 185
AccI GTMKAC 2 cut(s) 287, 367
AccII CGCG 1 cut(s) 122
AciI CCGC 4 cut(s) 35, 122, 185, 1168
AclWI GGATC 1 cut(s) 1154
AcsI RAATTY 2 cut(s) 511, 989
AcuI CTGAAG 1 cut(s) 834
AfaI GTAC 5 cut(s) 237, 455, 666, 827, 1118
AfiI CCNNNNNNNGG 2 cut(s) 717, 1063
AflII CTTAAG 1 cut(s) 523
AflIII ACRYGT 1 cut(s) 1108
AgsI TTSAA 8 cut(s) 233, 317, 334, 482, 553, 964, 1211, 1219
AjnI CCWGG 1 cut(s) 19
AjuI GAANNNNNNNTTGG 2 cut(s) 355, 387
AluBI AGCT 3 cut(s) 244, 337, 805
AluI AGCT 3 cut(s) 244, 337, 805
Alw21I GWGCWC 3 cut(s) 60, 345, 1090
Alw26I GTCTC 3 cut(s) 702, 946, 1033
AlwI GGATC 1 cut(s) 1154
Ama87I CYCGRG 2 cut(s) 338, 449
AoxI GGCC 2 cut(s) 186, 310
ApeKI GCWGC 1 cut(s) 1100
ApoI RAATTY 2 cut(s) 511, 989
AspLEI GCGC 3 cut(s) 18, 111, 1173
AspS9I GGNCC 1 cut(s) 536
AsuHPI GGTGA 2 cut(s) 740, 754
AvaI CYCGRG 2 cut(s) 338, 449
AvaII GGWCC 1 cut(s) 536
BaeGI GKGCMC 1 cut(s) 982
BanI GGYRCC 1 cut(s) 979
BanII GRGCYC 1 cut(s) 907
Bbv12I GWGCWC 3 cut(s) 60, 345, 1090
BbvI GCAGC 1 cut(s) 1087
BccI CCATC 2 cut(s) 719, 991
BceAI ACGGC 2 cut(s) 695, 897
BcgI CGANNNNNNTGC 4 cut(s) 620, 631, 654, 665
BciT130I CCWGG 1 cut(s) 21
BciVI GTATCC 3 cut(s) 374, 694, 802
BcoDI GTCTC 3 cut(s) 702, 946, 1033
BfoI RGCGCY 1 cut(s) 1174
BfrI CTTAAG 1 cut(s) 523
BfuI GTATCC 3 cut(s) 374, 694, 802
BglII AGATCT 2 cut(s) 280, 732
BisI GCNGC 4 cut(s) 36, 186, 1101, 1169
BlsI GCNGC 4 cut(s) 37, 187, 1102, 1170
BmcAI AGTACT 2 cut(s) 237, 455
Bme1390I CCNGG 1 cut(s) 21
Bme18I GGWCC 1 cut(s) 536
BmeT110I CYCGRG 2 cut(s) 338, 449
BmgT120I GGNCC 1 cut(s) 536
BmiI GGNNCC 3 cut(s) 756, 906, 981
BmrFI CCNGG 1 cut(s) 21
BmsI GCATC 2 cut(s) 595, 944
BplI GAGNNNNNCTC 2 cut(s) 432, 464
BpmI CTGGAG 1 cut(s) 1163
BpuEI CTTGAG 4 cut(s) 260, 785, 848, 1043
BsaI GGTCTC 1 cut(s) 1033
BsaJI CCNNGG 2 cut(s) 19, 711
BsaXI ACNNNNNCTCC 2 cut(s) 127, 157
Bsc4I CCNNNNNNNGG 2 cut(s) 717, 1063
Bse1I ACTGG 3 cut(s) 394, 473, 1146
Bse3DI GCAATG 1 cut(s) 222
BseBI CCWGG 1 cut(s) 21
BseDI CCNNGG 2 cut(s) 19, 711
BseGI GGATG 2 cut(s) 727, 983
BseLI CCNNNNNNNGG 2 cut(s) 717, 1063
BseMI GCAATG 1 cut(s) 222
BseMII CTCAG 1 cut(s) 418
BseNI ACTGG 3 cut(s) 394, 473, 1146
BseSI GKGCMC 1 cut(s) 982
BseXI GCAGC 1 cut(s) 1087
BseYI CCCAGC 2 cut(s) 900, 1173
Bsh1236I CGCG 1 cut(s) 122
BshFI GGCC 2 cut(s) 188, 312
BshNI GGYRCC 1 cut(s) 979
BsiHKAI GWGCWC 3 cut(s) 60, 345, 1090
BsiHKCI CYCGRG 2 cut(s) 338, 449
BslI CCNNNNNNNGG 2 cut(s) 717, 1063
BsmAI GTCTC 3 cut(s) 702, 946, 1033
BsmI GAATGC 1 cut(s) 496
BsnI GGCC 2 cut(s) 188, 312
Bso31I GGTCTC 1 cut(s) 1033
BsoBI CYCGRG 2 cut(s) 338, 449
Bsp1286I GDGCHC 5 cut(s) 60, 345, 907, 982, 1090
Bsp1407I TGTACA 1 cut(s) 825
Bsp143I GATC 4 cut(s) 280, 732, 895, 1159
BspACI CCGC 4 cut(s) 35, 122, 185, 1168
BspANI GGCC 2 cut(s) 188, 312
BspCNI CTCAG 1 cut(s) 417
BspFNI CGCG 1 cut(s) 122
BspHI TCATGA 1 cut(s) 927
BspLI GGNNCC 3 cut(s) 756, 906, 981
BspPI GGATC 1 cut(s) 1154
BspT107I GGYRCC 1 cut(s) 979
BspTI CTTAAG 1 cut(s) 523
BspTNI GGTCTC 1 cut(s) 1033
BsrBI CCGCTC 1 cut(s) 185
BsrDI GCAATG 1 cut(s) 222
BsrGI TGTACA 1 cut(s) 825
BsrI ACTGG 3 cut(s) 394, 473, 1146
BssECI CCNNGG 2 cut(s) 19, 711
BssMI GATC 4 cut(s) 280, 732, 895, 1159
BssNAI GTATAC 1 cut(s) 288
Bst1107I GTATAC 1 cut(s) 288
Bst2UI CCWGG 1 cut(s) 21
Bst4CI ACNGT 3 cut(s) 323, 470, 493
Bst6I CTCTTC 2 cut(s) 76, 1206
BstAFI CTTAAG 1 cut(s) 523
BstAUI TGTACA 1 cut(s) 825
BstDEI CTNAG 1 cut(s) 404
BstDSI CCRYGG 1 cut(s) 711
BstF5I GGATG 2 cut(s) 727, 983
BstFNI CGCG 1 cut(s) 122
BstH2I RGCGCY 1 cut(s) 1174
BstHHI GCGC 3 cut(s) 18, 111, 1173
BstKTI GATC 4 cut(s) 283, 735, 898, 1162
BstMAI GTCTC 3 cut(s) 702, 946, 1033
BstMBI GATC 4 cut(s) 280, 732, 895, 1159
BstNI CCWGG 1 cut(s) 21
BstNSI RCATGY 3 cut(s) 349, 652, 1112
BstSCI CCNGG 1 cut(s) 19
BstSLI GKGCMC 1 cut(s) 982
BstUI CGCG 1 cut(s) 122
BstV1I GCAGC 1 cut(s) 1087
BstX2I RGATCY 2 cut(s) 280, 732
BstYI RGATCY 2 cut(s) 280, 732
BstZ17I GTATAC 1 cut(s) 288
BsuI GTATCC 3 cut(s) 374, 694, 802
BsuRI GGCC 2 cut(s) 188, 312
BtgI CCRYGG 1 cut(s) 711
BtgZI GCGATG 1 cut(s) 836
BtsCI GGATG 2 cut(s) 727, 983
BtsIMutI CAGTG 1 cut(s) 498
CciI TCATGA 1 cut(s) 927
CfoI GCGC 3 cut(s) 18, 111, 1173
Cfr13I GGNCC 1 cut(s) 536
Csp6I GTAC 5 cut(s) 236, 454, 665, 826, 1117
CviAII CATG 7 cut(s) 346, 649, 694, 774, 928, 1095, 1109
CviJI RGCY 7 cut(s) 24, 188, 244, 312, 337, 805, 905
CviKI_1 RGCY 7 cut(s) 24, 188, 244, 312, 337, 805, 905
CviQI GTAC 5 cut(s) 236, 454, 665, 826, 1117
DdeI CTNAG 1 cut(s) 404
DpnI GATC 4 cut(s) 282, 734, 897, 1161
DpnII GATC 4 cut(s) 280, 732, 895, 1159
DraI TTTAAA 1 cut(s) 742
Eam1104I CTCTTC 2 cut(s) 76, 1206
EarI CTCTTC 2 cut(s) 76, 1206
Eco147I AGGCCT 1 cut(s) 312
Eco24I GRGCYC 1 cut(s) 907
Eco31I GGTCTC 1 cut(s) 1033
Eco32I GATATC 1 cut(s) 565
Eco47I GGWCC 1 cut(s) 536
Eco57I CTGAAG 1 cut(s) 834
Eco88I CYCGRG 2 cut(s) 338, 449
EcoRI GAATTC 1 cut(s) 989
EcoRII CCWGG 1 cut(s) 19
EcoRV GATATC 1 cut(s) 565
EcoT38I GRGCYC 1 cut(s) 907
FaeI CATG 7 cut(s) 349, 652, 697, 777, 931, 1098, 1112
FatI CATG 7 cut(s) 345, 648, 693, 773, 927, 1094, 1108
FblI GTMKAC 2 cut(s) 287, 367
Fnu4HI GCNGC 4 cut(s) 36, 186, 1101, 1169
FokI GGATG 2 cut(s) 734, 970
FriOI GRGCYC 1 cut(s) 907
Fsp4HI GCNGC 4 cut(s) 36, 186, 1101, 1169
GlaI GCGC 3 cut(s) 17, 110, 1172
GluI GCNGC 4 cut(s) 36, 186, 1101, 1169
GsaI CCCAGC 2 cut(s) 904, 1177
GsuI CTGGAG 1 cut(s) 1163
HaeII RGCGCY 1 cut(s) 1174
HaeIII GGCC 2 cut(s) 188, 312
HhaI GCGC 3 cut(s) 18, 111, 1173
Hin1II CATG 7 cut(s) 349, 652, 697, 777, 931, 1098, 1112
Hin6I GCGC 3 cut(s) 16, 109, 1171
HinP1I GCGC 3 cut(s) 16, 109, 1171
HincII GTYRAC 1 cut(s) 520
HindII GTYRAC 1 cut(s) 520
HinfI GANTC 4 cut(s) 205, 260, 835, 995
HpaI GTTAAC 1 cut(s) 520
HphI GGTGA 2 cut(s) 740, 754
Hpy166II GTNNAC 5 cut(s) 127, 288, 368, 520, 715
Hpy188I TCNGA 3 cut(s) 355, 407, 988
Hpy188III TCNNGA 5 cut(s) 449, 479, 701, 928, 999
Hpy8I GTNNAC 5 cut(s) 127, 288, 368, 520, 715
Hpy99I CGWCG 1 cut(s) 544
HpyAV CCTTC 4 cut(s) 64, 769, 809, 925
HpyCH4III ACNGT 3 cut(s) 323, 470, 493
HpyCH4IV ACGT 2 cut(s) 370, 663
HpyCH4V TGCA 6 cut(s) 117, 215, 496, 548, 608, 949
HpyF3I CTNAG 1 cut(s) 404
HpySE526I ACGT 2 cut(s) 370, 663
Hsp92II CATG 7 cut(s) 349, 652, 697, 777, 931, 1098, 1112
HspAI GCGC 3 cut(s) 16, 109, 1171
KspAI GTTAAC 1 cut(s) 520
Kzo9I GATC 4 cut(s) 280, 732, 895, 1159
LmnI GCTCC 3 cut(s) 182, 818, 910
Lsp1109I GCAGC 1 cut(s) 1087
LweI GCATC 2 cut(s) 595, 944
MaeII ACGT 2 cut(s) 370, 663
MaeIII GTNAC 3 cut(s) 433, 659, 1052
MalI GATC 4 cut(s) 282, 734, 897, 1161
MbiI CCGCTC 1 cut(s) 185
MboI GATC 4 cut(s) 280, 732, 895, 1159
MboII GAAGA 5 cut(s) 93, 404, 976, 1026, 1223
MfeI CAATTG 2 cut(s) 29, 788
MflI RGATCY 2 cut(s) 280, 732
MhlI GDGCHC 5 cut(s) 60, 345, 907, 982, 1090
MluCI AATT 7 cut(s) 29, 422, 511, 788, 875, 989, 1071
MmeI TCCRAC 1 cut(s) 1117
MseI TTAA 7 cut(s) 396, 488, 519, 524, 741, 854, 885
MslI CAYNNNNRTG 1 cut(s) 692
MspCI CTTAAG 1 cut(s) 523
MspR9I CCNGG 1 cut(s) 21
MunI CAATTG 2 cut(s) 29, 788
Mva1269I GAATGC 1 cut(s) 496
MvaI CCWGG 1 cut(s) 21
MvnI CGCG 1 cut(s) 122
NdeII GATC 4 cut(s) 280, 732, 895, 1159
NlaIII CATG 7 cut(s) 349, 652, 697, 777, 931, 1098, 1112
NlaIV GGNNCC 3 cut(s) 756, 906, 981
NmuCI GTSAC 1 cut(s) 433
NspI RCATGY 3 cut(s) 349, 652, 1112
PaeR7I CTCGAG 2 cut(s) 338, 449
PagI TCATGA 1 cut(s) 927
PceI AGGCCT 1 cut(s) 312
PciI ACATGT 1 cut(s) 1108
PctI GAATGC 1 cut(s) 496
PfeI GAWTC 4 cut(s) 205, 260, 835, 995
PkrI GCNGC 4 cut(s) 37, 187, 1102, 1170
PscI ACATGT 1 cut(s) 1108
Psp6I CCWGG 1 cut(s) 19
PspFI CCCAGC 2 cut(s) 900, 1173
PspGI CCWGG 1 cut(s) 19
PspN4I GGNNCC 3 cut(s) 756, 906, 981
PspPI GGNCC 1 cut(s) 536
PspXI VCTCGAGB 1 cut(s) 338
PsuI RGATCY 2 cut(s) 280, 732
RsaI GTAC 5 cut(s) 237, 455, 666, 827, 1118
RsaNI GTAC 5 cut(s) 236, 454, 665, 826, 1117
RseI CAYNNNNRTG 1 cut(s) 692
SaqAI TTAA 7 cut(s) 396, 488, 519, 524, 741, 854, 885
SatI GCNGC 4 cut(s) 36, 186, 1101, 1169
Sau3AI GATC 4 cut(s) 280, 732, 895, 1159
Sau96I GGNCC 1 cut(s) 536
ScaI AGTACT 2 cut(s) 237, 455
ScrFI CCNGG 1 cut(s) 21
SduI GDGCHC 5 cut(s) 60, 345, 907, 982, 1090
SfaNI GCATC 2 cut(s) 595, 944
Sfr274I CTCGAG 2 cut(s) 338, 449
SinI GGWCC 1 cut(s) 536
SlaI CTCGAG 2 cut(s) 338, 449
SmiMI CAYNNNNRTG 1 cut(s) 692
SmlI CTYRAG 7 cut(s) 239, 338, 449, 523, 800, 863, 1058
SmoI CTYRAG 7 cut(s) 239, 338, 449, 523, 800, 863, 1058
Sse9I AATT 7 cut(s) 29, 422, 511, 788, 875, 989, 1071
SseBI AGGCCT 1 cut(s) 312
SsiI CCGC 4 cut(s) 35, 122, 185, 1168
SspI AATATT 1 cut(s) 557
StuI AGGCCT 1 cut(s) 312
StyD4I CCNGG 1 cut(s) 19
TaaI ACNGT 3 cut(s) 323, 470, 493
TaiI ACGT 2 cut(s) 373, 666
TaqI TCGA 5 cut(s) 339, 450, 624, 993, 1068
TasI AATT 7 cut(s) 29, 422, 511, 788, 875, 989, 1071
TatI WGTACW 3 cut(s) 235, 453, 825
TauI GCSGC 3 cut(s) 38, 188, 1171
TfiI GAWTC 4 cut(s) 205, 260, 835, 995
Tru1I TTAA 7 cut(s) 396, 488, 519, 524, 741, 854, 885
Tru9I TTAA 7 cut(s) 396, 488, 519, 524, 741, 854, 885
TscAI CASTG 1 cut(s) 498
TseFI GTSAC 1 cut(s) 433
TseI GCWGC 1 cut(s) 1100
Tsp45I GTSAC 1 cut(s) 433
TspDTI ATGAA 5 cut(s) 233, 404, 762, 916, 944
TspGWI ACGGA 2 cut(s) 528, 736
TspRI CASTG 1 cut(s) 498
Vha464I CTTAAG 1 cut(s) 523
VpaK11BI GGWCC 1 cut(s) 536
XapI RAATTY 2 cut(s) 511, 989
XceI RCATGY 3 cut(s) 349, 652, 1112
XhoI CTCGAG 2 cut(s) 338, 449
XmiI GTMKAC 2 cut(s) 287, 367
ZrmI AGTACT 2 cut(s) 237, 455
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.