MD15G1437600.v1.1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000095
Physical Location & Seq
Forward (+)
53753650 .. 53754999
1350 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1437600.v1.1.491

Sequence Viewer

Length: 1350 bp
ATGACGAAACGAAAGCGTGGGGTGGTGATGGCAGACCGAATCAGCGAGTTGCCAGATGAAGTTCTTGTTAGCATAGTGTCTCTCTTGTCGCTAAGGGAAGCAGCAGCTATGCGTATCCTTTCTACGCGATGGAGGAATGTATGGAAATCAACTTGGACCCTCAATTTCGATGCGGATCCTAAAGCTTTGGAAAGGGAAAGGTACGTCACTGACGCTGAAACCTTAAAAGAAAGGTACGTCAAGTGGGTGGATAGTACTTTGGAACAGCACCAAGGAATGAGTATCGAACAATTTAGGATTTGTTTTAACCTCAACGAGAGATTTTCAAGTTCCGTTGATAAATGGGTTCGATTTGCAATGAAAAAAAGAGTTCAAATTCTTGAGTTGAACTTCTTAGAAGAATTTCCTCCGACATATGAGGGTGCTCTGCTCCACGTACCATGCTATACTTTTTCTCCCCGCCAACTTTTAGGTGGTGTTCCTAGTCTACAACCTTGTTCCGACGTTGGCTTCAACTTCCTCAGAGTTGTAAAGTTCAAAAACGTTTGTCTTGCTGGAGGTCTCGAGTACTTTTTGTCTAACTGTCCAGCTCTCGAACGATTAACAATATATCGTGTTCTAGATTTGCATAAGCTGAGAGTTGTCGGTCTGTCAATTCCGTTGAAGTACTTGGTCATAAGAGGTTGTGACAATATCGAAAGCATTCTGATACGTGATGCAAATCTTGTTTCATTCACTTATCATGGACTTAAGATGAACTTGATTACTAGGAATGTACCGCTGCTCACTGAAGTATCCATCGGTGGGTACCCAAAAGTTGATTTTCTCAAAGTTGCCTTCACCCAACTTGAATCTTGTCGTTCTCAGCTACAGATTCTCAAACTGCTCCAGTATAAAATCCCCTACGACGAGGATCGTGTTTTTCCTATCTTCTCAAGTCTCAAGCAACTGGAAATTGCCGTCACAGATCAAGATTATTGGCGTCTTCATCTATTAACATCCTTCATTGAGGCATCTCCTTGCTTGCACAAACTGGTGTTGCACTTGCATCACTCATCTTTTACTGGTCAAAGAAAAATATTCAAGAGAGCCGAATGCTCCCATCGTTACCTCAAGGTTGTGGAGATGGTAGGGTACGATGGTAGCACAGGTGATTTTGGACTTGTCAAGTACTTGACAAAAACTGCTGTCAACCTGGAGGAAATCGGTGTTAGTCATTTCAAGAGTTGGTTTTACCATTACACAGACGAGAAACCGGAAGAATCAGAAAGGAATCGTGCTATGAAGGATCGTGCTATGAAAGAGCTGAAACAAATAGTGCCATCAACTGTAAAACTAGTATGCTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

450

Amino Acids

52.06

Weight (kDa)

9.04

Isoelectric Point (pI)

40.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 14 - 50 5.2e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 87 - 436 7.7e-29 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 112 - 346 2.3e-09 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 807
AccB1I GGYRCC 1 cut(s) 807
AccI GTMKAC 1 cut(s) 487
AccII CGCG 1 cut(s) 127
AciI CCGC 3 cut(s) 173, 460, 779
AclI AACGTT 1 cut(s) 543
AclWI GGATC 4 cut(s) 170, 183, 921, 1296
AcsI RAATTY 2 cut(s) 375, 401
AcuI CTGAAG 1 cut(s) 810
AcyI GRCGYC 1 cut(s) 982
AfiI CCNNNNNNNGG 1 cut(s) 804
AflII CTTAAG 1 cut(s) 749
AgsI TTSAA 9 cut(s) 327, 374, 388, 514, 538, 664, 851, 1084, 1222
AhlI ACTAGT 1 cut(s) 1336
AjnI CCWGG 1 cut(s) 1194
AluBI AGCT 6 cut(s) 107, 185, 590, 634, 868, 1306
AluI AGCT 6 cut(s) 107, 185, 590, 634, 868, 1306
Alw21I GWGCWC 1 cut(s) 427
Alw26I GTCTC 3 cut(s) 84, 566, 944
AlwI GGATC 4 cut(s) 170, 183, 921, 1296
Ama87I CYCGRG 1 cut(s) 563
ApeKI GCWGC 3 cut(s) 101, 104, 781
ApoI RAATTY 2 cut(s) 375, 401
Asp700I GAANNNNTTC 2 cut(s) 402, 702
Asp718I GGTACC 1 cut(s) 807
AspS9I GGNCC 1 cut(s) 156
AsuHPI GGTGA 3 cut(s) 37, 832, 1163
AvaI CYCGRG 1 cut(s) 563
AvaII GGWCC 1 cut(s) 156
BaeI ACNNNNGTAYC 4 cut(s) 777, 810, 1126, 1159
BamHI GGATCC 1 cut(s) 175
BanI GGYRCC 1 cut(s) 807
BbsI GAAGAC 1 cut(s) 977
Bbv12I GWGCWC 1 cut(s) 427
BbvI GCAGC 3 cut(s) 113, 116, 768
BccI CCATC 7 cut(s) 22, 123, 806, 1110, 1120, 1133, 1330
BceAI ACGGC 1 cut(s) 944
BciT130I CCWGG 1 cut(s) 1196
BciVI GTATCC 2 cut(s) 125, 805
BcoDI GTCTC 3 cut(s) 84, 566, 944
BcuI ACTAGT 1 cut(s) 1336
BfaI CTAG 4 cut(s) 483, 620, 768, 1337
BfmI CTRYAG 1 cut(s) 869
BfrI CTTAAG 1 cut(s) 749
BfuI GTATCC 2 cut(s) 125, 805
BisI GCNGC 3 cut(s) 102, 105, 782
BlsI GCNGC 3 cut(s) 103, 106, 783
BmcAI AGTACT 4 cut(s) 256, 569, 668, 1172
Bme1390I CCNGG 1 cut(s) 1196
Bme18I GGWCC 1 cut(s) 156
BmeT110I CYCGRG 1 cut(s) 563
BmgT120I GGNCC 1 cut(s) 156
BmiI GGNNCC 3 cut(s) 158, 177, 809
BmrFI CCNGG 1 cut(s) 1196
BmsI GCATC 4 cut(s) 160, 706, 1022, 1057
BpiI GAAGAC 1 cut(s) 977
BpmI CTGGAG 3 cut(s) 576, 872, 1217
Bpu10I CCTNAGC 1 cut(s) 92
BpuEI CTTGAG 4 cut(s) 401, 919, 926, 1097
BsaAI YACGTR 2 cut(s) 436, 713
BsaBI GATNNNNATC 2 cut(s) 174, 720
BsaHI GRCGYC 1 cut(s) 982
BsaI GGTCTC 1 cut(s) 566
BsaJI CCNNGG 1 cut(s) 271
BsaWI WCCGGW 1 cut(s) 1255
BsaXI ACNNNNNCTCC 2 cut(s) 439, 469
Bsc4I CCNNNNNNNGG 1 cut(s) 804
Bse1I ACTGG 4 cut(s) 889, 954, 1038, 1069
Bse3DI GCAATG 1 cut(s) 363
Bse8I GATNNNNATC 2 cut(s) 174, 720
BseBI CCWGG 1 cut(s) 1196
BseDI CCNNGG 1 cut(s) 271
BseGI GGATG 1 cut(s) 998
BseJI GATNNNNATC 2 cut(s) 174, 720
BseLI CCNNNNNNNGG 1 cut(s) 804
BseMI GCAATG 1 cut(s) 363
BseMII CTCAG 3 cut(s) 535, 626, 878
BseNI ACTGG 4 cut(s) 889, 954, 1038, 1069
BseXI GCAGC 3 cut(s) 113, 116, 768
Bsh1236I CGCG 1 cut(s) 127
BshNI GGYRCC 1 cut(s) 807
BsiHKAI GWGCWC 1 cut(s) 427
BsiHKCI CYCGRG 1 cut(s) 563
BsiSI CCGG 1 cut(s) 1256
BslI CCNNNNNNNGG 1 cut(s) 804
BsmAI GTCTC 3 cut(s) 84, 566, 944
BsmI GAATGC 2 cut(s) 702, 1100
Bso31I GGTCTC 1 cut(s) 566
BsoBI CYCGRG 1 cut(s) 563
Bsp1286I GDGCHC 1 cut(s) 427
Bsp143I GATC 4 cut(s) 175, 913, 967, 1288
BspACI CCGC 3 cut(s) 173, 460, 779
BspCNI CTCAG 3 cut(s) 534, 627, 877
BspFNI CGCG 1 cut(s) 127
BspLI GGNNCC 3 cut(s) 158, 177, 809
BspPI GGATC 4 cut(s) 170, 183, 921, 1296
BspT107I GGYRCC 1 cut(s) 807
BspTI CTTAAG 1 cut(s) 749
BspTNI GGTCTC 1 cut(s) 566
BsrDI GCAATG 1 cut(s) 363
BsrI ACTGG 4 cut(s) 889, 954, 1038, 1069
BssECI CCNNGG 1 cut(s) 271
BssMI GATC 4 cut(s) 175, 913, 967, 1288
BssNI GRCGYC 1 cut(s) 982
BssT1I CCWWGG 1 cut(s) 271
Bst2UI CCWGG 1 cut(s) 1196
Bst4CI ACNGT 2 cut(s) 584, 1330
BstACI GRCGYC 1 cut(s) 982
BstAFI CTTAAG 1 cut(s) 749
BstBAI YACGTR 2 cut(s) 436, 713
BstC8I GCNNGC 1 cut(s) 1025
BstDEI CTNAG 5 cut(s) 92, 394, 521, 635, 864
BstF5I GGATG 1 cut(s) 998
BstFNI CGCG 1 cut(s) 127
BstKTI GATC 4 cut(s) 178, 916, 970, 1291
BstMAI GTCTC 3 cut(s) 84, 566, 944
BstMBI GATC 4 cut(s) 175, 913, 967, 1288
BstNI CCWGG 1 cut(s) 1196
BstSCI CCNGG 1 cut(s) 1194
BstSFI CTRYAG 1 cut(s) 869
BstUI CGCG 1 cut(s) 127
BstV1I GCAGC 3 cut(s) 113, 116, 768
BstV2I GAAGAC 1 cut(s) 977
BstX2I RGATCY 1 cut(s) 175
BstYI RGATCY 1 cut(s) 175
BsuI GTATCC 2 cut(s) 125, 805
BtgZI GCGATG 1 cut(s) 142
BtsCI GGATG 1 cut(s) 998
BtsIMutI CAGTG 2 cut(s) 207, 786
Cac8I GCNNGC 1 cut(s) 1025
Cfr13I GGNCC 1 cut(s) 156
CseI GACGC 2 cut(s) 221, 971
CviAII CATG 2 cut(s) 441, 743
CviJI RGCY 8 cut(s) 107, 185, 510, 590, 634, 868, 1091, 1306
CviKI_1 RGCY 8 cut(s) 107, 185, 510, 590, 634, 868, 1091, 1306
DdeI CTNAG 5 cut(s) 92, 394, 521, 635, 864
DpnI GATC 4 cut(s) 177, 915, 969, 1290
DpnII GATC 4 cut(s) 175, 913, 967, 1288
Eco130I CCWWGG 1 cut(s) 271
Eco31I GGTCTC 1 cut(s) 566
Eco47I GGWCC 1 cut(s) 156
Eco57I CTGAAG 1 cut(s) 810
Eco88I CYCGRG 1 cut(s) 563
EcoRII CCWGG 1 cut(s) 1194
EcoT14I CCWWGG 1 cut(s) 271
ErhI CCWWGG 1 cut(s) 271
FaeI CATG 2 cut(s) 444, 746
FalI AAGNNNNNCTT 2 cut(s) 743, 775
FatI CATG 2 cut(s) 440, 742
FauI CCCGC 1 cut(s) 467
FauNDI CATATG 1 cut(s) 415
FblI GTMKAC 1 cut(s) 487
Fnu4HI GCNGC 3 cut(s) 102, 105, 782
FokI GGATG 1 cut(s) 985
Fsp4HI GCNGC 3 cut(s) 102, 105, 782
FspBI CTAG 4 cut(s) 483, 620, 768, 1337
GluI GCNGC 3 cut(s) 102, 105, 782
GsuI CTGGAG 3 cut(s) 576, 872, 1217
HapII CCGG 1 cut(s) 1256
HgaI GACGC 2 cut(s) 221, 971
Hin1I GRCGYC 1 cut(s) 982
Hin1II CATG 2 cut(s) 444, 746
HincII GTYRAC 1 cut(s) 1192
HindII GTYRAC 1 cut(s) 1192
HindIII AAGCTT 1 cut(s) 183
HinfI GANTC 5 cut(s) 39, 851, 874, 1262, 1273
HpaII CCGG 1 cut(s) 1256
HphI GGTGA 3 cut(s) 37, 832, 1163
Hpy166II GTNNAC 2 cut(s) 488, 1192
Hpy188I TCNGA 5 cut(s) 411, 502, 524, 708, 1267
Hpy188III TCNNGA 7 cut(s) 380, 563, 593, 620, 971, 1084, 1222
Hpy8I GTNNAC 2 cut(s) 488, 1192
Hpy99I CGWCG 2 cut(s) 506, 911
HpyAV CCTTC 3 cut(s) 847, 1012, 1279
HpyCH4III ACNGT 2 cut(s) 584, 1330
HpyCH4IV ACGT 6 cut(s) 204, 237, 435, 504, 543, 712
HpyCH4V TGCA 6 cut(s) 356, 628, 719, 1027, 1042, 1048
HpyF3I CTNAG 5 cut(s) 92, 394, 521, 635, 864
HpySE526I ACGT 6 cut(s) 204, 237, 435, 504, 543, 712
Hsp92I GRCGYC 1 cut(s) 982
Hsp92II CATG 2 cut(s) 444, 746
KpnI GGTACC 1 cut(s) 811
Kzo9I GATC 4 cut(s) 175, 913, 967, 1288
LmnI GCTCC 3 cut(s) 435, 891, 1103
Lsp1109I GCAGC 3 cut(s) 113, 116, 768
LweI GCATC 4 cut(s) 160, 706, 1022, 1057
MaeI CTAG 4 cut(s) 483, 620, 768, 1337
MaeII ACGT 6 cut(s) 204, 237, 435, 504, 543, 712
MaeIII GTNAC 4 cut(s) 205, 686, 961, 1106
MalI GATC 4 cut(s) 177, 915, 969, 1290
MboI GATC 4 cut(s) 175, 913, 967, 1288
MboII GAAGA 4 cut(s) 410, 922, 977, 1271
MflI RGATCY 1 cut(s) 175
MhlI GDGCHC 1 cut(s) 427
MluCI AATT 6 cut(s) 163, 290, 375, 401, 654, 954
MmeI TCCRAC 2 cut(s) 434, 525
MroXI GAANNNNTTC 2 cut(s) 402, 702
MseI TTAA 5 cut(s) 224, 306, 602, 750, 995
MspA1I CMGCKG 1 cut(s) 781
MspCI CTTAAG 1 cut(s) 749
MspI CCGG 1 cut(s) 1256
MspR9I CCNGG 1 cut(s) 1196
Mva1269I GAATGC 2 cut(s) 702, 1100
MvaI CCWGG 1 cut(s) 1196
MvnI CGCG 1 cut(s) 127
NdeI CATATG 1 cut(s) 415
NdeII GATC 4 cut(s) 175, 913, 967, 1288
NlaIII CATG 2 cut(s) 444, 746
NlaIV GGNNCC 3 cut(s) 158, 177, 809
NmuCI GTSAC 3 cut(s) 205, 686, 961
PaeR7I CTCGAG 1 cut(s) 563
PctI GAATGC 2 cut(s) 702, 1100
PdmI GAANNNNTTC 2 cut(s) 402, 702
PfeI GAWTC 5 cut(s) 39, 851, 874, 1262, 1273
PkrI GCNGC 3 cut(s) 103, 106, 783
Ppu21I YACGTR 2 cut(s) 436, 713
Psp1406I AACGTT 1 cut(s) 543
Psp6I CCWGG 1 cut(s) 1194
PspGI CCWGG 1 cut(s) 1194
PspN4I GGNNCC 3 cut(s) 158, 177, 809
PspPI GGNCC 1 cut(s) 156
PsuI RGATCY 1 cut(s) 175
SaqAI TTAA 5 cut(s) 224, 306, 602, 750, 995
SatI GCNGC 3 cut(s) 102, 105, 782
Sau3AI GATC 4 cut(s) 175, 913, 967, 1288
Sau96I GGNCC 1 cut(s) 156
ScaI AGTACT 4 cut(s) 256, 569, 668, 1172
ScrFI CCNGG 1 cut(s) 1196
SduI GDGCHC 1 cut(s) 427
SfaNI GCATC 4 cut(s) 160, 706, 1022, 1057
SfcI CTRYAG 1 cut(s) 869
Sfr274I CTCGAG 1 cut(s) 563
SinI GGWCC 1 cut(s) 156
SlaI CTCGAG 1 cut(s) 563
SmlI CTYRAG 6 cut(s) 380, 563, 749, 934, 941, 1112
SmoI CTYRAG 6 cut(s) 380, 563, 749, 934, 941, 1112
SpeI ACTAGT 1 cut(s) 1336
Sse9I AATT 6 cut(s) 163, 290, 375, 401, 654, 954
SsiI CCGC 3 cut(s) 173, 460, 779
SspI AATATT 1 cut(s) 1080
SspMI CTAG 4 cut(s) 483, 620, 768, 1337
StyD4I CCNGG 1 cut(s) 1194
StyI CCWWGG 1 cut(s) 271
TaaI ACNGT 2 cut(s) 584, 1330
TaiI ACGT 6 cut(s) 207, 240, 438, 507, 546, 715
TaqI TCGA 6 cut(s) 168, 285, 349, 564, 594, 696
TaqII GACCGA 2 cut(s) 51, 635
TasI AATT 6 cut(s) 163, 290, 375, 401, 654, 954
TatI WGTACW 4 cut(s) 254, 567, 666, 1170
TfiI GAWTC 5 cut(s) 39, 851, 874, 1262, 1273
Tru1I TTAA 5 cut(s) 224, 306, 602, 750, 995
Tru9I TTAA 5 cut(s) 224, 306, 602, 750, 995
TscAI CASTG 2 cut(s) 214, 793
TseFI GTSAC 3 cut(s) 205, 686, 961
TseI GCWGC 3 cut(s) 101, 104, 781
Tsp45I GTSAC 3 cut(s) 205, 686, 961
TspDTI ATGAA 8 cut(s) 72, 374, 720, 770, 977, 994, 1298, 1313
TspGWI ACGGA 2 cut(s) 322, 648
TspRI CASTG 2 cut(s) 214, 793
Vha464I CTTAAG 1 cut(s) 749
VpaK11BI GGWCC 1 cut(s) 156
XapI RAATTY 2 cut(s) 375, 401
XbaI TCTAGA 1 cut(s) 619
XcmI CCANNNNNNNNNTGG 1 cut(s) 470
XhoI CTCGAG 1 cut(s) 563
XmiI GTMKAC 1 cut(s) 487
XmnI GAANNNNTTC 2 cut(s) 402, 702
XspI CTAG 4 cut(s) 483, 620, 768, 1337
ZrmI AGTACT 4 cut(s) 256, 569, 668, 1172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.