Rh7DG167300

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000095
Physical Location & Seq
Forward (+)
15027019 .. 15030647
3629 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG167300.1

Sequence Viewer

Length: 1341 bp
ATGCCGGATGAAATTGTAGTGAGTATACTGTCTTTCTTGCCCCTGAAGGAAGCACAGGCTACTTGCATCTTGTCTAGGAGGTGGCATTATGTGTGGGCGTCTCTCATGACTCTCAACTTTGACACCAAGAAAAGGTTGAGCACCTTGAAGGGTCTGAAGCCGAAAGAACGAGACCAGGGCCTTATCAAGAGGTATGCTAAGTGGGTCAACAGCGTGGTTGAACAGCATAGAGCCCCATGCATTGACCAGTTCCGTGTTTCGTTTTATCTAGACAAGAGTTTTTCGACTTCTATTGATAAGTGGGTTGAGTTTGCACTGAAAAAGGGTGTTCAAATGCTGGAGCTGAATTTGTTAGAATATGTCTATTATTGCAAGATCAAACCGGGATATCCTTTTCCCCAGCAACTTTTGGGTCTCAACAGAGAAGGTGCAGAGTCTGCTTGGAAGCACTTGTGTCGTGATGGTCCAAGTCATCAACCCTGCGTGTGCGTTGGCTTGAAGTCACTCAGGGTTCTTACCTTGGAATGTGTTGACATCTCTGGAGACGTTCTCGAGTACTTTTTGCGCACTTGTCCGGTTCTGGAAAGGGTTTCGGTGTATGGTTCCTCAACATTGGTTTATCTACGAGTTGTCGGTCCATCAATTGCATTGAAGCACTTAGTGATACAAAGATGTAGCAACGTCGTAGGCATTGAGATTGTTGATGCAGATGTCATTTCCTTTACTTATGATGGTGGGGAGGGAATACATTTGCGTCTTGAGAATGTGCCGCATCTTGTTGAGGTATCCATTTATGAGCACCGTGAATATTACTCTTTTTTAAGCATTGATGTTCTCTTTGCCAGCCTTTCCTCCTGTGTTTCTCAGCTGGAGATTCTGAAAATGAATAATACGATACTGTACTACAGGGAGAGTTATATGGTTCCCATGTTACCAAATCTCAAGCTTTTGGGATTATCCTTTAAGGATGATGAGGCACTAATGCAATTGGCTTCCTTCTTGAAATCATCTCCTTGCGTTGAAAGGCTTGTGATACATTTGCACTACTCAATATCAAATCGAAAAAAATGCCACTTTAAGAATAAGAAAGCTGCCAAATGCTCCCATGCAGATCTCAAGGCCGTGAAATTGGTAGGTTATGATGGCAGCACGCGCGAAGATGAAATTGTCAAGTACTTGACAAAAACTGCGATCAACTTGGAACAAATTGTTATCGATCCTGCCCGGAATTGGCTTTATAGAATACCAAAAAGGAAGGATGCAATGAGAAGAGAAGAACAAGTAAGGGCTCATTTTCGGCAGCTCAAAGTGCCTTCAAATATAGACTTTGTATGCTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

446

Amino Acids

51.32

Weight (kDa)

9.0

Isoelectric Point (pI)

35.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 81 - 412 6e-30 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 98 - 345 2.6e-14 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 566
AccI GTMKAC 1 cut(s) 25
AccII CGCG 2 cut(s) 1153, 1155
AciI CCGC 1 cut(s) 770
AclWI GGATC 1 cut(s) 1211
AcsI RAATTY 1 cut(s) 346
AcuI CTGAAG 2 cut(s) 65, 176
AcyI GRCGYC 1 cut(s) 98
AdeI CACNNNGTG 1 cut(s) 661
AfaI GTAC 3 cut(s) 557, 902, 1175
AfiI CCNNNNNNNGG 2 cut(s) 132, 1230
AgsI TTSAA 8 cut(s) 148, 221, 332, 499, 652, 1003, 1022, 1317
AjnI CCWGG 1 cut(s) 174
AluBI AGCT 5 cut(s) 343, 868, 946, 1091, 1303
AluI AGCT 5 cut(s) 343, 868, 946, 1091, 1303
Alw21I GWGCWC 2 cut(s) 143, 801
Alw26I GTCTC 4 cut(s) 105, 165, 419, 537
AlwI GGATC 1 cut(s) 1211
AlwNI CAGNNNCTG 1 cut(s) 437
Ama87I CYCGRG 1 cut(s) 551
AoxI GGCC 2 cut(s) 178, 1119
ApeKI GCWGC 3 cut(s) 1091, 1146, 1300
ApoI RAATTY 1 cut(s) 346
AspLEI GCGC 2 cut(s) 567, 1155
AspS9I GGNCC 3 cut(s) 178, 464, 635
AsuC2I CCSGG 2 cut(s) 384, 1225
AvaI CYCGRG 1 cut(s) 551
AvaII GGWCC 2 cut(s) 464, 635
BanII GRGCYC 2 cut(s) 235, 1291
Bbv12I GWGCWC 2 cut(s) 143, 801
BbvI GCAGC 3 cut(s) 1078, 1158, 1312
BccI CCATC 4 cut(s) 455, 646, 725, 1136
BceAI ACGGC 1 cut(s) 1106
BcgI CGANNNNNNTGC 4 cut(s) 437, 471, 1050, 1084
BciT130I CCWGG 1 cut(s) 176
BciVI GTATCC 1 cut(s) 796
BcnI CCSGG 2 cut(s) 384, 1225
BcoDI GTCTC 4 cut(s) 105, 165, 419, 537
BfaI CTAG 2 cut(s) 75, 269
BfmI CTRYAG 1 cut(s) 904
BfuI GTATCC 1 cut(s) 796
BglII AGATCT 1 cut(s) 1111
BisI GCNGC 4 cut(s) 770, 1092, 1147, 1301
BlsI GCNGC 4 cut(s) 771, 1093, 1148, 1302
BmcAI AGTACT 2 cut(s) 557, 1175
Bme1390I CCNGG 3 cut(s) 176, 384, 1225
Bme18I GGWCC 2 cut(s) 464, 635
BmeT110I CYCGRG 1 cut(s) 551
BmgT120I GGNCC 3 cut(s) 178, 464, 635
BmiI GGNNCC 2 cut(s) 604, 924
BmrFI CCNGG 3 cut(s) 176, 384, 1225
BmsI GCATC 4 cut(s) 75, 694, 781, 1249
BplI GAGNNNNNCTC 2 cut(s) 534, 566
BpmI CTGGAG 3 cut(s) 359, 561, 890
BpuEI CTTGAG 3 cut(s) 779, 926, 1100
BpuMI CCSGG 2 cut(s) 384, 1225
Bsa29I ATCGAT 1 cut(s) 1215
BsaHI GRCGYC 1 cut(s) 98
BsaI GGTCTC 2 cut(s) 165, 419
BsaJI CCNNGG 2 cut(s) 175, 519
BsaWI WCCGGW 1 cut(s) 574
Bsc4I CCNNNNNNNGG 2 cut(s) 132, 1230
Bse1I ACTGG 1 cut(s) 247
Bse3DI GCAATG 1 cut(s) 1269
BseBI CCWGG 1 cut(s) 176
BseCI ATCGAT 1 cut(s) 1215
BseDI CCNNGG 2 cut(s) 175, 519
BseGI GGATG 3 cut(s) 13, 973, 1264
BseLI CCNNNNNNNGG 2 cut(s) 132, 1230
BseMI GCAATG 1 cut(s) 1269
BseMII CTCAG 2 cut(s) 520, 878
BseNI ACTGG 1 cut(s) 247
BseXI GCAGC 3 cut(s) 1078, 1158, 1312
BseYI CCCAGC 1 cut(s) 399
BsgI GTGCAG 1 cut(s) 450
Bsh1236I CGCG 2 cut(s) 1153, 1155
BshFI GGCC 2 cut(s) 180, 1121
BshVI ATCGAT 1 cut(s) 1215
BsiHKAI GWGCWC 2 cut(s) 143, 801
BsiHKCI CYCGRG 1 cut(s) 551
BsiSI CCGG 4 cut(s) 5, 383, 575, 1225
BslI CCNNNNNNNGG 2 cut(s) 132, 1230
BsmAI GTCTC 4 cut(s) 105, 165, 419, 537
BsmBI CGTCTC 2 cut(s) 105, 537
BsnI GGCC 2 cut(s) 180, 1121
Bso31I GGTCTC 2 cut(s) 165, 419
BsoBI CYCGRG 1 cut(s) 551
Bsp1286I GDGCHC 4 cut(s) 143, 235, 801, 1291
Bsp143I GATC 4 cut(s) 375, 1111, 1191, 1216
BspACI CCGC 1 cut(s) 770
BspANI GGCC 2 cut(s) 180, 1121
BspCNI CTCAG 2 cut(s) 519, 877
BspDI ATCGAT 1 cut(s) 1215
BspFNI CGCG 2 cut(s) 1153, 1155
BspHI TCATGA 1 cut(s) 105
BspLI GGNNCC 2 cut(s) 604, 924
BspPI GGATC 1 cut(s) 1211
BspTNI GGTCTC 2 cut(s) 165, 419
BsrDI GCAATG 1 cut(s) 1269
BsrI ACTGG 1 cut(s) 247
BssECI CCNNGG 2 cut(s) 175, 519
BssMI GATC 4 cut(s) 375, 1111, 1191, 1216
BssNAI GTATAC 1 cut(s) 26
BssNI GRCGYC 1 cut(s) 98
BssT1I CCWWGG 1 cut(s) 519
Bst1107I GTATAC 1 cut(s) 26
Bst2UI CCWGG 1 cut(s) 176
Bst4CI ACNGT 3 cut(s) 30, 803, 900
Bst6I CTCTTC 1 cut(s) 1264
BstACI GRCGYC 1 cut(s) 98
BstAPI GCANNNNNTGC 1 cut(s) 437
BstC8I GCNNGC 2 cut(s) 844, 1151
BstDEI CTNAG 4 cut(s) 198, 506, 658, 864
BstF5I GGATG 3 cut(s) 13, 973, 1264
BstFNI CGCG 2 cut(s) 1153, 1155
BstHHI GCGC 2 cut(s) 567, 1155
BstKTI GATC 4 cut(s) 378, 1114, 1194, 1219
BstMAI GTCTC 4 cut(s) 105, 165, 419, 537
BstMBI GATC 4 cut(s) 375, 1111, 1191, 1216
BstMWI GCNNNNNNNGC 3 cut(s) 437, 1152, 1309
BstNI CCWGG 1 cut(s) 176
BstSCI CCNGG 3 cut(s) 174, 382, 1223
BstSFI CTRYAG 1 cut(s) 904
BstUI CGCG 2 cut(s) 1153, 1155
BstV1I GCAGC 3 cut(s) 1078, 1158, 1312
BstX2I RGATCY 1 cut(s) 1111
BstYI RGATCY 1 cut(s) 1111
BstZ17I GTATAC 1 cut(s) 26
Bsu15I ATCGAT 1 cut(s) 1215
BsuI GTATCC 1 cut(s) 796
BsuRI GGCC 2 cut(s) 180, 1121
BsuTUI ATCGAT 1 cut(s) 1215
BtsCI GGATG 3 cut(s) 13, 973, 1264
BtsIMutI CAGTG 1 cut(s) 314
Cac8I GCNNGC 2 cut(s) 844, 1151
CaiI CAGNNNCTG 1 cut(s) 437
CciI TCATGA 1 cut(s) 105
CfoI GCGC 2 cut(s) 567, 1155
Cfr13I GGNCC 3 cut(s) 178, 464, 635
ClaI ATCGAT 1 cut(s) 1215
CseI GACGC 2 cut(s) 87, 743
Csp6I GTAC 3 cut(s) 556, 901, 1174
CviAII CATG 4 cut(s) 106, 237, 928, 1106
CviQI GTAC 3 cut(s) 556, 901, 1174
DdeI CTNAG 4 cut(s) 198, 506, 658, 864
DpnI GATC 4 cut(s) 377, 1113, 1193, 1218
DpnII GATC 4 cut(s) 375, 1111, 1191, 1216
DraIII CACNNNGTG 1 cut(s) 661
Eam1104I CTCTTC 1 cut(s) 1264
EarI CTCTTC 1 cut(s) 1264
Eco130I CCWWGG 1 cut(s) 519
Eco24I GRGCYC 2 cut(s) 235, 1291
Eco31I GGTCTC 2 cut(s) 165, 419
Eco32I GATATC 1 cut(s) 389
Eco47I GGWCC 2 cut(s) 464, 635
Eco57I CTGAAG 2 cut(s) 65, 176
Eco88I CYCGRG 1 cut(s) 551
EcoO109I RGGNCCY 1 cut(s) 178
EcoRII CCWGG 1 cut(s) 174
EcoRV GATATC 1 cut(s) 389
EcoT14I CCWWGG 1 cut(s) 519
EcoT22I ATGCAT 1 cut(s) 242
EcoT38I GRGCYC 2 cut(s) 235, 1291
ErhI CCWWGG 1 cut(s) 519
Esp3I CGTCTC 2 cut(s) 105, 537
FaeI CATG 4 cut(s) 109, 240, 931, 1109
FatI CATG 4 cut(s) 105, 236, 927, 1105
FblI GTMKAC 1 cut(s) 25
Fnu4HI GCNGC 4 cut(s) 770, 1092, 1147, 1301
FokI GGATG 3 cut(s) 20, 980, 1271
FriOI GRGCYC 2 cut(s) 235, 1291
Fsp4HI GCNGC 4 cut(s) 770, 1092, 1147, 1301
FspBI CTAG 2 cut(s) 75, 269
FspI TGCGCA 1 cut(s) 566
GlaI GCGC 2 cut(s) 566, 1154
GluI GCNGC 4 cut(s) 770, 1092, 1147, 1301
GsaI CCCAGC 1 cut(s) 403
GsuI CTGGAG 3 cut(s) 359, 561, 890
HaeIII GGCC 2 cut(s) 180, 1121
HapII CCGG 4 cut(s) 5, 383, 575, 1225
HgaI GACGC 2 cut(s) 87, 743
HhaI GCGC 2 cut(s) 567, 1155
Hin1I GRCGYC 1 cut(s) 98
Hin1II CATG 4 cut(s) 109, 240, 931, 1109
Hin6I GCGC 2 cut(s) 565, 1153
HinP1I GCGC 2 cut(s) 565, 1153
HincII GTYRAC 2 cut(s) 208, 532
HindII GTYRAC 2 cut(s) 208, 532
HindIII AAGCTT 1 cut(s) 944
HinfI GANTC 3 cut(s) 109, 434, 874
HpaII CCGG 4 cut(s) 5, 383, 575, 1225
Hpy166II GTNNAC 3 cut(s) 26, 208, 532
Hpy188I TCNGA 2 cut(s) 156, 879
Hpy188III TCNNGA 9 cut(s) 106, 187, 269, 458, 540, 551, 581, 758, 1000
Hpy8I GTNNAC 3 cut(s) 26, 208, 532
Hpy99I CGWCG 1 cut(s) 686
HpyAV CCTTC 6 cut(s) 40, 142, 419, 1006, 1249, 1323
HpyCH4III ACNGT 3 cut(s) 30, 803, 900
HpyCH4IV ACGT 2 cut(s) 546, 681
HpyF10VI GCNNNNNNNGC 3 cut(s) 437, 1152, 1309
HpyF3I CTNAG 4 cut(s) 198, 506, 658, 864
HpySE526I ACGT 2 cut(s) 546, 681
Hsp92I GRCGYC 1 cut(s) 98
Hsp92II CATG 4 cut(s) 109, 240, 931, 1109
HspAI GCGC 2 cut(s) 565, 1153
Kzo9I GATC 4 cut(s) 375, 1111, 1191, 1216
LmnI GCTCC 2 cut(s) 340, 1106
Lsp1109I GCAGC 3 cut(s) 1078, 1158, 1312
LweI GCATC 4 cut(s) 75, 694, 781, 1249
MaeI CTAG 2 cut(s) 75, 269
MaeII ACGT 2 cut(s) 546, 681
MaeIII GTNAC 2 cut(s) 501, 930
MalI GATC 4 cut(s) 377, 1113, 1193, 1218
MboI GATC 4 cut(s) 375, 1111, 1191, 1216
MboII GAAGA 3 cut(s) 1169, 1281, 1286
MfeI CAATTG 2 cut(s) 642, 986
MflI RGATCY 1 cut(s) 1111
MhlI GDGCHC 4 cut(s) 143, 235, 801, 1291
MluCI AATT 8 cut(s) 12, 346, 642, 986, 1127, 1164, 1206, 1228
MlyI GAGTC 2 cut(s) 103, 443
MnlI CCTC 7 cut(s) 72, 183, 616, 733, 775, 862, 967
Mph1103I ATGCAT 1 cut(s) 242
MseI TTAA 3 cut(s) 821, 963, 1077
MspA1I CMGCKG 1 cut(s) 868
MspI CCGG 4 cut(s) 5, 383, 575, 1225
MspR9I CCNGG 3 cut(s) 176, 384, 1225
MunI CAATTG 2 cut(s) 642, 986
MvaI CCWGG 1 cut(s) 176
MvnI CGCG 2 cut(s) 1153, 1155
MwoI GCNNNNNNNGC 3 cut(s) 437, 1152, 1309
NciI CCSGG 2 cut(s) 384, 1225
NdeII GATC 4 cut(s) 375, 1111, 1191, 1216
NlaIII CATG 4 cut(s) 109, 240, 931, 1109
NlaIV GGNNCC 2 cut(s) 604, 924
NmuCI GTSAC 1 cut(s) 501
NsbI TGCGCA 1 cut(s) 566
NsiI ATGCAT 1 cut(s) 242
PaeR7I CTCGAG 1 cut(s) 551
PagI TCATGA 1 cut(s) 105
PfeI GAWTC 1 cut(s) 874
PkrI GCNGC 4 cut(s) 771, 1093, 1148, 1302
PleI GAGTC 2 cut(s) 103, 442
PpsI GAGTC 2 cut(s) 103, 442
Psp6I CCWGG 1 cut(s) 174
PspFI CCCAGC 1 cut(s) 399
PspGI CCWGG 1 cut(s) 174
PspN4I GGNNCC 2 cut(s) 604, 924
PspPI GGNCC 3 cut(s) 178, 464, 635
PstNI CAGNNNCTG 1 cut(s) 437
PsuI RGATCY 1 cut(s) 1111
PvuII CAGCTG 1 cut(s) 868
RsaI GTAC 3 cut(s) 557, 902, 1175
RsaNI GTAC 3 cut(s) 556, 901, 1174
SaqAI TTAA 3 cut(s) 821, 963, 1077
SatI GCNGC 4 cut(s) 770, 1092, 1147, 1301
Sau3AI GATC 4 cut(s) 375, 1111, 1191, 1216
Sau96I GGNCC 3 cut(s) 178, 464, 635
ScaI AGTACT 2 cut(s) 557, 1175
SchI GAGTC 2 cut(s) 103, 443
ScrFI CCNGG 3 cut(s) 176, 384, 1225
SduI GDGCHC 4 cut(s) 143, 235, 801, 1291
SfaNI GCATC 4 cut(s) 75, 694, 781, 1249
SfcI CTRYAG 1 cut(s) 904
Sfr274I CTCGAG 1 cut(s) 551
SinI GGWCC 2 cut(s) 464, 635
SlaI CTCGAG 1 cut(s) 551
SmlI CTYRAG 4 cut(s) 551, 758, 941, 1115
SmoI CTYRAG 4 cut(s) 551, 758, 941, 1115
Sse9I AATT 8 cut(s) 12, 346, 642, 986, 1127, 1164, 1206, 1228
SsiI CCGC 1 cut(s) 770
SspI AATATT 1 cut(s) 809
SspMI CTAG 2 cut(s) 75, 269
StyD4I CCNGG 3 cut(s) 174, 382, 1223
StyI CCWWGG 1 cut(s) 519
TaaI ACNGT 3 cut(s) 30, 803, 900
TaiI ACGT 2 cut(s) 549, 684
TaqI TCGA 4 cut(s) 284, 552, 1060, 1215
TaqII GACCGA 1 cut(s) 623
TasI AATT 8 cut(s) 12, 346, 642, 986, 1127, 1164, 1206, 1228
TatI WGTACW 3 cut(s) 555, 900, 1173
TauI GCSGC 1 cut(s) 772
TfiI GAWTC 1 cut(s) 874
Tru1I TTAA 3 cut(s) 821, 963, 1077
Tru9I TTAA 3 cut(s) 821, 963, 1077
TscAI CASTG 1 cut(s) 321
TseFI GTSAC 1 cut(s) 501
TseI GCWGC 3 cut(s) 1091, 1146, 1300
Tsp45I GTSAC 1 cut(s) 501
TspDTI ATGAA 3 cut(s) 24, 899, 1176
TspGWI ACGGA 1 cut(s) 242
TspRI CASTG 1 cut(s) 321
VpaK11BI GGWCC 2 cut(s) 464, 635
XapI RAATTY 1 cut(s) 346
XbaI TCTAGA 1 cut(s) 268
XhoI CTCGAG 1 cut(s) 551
XmiI GTMKAC 1 cut(s) 25
XspI CTAG 2 cut(s) 75, 269
ZrmI AGTACT 2 cut(s) 557, 1175
Zsp2I ATGCAT 1 cut(s) 242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.