Prupe.8G159200_v2.0.a1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000095
Physical Location & Seq
Reverse (-)
16846156 .. 16850002
3847 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G159200.1

Sequence Viewer

Length: 1626 bp
ATGGTGAAGTATGAACGCAACTTGGGAAAGCGACACAGGCGTAGTGAAGGAAAGTACTTGGGAAAGAATGAAAGGGAAAAGGGAGTATGCAACTCGGTAAAGTACAATCGCAACTTGGGAAAGCAATGCAAACGTAGTGAAGGAAAGAACTTGGAGAAGAATGAGGGGGAAAAGGGTGTATACAACTTGGGGAAGTTTGAGTGCAACTTGGGAAATCAACGCAGATGTTGTGAAGGAAACAATGAGGGAAAAAAAGGTGTGTACAACTTGTTGGACAGAATTAGTGCATTGCCAGATGAAATTCTTGTCAGTATATTGGCTCTCTTGCCGCTAAAGGAAGCCGCAGCTACTAGTATACTTTCTAGACGTTGGCAGTATGTGTGGATGTCCACTATGGTTCTCAACTTTGATGCTAACTTTGATGTTGGTAGCAATATCTGCCACTTTGGAGCCCTCAAACGAAAATTAAGAGACCTGGAAAGTGGTAGATATGTCAATTGGGTGAATCGTGTGGTGGAACAACATAGAGGCCCAAACATCGAGGAATTCAGGGCTTGCTTTCAACTAAATGATCGGTTTACAAATGGATTCAGTTTGCAATTGAAAAGGGAGTTACAACATTCGACAGTGCTTCATAAATTTCTATGCTTGTATTCTTACATTCCAAGTCTACGCCCCTGTGGATACAAAGTTGGATTTCAGTTCCTCAAAGTTCTTCATTTCCAATGGGTTGATGTGACTGATGAAGTTCTTGAATACTTCTTTTCCAACTGTGCAGTTCTTGAACGAGTAACCGTGTACGGAACAAAAAGTCTAGTTAATTTAAGAGTTGTTCGTCCATCGGCTGCATTGAAGCATTTAGCTATAGGAGCTTGTCTTGGCCTTCAAGGCATAGAGATTTGTGAGGCAAACCTTGTTTCATTTAAATATAATGGAAATGTGATAAACCTGCTTCTCACTAATGTACCATTGCTTGTAGAGGTGTCCATTTCCTATATTTCCAACCCCCATGCATTCATAGAGCTTTTCTCTAGCAAACTTTCATGCTGTCTTTCGCAACTGGAGATTCTCATGCTGAAAATCACTAGAGCGGTTAGTATATGTAATTATGGTGTGTTGGTTTTCTTTTCTTCTTTTATGGATTATGTAGCTCATTGTTCCTTGTTTGGTTTTCAGGATTATAATCCGAAACATGTGTTTCCTATGCTGGCAAATCTCAAGCATTTGGAATTAATAGTTCATGCGGATTACCGTCTGGCTCTTCATCATTTAACTTCTCTTCTAAAAGCATCTCCTTTCTTGCAAAGACTTGTGTTGAAGTTGGATTTCATTGTATCCCTGGAGGGCATAGAAAAAATAAAGAAGGCTGCGAAATGCCCCCATCATTACCTCAAGGTAGTAGAAATAGTCGGGTATCGTGTGCGTGCATTTGCTGTTGATCATATCTTGTTCTTAATAAAGAGTGCTACTGCATTAGAGAAAATTGTTATTGATCCTCTCCGACGTTGGGCGTATCCCTATGAACCGGGTAGTGAAGAACTCGCTGATGAGGCAGAGGCAAGAGAGCACGCTGTGCAACTCATCAAAACAAAATTGCCTTCAACTGTTGAATTTGTACGTCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

542

Amino Acids

61.89

Weight (kDa)

9.17

Isoelectric Point (pI)

36.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1182
Acc36I ACCTGC 1 cut(s) 957
AccBSI CCGCTC 1 cut(s) 1091
AccI GTMKAC 3 cut(s) 180, 355, 670
AciI CCGC 4 cut(s) 329, 342, 1091, 1244
AclWI GGATC 1 cut(s) 1487
AcsI RAATTY 4 cut(s) 300, 545, 638, 1610
AdeI CACNNNGTG 1 cut(s) 1573
AfaI GTAC 6 cut(s) 56, 104, 263, 800, 966, 1617
AfiI CCNNNNNNNGG 1 cut(s) 1507
AflIII ACRYGT 1 cut(s) 1192
AgsI TTSAA 9 cut(s) 563, 604, 755, 785, 853, 887, 1318, 1602, 1610
AhlI ACTAGT 1 cut(s) 350
AjnI CCWGG 2 cut(s) 474, 1338
AluBI AGCT 5 cut(s) 347, 863, 872, 1024, 1151
AluI AGCT 5 cut(s) 347, 863, 872, 1024, 1151
Alw21I GWGCWC 1 cut(s) 1569
Alw26I GTCTC 1 cut(s) 465
AlwI GGATC 1 cut(s) 1487
AoxI GGCC 2 cut(s) 529, 880
ApeKI GCWGC 3 cut(s) 344, 845, 1367
ApoI RAATTY 4 cut(s) 300, 545, 638, 1610
AseI ATTAAT 1 cut(s) 1232
AspS9I GGNCC 1 cut(s) 530
AsuC2I CCSGG 1 cut(s) 1527
AsuHPI GGTGA 2 cut(s) 16, 514
BaeI ACNNNNGTAYC 2 cut(s) 948, 981
BanII GRGCYC 1 cut(s) 454
Bbv12I GWGCWC 1 cut(s) 1569
BbvI GCAGC 3 cut(s) 356, 832, 1354
BccI CCATC 2 cut(s) 847, 1389
BciT130I CCWGG 2 cut(s) 476, 1340
BciVI GTATCC 3 cut(s) 677, 1345, 1524
BclI TGATCA 1 cut(s) 1438
BcnI CCSGG 1 cut(s) 1527
BcoDI GTCTC 1 cut(s) 465
BcuI ACTAGT 1 cut(s) 350
BfaI CTAG 5 cut(s) 351, 363, 815, 1032, 1086
BfmI CTRYAG 2 cut(s) 864, 1622
BfuAI ACCTGC 1 cut(s) 957
BfuI GTATCC 3 cut(s) 677, 1345, 1524
BglI GCCNNNNNGGC 1 cut(s) 888
BisI GCNGC 5 cut(s) 329, 342, 345, 846, 1368
BlsI GCNGC 5 cut(s) 330, 343, 346, 847, 1369
BmcAI AGTACT 1 cut(s) 56
Bme1390I CCNGG 3 cut(s) 476, 1340, 1527
BmgT120I GGNCC 1 cut(s) 530
BmiI GGNNCC 1 cut(s) 451
BmrFI CCNGG 3 cut(s) 476, 1340, 1527
BmsI GCATC 2 cut(s) 400, 1298
BplI GAGNNNNNCTC 2 cut(s) 1013, 1045
BpmI CTGGAG 2 cut(s) 1082, 1361
BpuEI CTTGAG 2 cut(s) 1202, 1376
BpuMI CCSGG 1 cut(s) 1527
BsaBI GATNNNNATC 1 cut(s) 1182
BsaI GGTCTC 1 cut(s) 465
BsaJI CCNNGG 1 cut(s) 1338
Bsc4I CCNNNNNNNGG 1 cut(s) 1507
Bse1I ACTGG 1 cut(s) 1065
Bse3DI GCAATG 3 cut(s) 131, 287, 968
Bse8I GATNNNNATC 1 cut(s) 1182
BseBI CCWGG 2 cut(s) 476, 1340
BseDI CCNNGG 1 cut(s) 1338
BseGI GGATG 1 cut(s) 390
BseJI GATNNNNATC 1 cut(s) 1182
BseLI CCNNNNNNNGG 1 cut(s) 1507
BseMI GCAATG 3 cut(s) 131, 287, 968
BseNI ACTGG 1 cut(s) 1065
BseXI GCAGC 3 cut(s) 356, 832, 1354
BsgI GTGCAG 1 cut(s) 795
BshFI GGCC 2 cut(s) 531, 882
BsiHKAI GWGCWC 1 cut(s) 1569
BsiSI CCGG 1 cut(s) 1526
BslI CCNNNNNNNGG 1 cut(s) 1507
BsmAI GTCTC 1 cut(s) 465
BsmI GAATGC 1 cut(s) 1013
BsnI GGCC 2 cut(s) 531, 882
Bso31I GGTCTC 1 cut(s) 465
Bsp1286I GDGCHC 2 cut(s) 454, 1569
Bsp1407I TGTACA 1 cut(s) 261
Bsp143I GATC 3 cut(s) 571, 1438, 1492
BspACI CCGC 4 cut(s) 329, 342, 1091, 1244
BspANI GGCC 2 cut(s) 531, 882
BspLI GGNNCC 1 cut(s) 451
BspMI ACCTGC 1 cut(s) 957
BspPI GGATC 1 cut(s) 1487
BspQI GCTCTTC 1 cut(s) 1266
BspTNI GGTCTC 1 cut(s) 465
BsrBI CCGCTC 1 cut(s) 1091
BsrDI GCAATG 3 cut(s) 131, 287, 968
BsrGI TGTACA 1 cut(s) 261
BsrI ACTGG 1 cut(s) 1065
BssECI CCNNGG 1 cut(s) 1338
BssMI GATC 3 cut(s) 571, 1438, 1492
BssNAI GTATAC 2 cut(s) 181, 356
Bst1107I GTATAC 2 cut(s) 181, 356
Bst2UI CCWGG 2 cut(s) 476, 1340
Bst4CI ACNGT 5 cut(s) 628, 773, 796, 1253, 1606
Bst6I CTCTTC 2 cut(s) 1266, 1284
BstAPI GCANNNNNTGC 2 cut(s) 438, 1573
BstAUI TGTACA 1 cut(s) 261
BstC8I GCNNGC 4 cut(s) 556, 1209, 1425, 1569
BstF5I GGATG 1 cut(s) 390
BstKTI GATC 3 cut(s) 574, 1441, 1495
BstMAI GTCTC 1 cut(s) 465
BstMBI GATC 3 cut(s) 571, 1438, 1492
BstMWI GCNNNNNNNGC 6 cut(s) 37, 438, 869, 888, 1550, 1573
BstNI CCWGG 2 cut(s) 476, 1340
BstNSI RCATGY 1 cut(s) 1196
BstSCI CCNGG 3 cut(s) 474, 1338, 1525
BstSFI CTRYAG 2 cut(s) 864, 1622
BstV1I GCAGC 3 cut(s) 356, 832, 1354
BstZ17I GTATAC 2 cut(s) 181, 356
BsuI GTATCC 3 cut(s) 677, 1345, 1524
BsuRI GGCC 2 cut(s) 531, 882
BtsCI GGATG 1 cut(s) 390
BtsIMutI CAGTG 1 cut(s) 633
BveI ACCTGC 1 cut(s) 957
Cac8I GCNNGC 4 cut(s) 556, 1209, 1425, 1569
Cfr13I GGNCC 1 cut(s) 530
Csp6I GTAC 6 cut(s) 55, 103, 262, 799, 965, 1616
CviAII CATG 5 cut(s) 1010, 1044, 1072, 1193, 1241
CviQI GTAC 6 cut(s) 55, 103, 262, 799, 965, 1616
DpnI GATC 3 cut(s) 573, 1440, 1494
DpnII GATC 3 cut(s) 571, 1438, 1492
DraI TTTAAA 1 cut(s) 925
DraIII CACNNNGTG 1 cut(s) 1573
Eam1104I CTCTTC 2 cut(s) 1266, 1284
EarI CTCTTC 2 cut(s) 1266, 1284
Eco24I GRGCYC 1 cut(s) 454
Eco31I GGTCTC 1 cut(s) 465
EcoRI GAATTC 1 cut(s) 545
EcoRII CCWGG 2 cut(s) 474, 1338
EcoT22I ATGCAT 1 cut(s) 1015
EcoT38I GRGCYC 1 cut(s) 454
FaeI CATG 5 cut(s) 1013, 1047, 1075, 1196, 1244
FatI CATG 5 cut(s) 1009, 1043, 1071, 1192, 1240
FbaI TGATCA 1 cut(s) 1438
FblI GTMKAC 3 cut(s) 180, 355, 670
Fnu4HI GCNGC 5 cut(s) 329, 342, 345, 846, 1368
FokI GGATG 1 cut(s) 397
FriOI GRGCYC 1 cut(s) 454
Fsp4HI GCNGC 5 cut(s) 329, 342, 345, 846, 1368
FspBI CTAG 5 cut(s) 351, 363, 815, 1032, 1086
GluI GCNGC 5 cut(s) 329, 342, 345, 846, 1368
GsuI CTGGAG 2 cut(s) 1082, 1361
HaeIII GGCC 2 cut(s) 531, 882
HapII CCGG 1 cut(s) 1526
Hin1II CATG 5 cut(s) 1013, 1047, 1075, 1196, 1244
HinfI GANTC 3 cut(s) 505, 588, 1066
HpaII CCGG 1 cut(s) 1526
HphI GGTGA 2 cut(s) 16, 514
Hpy166II GTNNAC 7 cut(s) 181, 262, 356, 390, 579, 671, 799
Hpy188I TCNGA 2 cut(s) 1188, 1502
Hpy188III TCNNGA 4 cut(s) 363, 752, 782, 1175
Hpy8I GTNNAC 7 cut(s) 181, 262, 356, 390, 579, 671, 799
Hpy99I CGWCG 1 cut(s) 1506
HpyAV CCTTC 6 cut(s) 41, 134, 227, 893, 1357, 1608
HpyCH4III ACNGT 5 cut(s) 628, 773, 796, 1253, 1606
HpyCH4IV ACGT 4 cut(s) 133, 367, 1504, 1618
HpyF10VI GCNNNNNNNGC 6 cut(s) 37, 438, 869, 888, 1550, 1573
HpySE526I ACGT 4 cut(s) 133, 367, 1504, 1618
Hsp92II CATG 5 cut(s) 1013, 1047, 1075, 1196, 1244
Ksp22I TGATCA 1 cut(s) 1438
Kzo9I GATC 3 cut(s) 571, 1438, 1492
LguI GCTCTTC 1 cut(s) 1266
LmnI GCTCC 2 cut(s) 449, 869
Lsp1109I GCAGC 3 cut(s) 356, 832, 1354
LweI GCATC 2 cut(s) 400, 1298
MaeI CTAG 5 cut(s) 351, 363, 815, 1032, 1086
MaeII ACGT 4 cut(s) 133, 367, 1504, 1618
MaeIII GTNAC 3 cut(s) 612, 736, 790
MalI GATC 3 cut(s) 573, 1440, 1494
MbiI CCGCTC 1 cut(s) 1091
MboI GATC 3 cut(s) 571, 1438, 1492
MboII GAAGA 6 cut(s) 169, 707, 1122, 1253, 1271, 1547
MfeI CAATTG 2 cut(s) 496, 599
MhlI GDGCHC 2 cut(s) 454, 1569
MmeI TCCRAC 6 cut(s) 252, 673, 792, 1026, 1302, 1525
Mph1103I ATGCAT 1 cut(s) 1015
MseI TTAA 7 cut(s) 467, 819, 824, 924, 1232, 1271, 1454
MspI CCGG 1 cut(s) 1526
MspR9I CCNGG 3 cut(s) 476, 1340, 1527
MunI CAATTG 2 cut(s) 496, 599
Mva1269I GAATGC 1 cut(s) 1013
MvaI CCWGG 2 cut(s) 476, 1340
MwoI GCNNNNNNNGC 6 cut(s) 37, 438, 869, 888, 1550, 1573
NciI CCSGG 1 cut(s) 1527
NdeII GATC 3 cut(s) 571, 1438, 1492
NlaIII CATG 5 cut(s) 1013, 1047, 1075, 1196, 1244
NlaIV GGNNCC 1 cut(s) 451
NmuCI GTSAC 1 cut(s) 736
NsiI ATGCAT 1 cut(s) 1015
NspI RCATGY 1 cut(s) 1196
PciI ACATGT 1 cut(s) 1192
PciSI GCTCTTC 1 cut(s) 1266
PctI GAATGC 1 cut(s) 1013
PfeI GAWTC 3 cut(s) 505, 588, 1066
PkrI GCNGC 5 cut(s) 330, 343, 346, 847, 1369
PscI ACATGT 1 cut(s) 1192
PshBI ATTAAT 1 cut(s) 1232
PsiI TTATAA 1 cut(s) 1182
Psp6I CCWGG 2 cut(s) 474, 1338
PspGI CCWGG 2 cut(s) 474, 1338
PspN4I GGNNCC 1 cut(s) 451
PspPI GGNCC 1 cut(s) 530
RsaI GTAC 6 cut(s) 56, 104, 263, 800, 966, 1617
RsaNI GTAC 6 cut(s) 55, 103, 262, 799, 965, 1616
SapI GCTCTTC 1 cut(s) 1266
SaqAI TTAA 7 cut(s) 467, 819, 824, 924, 1232, 1271, 1454
SatI GCNGC 5 cut(s) 329, 342, 345, 846, 1368
Sau3AI GATC 3 cut(s) 571, 1438, 1492
Sau96I GGNCC 1 cut(s) 530
ScaI AGTACT 1 cut(s) 56
ScrFI CCNGG 3 cut(s) 476, 1340, 1527
SduI GDGCHC 2 cut(s) 454, 1569
SfaNI GCATC 2 cut(s) 400, 1298
SfcI CTRYAG 2 cut(s) 864, 1622
SmiI ATTTAAAT 1 cut(s) 925
SmlI CTYRAG 2 cut(s) 1217, 1391
SmoI CTYRAG 2 cut(s) 1217, 1391
SpeI ACTAGT 1 cut(s) 350
SsiI CCGC 4 cut(s) 329, 342, 1091, 1244
SspMI CTAG 5 cut(s) 351, 363, 815, 1032, 1086
StyD4I CCNGG 3 cut(s) 474, 1338, 1525
SwaI ATTTAAAT 1 cut(s) 925
TaaI ACNGT 5 cut(s) 628, 773, 796, 1253, 1606
TaiI ACGT 4 cut(s) 136, 370, 1507, 1621
TaqI TCGA 2 cut(s) 540, 623
TatI WGTACW 3 cut(s) 54, 102, 261
TauI GCSGC 2 cut(s) 331, 344
TfiI GAWTC 3 cut(s) 505, 588, 1066
Tru1I TTAA 7 cut(s) 467, 819, 824, 924, 1232, 1271, 1454
Tru9I TTAA 7 cut(s) 467, 819, 824, 924, 1232, 1271, 1454
TscAI CASTG 1 cut(s) 633
TseFI GTSAC 1 cut(s) 736
TseI GCWGC 3 cut(s) 344, 845, 1367
Tsp45I GTSAC 1 cut(s) 736
TspGWI ACGGA 1 cut(s) 816
TspRI CASTG 1 cut(s) 633
VspI ATTAAT 1 cut(s) 1232
XapI RAATTY 4 cut(s) 300, 545, 638, 1610
XbaI TCTAGA 1 cut(s) 362
XceI RCATGY 1 cut(s) 1196
XmiI GTMKAC 3 cut(s) 180, 355, 670
XspI CTAG 5 cut(s) 351, 363, 815, 1032, 1086
ZrmI AGTACT 1 cut(s) 56
Zsp2I ATGCAT 1 cut(s) 1015
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.