FvH4_6g01970

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000095
Physical Location & Seq
Reverse (-)
1130786 .. 1133141
2356 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g01970.t2

Sequence Viewer

Length: 1554 bp
ATGATGAAGAACAGGGCATGCCGAACCTCTCAATTTCTCCCAACCAAGAAGCATGAGAAAAGAAGCAAGCTGAAGAAAAAGGAAAACTTGGGAAAGAAACAGAGAGATAAGGGTGAGTTCAGCTCAGGGAATCGAAATGGCGGGGTTAGCTATGAGGACAGAATCAGTGATTTGCCGGATGGCATTCTTCTTAGTATCTTGTCTTGCTTACTTTTAAAGGAAGCAGCAACCACTAGTGTCCTTTCAAGGCGGTGGCGGGATCTGTGGGCTTCTGTTATGAGTCTTAACTTTGAAGATGAGAAGAATTCGAGGGATTTCAAGGAAGTGAAGCCAAATATACAACACAGGCAACGCCGTAGTTTTGTCAGTATGGTGGATGCTGCCGTGAAACAGCATACAGGCCTAACAATTGAACGGTTCAGGGCTTGCTTTTTTCTAGATCGTCGCTTTGCACAATCCATTGATGAGTGGATTGAGTTTGCCGTGAAAAAGAGGGTGCAGATACTTGAGCTGGAGTTTTCAACAGCGAATTATAAAGATAACTATACATTTCCCCATGAACTACTAGGTCTTGCTAAAGGGTCTACGCAAAAGGACTTACATTCTGGCATCTCAAGTCTGCACTCATCTGGTTGTTGTCTGGGTTTCAAGTCACTAAAAGTTCTTACTTTGCGACATGTTAATGTGGCCGGAGAAGCTCTTGAGAACTTGTTAATGAACTGTCCAGTTGAAAGATTATCAGTGGTGGCAGCCAAAAATTTGGTCGATCTAAGAGTTGTTAGTCCACCAATCACATGGAAGTATTTGGCAATAGAAAAATGTCTTGACCTCAAAACCATTGAGATCTGTAATGCTGACATTGTTTCATTTACTTACATCGGAGTCGGTATAGACCTGGTTCTGAGTAATGTACCATTGCTTACTGAGGTATCCATCACTGAACTCGAGATTAGGAGCAACGATTTCTACAATTCTATAGCTATATCCGTAGAACTTCCATTCACCCAACTGTCATGCTATCTTTCTCAGCTGAAGTGTCTCACAATGGATATCAGTGAAGTGGTCTACAATCAGGATTATGTGTTCCCTATGTTAGCAAATCTCAAGTGTTTGGAATTAATATGTGAACCACATTATGCGTCTGCTCTTCGTTATTTGACTTCTTTCATGAAGGCATCTCCTTACTTGCAGAGACTTGTGTTGAAGATGAATATCTACACATCATGGTTGGAGGAGATGGGAATAGGAAAGACAGAGATGGAGGAGATTGTGACAACAAAGCAACTGGAGAGTGTTGCCAAATGCCCTCACGATGAGCTCAAAGTAATAGAAATAGTTGGGTATCGTGCTCGTAGATTTGCTGCTAAACATGTCATGCTCTTGTTAAAGAATGCCGTTGCACTGAAGAAACTTGTTATTGATCCAGTCCGGCATCGGTCTAGAGGGCTGAGTATGGTGAAGGAAATTATTGATGAGGAAATGAAGGCAAGAAATCATGCTGTGAAACACCTTAAGAAATATGTTCCCTCAACTGTAAACTTTGTATGCCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

518

Amino Acids

59.04

Weight (kDa)

9.13

Isoelectric Point (pI)

47.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 55 - 93 8.8e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 130 - 339 1.2e-21 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 154 - 365 7e-10 FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1 PF23622 309 - 480 3.9e-10 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 534
AccI GTMKAC 2 cut(s) 584, 1065
AciI CCGC 3 cut(s) 141, 250, 256
AclWI GGATC 2 cut(s) 267, 1415
AcoI YGGCCR 1 cut(s) 687
AcsI RAATTY 2 cut(s) 304, 757
AcuI CTGAAG 3 cut(s) 92, 1052, 1424
AfaI GTAC 1 cut(s) 912
AflII CTTAAG 1 cut(s) 1511
AflIII ACRYGT 2 cut(s) 676, 1369
AgsI TTSAA 8 cut(s) 246, 293, 319, 413, 522, 649, 731, 1204
AhlI ACTAGT 1 cut(s) 233
AjnI CCWGG 1 cut(s) 894
AloI GAACNNNNNNTCC 2 cut(s) 1067, 1099
AluBI AGCT 8 cut(s) 70, 123, 150, 511, 698, 980, 1030, 1318
AluI AGCT 8 cut(s) 70, 123, 150, 511, 698, 980, 1030, 1318
Alw21I GWGCWC 2 cut(s) 1320, 1351
Alw26I GTCTC 2 cut(s) 1043, 1186
AlwI GGATC 2 cut(s) 267, 1415
Ama87I CYCGRG 1 cut(s) 944
AoxI GGCC 2 cut(s) 400, 687
ApeKI GCWGC 4 cut(s) 224, 380, 749, 1361
ApoI RAATTY 2 cut(s) 304, 757
ArsI GACNNNNNNTTYG 2 cut(s) 747, 779
AseI ATTAAT 1 cut(s) 1118
AsuHPI GGTGA 3 cut(s) 125, 994, 1468
AvaI CYCGRG 1 cut(s) 944
BaeI ACNNNNGTAYC 2 cut(s) 912, 945
BanII GRGCYC 1 cut(s) 1320
Bbv12I GWGCWC 2 cut(s) 1320, 1351
BbvI GCAGC 4 cut(s) 236, 367, 761, 1348
BccI CCATC 4 cut(s) 173, 941, 1231, 1252
BceAI ACGGC 4 cut(s) 339, 368, 467, 1379
BciT130I CCWGG 1 cut(s) 896
BciVI GTATCC 1 cut(s) 940
BcoDI GTCTC 2 cut(s) 1043, 1186
BcuI ACTAGT 1 cut(s) 233
BfaI CTAG 4 cut(s) 234, 437, 566, 1440
BfmI CTRYAG 1 cut(s) 975
BfrI CTTAAG 1 cut(s) 1511
BfuI GTATCC 1 cut(s) 940
BglII AGATCT 1 cut(s) 843
BisI GCNGC 4 cut(s) 225, 381, 750, 1362
BlsI GCNGC 4 cut(s) 226, 382, 751, 1363
Bme1390I CCNGG 1 cut(s) 896
BmeT110I CYCGRG 1 cut(s) 944
BmrFI CCNGG 1 cut(s) 896
BmsI GCATC 4 cut(s) 367, 618, 1184, 1441
BplI GAGNNNNNCTC 2 cut(s) 107, 139
BpmI CTGGAG 2 cut(s) 533, 1307
Bpu10I CCTNAGC 1 cut(s) 124
BpuEI CTTGAG 4 cut(s) 527, 598, 722, 1088
BsaBI GATNNNNATC 1 cut(s) 1211
Bse1I ACTGG 3 cut(s) 725, 1290, 1424
Bse3DI GCAATG 1 cut(s) 914
Bse8I GATNNNNATC 1 cut(s) 1211
BseBI CCWGG 1 cut(s) 896
BseGI GGATG 2 cut(s) 184, 382
BseJI GATNNNNATC 1 cut(s) 1211
BseMI GCAATG 1 cut(s) 914
BseMII CTCAG 5 cut(s) 138, 893, 915, 1040, 1439
BseNI ACTGG 3 cut(s) 725, 1290, 1424
BseRI GAGGAG 2 cut(s) 1247, 1277
BseXI GCAGC 4 cut(s) 236, 367, 761, 1348
BsgI GTGCAG 2 cut(s) 518, 605
BshFI GGCC 2 cut(s) 402, 689
BsiHKAI GWGCWC 2 cut(s) 1320, 1351
BsiHKCI CYCGRG 1 cut(s) 944
BsiSI CCGG 3 cut(s) 176, 690, 1429
BsmAI GTCTC 2 cut(s) 1043, 1186
BsmI GAATGC 2 cut(s) 183, 1396
BsnI GGCC 2 cut(s) 402, 689
BsoBI CYCGRG 1 cut(s) 944
Bsp1286I GDGCHC 2 cut(s) 1320, 1351
Bsp143I GATC 5 cut(s) 259, 439, 766, 843, 1420
BspACI CCGC 3 cut(s) 141, 250, 256
BspANI GGCC 2 cut(s) 402, 689
BspCNI CTCAG 5 cut(s) 137, 894, 916, 1039, 1440
BspHI TCATGA 1 cut(s) 1167
BspPI GGATC 2 cut(s) 267, 1415
BspQI GCTCTTC 1 cut(s) 1152
BspTI CTTAAG 1 cut(s) 1511
BsrDI GCAATG 1 cut(s) 914
BsrI ACTGG 3 cut(s) 725, 1290, 1424
BssMI GATC 5 cut(s) 259, 439, 766, 843, 1420
Bst2UI CCWGG 1 cut(s) 896
Bst4CI ACNGT 4 cut(s) 417, 722, 1011, 1534
Bst6I CTCTTC 1 cut(s) 1152
BstAFI CTTAAG 1 cut(s) 1511
BstC8I GCNNGC 3 cut(s) 19, 68, 427
BstDEI CTNAG 7 cut(s) 124, 191, 770, 902, 924, 1026, 1448
BstF5I GGATG 2 cut(s) 184, 382
BstKTI GATC 5 cut(s) 262, 442, 769, 846, 1423
BstMAI GTCTC 2 cut(s) 1043, 1186
BstMBI GATC 5 cut(s) 259, 439, 766, 843, 1420
BstMWI GCNNNNNNNGC 2 cut(s) 147, 695
BstNI CCWGG 1 cut(s) 896
BstNSI RCATGY 3 cut(s) 21, 680, 1373
BstSCI CCNGG 1 cut(s) 894
BstSFI CTRYAG 1 cut(s) 975
BstV1I GCAGC 4 cut(s) 236, 367, 761, 1348
BstX2I RGATCY 2 cut(s) 259, 843
BstXI CCANNNNNNTGG 2 cut(s) 760, 795
BstYI RGATCY 2 cut(s) 259, 843
BsuI GTATCC 1 cut(s) 940
BsuRI GGCC 2 cut(s) 402, 689
BtsCI GGATG 2 cut(s) 184, 382
BtsIMutI CAGTG 5 cut(s) 172, 747, 936, 1060, 1400
Cac8I GCNNGC 3 cut(s) 19, 68, 427
CciI TCATGA 1 cut(s) 1167
CseI GACGC 1 cut(s) 1128
CsiI ACCWGGT 1 cut(s) 894
Csp6I GTAC 1 cut(s) 911
CviQI GTAC 1 cut(s) 911
DdeI CTNAG 7 cut(s) 124, 191, 770, 902, 924, 1026, 1448
DpnI GATC 5 cut(s) 261, 441, 768, 845, 1422
DpnII GATC 5 cut(s) 259, 439, 766, 843, 1420
DraI TTTAAA 1 cut(s) 216
EaeI YGGCCR 1 cut(s) 687
Eam1104I CTCTTC 1 cut(s) 1152
EarI CTCTTC 1 cut(s) 1152
Ecl136II GAGCTC 1 cut(s) 1318
Eco147I AGGCCT 1 cut(s) 402
Eco24I GRGCYC 1 cut(s) 1320
Eco32I GATATC 1 cut(s) 1051
Eco53kI GAGCTC 1 cut(s) 1318
Eco57I CTGAAG 3 cut(s) 92, 1052, 1424
Eco88I CYCGRG 1 cut(s) 944
EcoICRI GAGCTC 1 cut(s) 1318
EcoRI GAATTC 1 cut(s) 304
EcoRII CCWGG 1 cut(s) 894
EcoRV GATATC 1 cut(s) 1051
EcoT38I GRGCYC 1 cut(s) 1320
FalI AAGNNNNNCTT 2 cut(s) 71, 103
FauI CCCGC 2 cut(s) 134, 249
FblI GTMKAC 2 cut(s) 584, 1065
Fnu4HI GCNGC 4 cut(s) 225, 381, 750, 1362
FokI GGATG 2 cut(s) 191, 389
FriOI GRGCYC 1 cut(s) 1320
Fsp4HI GCNGC 4 cut(s) 225, 381, 750, 1362
FspBI CTAG 4 cut(s) 234, 437, 566, 1440
GluI GCNGC 4 cut(s) 225, 381, 750, 1362
GsuI CTGGAG 2 cut(s) 533, 1307
HaeIII GGCC 2 cut(s) 402, 689
HapII CCGG 3 cut(s) 176, 690, 1429
HgaI GACGC 1 cut(s) 1128
HinfI GANTC 4 cut(s) 130, 162, 280, 882
HpaII CCGG 3 cut(s) 176, 690, 1429
HphI GGTGA 3 cut(s) 125, 994, 1468
Hpy166II GTNNAC 5 cut(s) 585, 785, 1066, 1127, 1537
Hpy188I TCNGA 2 cut(s) 881, 903
Hpy188III TCNNGA 8 cut(s) 437, 701, 824, 946, 1073, 1168, 1310, 1440
Hpy8I GTNNAC 5 cut(s) 585, 785, 1066, 1127, 1537
Hpy99I CGWCG 1 cut(s) 447
HpyAV CCTTC 3 cut(s) 1165, 1453, 1477
HpyCH4III ACNGT 4 cut(s) 417, 722, 1011, 1534
HpyCH4V TGCA 5 cut(s) 452, 499, 622, 1189, 1400
HpyF10VI GCNNNNNNNGC 2 cut(s) 147, 695
HpyF3I CTNAG 7 cut(s) 124, 191, 770, 902, 924, 1026, 1448
Kzo9I GATC 5 cut(s) 259, 439, 766, 843, 1420
LguI GCTCTTC 1 cut(s) 1152
LmnI GCTCC 1 cut(s) 954
Lsp1109I GCAGC 4 cut(s) 236, 367, 761, 1348
LweI GCATC 4 cut(s) 367, 618, 1184, 1441
MabI ACCWGGT 1 cut(s) 894
MaeI CTAG 4 cut(s) 234, 437, 566, 1440
MaeIII GTNAC 2 cut(s) 651, 1270
MalI GATC 5 cut(s) 261, 441, 768, 845, 1422
MboI GATC 5 cut(s) 259, 439, 766, 843, 1420
MboII GAAGA 8 cut(s) 19, 85, 179, 305, 313, 1139, 1216, 1417
MfeI CAATTG 1 cut(s) 408
MflI RGATCY 2 cut(s) 259, 843
MhlI GDGCHC 2 cut(s) 1320, 1351
MluCI AATT 8 cut(s) 32, 304, 408, 529, 757, 970, 1115, 1464
MlyI GAGTC 2 cut(s) 289, 891
MmeI TCCRAC 1 cut(s) 1209
MseI TTAA 7 cut(s) 215, 285, 681, 713, 1118, 1385, 1512
MslI CAYNNNNRTG 1 cut(s) 681
MspA1I CMGCKG 1 cut(s) 1030
MspCI CTTAAG 1 cut(s) 1511
MspI CCGG 3 cut(s) 176, 690, 1429
MspR9I CCNGG 1 cut(s) 896
MunI CAATTG 1 cut(s) 408
Mva1269I GAATGC 2 cut(s) 183, 1396
MvaI CCWGG 1 cut(s) 896
MwoI GCNNNNNNNGC 2 cut(s) 147, 695
NdeII GATC 5 cut(s) 259, 439, 766, 843, 1420
NmuCI GTSAC 2 cut(s) 651, 1270
NspI RCATGY 3 cut(s) 21, 680, 1373
PaeI GCATGC 1 cut(s) 21
PaeR7I CTCGAG 1 cut(s) 944
PagI TCATGA 1 cut(s) 1167
PceI AGGCCT 1 cut(s) 402
PciI ACATGT 2 cut(s) 676, 1369
PciSI GCTCTTC 1 cut(s) 1152
PctI GAATGC 2 cut(s) 183, 1396
PfeI GAWTC 2 cut(s) 130, 162
PkrI GCNGC 4 cut(s) 226, 382, 751, 1363
PleI GAGTC 2 cut(s) 288, 890
PpsI GAGTC 2 cut(s) 288, 890
PscI ACATGT 2 cut(s) 676, 1369
PshBI ATTAAT 1 cut(s) 1118
PsiI TTATAA 1 cut(s) 534
Psp124BI GAGCTC 1 cut(s) 1320
Psp6I CCWGG 1 cut(s) 894
PspGI CCWGG 1 cut(s) 894
PsuI RGATCY 2 cut(s) 259, 843
PvuII CAGCTG 1 cut(s) 1030
RsaI GTAC 1 cut(s) 912
RsaNI GTAC 1 cut(s) 911
RseI CAYNNNNRTG 1 cut(s) 681
SacI GAGCTC 1 cut(s) 1320
SapI GCTCTTC 1 cut(s) 1152
SaqAI TTAA 7 cut(s) 215, 285, 681, 713, 1118, 1385, 1512
SatI GCNGC 4 cut(s) 225, 381, 750, 1362
Sau3AI GATC 5 cut(s) 259, 439, 766, 843, 1420
SchI GAGTC 2 cut(s) 289, 891
ScrFI CCNGG 1 cut(s) 896
SduI GDGCHC 2 cut(s) 1320, 1351
SexAI ACCWGGT 1 cut(s) 894
SfaNI GCATC 4 cut(s) 367, 618, 1184, 1441
SfcI CTRYAG 1 cut(s) 975
Sfr274I CTCGAG 1 cut(s) 944
SlaI CTCGAG 1 cut(s) 944
SmiMI CAYNNNNRTG 1 cut(s) 681
SmlI CTYRAG 6 cut(s) 506, 613, 701, 944, 1103, 1511
SmoI CTYRAG 6 cut(s) 506, 613, 701, 944, 1103, 1511
SpeI ACTAGT 1 cut(s) 233
SphI GCATGC 1 cut(s) 21
Sse9I AATT 8 cut(s) 32, 304, 408, 529, 757, 970, 1115, 1464
SseBI AGGCCT 1 cut(s) 402
SsiI CCGC 3 cut(s) 141, 250, 256
SspMI CTAG 4 cut(s) 234, 437, 566, 1440
SstI GAGCTC 1 cut(s) 1320
StuI AGGCCT 1 cut(s) 402
StyD4I CCNGG 1 cut(s) 894
TaaI ACNGT 4 cut(s) 417, 722, 1011, 1534
TaqI TCGA 4 cut(s) 133, 308, 765, 945
TaqII GACCGA 1 cut(s) 1425
TasI AATT 8 cut(s) 32, 304, 408, 529, 757, 970, 1115, 1464
TfiI GAWTC 2 cut(s) 130, 162
Tru1I TTAA 7 cut(s) 215, 285, 681, 713, 1118, 1385, 1512
Tru9I TTAA 7 cut(s) 215, 285, 681, 713, 1118, 1385, 1512
TscAI CASTG 5 cut(s) 172, 747, 943, 1060, 1407
TseFI GTSAC 2 cut(s) 651, 1270
TseI GCWGC 4 cut(s) 224, 380, 749, 1361
Tsp45I GTSAC 2 cut(s) 651, 1270
TspDTI ATGAA 8 cut(s) 20, 573, 731, 855, 1156, 1184, 1223, 1496
TspGWI ACGGA 1 cut(s) 976
TspRI CASTG 5 cut(s) 172, 747, 943, 1060, 1407
Vha464I CTTAAG 1 cut(s) 1511
VspI ATTAAT 1 cut(s) 1118
XapI RAATTY 2 cut(s) 304, 757
XbaI TCTAGA 2 cut(s) 436, 1439
XceI RCATGY 3 cut(s) 21, 680, 1373
XcmI CCANNNNNNNNNTGG 1 cut(s) 792
XhoI CTCGAG 1 cut(s) 944
XmiI GTMKAC 2 cut(s) 584, 1065
XspI CTAG 4 cut(s) 234, 437, 566, 1440
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.