Rmu_ssc0000337.1_g000013

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000337.1
OG0000095
Physical Location & Seq
Reverse (-)
52976 .. 59342
6367 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000337.1_g000013.1.cds

Sequence Viewer

Length: 2463 bp
atgtgggcatccactaaaaatctcaattttgatgctgatgaaactgtacggcgttattattgggagcacaaccaagaactcagagaccaggaaagctctaaatatgtagattgggtcaatcatgtggtggaacagcatagagagcaggaggacttggaacaatttagggtttgcttccttggtctagataaccgttttactagttcaattgataaatggattcagtttgcaatgaaaaagagagttcaagttctggtgttggattttgtgacgagattatatgatgcaaaacattacacattttcaaactacctagaaacgtcctctgaacactttaactttgaatccctcaaagttcttcatttggaatgcgttaatgtgactggagatgttcttgagtgcatgttgcgaaactgcccttttcttgaaatgggggttcagagtcagtttccttccacagaaggtatccctgactgtcgaacaagtgagcaccatagctatcttcctgaaatggagaaaagagcttgcctaatttctagttctgttcaagaaaaggatgcgtatcagttggtggacagaatcagtgagctgccggatgaaattctggttagaatcttgtctctcttgccactaaaggaagctggagccaccagtaccctttctcggcgttggctttatatgtgggcatccactaaaaatctcaattttgatgctgatgaaactgtacggcgttattattgggagcacaaccaagaactcagagaccaggaaagctctaaatatgtagattgggtcaatcatgtggtggaacagcatagagagcaggaggacttggaacaatttagggtttgcttccttggtctagataaccgttttactagttcaattgataaatggattcagtttgcaatgaaaaagagagttcaagttctggtgttggattttgtgacgagattatatgatgcaaaacattacacattttcaaactacctagaaacgtcctctgaacactttaactttgaatccctcaaagttcttcatttggaatgcgttaatgtgactggagatgttcttgagtgcatgttgcgaaactgcccttttcttgaacaagtatcagtgtattatgccaaaaatttggttgagttaagcgttgtcgatccatccattgcactcaagtatttggagataagatattgtggtgacatcaaaaggattcagattcatgatgcaaaacttgtttcattgtcttatagtggatgtcccatagaattggatctcagtaatgtgcctttgctgattgaggtatccatttgttatgatgggtttaccgatgaatccatgagacttgccttcacccatctttcttgctgcataaatcagctacagactctcatgctggatatccccatgttcgtgcaggtccaccaaaagaatttccctgtactaccaaatctcaagaatttagaagtaagagtctgcgcagatgcttgccggaatactcttcctgtgttaacctctttcatgaaggcatttcctaatttgcagaggcttgttttgaagttggaattctcctttccatttaacccaacagaaggagagaatatgtttaaaggactatgctatggcatttacactgagaaatgtccacatcgtaacatcaaggttgttgaaatactagggtatcgtcatgcttcaactactgttgagcttgtcaactatatagtaaagaatgttgttgcgctagacaaaattgttattgatcctgcccggaattgggcacatcatggtaccagagcgaataagagaattgaagaggtcaagcttgaagaagaggccagagatcatgctatgcactttattagaaaagtagtgccatcaagtgtagaatttgtctgcctgacggtcactcttaagtggatattatctcgtaaacttaaagctgcttacctctactttcagtgcctttactttcagcaggcatattaccggatgaatatgtatggtgttgaaattttctcgcttcaatttcggaggtccccctctacccgcgctgtgttcctctctgaaatcccaaacgcccttctttccttcctttctctctccttttcccttccccaacttcctctctccaactcggaattgcacctctgggtcaatccccaatgctggcctccccacatccttaacctctctgccaactgggttcatcaaagaaatggttttcgccaactgggtcgcactcggcttggtctaaacgagaatgacaacaccgacttgcatgggtcttggggtcttgaactcttctggttcatttcctcgatccaatcccgtcgtcgtcgaatgccgattccgatcgaaatcggcattcgattccttctgcattgcctccgaagccttctacgactacggaacacgtcgtcgttctctgacggcgattgcttcttcttcttcttcttcttttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

820

Amino Acids

96.39

Weight (kDa)

6.35

Isoelectric Point (pI)

48.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1480
Acc36I ACCTGC 1 cut(s) 1408
Acc65I GGTACC 1 cut(s) 1787
AccB1I GGYRCC 1 cut(s) 1787
AccII CGCG 1 cut(s) 2049
AciI CCGC 1 cut(s) 2047
AclWI GGATC 4 cut(s) 1151, 1281, 1754, 2314
AcsI RAATTY 7 cut(s) 600, 1132, 1432, 1459, 1565, 1886, 2010
AfaI GTAC 5 cut(s) 48, 655, 726, 1443, 1789
AfiI CCNNNNNNNGG 5 cut(s) 663, 1592, 1773, 1774, 2166
AflII CTTAAG 1 cut(s) 1910
AflIII ACRYGT 1 cut(s) 2412
AhlI ACTAGT 2 cut(s) 200, 878
AjiI CACGTC 1 cut(s) 2415
AjnI CCWGG 2 cut(s) 87, 765
Alw21I GWGCWC 3 cut(s) 69, 492, 747
Alw26I GTCTC 4 cut(s) 78, 624, 756, 1336
AlwI GGATC 4 cut(s) 1151, 1281, 1754, 2314
AoxI GGCC 2 cut(s) 1833, 2168
ApeKI GCWGC 3 cut(s) 589, 1368, 1940
ApoI RAATTY 7 cut(s) 600, 1132, 1432, 1459, 1565, 1886, 2010
Asp718I GGTACC 1 cut(s) 1787
AspLEI GCGC 3 cut(s) 1481, 1741, 2051
AspS9I GGNCC 2 cut(s) 1420, 2034
AsuC2I CCSGG 1 cut(s) 1768
AsuHPI GGTGA 2 cut(s) 1211, 1345
AvaII GGWCC 2 cut(s) 1420, 2034
BaeGI GKGCMC 1 cut(s) 1780
BaeI ACNNNNGTAYC 2 cut(s) 1664, 1697
BanI GGYRCC 1 cut(s) 1787
Bbv12I GWGCWC 3 cut(s) 69, 492, 747
BbvI GCAGC 3 cut(s) 576, 1355, 1927
BccI CCATC 4 cut(s) 1168, 1313, 1365, 1882
BceAI ACGGC 3 cut(s) 65, 743, 2446
BciT130I CCWGG 2 cut(s) 89, 767
BciVI GTATCC 2 cut(s) 476, 1315
BcnI CCSGG 1 cut(s) 1768
BcoDI GTCTC 4 cut(s) 78, 624, 756, 1336
BcuI ACTAGT 2 cut(s) 200, 878
BfaI CTAG 9 cut(s) 185, 201, 314, 537, 863, 879, 992, 1676, 1742
BfmI CTRYAG 1 cut(s) 1382
BfrI CTTAAG 1 cut(s) 1910
BfuAI ACCTGC 1 cut(s) 1408
BfuI GTATCC 2 cut(s) 476, 1315
BisI GCNGC 3 cut(s) 590, 1369, 1941
BlsI GCNGC 3 cut(s) 591, 1370, 1942
Bme1390I CCNGG 3 cut(s) 89, 767, 1768
Bme18I GGWCC 2 cut(s) 1420, 2034
BmgBI CACGTC 1 cut(s) 2415
BmgT120I GGNCC 2 cut(s) 1420, 2034
BmiI GGNNCC 3 cut(s) 646, 1789, 2036
BmrFI CCNGG 3 cut(s) 89, 767, 1768
BmrI ACTGGG 2 cut(s) 2209, 2240
BmsI GCATC 9 cut(s) 17, 22, 274, 547, 695, 700, 952, 1216, 1474
BmuI ACTGGG 2 cut(s) 2209, 2240
BpmI CTGGAG 3 cut(s) 405, 663, 1083
BpuEI CTTGAG 4 cut(s) 416, 1094, 1157, 1439
BpuMI CCSGG 1 cut(s) 1768
BsaBI GATNNNNATC 3 cut(s) 561, 2351, 2357
BsaI GGTCTC 2 cut(s) 78, 756
BsaJI CCNNGG 2 cut(s) 178, 856
BsaWI WCCGGW 1 cut(s) 1986
Bsc4I CCNNNNNNNGG 5 cut(s) 663, 1592, 1773, 1774, 2166
Bse1I ACTGG 5 cut(s) 388, 651, 1066, 2204, 2235
Bse3DI GCAATG 4 cut(s) 237, 915, 1164, 2380
Bse8I GATNNNNATC 3 cut(s) 561, 2351, 2357
BseBI CCWGG 2 cut(s) 89, 767
BseDI CCNNGG 2 cut(s) 178, 856
BseGI GGATG 8 cut(s) 8, 562, 601, 686, 1160, 1262, 1995, 2178
BseJI GATNNNNATC 3 cut(s) 561, 2351, 2357
BseLI CCNNNNNNNGG 5 cut(s) 663, 1592, 1773, 1774, 2166
BseMI GCAATG 4 cut(s) 237, 915, 1164, 2380
BseMII CTCAG 4 cut(s) 94, 772, 1291, 1626
BseNI ACTGG 5 cut(s) 388, 651, 1066, 2204, 2235
BseSI GKGCMC 1 cut(s) 1780
BseXI GCAGC 3 cut(s) 576, 1355, 1927
BsgI GTGCAG 1 cut(s) 1436
Bsh1236I CGCG 1 cut(s) 2049
Bsh1285I CGRYCG 1 cut(s) 2355
BshFI GGCC 2 cut(s) 1835, 2170
BshNI GGYRCC 1 cut(s) 1787
BsiEI CGRYCG 1 cut(s) 2355
BsiHKAI GWGCWC 3 cut(s) 69, 492, 747
BsiSI CCGG 4 cut(s) 593, 1492, 1768, 1987
BslFI GGGAC 2 cut(s) 1245, 2020
BslI CCNNNNNNNGG 5 cut(s) 663, 1592, 1773, 1774, 2166
BsmAI GTCTC 4 cut(s) 78, 624, 756, 1336
BsmFI GGGAC 2 cut(s) 1245, 2020
BsmI GAATGC 4 cut(s) 374, 1052, 2346, 2364
BsnI GGCC 2 cut(s) 1835, 2170
Bso31I GGTCTC 2 cut(s) 78, 756
Bsp1286I GDGCHC 4 cut(s) 69, 492, 747, 1780
Bsp143I GATC 6 cut(s) 1156, 1273, 1759, 1840, 2319, 2352
BspACI CCGC 1 cut(s) 2047
BspANI GGCC 2 cut(s) 1835, 2170
BspCNI CTCAG 4 cut(s) 93, 771, 1290, 1627
BspFNI CGCG 1 cut(s) 2049
BspHI TCATGA 2 cut(s) 1222, 1521
BspLI GGNNCC 3 cut(s) 646, 1789, 2036
BspMI ACCTGC 1 cut(s) 1408
BspPI GGATC 4 cut(s) 1151, 1281, 1754, 2314
BspT107I GGYRCC 1 cut(s) 1787
BspTI CTTAAG 1 cut(s) 1910
BspTNI GGTCTC 2 cut(s) 78, 756
BsrDI GCAATG 4 cut(s) 237, 915, 1164, 2380
BsrI ACTGG 5 cut(s) 388, 651, 1066, 2204, 2235
BssECI CCNNGG 2 cut(s) 178, 856
BssMI GATC 6 cut(s) 1156, 1273, 1759, 1840, 2319, 2352
BssT1I CCWWGG 2 cut(s) 178, 856
Bst2UI CCWGG 2 cut(s) 89, 767
Bst4CI ACNGT 7 cut(s) 46, 194, 476, 724, 872, 1702, 1903
Bst6I CTCTTC 4 cut(s) 1506, 1806, 1824, 2306
BstAFI CTTAAG 1 cut(s) 1910
BstC8I GCNNGC 4 cut(s) 526, 1489, 1977, 2168
BstDEI CTNAG 4 cut(s) 80, 758, 1277, 1635
BstF5I GGATG 8 cut(s) 8, 562, 601, 686, 1160, 1262, 1995, 2178
BstFNI CGCG 1 cut(s) 2049
BstHHI GCGC 3 cut(s) 1481, 1741, 2051
BstKTI GATC 6 cut(s) 1159, 1276, 1762, 1843, 2322, 2355
BstMAI GTCTC 4 cut(s) 78, 624, 756, 1336
BstMBI GATC 6 cut(s) 1156, 1273, 1759, 1840, 2319, 2352
BstMCI CGRYCG 1 cut(s) 2355
BstMWI GCNNNNNNNGC 3 cut(s) 142, 820, 2391
BstNI CCWGG 2 cut(s) 89, 767
BstNSI RCATGY 2 cut(s) 406, 1084
BstSCI CCNGG 3 cut(s) 87, 765, 1766
BstSFI CTRYAG 1 cut(s) 1382
BstSLI GKGCMC 1 cut(s) 1780
BstUI CGCG 1 cut(s) 2049
BstV1I GCAGC 3 cut(s) 576, 1355, 1927
BstX2I RGATCY 1 cut(s) 1273
BstXI CCANNNNNNTGG 2 cut(s) 1135, 1270
BstYI RGATCY 1 cut(s) 1273
BsuI GTATCC 2 cut(s) 476, 1315
BsuRI GGCC 2 cut(s) 1835, 2170
BtrI CACGTC 1 cut(s) 2415
BtsCI GGATG 8 cut(s) 8, 562, 601, 686, 1160, 1262, 1995, 2178
BtsIMutI CAGTG 4 cut(s) 589, 1122, 1632, 1964
BveI ACCTGC 1 cut(s) 1408
Cac8I GCNNGC 4 cut(s) 526, 1489, 1977, 2168
CciI TCATGA 2 cut(s) 1222, 1521
CfoI GCGC 3 cut(s) 1481, 1741, 2051
Cfr13I GGNCC 2 cut(s) 1420, 2034
Csp6I GTAC 5 cut(s) 47, 654, 725, 1442, 1788
CviQI GTAC 5 cut(s) 47, 654, 725, 1442, 1788
DdeI CTNAG 4 cut(s) 80, 758, 1277, 1635
DpnI GATC 6 cut(s) 1158, 1275, 1761, 1842, 2321, 2354
DpnII GATC 6 cut(s) 1156, 1273, 1759, 1840, 2319, 2352
DraI TTTAAA 1 cut(s) 1609
Eam1104I CTCTTC 4 cut(s) 1506, 1806, 1824, 2306
EarI CTCTTC 4 cut(s) 1506, 1806, 1824, 2306
Eco130I CCWWGG 2 cut(s) 178, 856
Eco31I GGTCTC 2 cut(s) 78, 756
Eco32I GATATC 1 cut(s) 1402
Eco47I GGWCC 2 cut(s) 1420, 2034
EcoO109I RGGNCCY 1 cut(s) 2034
EcoRI GAATTC 1 cut(s) 1565
EcoRII CCWGG 2 cut(s) 87, 765
EcoRV GATATC 1 cut(s) 1402
EcoT14I CCWWGG 2 cut(s) 178, 856
ErhI CCWWGG 2 cut(s) 178, 856
FaqI GGGAC 2 cut(s) 1245, 2020
FauI CCCGC 1 cut(s) 2054
Fnu4HI GCNGC 3 cut(s) 590, 1369, 1941
FokI GGATG 7 cut(s) 569, 608, 673, 1147, 1269, 2002, 2165
Fsp4HI GCNGC 3 cut(s) 590, 1369, 1941
FspBI CTAG 9 cut(s) 185, 201, 314, 537, 863, 879, 992, 1676, 1742
FspI TGCGCA 1 cut(s) 1480
GlaI GCGC 3 cut(s) 1480, 1740, 2050
GluI GCNGC 3 cut(s) 590, 1369, 1941
GsuI CTGGAG 3 cut(s) 405, 663, 1083
HaeIII GGCC 2 cut(s) 1835, 2170
HapII CCGG 4 cut(s) 593, 1492, 1768, 1987
HhaI GCGC 3 cut(s) 1481, 1741, 2051
Hin6I GCGC 3 cut(s) 1479, 1739, 2049
HinP1I GCGC 3 cut(s) 1479, 1739, 2049
HincII GTYRAC 2 cut(s) 1512, 1714
HindII GTYRAC 2 cut(s) 1512, 1714
HindIII AAGCTT 1 cut(s) 1820
HpaI GTTAAC 1 cut(s) 1512
HpaII CCGG 4 cut(s) 593, 1492, 1768, 1987
HphI GGTGA 2 cut(s) 1211, 1345
Hpy166II GTNNAC 7 cut(s) 574, 1326, 1423, 1512, 1646, 1714, 1931
Hpy8I GTNNAC 7 cut(s) 574, 1326, 1423, 1512, 1646, 1714, 1931
Hpy99I CGWCG 5 cut(s) 2334, 2337, 2340, 2419, 2422
HpyCH4III ACNGT 7 cut(s) 46, 194, 476, 724, 872, 1702, 1903
HpyCH4IV ACGT 3 cut(s) 320, 998, 2414
HpyF10VI GCNNNNNNNGC 3 cut(s) 142, 820, 2391
HpyF3I CTNAG 4 cut(s) 80, 758, 1277, 1635
HpySE526I ACGT 3 cut(s) 320, 998, 2414
HspAI GCGC 3 cut(s) 1479, 1739, 2049
KpnI GGTACC 1 cut(s) 1791
KspAI GTTAAC 1 cut(s) 1512
Kzo9I GATC 6 cut(s) 1156, 1273, 1759, 1840, 2319, 2352
LmnI GCTCC 3 cut(s) 64, 644, 742
Lsp1109I GCAGC 3 cut(s) 576, 1355, 1927
LweI GCATC 9 cut(s) 17, 22, 274, 547, 695, 700, 952, 1216, 1474
MaeI CTAG 9 cut(s) 185, 201, 314, 537, 863, 879, 992, 1676, 1742
MaeII ACGT 3 cut(s) 320, 998, 2414
MaeIII GTNAC 7 cut(s) 268, 379, 946, 1057, 1199, 1652, 1903
MalI GATC 6 cut(s) 1158, 1275, 1761, 1842, 2321, 2354
MboI GATC 6 cut(s) 1156, 1273, 1759, 1840, 2319, 2352
MfeI CAATTG 2 cut(s) 207, 885
MflI RGATCY 1 cut(s) 1273
MhlI GDGCHC 4 cut(s) 69, 492, 747, 1780
MlyI GAGTC 3 cut(s) 451, 1381, 1482
MmeI TCCRAC 4 cut(s) 240, 918, 1542, 2154
MslI CAYNNNNRTG 1 cut(s) 1412
MspCI CTTAAG 1 cut(s) 1910
MspI CCGG 4 cut(s) 593, 1492, 1768, 1987
MspR9I CCNGG 3 cut(s) 89, 767, 1768
MunI CAATTG 2 cut(s) 207, 885
Mva1269I GAATGC 4 cut(s) 374, 1052, 2346, 2364
MvaI CCWGG 2 cut(s) 89, 767
MvnI CGCG 1 cut(s) 2049
MwoI GCNNNNNNNGC 3 cut(s) 142, 820, 2391
NciI CCSGG 1 cut(s) 1768
NdeII GATC 6 cut(s) 1156, 1273, 1759, 1840, 2319, 2352
NlaIV GGNNCC 3 cut(s) 646, 1789, 2036
NmeAIII GCCGAG 2 cut(s) 643, 2221
NmuCI GTSAC 6 cut(s) 268, 379, 946, 1057, 1199, 1903
NsbI TGCGCA 1 cut(s) 1480
NspI RCATGY 2 cut(s) 406, 1084
PagI TCATGA 2 cut(s) 1222, 1521
PctI GAATGC 4 cut(s) 374, 1052, 2346, 2364
PkrI GCNGC 3 cut(s) 591, 1370, 1942
Ple19I CGATCG 1 cut(s) 2355
PleI GAGTC 3 cut(s) 450, 1381, 1481
PpsI GAGTC 3 cut(s) 450, 1381, 1481
PpuMI RGGWCCY 1 cut(s) 2034
Psp5II RGGWCCY 1 cut(s) 2034
Psp6I CCWGG 2 cut(s) 87, 765
PspGI CCWGG 2 cut(s) 87, 765
PspN4I GGNNCC 3 cut(s) 646, 1789, 2036
PspPI GGNCC 2 cut(s) 1420, 2034
PspPPI RGGWCCY 1 cut(s) 2034
PsuI RGATCY 1 cut(s) 1273
PvuI CGATCG 1 cut(s) 2355
RsaI GTAC 5 cut(s) 48, 655, 726, 1443, 1789
RsaNI GTAC 5 cut(s) 47, 654, 725, 1442, 1788
RseI CAYNNNNRTG 1 cut(s) 1412
SatI GCNGC 3 cut(s) 590, 1369, 1941
Sau3AI GATC 6 cut(s) 1156, 1273, 1759, 1840, 2319, 2352
Sau96I GGNCC 2 cut(s) 1420, 2034
SchI GAGTC 3 cut(s) 451, 1381, 1482
ScrFI CCNGG 3 cut(s) 89, 767, 1768
SduI GDGCHC 4 cut(s) 69, 492, 747, 1780
SfaNI GCATC 9 cut(s) 17, 22, 274, 547, 695, 700, 952, 1216, 1474
SfcI CTRYAG 1 cut(s) 1382
SinI GGWCC 2 cut(s) 1420, 2034
SmiMI CAYNNNNRTG 1 cut(s) 1412
SmlI CTYRAG 5 cut(s) 395, 1073, 1172, 1454, 1910
SmoI CTYRAG 5 cut(s) 395, 1073, 1172, 1454, 1910
SpeI ACTAGT 2 cut(s) 200, 878
SsiI CCGC 1 cut(s) 2047
SspMI CTAG 9 cut(s) 185, 201, 314, 537, 863, 879, 992, 1676, 1742
StyD4I CCNGG 3 cut(s) 87, 765, 1766
StyI CCWWGG 2 cut(s) 178, 856
TaaI ACNGT 7 cut(s) 46, 194, 476, 724, 872, 1702, 1903
TaiI ACGT 3 cut(s) 323, 1001, 2417
TaqI TCGA 6 cut(s) 478, 1155, 2318, 2338, 2355, 2368
TatI WGTACW 1 cut(s) 1441
TscAI CASTG 4 cut(s) 589, 1122, 1639, 1964
TseFI GTSAC 6 cut(s) 268, 379, 946, 1057, 1199, 1903
TseI GCWGC 3 cut(s) 589, 1368, 1940
Tsp45I GTSAC 6 cut(s) 268, 379, 946, 1057, 1199, 1903
TspGWI ACGGA 1 cut(s) 2422
TspRI CASTG 4 cut(s) 589, 1122, 1639, 1964
Vha464I CTTAAG 1 cut(s) 1910
VpaK11BI GGWCC 2 cut(s) 1420, 2034
XapI RAATTY 7 cut(s) 600, 1132, 1432, 1459, 1565, 1886, 2010
XbaI TCTAGA 2 cut(s) 184, 862
XceI RCATGY 2 cut(s) 406, 1084
XspI CTAG 9 cut(s) 185, 201, 314, 537, 863, 879, 992, 1676, 1742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.