RchiOBHm_Chr3g0449531

diphthine-ammonia ligase activity

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
1287948 .. 1289541
1594 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41689

Sequence Viewer

Length: 1344 bp
ATGGTGGACAGGGTCAGTGCATTGCCCGATGACATCCTTGTTAGTTTAGTGTCCCGCTTGCCGCTAAAGGAAGCAGTAGCTACCAGTGTCCTTTCTAGGCGATGGCAGAATGTGGGACTGTCTACTATGAACCTTAGGTTTGATGCTGTTGACGGCTCAACTGACAATAATTTCCGCCACTACCCTTGGAAACTAAAAGAAGCTATAGAGTACTGGAAGCGCTGGAAATACATCGATTGGGTGAATCGTGTGGTGCAACAGTATAGAGGGAAACATATAGAAGAATTCAGGATCAGCCTCCCTTTAGATAGTCGCTTTTCAAGTTCCATTAATGAATGGATTCAATTTGCAATGGAAAAGAGTGTCGAAAGGCTTGAGTTGGATTTTGATCTAGCAGTTTCTACTAGATTTGAAGATTATACATTTCCCCACAAACTTTTGGGGATCTGCTTTCCAAGTCTGGGCTGTTGTGGATACAATATTGGTTTCAAGTCCCTCAAAGTTCTTCAGATCCGACATGTTGGCGTGACTGGAGAAGTTCTCGAGTATTTCCTGTCCAACTGTCCATTACTCGAGAGATTATCAGTCACTTGCGCAAAAGGTTTGGTTAATTTAAGAGTTGTTGGTTCATCGATTGCGTTGAAGTATTTGGTGATACAAAATTGTCATAACCTGGAAAGCATTGAAATCAGAGACGTAAACATCGTTTCATTTATTTATTGTGGATATCGTTCAACAAATATCAGTAACGTACCATTGCTTTCTGAGGTAACCGTTTCTAATCGGTGTTGTCCAAAGGATTTTATAAGGGTTGTGTTGAACCAACTTTCCTGCTGTCTTTCCAACATAGAGATTCTGAAGCTGCATCTCCAGCTGGGAGCGGGCCACAATGAGAATCCTGTATTGCCTCTATTTGCAAATCTGAAGCATTTGGAATTACTAGTTGTAGCAAATTATTATAAGGCACTTCATCATTTAAATAGCTTCCTCAAGGCATCTCCTTACTTGCAGAGACTCGTATTGAAGTTGCAGCTGTATTCGGAGAGAGCATGCATGGGAATGGGAGAAATTGAGAAAGCAGCTGATTGCCCCCATAATCACCTCAAGGTAGTAGAAATAGTTGGCTATCGAGCTCATAAATCTGGTGTTGAACTTGTCATGCACTTAATAAAGAATGGTCTTGGACTGGAGAAAATTGTGATTGATCCTGTACGGACATGGAGACACCCTAATGGAGCTGATAAGCCACATACAGAACTCGATGAAGAAGTGAAGGCAAGAGATCATGCTAAGCAATACCTTGAAGCAAAAATGCCTTCAACTGTAGAATTTGTGTGCCTGTAG

Protein Analysis

447

Amino Acids

51.09

Weight (kDa)

8.43

Isoelectric Point (pI)

44.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 89 - 444 4.7e-42 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 112 - 232 6.3e-08 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 362 - 401 1.5e-06 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 806, 960
Acc16I TGCGCA 1 cut(s) 595
AccBSI CCGCTC 1 cut(s) 881
AccI GTMKAC 1 cut(s) 122
AciI CCGC 4 cut(s) 55, 62, 175, 881
AclWI GGATC 4 cut(s) 299, 452, 505, 1199
AcsI RAATTY 2 cut(s) 284, 1328
AcuI CTGAAG 3 cut(s) 491, 878, 944
AfaI GTAC 3 cut(s) 212, 753, 1212
AfeI AGCGCT 1 cut(s) 221
AfiI CCNNNNNNNGG 1 cut(s) 461
AflIII ACRYGT 1 cut(s) 517
AhlI ACTAGT 1 cut(s) 940
AjnI CCWGG 1 cut(s) 672
AloI GAACNNNNNNTCC 2 cut(s) 812, 844
AluBI AGCT 9 cut(s) 80, 203, 862, 874, 984, 1033, 1082, 1133, 1238
AluI AGCT 9 cut(s) 80, 203, 862, 874, 984, 1033, 1082, 1133, 1238
Alw21I GWGCWC 1 cut(s) 1135
Alw26I GTCTC 3 cut(s) 687, 1006, 1216
AlwI GGATC 4 cut(s) 299, 452, 505, 1199
Ama87I CYCGRG 2 cut(s) 542, 572
Aor51HI AGCGCT 1 cut(s) 221
AoxI GGCC 1 cut(s) 883
ApeKI GCWGC 3 cut(s) 862, 1030, 1079
ApoI RAATTY 2 cut(s) 284, 1328
AseI ATTAAT 1 cut(s) 330
Asp700I GAANNNNTTC 1 cut(s) 339
AspLEI GCGC 2 cut(s) 222, 596
AspS9I GGNCC 1 cut(s) 883
AsuHPI GGTGA 3 cut(s) 253, 664, 1091
AvaI CYCGRG 2 cut(s) 542, 572
AxyI CCTNAGG 1 cut(s) 134
BanII GRGCYC 1 cut(s) 1135
Bbv12I GWGCWC 1 cut(s) 1135
BbvI GCAGC 3 cut(s) 849, 1042, 1091
BccI CCATC 1 cut(s) 96
BceAI ACGGC 1 cut(s) 169
BciT130I CCWGG 1 cut(s) 674
BciVI GTATCC 1 cut(s) 467
BcoDI GTCTC 3 cut(s) 687, 1006, 1216
BcuI ACTAGT 1 cut(s) 940
BfaI CTAG 4 cut(s) 96, 392, 405, 941
BfmI CTRYAG 3 cut(s) 204, 1323, 1340
BfoI RGCGCY 1 cut(s) 223
BfuI GTATCC 1 cut(s) 467
BisI GCNGC 4 cut(s) 62, 863, 1031, 1080
BlpI GCTNAGC 1 cut(s) 1290
BlsI GCNGC 4 cut(s) 63, 864, 1032, 1081
BmcAI AGTACT 1 cut(s) 212
Bme1390I CCNGG 1 cut(s) 674
BmeT110I CYCGRG 2 cut(s) 542, 572
BmgT120I GGNCC 1 cut(s) 883
BmrFI CCNGG 1 cut(s) 674
BmsI GCATC 3 cut(s) 133, 874, 1004
BplI GAGNNNNNCTC 2 cut(s) 525, 557
BpmI CTGGAG 3 cut(s) 552, 854, 1208
Bpu1102I GCTNAGC 1 cut(s) 1290
BpuEI CTTGAG 3 cut(s) 395, 974, 1088
Bsa29I ATCGAT 2 cut(s) 234, 632
BsaBI GATNNNNATC 1 cut(s) 387
BsaJI CCNNGG 1 cut(s) 185
Bsc4I CCNNNNNNNGG 1 cut(s) 461
Bse1I ACTGG 4 cut(s) 84, 218, 535, 1191
Bse21I CCTNAGG 1 cut(s) 134
Bse3DI GCAATG 3 cut(s) 20, 357, 755
Bse8I GATNNNNATC 1 cut(s) 387
BseBI CCWGG 1 cut(s) 674
BseCI ATCGAT 2 cut(s) 234, 632
BseDI CCNNGG 1 cut(s) 185
BseGI GGATG 1 cut(s) 33
BseJI GATNNNNATC 1 cut(s) 387
BseLI CCNNNNNNNGG 1 cut(s) 461
BseMI GCAATG 3 cut(s) 20, 357, 755
BseMII CTCAG 1 cut(s) 756
BseNI ACTGG 4 cut(s) 84, 218, 535, 1191
BseXI GCAGC 3 cut(s) 849, 1042, 1091
BseYI CCCAGC 1 cut(s) 874
BshFI GGCC 1 cut(s) 885
BshVI ATCGAT 2 cut(s) 234, 632
BsiHKAI GWGCWC 1 cut(s) 1135
BsiHKCI CYCGRG 2 cut(s) 542, 572
BslFI GGGAC 3 cut(s) 37, 129, 478
BslI CCNNNNNNNGG 1 cut(s) 461
BsmAI GTCTC 3 cut(s) 687, 1006, 1216
BsmBI CGTCTC 1 cut(s) 687
BsmFI GGGAC 3 cut(s) 37, 129, 478
BsnI GGCC 1 cut(s) 885
BsoBI CYCGRG 2 cut(s) 542, 572
Bsp1286I GDGCHC 1 cut(s) 1135
Bsp143I GATC 6 cut(s) 291, 388, 444, 510, 1204, 1282
Bsp1720I GCTNAGC 1 cut(s) 1290
BspACI CCGC 4 cut(s) 55, 62, 175, 881
BspANI GGCC 1 cut(s) 885
BspCNI CTCAG 1 cut(s) 757
BspDI ATCGAT 2 cut(s) 234, 632
BspPI GGATC 4 cut(s) 299, 452, 505, 1199
BsrBI CCGCTC 1 cut(s) 881
BsrDI GCAATG 3 cut(s) 20, 357, 755
BsrI ACTGG 4 cut(s) 84, 218, 535, 1191
BssECI CCNNGG 1 cut(s) 185
BssMI GATC 6 cut(s) 291, 388, 444, 510, 1204, 1282
BssT1I CCWWGG 1 cut(s) 185
Bst2UI CCWGG 1 cut(s) 674
Bst4CI ACNGT 5 cut(s) 120, 261, 563, 775, 1324
BstC8I GCNNGC 3 cut(s) 59, 883, 1051
BstDEI CTNAG 3 cut(s) 134, 765, 1290
BstEII GGTNACC 1 cut(s) 769
BstF5I GGATG 1 cut(s) 33
BstH2I RGCGCY 1 cut(s) 223
BstHHI GCGC 2 cut(s) 222, 596
BstKTI GATC 6 cut(s) 294, 391, 447, 513, 1207, 1285
BstMAI GTCTC 3 cut(s) 687, 1006, 1216
BstMBI GATC 6 cut(s) 291, 388, 444, 510, 1204, 1282
BstMWI GCNNNNNNNGC 1 cut(s) 871
BstNI CCWGG 1 cut(s) 674
BstNSI RCATGY 2 cut(s) 521, 1053
BstPI GGTNACC 1 cut(s) 769
BstSCI CCNGG 1 cut(s) 672
BstSFI CTRYAG 3 cut(s) 204, 1323, 1340
BstV1I GCAGC 3 cut(s) 849, 1042, 1091
BstX2I RGATCY 2 cut(s) 444, 510
BstYI RGATCY 2 cut(s) 444, 510
Bsu15I ATCGAT 2 cut(s) 234, 632
Bsu36I CCTNAGG 1 cut(s) 134
BsuI GTATCC 1 cut(s) 467
BsuRI GGCC 1 cut(s) 885
BsuTUI ATCGAT 2 cut(s) 234, 632
BtgZI GCGATG 1 cut(s) 115
BtsCI GGATG 1 cut(s) 33
BtsIMutI CAGTG 2 cut(s) 22, 91
Cac8I GCNNGC 3 cut(s) 59, 883, 1051
CfoI GCGC 2 cut(s) 222, 596
Cfr13I GGNCC 1 cut(s) 883
ClaI ATCGAT 2 cut(s) 234, 632
Csp6I GTAC 3 cut(s) 211, 752, 1211
CspCI CAANNNNNGTGG 2 cut(s) 167, 202
CviAII CATG 6 cut(s) 518, 1050, 1054, 1159, 1218, 1286
CviQI GTAC 3 cut(s) 211, 752, 1211
DdeI CTNAG 3 cut(s) 134, 765, 1290
DpnI GATC 6 cut(s) 293, 390, 446, 512, 1206, 1284
DpnII GATC 6 cut(s) 291, 388, 444, 510, 1204, 1282
DraI TTTAAA 1 cut(s) 978
EciI GGCGGA 1 cut(s) 164
Ecl136II GAGCTC 1 cut(s) 1133
Eco130I CCWWGG 1 cut(s) 185
Eco24I GRGCYC 1 cut(s) 1135
Eco32I GATATC 1 cut(s) 728
Eco47III AGCGCT 1 cut(s) 221
Eco53kI GAGCTC 1 cut(s) 1133
Eco57I CTGAAG 3 cut(s) 491, 878, 944
Eco81I CCTNAGG 1 cut(s) 134
Eco88I CYCGRG 2 cut(s) 542, 572
Eco91I GGTNACC 1 cut(s) 769
EcoICRI GAGCTC 1 cut(s) 1133
EcoO65I GGTNACC 1 cut(s) 769
EcoRI GAATTC 1 cut(s) 284
EcoRII CCWGG 1 cut(s) 672
EcoRV GATATC 1 cut(s) 728
EcoT14I CCWWGG 1 cut(s) 185
EcoT22I ATGCAT 1 cut(s) 1055
EcoT38I GRGCYC 1 cut(s) 1135
ErhI CCWWGG 1 cut(s) 185
Esp3I CGTCTC 1 cut(s) 687
FaeI CATG 6 cut(s) 521, 1053, 1057, 1162, 1221, 1289
FaqI GGGAC 3 cut(s) 37, 129, 478
FatI CATG 6 cut(s) 517, 1049, 1053, 1158, 1217, 1285
FauI CCCGC 2 cut(s) 62, 874
FblI GTMKAC 1 cut(s) 122
Fnu4HI GCNGC 4 cut(s) 62, 863, 1031, 1080
FokI GGATG 1 cut(s) 20
FriOI GRGCYC 1 cut(s) 1135
Fsp4HI GCNGC 4 cut(s) 62, 863, 1031, 1080
FspBI CTAG 4 cut(s) 96, 392, 405, 941
FspI TGCGCA 1 cut(s) 595
GlaI GCGC 2 cut(s) 221, 595
GluI GCNGC 4 cut(s) 62, 863, 1031, 1080
GsaI CCCAGC 1 cut(s) 878
GsuI CTGGAG 3 cut(s) 552, 854, 1208
HaeII RGCGCY 1 cut(s) 223
HaeIII GGCC 1 cut(s) 885
HhaI GCGC 2 cut(s) 222, 596
Hin1II CATG 6 cut(s) 521, 1053, 1057, 1162, 1221, 1289
Hin6I GCGC 2 cut(s) 220, 594
HinP1I GCGC 2 cut(s) 220, 594
HincII GTYRAC 1 cut(s) 151
HindII GTYRAC 1 cut(s) 151
HinfI GANTC 5 cut(s) 244, 340, 853, 895, 1014
HphI GGTGA 3 cut(s) 253, 664, 1091
Hpy166II GTNNAC 4 cut(s) 7, 123, 151, 700
Hpy188I TCNGA 7 cut(s) 510, 515, 692, 766, 858, 924, 1042
Hpy188III TCNNGA 3 cut(s) 289, 542, 574
Hpy8I GTNNAC 4 cut(s) 7, 123, 151, 700
HpyAV CCTTC 2 cut(s) 1267, 1326
HpyCH4III ACNGT 5 cut(s) 120, 261, 563, 775, 1324
HpyCH4IV ACGT 2 cut(s) 696, 750
HpyCH4V TGCA 9 cut(s) 20, 256, 350, 865, 917, 1009, 1030, 1053, 1162
HpyF10VI GCNNNNNNNGC 1 cut(s) 871
HpyF3I CTNAG 3 cut(s) 134, 765, 1290
HpySE526I ACGT 2 cut(s) 696, 750
Hsp92II CATG 6 cut(s) 521, 1053, 1057, 1162, 1221, 1289
HspAI GCGC 2 cut(s) 220, 594
Kzo9I GATC 6 cut(s) 291, 388, 444, 510, 1204, 1282
LmnI GCTCC 2 cut(s) 878, 1235
Lsp1109I GCAGC 3 cut(s) 849, 1042, 1091
LweI GCATC 3 cut(s) 133, 874, 1004
MaeI CTAG 4 cut(s) 96, 392, 405, 941
MaeII ACGT 2 cut(s) 696, 750
MaeIII GTNAC 4 cut(s) 526, 586, 746, 769
MalI GATC 6 cut(s) 293, 390, 446, 512, 1206, 1284
MbiI CCGCTC 1 cut(s) 881
MboI GATC 6 cut(s) 291, 388, 444, 510, 1204, 1282
MboII GAAGA 4 cut(s) 293, 425, 497, 1277
MflI RGATCY 2 cut(s) 444, 510
MhlI GDGCHC 1 cut(s) 1135
MlyI GAGTC 1 cut(s) 1008
MmeI TCCRAC 4 cut(s) 360, 538, 582, 867
MnlI CCTC 7 cut(s) 260, 308, 506, 760, 918, 998, 1112
Mph1103I ATGCAT 1 cut(s) 1055
MroXI GAANNNNTTC 1 cut(s) 339
MseI TTAA 5 cut(s) 330, 609, 614, 977, 1166
MslI CAYNNNNRTG 2 cut(s) 1058, 1230
MspA1I CMGCKG 3 cut(s) 874, 1033, 1082
MspR9I CCNGG 1 cut(s) 674
MvaI CCWGG 1 cut(s) 674
MwoI GCNNNNNNNGC 1 cut(s) 871
NdeII GATC 6 cut(s) 291, 388, 444, 510, 1204, 1282
NlaIII CATG 6 cut(s) 521, 1053, 1057, 1162, 1221, 1289
NmuCI GTSAC 2 cut(s) 526, 586
NsbI TGCGCA 1 cut(s) 595
NsiI ATGCAT 1 cut(s) 1055
NspI RCATGY 2 cut(s) 521, 1053
PaeI GCATGC 1 cut(s) 1053
PaeR7I CTCGAG 2 cut(s) 542, 572
PciI ACATGT 1 cut(s) 517
PcsI WCGNNNNNNNCGW 1 cut(s) 702
PdmI GAANNNNTTC 1 cut(s) 339
PfeI GAWTC 4 cut(s) 244, 340, 853, 895
PflFI GACNNNGTC 1 cut(s) 11
PkrI GCNGC 4 cut(s) 63, 864, 1032, 1081
PleI GAGTC 1 cut(s) 1008
PpsI GAGTC 1 cut(s) 1008
PscI ACATGT 1 cut(s) 517
PshBI ATTAAT 1 cut(s) 330
PsiI TTATAA 2 cut(s) 806, 960
Psp124BI GAGCTC 1 cut(s) 1135
Psp6I CCWGG 1 cut(s) 672
PspEI GGTNACC 1 cut(s) 769
PspFI CCCAGC 1 cut(s) 874
PspGI CCWGG 1 cut(s) 672
PspPI GGNCC 1 cut(s) 883
PsuI RGATCY 2 cut(s) 444, 510
PsyI GACNNNGTC 1 cut(s) 11
PvuII CAGCTG 3 cut(s) 874, 1033, 1082
RsaI GTAC 3 cut(s) 212, 753, 1212
RsaNI GTAC 3 cut(s) 211, 752, 1211
RseI CAYNNNNRTG 2 cut(s) 1058, 1230
SacI GAGCTC 1 cut(s) 1135
SaqAI TTAA 5 cut(s) 330, 609, 614, 977, 1166
SatI GCNGC 4 cut(s) 62, 863, 1031, 1080
Sau3AI GATC 6 cut(s) 291, 388, 444, 510, 1204, 1282
Sau96I GGNCC 1 cut(s) 883
ScaI AGTACT 1 cut(s) 212
SchI GAGTC 1 cut(s) 1008
ScrFI CCNGG 1 cut(s) 674
SduI GDGCHC 1 cut(s) 1135
SfaNI GCATC 3 cut(s) 133, 874, 1004
SfcI CTRYAG 3 cut(s) 204, 1323, 1340
Sfr274I CTCGAG 2 cut(s) 542, 572
SlaI CTCGAG 2 cut(s) 542, 572
SmiI ATTTAAAT 1 cut(s) 978
SmiMI CAYNNNNRTG 2 cut(s) 1058, 1230
SmlI CTYRAG 5 cut(s) 374, 542, 572, 989, 1103
SmoI CTYRAG 5 cut(s) 374, 542, 572, 989, 1103
SpeI ACTAGT 1 cut(s) 940
SphI GCATGC 1 cut(s) 1053
SsiI CCGC 4 cut(s) 55, 62, 175, 881
SspI AATATT 1 cut(s) 481
SspMI CTAG 4 cut(s) 96, 392, 405, 941
SstI GAGCTC 1 cut(s) 1135
StyD4I CCNGG 1 cut(s) 672
StyI CCWWGG 1 cut(s) 185
SwaI ATTTAAAT 1 cut(s) 978
TaaI ACNGT 5 cut(s) 120, 261, 563, 775, 1324
TaiI ACGT 2 cut(s) 699, 753
TaqI TCGA 7 cut(s) 234, 366, 543, 573, 632, 1129, 1260
TatI WGTACW 1 cut(s) 210
TauI GCSGC 1 cut(s) 64
TfiI GAWTC 4 cut(s) 244, 340, 853, 895
Tru1I TTAA 5 cut(s) 330, 609, 614, 977, 1166
Tru9I TTAA 5 cut(s) 330, 609, 614, 977, 1166
TscAI CASTG 2 cut(s) 22, 91
TseFI GTSAC 2 cut(s) 526, 586
TseI GCWGC 3 cut(s) 862, 1030, 1079
Tsp45I GTSAC 2 cut(s) 526, 586
TspDTI ATGAA 6 cut(s) 143, 348, 618, 699, 959, 1278
TspGWI ACGGA 1 cut(s) 1228
TspRI CASTG 2 cut(s) 22, 91
Tth111I GACNNNGTC 1 cut(s) 11
VspI ATTAAT 1 cut(s) 330
XapI RAATTY 2 cut(s) 284, 1328
XceI RCATGY 2 cut(s) 521, 1053
XhoI CTCGAG 2 cut(s) 542, 572
XmiI GTMKAC 1 cut(s) 122
XmnI GAANNNNTTC 1 cut(s) 339
XspI CTAG 4 cut(s) 96, 392, 405, 941
ZrmI AGTACT 1 cut(s) 212
Zsp2I ATGCAT 1 cut(s) 1055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.