Rw2G013960

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000095
Physical Location & Seq
Forward (+)
15197364 .. 15205885
8522 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G013960.1

Sequence Viewer

Length: 1317 bp
ATGTTCAAAGATGTTGCTGGCAACATGATGGACAGAATCAGTGGATTGCCGGATGAAATTCTTGTGAGTATACTGTCTCTGTTGCCCCTGAAGGAAGCGCAAGCTACTAGTATCCTTTCTAGGAGGTGGCAGTATGTGTGGGCGTATTGTACCACTCTCAACTTTGATGATGAGAAGAATTTAGTCAGATTGCGGCTGTCCGACAGAGAAGCGCTCGAATTGGAAATGTGTAGGTACGTCAATTGGGTGGATAGTGTGTTGAAACAGCATAGAGCCTTAAACATTGAGCGATTCAGGGTTTATTTTAAGCTTGATTCTAGAAGTTGTATTGATAAATGGATTCAATTTGCAACGAGGAAAGGAGTTCAAATGCTTGAGTTGGACTTTGTATGTACTCTTTATCTACATCTTCCGAAATACAGATTTAGTAACAAACTGTTAGGTATCAGCAAAACCTCTGCTTCGAAGTCCTTGTGTTCTGAATACATTGGTTTTAAGTGCCTCAAAGTTCTTGATTTGAAAACTGTTGATGTGGACCAAGAAGTTCTTGAGTACTTTTTGTCTAACTCTCGAGGTCTTGAACGACTGTCTGTGTCTGATTCTTCAACACTGGTTAATCTAAAAGTAACCAGTCATTCTATTGCATTGAAGTACTTGGTAATAAAACGATGTAAAAATATCAAAACCATTGAGATCTGTGACTCAAACCTAGTTTCATTTGTTTATGATGGACCTGTGAGAAACTTGGTTCTTAGTAATCTACCACTTCTTGTTGAGGTTTCCCTTTTTGGATGGTTGGCACCCGATTTCTTAGAGATTGCCTTCTTACAACTGTCCTGCTGTCTTTCTCAACTGGAGATTCTCAAATTCAGCTATATGAATGCGTGGAGCAAAATGGACCCTGTGCTTCCTTCATTACCTAATCTTAAGCGTTTGGAATTAGTAATTGATGAATATGAAAACTTTGCTCTTCTTCATCTCGCATCTTTCATTAAGGAATCTCCTTGCATGCATACACTTGTGTTGCGGGACCCTTTCCCAACAAGAAAGCCGTGCTCCCATCATAACCTCAAGGTAGTGGAAATTATAAGATATGCCGGCACCACACGTCAGATTGAACTTGTGAAGTACGTGACGAAAACTGCTATTAAATTGGAGAAAATTGTTTTTAACAGTGTCTGTCATGGGCATTACCGTACAAGAGTTGACAGACTAGCCGAGATTGGGCATGGAGCATGGCGCAAAGAATGGTTATCTAATCAGGTTCGGAGGATTAAGAAAAAGTTGCCTGCAAGTGTAGAAGTTGTGTGCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

438

Amino Acids

50.67

Weight (kDa)

9.09

Isoelectric Point (pI)

39.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 13 - 48 1.2e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 86 - 400 8.2e-26 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 110 - 223 2.7e-09 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 352 - 390 9.1e-06 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1088
AccB1I GGYRCC 2 cut(s) 799, 1100
AccI GTMKAC 1 cut(s) 70
AciI CCGC 2 cut(s) 193, 1027
AcsI RAATTY 3 cut(s) 57, 178, 866
AcuI CTGAAG 1 cut(s) 110
AfaI GTAC 7 cut(s) 151, 236, 394, 554, 653, 1130, 1198
AfeI AGCGCT 1 cut(s) 213
AfiI CCNNNNNNNGG 1 cut(s) 1224
AflII CTTAAG 1 cut(s) 926
AflIII ACRYGT 1 cut(s) 1106
AgsI TTSAA 9 cut(s) 7, 262, 344, 368, 520, 581, 606, 649, 1118
AhlI ACTAGT 1 cut(s) 107
AjiI CACGTC 1 cut(s) 1109
AluBI AGCT 3 cut(s) 104, 310, 873
AluI AGCT 3 cut(s) 104, 310, 873
Alw21I GWGCWC 1 cut(s) 1058
Alw26I GTCTC 1 cut(s) 81
AlwNI CAGNNNCTG 1 cut(s) 1179
Ama87I CYCGRG 1 cut(s) 570
Aor51HI AGCGCT 1 cut(s) 213
ApoI RAATTY 3 cut(s) 57, 178, 866
AspLEI GCGC 3 cut(s) 100, 214, 1242
AspS9I GGNCC 4 cut(s) 535, 731, 898, 1030
AsuII TTCGAA 1 cut(s) 464
AvaI CYCGRG 1 cut(s) 570
AvaII GGWCC 4 cut(s) 535, 731, 898, 1030
BanI GGYRCC 2 cut(s) 799, 1100
Bbv12I GWGCWC 1 cut(s) 1058
BccI CCATC 4 cut(s) 22, 722, 786, 1068
BceAI ACGGC 1 cut(s) 1036
BciVI GTATCC 1 cut(s) 122
BcoDI GTCTC 1 cut(s) 81
BcuI ACTAGT 1 cut(s) 107
BfaI CTAG 5 cut(s) 108, 120, 318, 710, 1214
BfoI RGCGCY 1 cut(s) 215
BfrI CTTAAG 1 cut(s) 926
BfuI GTATCC 1 cut(s) 122
BglII AGATCT 1 cut(s) 693
BisI GCNGC 1 cut(s) 194
BlsI GCNGC 1 cut(s) 195
BmcAI AGTACT 2 cut(s) 554, 653
Bme18I GGWCC 4 cut(s) 535, 731, 898, 1030
BmeT110I CYCGRG 1 cut(s) 570
BmgBI CACGTC 1 cut(s) 1109
BmgT120I GGNCC 4 cut(s) 535, 731, 898, 1030
BmiI GGNNCC 5 cut(s) 801, 900, 1031, 1032, 1102
BmsI GCATC 1 cut(s) 992
BplI GAGNNNNNCTC 2 cut(s) 198, 230
BpmI CTGGAG 1 cut(s) 875
Bpu14I TTCGAA 1 cut(s) 464
BpuEI CTTGAG 3 cut(s) 395, 569, 1055
BsaAI YACGTR 1 cut(s) 1132
Bsc4I CCNNNNNNNGG 1 cut(s) 1224
Bse118I RCCGGY 1 cut(s) 1097
Bse1I ACTGG 3 cut(s) 615, 630, 858
BseGI GGATG 2 cut(s) 58, 797
BseLI CCNNNNNNNGG 1 cut(s) 1224
BseNI ACTGG 3 cut(s) 615, 630, 858
BshNI GGYRCC 2 cut(s) 799, 1100
BsiHKAI GWGCWC 1 cut(s) 1058
BsiHKCI CYCGRG 1 cut(s) 570
BsiSI CCGG 2 cut(s) 50, 1098
BslFI GGGAC 1 cut(s) 1043
BslI CCNNNNNNNGG 1 cut(s) 1224
BsmAI GTCTC 1 cut(s) 81
BsmFI GGGAC 1 cut(s) 1043
BsmI GAATGC 1 cut(s) 886
BsoBI CYCGRG 1 cut(s) 570
Bsp119I TTCGAA 1 cut(s) 464
Bsp1286I GDGCHC 1 cut(s) 1058
Bsp143I GATC 1 cut(s) 693
BspACI CCGC 2 cut(s) 193, 1027
BspLI GGNNCC 5 cut(s) 801, 900, 1031, 1032, 1102
BspQI GCTCTTC 1 cut(s) 975
BspT104I TTCGAA 1 cut(s) 464
BspT107I GGYRCC 2 cut(s) 799, 1100
BspTI CTTAAG 1 cut(s) 926
BsrFI RCCGGY 1 cut(s) 1097
BsrI ACTGG 3 cut(s) 615, 630, 858
BssAI RCCGGY 1 cut(s) 1097
BssMI GATC 1 cut(s) 693
BssNAI GTATAC 1 cut(s) 71
Bst1107I GTATAC 1 cut(s) 71
Bst4CI ACNGT 7 cut(s) 75, 438, 526, 588, 834, 1175, 1196
Bst6I CTCTTC 1 cut(s) 975
BstAFI CTTAAG 1 cut(s) 926
BstBAI YACGTR 1 cut(s) 1132
BstBI TTCGAA 1 cut(s) 464
BstC8I GCNNGC 5 cut(s) 19, 102, 1010, 1099, 1290
BstDEI CTNAG 2 cut(s) 752, 811
BstF5I GGATG 2 cut(s) 58, 797
BstH2I RGCGCY 1 cut(s) 215
BstHHI GCGC 3 cut(s) 100, 214, 1242
BstKTI GATC 1 cut(s) 696
BstMAI GTCTC 1 cut(s) 81
BstMBI GATC 1 cut(s) 693
BstNSI RCATGY 1 cut(s) 1012
BstX2I RGATCY 1 cut(s) 693
BstYI RGATCY 1 cut(s) 693
BstZ17I GTATAC 1 cut(s) 71
BsuI GTATCC 1 cut(s) 122
BtrI CACGTC 1 cut(s) 1109
BtsCI GGATG 2 cut(s) 58, 797
BtsIMutI CAGTG 3 cut(s) 46, 608, 1180
Cac8I GCNNGC 5 cut(s) 19, 102, 1010, 1099, 1290
CaiI CAGNNNCTG 1 cut(s) 1179
CfoI GCGC 3 cut(s) 100, 214, 1242
Cfr10I RCCGGY 1 cut(s) 1097
Cfr13I GGNCC 4 cut(s) 535, 731, 898, 1030
Csp6I GTAC 7 cut(s) 150, 235, 393, 553, 652, 1129, 1197
CviAII CATG 5 cut(s) 25, 1009, 1184, 1229, 1236
CviJI RGCY 7 cut(s) 104, 196, 275, 310, 873, 1051, 1217
CviKI_1 RGCY 7 cut(s) 104, 196, 275, 310, 873, 1051, 1217
CviQI GTAC 7 cut(s) 150, 235, 393, 553, 652, 1129, 1197
DdeI CTNAG 2 cut(s) 752, 811
DpnI GATC 1 cut(s) 695
DpnII GATC 1 cut(s) 693
Eam1104I CTCTTC 1 cut(s) 975
EarI CTCTTC 1 cut(s) 975
Eco47I GGWCC 4 cut(s) 535, 731, 898, 1030
Eco47III AGCGCT 1 cut(s) 213
Eco57I CTGAAG 1 cut(s) 110
Eco88I CYCGRG 1 cut(s) 570
EcoO109I RGGNCCY 1 cut(s) 1030
EcoT22I ATGCAT 1 cut(s) 1014
FaeI CATG 5 cut(s) 28, 1012, 1187, 1232, 1239
FalI AAGNNNNNCTT 2 cut(s) 531, 563
FaqI GGGAC 1 cut(s) 1043
FatI CATG 5 cut(s) 24, 1008, 1183, 1228, 1235
FauI CCCGC 1 cut(s) 1020
FblI GTMKAC 1 cut(s) 70
Fnu4HI GCNGC 1 cut(s) 194
FokI GGATG 2 cut(s) 65, 804
Fsp4HI GCNGC 1 cut(s) 194
FspBI CTAG 5 cut(s) 108, 120, 318, 710, 1214
GlaI GCGC 3 cut(s) 99, 213, 1241
GluI GCNGC 1 cut(s) 194
GsuI CTGGAG 1 cut(s) 875
HaeII RGCGCY 1 cut(s) 215
HapII CCGG 2 cut(s) 50, 1098
HhaI GCGC 3 cut(s) 100, 214, 1242
Hin1II CATG 5 cut(s) 28, 1012, 1187, 1232, 1239
Hin6I GCGC 3 cut(s) 98, 212, 1240
HinP1I GCGC 3 cut(s) 98, 212, 1240
HincII GTYRAC 1 cut(s) 1207
HindII GTYRAC 1 cut(s) 1207
HindIII AAGCTT 1 cut(s) 308
HinfI GANTC 8 cut(s) 36, 291, 314, 340, 599, 701, 859, 998
HpaII CCGG 2 cut(s) 50, 1098
Hpy166II GTNNAC 3 cut(s) 71, 535, 1207
Hpy188I TCNGA 7 cut(s) 188, 202, 414, 481, 598, 1113, 1269
Hpy188III TCNNGA 5 cut(s) 318, 512, 548, 570, 578
Hpy8I GTNNAC 3 cut(s) 71, 535, 1207
HpyAV CCTTC 3 cut(s) 85, 832, 921
HpyCH4III ACNGT 7 cut(s) 75, 438, 526, 588, 834, 1175, 1196
HpyCH4IV ACGT 3 cut(s) 237, 1108, 1131
HpyCH4V TGCA 5 cut(s) 350, 644, 1008, 1012, 1292
HpyF3I CTNAG 2 cut(s) 752, 811
HpySE526I ACGT 3 cut(s) 237, 1108, 1131
Hsp92II CATG 5 cut(s) 28, 1012, 1187, 1232, 1239
HspAI GCGC 3 cut(s) 98, 212, 1240
KflI GGGWCCC 1 cut(s) 1030
KroI GCCGGC 1 cut(s) 1097
KroNI GCCGGC 1 cut(s) 1099
Kzo9I GATC 1 cut(s) 693
LguI GCTCTTC 1 cut(s) 975
LmnI GCTCC 3 cut(s) 888, 1061, 1232
LweI GCATC 1 cut(s) 992
MaeI CTAG 5 cut(s) 108, 120, 318, 710, 1214
MaeII ACGT 3 cut(s) 237, 1108, 1131
MaeIII GTNAC 4 cut(s) 428, 625, 698, 1132
MalI GATC 1 cut(s) 695
MboI GATC 1 cut(s) 693
MboII GAAGA 5 cut(s) 187, 401, 594, 962, 965
MfeI CAATTG 1 cut(s) 241
MflI RGATCY 1 cut(s) 693
MhlI GDGCHC 1 cut(s) 1058
MlyI GAGTC 1 cut(s) 695
MmeI TCCRAC 2 cut(s) 225, 360
MnlI CCTC 8 cut(s) 117, 348, 466, 512, 566, 769, 1079, 1263
Mph1103I ATGCAT 1 cut(s) 1014
MroNI GCCGGC 1 cut(s) 1097
MseI TTAA 9 cut(s) 278, 306, 495, 615, 927, 993, 1149, 1170, 1275
MspCI CTTAAG 1 cut(s) 926
MspI CCGG 2 cut(s) 50, 1098
MunI CAATTG 1 cut(s) 241
Mva1269I GAATGC 1 cut(s) 886
NaeI GCCGGC 1 cut(s) 1099
NdeII GATC 1 cut(s) 693
NgoMIV GCCGGC 1 cut(s) 1097
NlaIII CATG 5 cut(s) 28, 1012, 1187, 1232, 1239
NlaIV GGNNCC 5 cut(s) 801, 900, 1031, 1032, 1102
NmeAIII GCCGAG 1 cut(s) 1243
NmuCI GTSAC 2 cut(s) 698, 1132
NsiI ATGCAT 1 cut(s) 1014
NspI RCATGY 1 cut(s) 1012
NspV TTCGAA 1 cut(s) 464
PaeI GCATGC 1 cut(s) 1012
PaeR7I CTCGAG 1 cut(s) 570
PciSI GCTCTTC 1 cut(s) 975
PctI GAATGC 1 cut(s) 886
PdiI GCCGGC 1 cut(s) 1099
PfeI GAWTC 7 cut(s) 36, 291, 314, 340, 599, 859, 998
PkrI GCNGC 1 cut(s) 195
PleI GAGTC 1 cut(s) 695
PpsI GAGTC 1 cut(s) 695
Ppu21I YACGTR 1 cut(s) 1132
PpuMI RGGWCCY 1 cut(s) 1030
PsiI TTATAA 1 cut(s) 1088
Psp5II RGGWCCY 1 cut(s) 1030
PspN4I GGNNCC 5 cut(s) 801, 900, 1031, 1032, 1102
PspPI GGNCC 4 cut(s) 535, 731, 898, 1030
PspPPI RGGWCCY 1 cut(s) 1030
PstNI CAGNNNCTG 1 cut(s) 1179
PsuI RGATCY 1 cut(s) 693
RsaI GTAC 7 cut(s) 151, 236, 394, 554, 653, 1130, 1198
RsaNI GTAC 7 cut(s) 150, 235, 393, 553, 652, 1129, 1197
SapI GCTCTTC 1 cut(s) 975
SaqAI TTAA 9 cut(s) 278, 306, 495, 615, 927, 993, 1149, 1170, 1275
SatI GCNGC 1 cut(s) 194
Sau3AI GATC 1 cut(s) 693
Sau96I GGNCC 4 cut(s) 535, 731, 898, 1030
ScaI AGTACT 2 cut(s) 554, 653
SchI GAGTC 1 cut(s) 695
SduI GDGCHC 1 cut(s) 1058
SfaNI GCATC 1 cut(s) 992
Sfr274I CTCGAG 1 cut(s) 570
SfuI TTCGAA 1 cut(s) 464
SinI GGWCC 4 cut(s) 535, 731, 898, 1030
SlaI CTCGAG 1 cut(s) 570
SmlI CTYRAG 5 cut(s) 374, 548, 570, 926, 1070
SmoI CTYRAG 5 cut(s) 374, 548, 570, 926, 1070
SpeI ACTAGT 1 cut(s) 107
SphI GCATGC 1 cut(s) 1012
SsiI CCGC 2 cut(s) 193, 1027
SspMI CTAG 5 cut(s) 108, 120, 318, 710, 1214
TaaI ACNGT 7 cut(s) 75, 438, 526, 588, 834, 1175, 1196
TaiI ACGT 3 cut(s) 240, 1111, 1134
TaqI TCGA 3 cut(s) 216, 464, 571
TatI WGTACW 3 cut(s) 392, 552, 651
TauI GCSGC 1 cut(s) 196
TfiI GAWTC 7 cut(s) 36, 291, 314, 340, 599, 859, 998
Tru1I TTAA 9 cut(s) 278, 306, 495, 615, 927, 993, 1149, 1170, 1275
Tru9I TTAA 9 cut(s) 278, 306, 495, 615, 927, 993, 1149, 1170, 1275
TscAI CASTG 3 cut(s) 46, 615, 1180
TseFI GTSAC 2 cut(s) 698, 1132
Tsp45I GTSAC 2 cut(s) 698, 1132
TspDTI ATGAA 8 cut(s) 69, 705, 893, 903, 965, 966, 972, 979
TspRI CASTG 3 cut(s) 46, 615, 1180
Vha464I CTTAAG 1 cut(s) 926
VpaK11BI GGWCC 4 cut(s) 535, 731, 898, 1030
XapI RAATTY 3 cut(s) 57, 178, 866
XbaI TCTAGA 1 cut(s) 317
XceI RCATGY 1 cut(s) 1012
XhoI CTCGAG 1 cut(s) 570
XmiI GTMKAC 1 cut(s) 70
XspI CTAG 5 cut(s) 108, 120, 318, 710, 1214
ZrmI AGTACT 2 cut(s) 554, 653
Zsp2I ATGCAT 1 cut(s) 1014
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.