Rh7CG068000

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000095
Physical Location & Seq
Forward (+)
4845148 .. 4846664
1517 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG068000.1

Sequence Viewer

Length: 1305 bp
ATGAAGAGAAAGGTATGTCCGACTTCTGAAATTGACGACCAGAACAAATCGATAAAATTAGAGTCAGTGGATCGAATTAGTGAGTTGTCAGATGATATTATTTCAAGCATATTGTCCCTCTTGCCGCTAAAGGAAGCCGAAGCTACTAGTATTCTCTCTAGTCGATGGCGCTATATTTGGGCATTTTCAACTAGGAATCTTTATTTTGATGCTGAAGAATGTCTACGTGCCTTTCCGGCCCTCAGTCGAGAACTGAAGGACCAGAAAAGTCTCAGATATGTTGATGGGTCGATCATGTGGTGGAACAATATAGGGGATCAGGCATCGAACAATTCAGGGAAAGATTCTTATACTTTTCCCCAGAAACTATTAGATCCAAACTACTCTAATGGATGCATCGGTTTTGAGTCGCTCAAAGTTCTTGAATTGAGGAATGTTGATGTGACTGATGAAGTTGTTCAGCACTTCTTGTCCAAATGTCCAGTTCTTGAACGACTATCGATATGTTATGCTACAAATCTGGTCAATTTTAAAGCCGCCGGTCCGTCAATTGCGTTGAAGCATTTGGTGATCAAGAATTGTTTTTCCTTGAAAAGCATTGAGGTTTGTGACACTTCTGGTCTTGTTTCGTTTACTTTTGATGGGTTTGGAGATGAAATAAGTTTGTCACTCTGTAATCTACCACTTCTCGTTAGGATTGATGTATCCATACACTTCTGCGAGTTCCCTCTCATCAGTGGTTCTTTCGGTCGACTCTCACTCTCACGTTCTCTTCCTCAGCTTGAGACCCTAGGTTTAGCGATCCATAGCTCCTATTTGGACTTTAAGCGGTTCAATGATGTGTTTCCAATTCCTACACTGCTACCAAATCTAAAGCATTTGGAATTAGCAGTACTCGAAACAGATGCTCATGGTCTTCGAAAATTATATTCCTTCTTGAAGGCATCTCCTCATTTGCAGAGACTTGTATTACAGTGTGAATTCTCATTTAACGAGCAGCCCTTTGATGAACCATTACAGCAAGCTGGTGAATGCAAACATCATAATCTTAAGGTGGTACAAGTGGTAGGATATCGTGCGAGGAAAATTATTGCCACGTGTGTCAACTACTTGATAGAGAATGTTTTGTCACTTGAGAAGATTGTTATTGATCCTCGTCGACCAGGCTTTCATTATACTGGAATGGGAAAGCGCATTGAAGAGGTGGAGGAGGAAAGGAAGGCAAGAGATCACGCAATGCATCAACTGAAGAAACAAGTGCCTTCAACTATTGAATGTCTATGCAATTATGTAGACCTCGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

434

Amino Acids

49.34

Weight (kDa)

6.21

Isoelectric Point (pI)

45.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 133 - 207 1.3e-06 FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1 PF23622 135 - 425 3.6e-27 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 4 cut(s) 223, 751, 1159, 1293
AciI CCGC 3 cut(s) 125, 537, 829
AclWI GGATC 5 cut(s) 78, 324, 368, 796, 1145
AcsI RAATTY 1 cut(s) 980
AcuI CTGAAG 3 cut(s) 234, 275, 1268
AcvI CACGTG 1 cut(s) 1098
AfaI GTAC 2 cut(s) 894, 1059
AflII CTTAAG 1 cut(s) 1049
AflIII ACRYGT 1 cut(s) 1097
AhlI ACTAGT 1 cut(s) 146
AjnI CCWGG 1 cut(s) 1162
AluBI AGCT 4 cut(s) 143, 781, 810, 1025
AluI AGCT 4 cut(s) 143, 781, 810, 1025
Alw26I GTCTC 3 cut(s) 275, 779, 955
AlwI GGATC 5 cut(s) 78, 324, 368, 796, 1145
Ama87I CYCGRG 1 cut(s) 1298
AoxI GGCC 1 cut(s) 237
ApeKI GCWGC 1 cut(s) 997
ApoI RAATTY 1 cut(s) 980
Asp700I GAANNNNTTC 1 cut(s) 456
AspA2I CCTAGG 1 cut(s) 790
AspLEI GCGC 2 cut(s) 171, 1194
AspS9I GGNCC 3 cut(s) 238, 259, 542
AsuHPI GGTGA 2 cut(s) 580, 1040
AsuII TTCGAA 1 cut(s) 919
AvaI CYCGRG 1 cut(s) 1298
AvaII GGWCC 2 cut(s) 259, 542
AvrII CCTAGG 1 cut(s) 790
BarI GAAGNNNNNNTAC 2 cut(s) 207, 239
BbrPI CACGTG 1 cut(s) 1098
BbsI GAAGAC 1 cut(s) 908
BbvCI CCTCAGC 1 cut(s) 777
BbvI GCAGC 1 cut(s) 1009
BccI CCATC 3 cut(s) 159, 278, 635
BcgI CGANNNNNNTGC 2 cut(s) 887, 921
BciT130I CCWGG 1 cut(s) 1164
BciVI GTATCC 1 cut(s) 715
BclI TGATCA 1 cut(s) 570
BcoDI GTCTC 3 cut(s) 275, 779, 955
BcuI ACTAGT 1 cut(s) 146
BfaI CTAG 4 cut(s) 147, 159, 192, 791
BfoI RGCGCY 1 cut(s) 172
BfrI CTTAAG 1 cut(s) 1049
BfuI GTATCC 1 cut(s) 715
BglI GCCNNNNNGGC 1 cut(s) 236
BisI GCNGC 3 cut(s) 125, 537, 998
BlnI CCTAGG 1 cut(s) 790
BlsI GCNGC 3 cut(s) 126, 538, 999
BmcAI AGTACT 1 cut(s) 894
Bme1390I CCNGG 1 cut(s) 1164
Bme18I GGWCC 2 cut(s) 259, 542
BmeT110I CYCGRG 1 cut(s) 1298
BmgT120I GGNCC 3 cut(s) 238, 259, 542
BmrFI CCNGG 1 cut(s) 1164
BmsI GCATC 7 cut(s) 199, 332, 383, 405, 895, 953, 1249
BpiI GAAGAC 1 cut(s) 908
Bpu10I CCTNAGC 1 cut(s) 777
Bpu14I TTCGAA 1 cut(s) 919
BpuEI CTTGAG 2 cut(s) 803, 1154
Bsa29I ATCGAT 2 cut(s) 50, 500
BsaAI YACGTR 2 cut(s) 227, 1098
BsaI GGTCTC 1 cut(s) 779
BsaJI CCNNGG 1 cut(s) 790
Bse118I RCCGGY 1 cut(s) 539
Bse1I ACTGG 2 cut(s) 482, 1183
Bse3DI GCAATG 1 cut(s) 1242
BseBI CCWGG 1 cut(s) 1164
BseCI ATCGAT 2 cut(s) 50, 500
BseDI CCNNGG 1 cut(s) 790
BseGI GGATG 1 cut(s) 398
BseMI GCAATG 1 cut(s) 1242
BseMII CTCAG 3 cut(s) 256, 286, 791
BseNI ACTGG 2 cut(s) 482, 1183
BseRI GAGGAG 2 cut(s) 939, 1223
BseXI GCAGC 1 cut(s) 1009
Bsh1285I CGRYCG 1 cut(s) 751
BshFI GGCC 1 cut(s) 239
BshVI ATCGAT 2 cut(s) 50, 500
BsiEI CGRYCG 1 cut(s) 751
BsiHKCI CYCGRG 1 cut(s) 1298
BsiSI CCGG 2 cut(s) 236, 540
BslFI GGGAC 1 cut(s) 100
BsmAI GTCTC 3 cut(s) 275, 779, 955
BsmFI GGGAC 1 cut(s) 100
BsmI GAATGC 1 cut(s) 1037
BsnI GGCC 1 cut(s) 239
Bso31I GGTCTC 1 cut(s) 779
BsoBI CYCGRG 1 cut(s) 1298
Bsp119I TTCGAA 1 cut(s) 919
Bsp143I GATC 8 cut(s) 70, 291, 316, 373, 570, 801, 1150, 1228
BspACI CCGC 3 cut(s) 125, 537, 829
BspANI GGCC 1 cut(s) 239
BspCNI CTCAG 3 cut(s) 255, 285, 790
BspDI ATCGAT 2 cut(s) 50, 500
BspPI GGATC 5 cut(s) 78, 324, 368, 796, 1145
BspT104I TTCGAA 1 cut(s) 919
BspTI CTTAAG 1 cut(s) 1049
BspTNI GGTCTC 1 cut(s) 779
BsrDI GCAATG 1 cut(s) 1242
BsrFI RCCGGY 1 cut(s) 539
BsrI ACTGG 2 cut(s) 482, 1183
BssAI RCCGGY 1 cut(s) 539
BssECI CCNNGG 1 cut(s) 790
BssMI GATC 8 cut(s) 70, 291, 316, 373, 570, 801, 1150, 1228
BssT1I CCWWGG 1 cut(s) 790
Bst2UI CCWGG 1 cut(s) 1164
Bst4CI ACNGT 1 cut(s) 975
Bst6I CTCTTC 2 cut(s) 777, 1194
BstAFI CTTAAG 1 cut(s) 1049
BstBAI YACGTR 2 cut(s) 227, 1098
BstBI TTCGAA 1 cut(s) 919
BstC8I GCNNGC 1 cut(s) 1023
BstDEI CTNAG 3 cut(s) 242, 272, 777
BstF5I GGATG 1 cut(s) 398
BstH2I RGCGCY 1 cut(s) 172
BstHHI GCGC 2 cut(s) 171, 1194
BstKTI GATC 8 cut(s) 73, 294, 319, 376, 573, 804, 1153, 1231
BstMAI GTCTC 3 cut(s) 275, 779, 955
BstMBI GATC 8 cut(s) 70, 291, 316, 373, 570, 801, 1150, 1228
BstMCI CGRYCG 1 cut(s) 751
BstMWI GCNNNNNNNGC 1 cut(s) 236
BstNI CCWGG 1 cut(s) 1164
BstSCI CCNGG 1 cut(s) 1162
BstV1I GCAGC 1 cut(s) 1009
BstV2I GAAGAC 1 cut(s) 908
BstX2I RGATCY 1 cut(s) 373
BstYI RGATCY 1 cut(s) 373
Bsu15I ATCGAT 2 cut(s) 50, 500
BsuI GTATCC 1 cut(s) 715
BsuRI GGCC 1 cut(s) 239
BsuTUI ATCGAT 2 cut(s) 50, 500
BtsCI GGATG 1 cut(s) 398
BtsI GCAGTG 1 cut(s) 857
BtsIMutI CAGTG 4 cut(s) 72, 742, 857, 980
Cac8I GCNNGC 1 cut(s) 1023
CfoI GCGC 2 cut(s) 171, 1194
Cfr10I RCCGGY 1 cut(s) 539
Cfr13I GGNCC 3 cut(s) 238, 259, 542
ClaI ATCGAT 2 cut(s) 50, 500
CpoI CGGWCCG 1 cut(s) 542
Csp6I GTAC 2 cut(s) 893, 1058
CspI CGGWCCG 1 cut(s) 542
CviAII CATG 2 cut(s) 295, 911
CviJI RGCY 9 cut(s) 137, 143, 239, 536, 781, 810, 1000, 1025, 1167
CviKI_1 RGCY 9 cut(s) 137, 143, 239, 536, 781, 810, 1000, 1025, 1167
CviQI GTAC 2 cut(s) 893, 1058
DdeI CTNAG 3 cut(s) 242, 272, 777
DpnI GATC 8 cut(s) 72, 293, 318, 375, 572, 803, 1152, 1230
DpnII GATC 8 cut(s) 70, 291, 316, 373, 570, 801, 1150, 1228
DraI TTTAAA 1 cut(s) 532
Eam1104I CTCTTC 2 cut(s) 777, 1194
EarI CTCTTC 2 cut(s) 777, 1194
Eco130I CCWWGG 1 cut(s) 790
Eco31I GGTCTC 1 cut(s) 779
Eco32I GATATC 1 cut(s) 1073
Eco47I GGWCC 2 cut(s) 259, 542
Eco57I CTGAAG 3 cut(s) 234, 275, 1268
Eco72I CACGTG 1 cut(s) 1098
Eco88I CYCGRG 1 cut(s) 1298
EcoRI GAATTC 1 cut(s) 980
EcoRII CCWGG 1 cut(s) 1162
EcoRV GATATC 1 cut(s) 1073
EcoT14I CCWWGG 1 cut(s) 790
EcoT22I ATGCAT 2 cut(s) 398, 1242
ErhI CCWWGG 1 cut(s) 790
FaeI CATG 2 cut(s) 298, 914
FaqI GGGAC 1 cut(s) 100
FatI CATG 2 cut(s) 294, 910
FbaI TGATCA 1 cut(s) 570
FblI GTMKAC 4 cut(s) 223, 751, 1159, 1293
Fnu4HI GCNGC 3 cut(s) 125, 537, 998
FokI GGATG 1 cut(s) 405
Fsp4HI GCNGC 3 cut(s) 125, 537, 998
FspBI CTAG 4 cut(s) 147, 159, 192, 791
GlaI GCGC 2 cut(s) 170, 1193
GluI GCNGC 3 cut(s) 125, 537, 998
HaeII RGCGCY 1 cut(s) 172
HaeIII GGCC 1 cut(s) 239
HapII CCGG 2 cut(s) 236, 540
HhaI GCGC 2 cut(s) 171, 1194
Hin1II CATG 2 cut(s) 298, 914
Hin6I GCGC 2 cut(s) 169, 1192
HinP1I GCGC 2 cut(s) 169, 1192
HincII GTYRAC 3 cut(s) 752, 1105, 1160
HindII GTYRAC 3 cut(s) 752, 1105, 1160
HinfI GANTC 5 cut(s) 62, 196, 344, 407, 753
HpaII CCGG 2 cut(s) 236, 540
HphI GGTGA 2 cut(s) 580, 1040
Hpy166II GTNNAC 6 cut(s) 224, 633, 752, 1105, 1160, 1294
Hpy188I TCNGA 4 cut(s) 21, 28, 91, 275
Hpy188III TCNNGA 5 cut(s) 248, 422, 488, 574, 937
Hpy8I GTNNAC 6 cut(s) 224, 633, 752, 1105, 1160, 1294
Hpy99I CGWCG 1 cut(s) 1161
HpyAV CCTTC 5 cut(s) 250, 934, 943, 1213, 1272
HpyCH4III ACNGT 1 cut(s) 975
HpyCH4IV ACGT 3 cut(s) 226, 766, 1097
HpyCH4V TGCA 5 cut(s) 396, 958, 1035, 1240, 1284
HpyF10VI GCNNNNNNNGC 1 cut(s) 236
HpyF3I CTNAG 3 cut(s) 242, 272, 777
HpySE526I ACGT 3 cut(s) 226, 766, 1097
Hsp92II CATG 2 cut(s) 298, 914
HspAI GCGC 2 cut(s) 169, 1192
Ksp22I TGATCA 1 cut(s) 570
Kzo9I GATC 8 cut(s) 70, 291, 316, 373, 570, 801, 1150, 1228
LmnI GCTCC 1 cut(s) 815
Lsp1109I GCAGC 1 cut(s) 1009
LweI GCATC 7 cut(s) 199, 332, 383, 405, 895, 953, 1249
MaeI CTAG 4 cut(s) 147, 159, 192, 791
MaeII ACGT 3 cut(s) 226, 766, 1097
MaeIII GTNAC 4 cut(s) 442, 608, 666, 1128
MalI GATC 8 cut(s) 72, 293, 318, 375, 572, 803, 1152, 1230
MboI GATC 8 cut(s) 70, 291, 316, 373, 570, 801, 1150, 1228
MboII GAAGA 7 cut(s) 16, 227, 764, 908, 1150, 1211, 1261
MfeI CAATTG 1 cut(s) 549
MflI RGATCY 1 cut(s) 373
MlyI GAGTC 3 cut(s) 71, 416, 747
MmeI TCCRAC 1 cut(s) 44
Mph1103I ATGCAT 2 cut(s) 398, 1242
MroXI GAANNNNTTC 1 cut(s) 456
MseI TTAA 4 cut(s) 531, 825, 990, 1050
MspCI CTTAAG 1 cut(s) 1049
MspI CCGG 2 cut(s) 236, 540
MspR9I CCNGG 1 cut(s) 1164
MunI CAATTG 1 cut(s) 549
Mva1269I GAATGC 1 cut(s) 1037
MvaI CCWGG 1 cut(s) 1164
MwoI GCNNNNNNNGC 1 cut(s) 236
NdeII GATC 8 cut(s) 70, 291, 316, 373, 570, 801, 1150, 1228
NlaIII CATG 2 cut(s) 298, 914
NmuCI GTSAC 4 cut(s) 442, 608, 666, 1128
NsiI ATGCAT 2 cut(s) 398, 1242
NspV TTCGAA 1 cut(s) 919
PaeR7I CTCGAG 1 cut(s) 1298
PctI GAATGC 1 cut(s) 1037
PdmI GAANNNNTTC 1 cut(s) 456
PfeI GAWTC 2 cut(s) 196, 344
PkrI GCNGC 3 cut(s) 126, 538, 999
PleI GAGTC 3 cut(s) 70, 415, 747
PmaCI CACGTG 1 cut(s) 1098
PmlI CACGTG 1 cut(s) 1098
PpsI GAGTC 3 cut(s) 70, 415, 747
Ppu21I YACGTR 2 cut(s) 227, 1098
Psp6I CCWGG 1 cut(s) 1162
PspCI CACGTG 1 cut(s) 1098
PspGI CCWGG 1 cut(s) 1162
PspPI GGNCC 3 cut(s) 238, 259, 542
PspXI VCTCGAGB 1 cut(s) 1298
PsuI RGATCY 1 cut(s) 373
RsaI GTAC 2 cut(s) 894, 1059
RsaNI GTAC 2 cut(s) 893, 1058
Rsr2I CGGWCCG 1 cut(s) 542
RsrII CGGWCCG 1 cut(s) 542
SalI GTCGAC 2 cut(s) 750, 1158
SaqAI TTAA 4 cut(s) 531, 825, 990, 1050
SatI GCNGC 3 cut(s) 125, 537, 998
Sau3AI GATC 8 cut(s) 70, 291, 316, 373, 570, 801, 1150, 1228
Sau96I GGNCC 3 cut(s) 238, 259, 542
ScaI AGTACT 1 cut(s) 894
SchI GAGTC 3 cut(s) 71, 416, 747
ScrFI CCNGG 1 cut(s) 1164
SfaNI GCATC 7 cut(s) 199, 332, 383, 405, 895, 953, 1249
Sfr274I CTCGAG 1 cut(s) 1298
SfuI TTCGAA 1 cut(s) 919
SinI GGWCC 2 cut(s) 259, 542
SlaI CTCGAG 1 cut(s) 1298
SmlI CTYRAG 4 cut(s) 782, 1049, 1133, 1298
SmoI CTYRAG 4 cut(s) 782, 1049, 1133, 1298
SpeI ACTAGT 1 cut(s) 146
SsiI CCGC 3 cut(s) 125, 537, 829
SspMI CTAG 4 cut(s) 147, 159, 192, 791
StyD4I CCNGG 1 cut(s) 1162
StyI CCWWGG 1 cut(s) 790
TaaI ACNGT 1 cut(s) 975
TaiI ACGT 3 cut(s) 229, 769, 1100
TaqII GACCGA 1 cut(s) 737
TatI WGTACW 1 cut(s) 892
TauI GCSGC 2 cut(s) 127, 539
TfiI GAWTC 2 cut(s) 196, 344
Tru1I TTAA 4 cut(s) 531, 825, 990, 1050
Tru9I TTAA 4 cut(s) 531, 825, 990, 1050
TscAI CASTG 4 cut(s) 72, 742, 864, 980
TseFI GTSAC 4 cut(s) 442, 608, 666, 1128
TseI GCWGC 1 cut(s) 997
Tsp45I GTSAC 4 cut(s) 442, 608, 666, 1128
TspDTI ATGAA 5 cut(s) 17, 465, 669, 1023, 1160
TspGWI ACGGA 1 cut(s) 534
TspRI CASTG 4 cut(s) 72, 742, 864, 980
Vha464I CTTAAG 1 cut(s) 1049
VpaK11BI GGWCC 2 cut(s) 259, 542
XapI RAATTY 1 cut(s) 980
XhoI CTCGAG 1 cut(s) 1298
XmaJI CCTAGG 1 cut(s) 790
XmiI GTMKAC 4 cut(s) 223, 751, 1159, 1293
XmnI GAANNNNTTC 1 cut(s) 456
XspI CTAG 4 cut(s) 147, 159, 192, 791
ZrmI AGTACT 1 cut(s) 894
Zsp2I ATGCAT 2 cut(s) 398, 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.