FvH4_1g15880

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000095
Physical Location & Seq
Forward (+)
9034794 .. 9037427
2634 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g15880.t1

Sequence Viewer

Length: 1392 bp
ATGGCTGAACCGAATAGCAAGGGTGGTTACCACATGAAAGAGAGAAAGAAAAAAGACGTTGCTGGCAACATGGAGGACAGAATCAGTGGATTGCCGGATGAAATTCTTGTGAGTATACTCTCTCTATTGTCCCTAAAGGAAGCACAAGCTACTAGTATCCTCTCTAGGAGGTGGCATTATGTGTGGGCCTTTAGTACCACTCTCAACTTCGATGCTGAACAACGATTGATCAGATTTTGCAAGCCCAAAAGTGACAGGGAACGCGAGCTAGGATTGTGTATGTATGTTGATTGGGTGGATTCGGTTTTGAATCAACATAGAGTAGCTAACATTGAGCGCTTCCGAATTGCGTTTGAGCTTGGTCCTAGAAGTTGTATTGATAAATGGATTCAATTTGCAATGAGGAAAGGAGTTCAAATTCTTGAGCTGGACTTATCTGCTATTTTATATCCATGGGGTCTGCAATACAAATTTAGCAACCAAGTGCTGGGTATAAGTGAATTTTCTAGTTTCAAGGCCTTGTGTTCGGAATACATTGGTTTTAAGTTTCTCAAAGTTCTTGATTTCAATCGTGTTGATGTGGACCAAGATATTCTCGAGTACTTCATCTATAACTGTCCAGTTCTTGAACGAGTAGCCGTGTGTGATTCATCCTTGATGGTCAATCTTAGAGTTGTTGGTCAGTCTATTGCATTGAAGTATTTAACGATACAACAATGTCTCAACCTCAAAAGCATCGAGATATGTGAAGCAAACCTAATTTCATTTACTTATGGTGGGGATCTGGAAAAGTTGCTTCTTAGAAATCTACCACTTCTTGTTGAGATATCCCTTTCAGGAATGACAAGAATCACGGGATGGTCGGCAAAGATTGACTTCTCTTACCTTTCTTGCTGTCTTTCCCAACTGGAGATTCTCAAAATCAATTATATAATTTTGTGGGGCGAAACAGATCCTGTAATTCCTTCATTACCTAATCTCAAGTGCTTGGAATTAGCATTTGATGAAGATAATAACTATGCTCTTCTTCATATTGCATTTTTCATTAAGCAAACTCCTTGCTTGCATACTCTTGTAATGAAGTTTCGATCATGGCGGTGTCCGAAAAATCCCTTTGCCAAGAAGAGAGCCGCAAGATACTCTCATGATTGTCTGAAAGTGGTGAAATTCCTAGAATACTCTGGCCTTAGCCGTCAAATTGAACTTGTGAAGTACTTGATGAAAACTGCAAGTAATCTGGAGAAAATTATTTTTGATCCTGTTAATCGTCAGTATTCAGGGGTTCACAGACTGCTATTTCCCCATATAGTGGAGATGGAAGAATTGTCAAGAGCTGAGGCTCATCAGCTTAAAGAAAAATTGCCTGCAACTCTAGATGTTGTGTGCCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

464

Amino Acids

53.47

Weight (kDa)

8.38

Isoelectric Point (pI)

40.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 28 - 62 1.9e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 102 - 425 2.4e-25 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 126 - 359 5.3e-08 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 487, 1309
AccI GTMKAC 1 cut(s) 115
AccII CGCG 1 cut(s) 264
AciI CCGC 2 cut(s) 1096, 1131
AclWI GGATC 3 cut(s) 789, 947, 1250
AcsI RAATTY 5 cut(s) 102, 417, 470, 500, 1166
AfaI GTAC 3 cut(s) 196, 602, 1214
AfeI AGCGCT 1 cut(s) 338
AfiI CCNNNNNNNGG 2 cut(s) 487, 1309
AgsI TTSAA 8 cut(s) 310, 392, 416, 514, 568, 629, 697, 1202
AhlI ACTAGT 1 cut(s) 152
AjuI GAANNNNNNNTTGG 2 cut(s) 897, 929
AluBI AGCT 7 cut(s) 149, 268, 326, 358, 427, 1334, 1348
AluI AGCT 7 cut(s) 149, 268, 326, 358, 427, 1334, 1348
Alw26I GTCTC 1 cut(s) 725
AlwI GGATC 3 cut(s) 789, 947, 1250
AlwNI CAGNNNCTG 1 cut(s) 956
Ama87I CYCGRG 1 cut(s) 596
Aor51HI AGCGCT 1 cut(s) 338
AoxI GGCC 3 cut(s) 186, 516, 1183
ApoI RAATTY 5 cut(s) 102, 417, 470, 500, 1166
AspLEI GCGC 1 cut(s) 339
AspS9I GGNCC 3 cut(s) 186, 362, 583
AsuHPI GGTGA 1 cut(s) 1174
AvaI CYCGRG 1 cut(s) 596
AvaII GGWCC 2 cut(s) 362, 583
BbvCI CCTCAGC 1 cut(s) 1335
BccI CCATC 3 cut(s) 652, 852, 1309
BceAI ACGGC 2 cut(s) 623, 1176
BciVI GTATCC 1 cut(s) 167
BclI TGATCA 1 cut(s) 228
BcoDI GTCTC 1 cut(s) 725
BcuI ACTAGT 1 cut(s) 152
BfaI CTAG 7 cut(s) 153, 165, 269, 366, 507, 1172, 1373
BfoI RGCGCY 1 cut(s) 340
BfuI GTATCC 1 cut(s) 167
BisI GCNGC 1 cut(s) 1131
BlsI GCNGC 1 cut(s) 1132
BmcAI AGTACT 2 cut(s) 602, 1214
Bme18I GGWCC 2 cut(s) 362, 583
BmeT110I CYCGRG 1 cut(s) 596
BmgT120I GGNCC 3 cut(s) 186, 362, 583
BmsI GCATC 2 cut(s) 202, 744
BpmI CTGGAG 2 cut(s) 929, 1259
Bpu10I CCTNAGC 2 cut(s) 1187, 1335
BpuEI CTTGAG 2 cut(s) 443, 965
BsaBI GATNNNNATC 1 cut(s) 567
BsaJI CCNNGG 1 cut(s) 452
Bsc4I CCNNNNNNNGG 2 cut(s) 487, 1309
Bse1I ACTGG 3 cut(s) 620, 912, 1387
Bse3DI GCAATG 1 cut(s) 405
Bse8I GATNNNNATC 1 cut(s) 567
BseDI CCNNGG 1 cut(s) 452
BseGI GGATG 3 cut(s) 103, 650, 863
BseJI GATNNNNATC 1 cut(s) 567
BseLI CCNNNNNNNGG 2 cut(s) 487, 1309
BseMI GCAATG 1 cut(s) 405
BseMII CTCAG 1 cut(s) 1326
BseNI ACTGG 3 cut(s) 620, 912, 1387
BseYI CCCAGC 1 cut(s) 487
Bsh1236I CGCG 1 cut(s) 264
BshFI GGCC 3 cut(s) 188, 518, 1185
BsiHKCI CYCGRG 1 cut(s) 596
BsiSI CCGG 1 cut(s) 95
BslFI GGGAC 1 cut(s) 115
BslI CCNNNNNNNGG 2 cut(s) 487, 1309
BsmAI GTCTC 1 cut(s) 725
BsmFI GGGAC 1 cut(s) 115
BsnI GGCC 3 cut(s) 188, 518, 1185
BsoBI CYCGRG 1 cut(s) 596
Bsp143I GATC 5 cut(s) 228, 781, 952, 1088, 1255
Bsp19I CCATGG 1 cut(s) 452
BspACI CCGC 2 cut(s) 1096, 1131
BspANI GGCC 3 cut(s) 188, 518, 1185
BspCNI CTCAG 1 cut(s) 1327
BspFNI CGCG 1 cut(s) 264
BspHI TCATGA 1 cut(s) 1144
BspPI GGATC 3 cut(s) 789, 947, 1250
BspQI GCTCTTC 1 cut(s) 1029
BsrDI GCAATG 1 cut(s) 405
BsrI ACTGG 3 cut(s) 620, 912, 1387
BssECI CCNNGG 1 cut(s) 452
BssMI GATC 5 cut(s) 228, 781, 952, 1088, 1255
BssNAI GTATAC 1 cut(s) 116
BssT1I CCWWGG 1 cut(s) 452
Bst1107I GTATAC 1 cut(s) 116
Bst4CI ACNGT 1 cut(s) 617
Bst6I CTCTTC 2 cut(s) 1029, 1118
BstC8I GCNNGC 5 cut(s) 64, 242, 266, 1064, 1365
BstDEI CTNAG 4 cut(s) 668, 800, 1187, 1335
BstDSI CCRYGG 1 cut(s) 452
BstEII GGTNACC 1 cut(s) 26
BstF5I GGATG 3 cut(s) 103, 650, 863
BstFNI CGCG 1 cut(s) 264
BstH2I RGCGCY 1 cut(s) 340
BstHHI GCGC 1 cut(s) 339
BstKTI GATC 5 cut(s) 231, 784, 955, 1091, 1258
BstMAI GTCTC 1 cut(s) 725
BstMBI GATC 5 cut(s) 228, 781, 952, 1088, 1255
BstPI GGTNACC 1 cut(s) 26
BstUI CGCG 1 cut(s) 264
BstX2I RGATCY 2 cut(s) 781, 952
BstYI RGATCY 2 cut(s) 781, 952
BstZ17I GTATAC 1 cut(s) 116
BsuI GTATCC 1 cut(s) 167
BsuRI GGCC 3 cut(s) 188, 518, 1185
BtgI CCRYGG 1 cut(s) 452
BtsCI GGATG 3 cut(s) 103, 650, 863
BtsIMutI CAGTG 1 cut(s) 91
Cac8I GCNNGC 5 cut(s) 64, 242, 266, 1064, 1365
CaiI CAGNNNCTG 1 cut(s) 956
CciI TCATGA 1 cut(s) 1144
CfoI GCGC 1 cut(s) 339
Cfr13I GGNCC 3 cut(s) 186, 362, 583
Csp6I GTAC 3 cut(s) 195, 601, 1213
CviAII CATG 5 cut(s) 34, 70, 453, 1092, 1145
CviQI GTAC 3 cut(s) 195, 601, 1213
DdeI CTNAG 4 cut(s) 668, 800, 1187, 1335
DpnI GATC 5 cut(s) 230, 783, 954, 1090, 1257
DpnII GATC 5 cut(s) 228, 781, 952, 1088, 1255
Eam1104I CTCTTC 2 cut(s) 1029, 1118
EarI CTCTTC 2 cut(s) 1029, 1118
Eco130I CCWWGG 1 cut(s) 452
Eco147I AGGCCT 1 cut(s) 518
Eco32I GATATC 1 cut(s) 828
Eco47I GGWCC 2 cut(s) 362, 583
Eco47III AGCGCT 1 cut(s) 338
Eco88I CYCGRG 1 cut(s) 596
Eco91I GGTNACC 1 cut(s) 26
EcoO65I GGTNACC 1 cut(s) 26
EcoRV GATATC 1 cut(s) 828
EcoT14I CCWWGG 1 cut(s) 452
ErhI CCWWGG 1 cut(s) 452
FaeI CATG 5 cut(s) 37, 73, 456, 1095, 1148
FalI AAGNNNNNCTT 2 cut(s) 860, 892
FaqI GGGAC 1 cut(s) 115
FatI CATG 5 cut(s) 33, 69, 452, 1091, 1144
FbaI TGATCA 1 cut(s) 228
FblI GTMKAC 1 cut(s) 115
Fnu4HI GCNGC 1 cut(s) 1131
FokI GGATG 3 cut(s) 110, 637, 870
Fsp4HI GCNGC 1 cut(s) 1131
FspBI CTAG 7 cut(s) 153, 165, 269, 366, 507, 1172, 1373
GlaI GCGC 1 cut(s) 338
GluI GCNGC 1 cut(s) 1131
GsaI CCCAGC 1 cut(s) 491
GsuI CTGGAG 2 cut(s) 929, 1259
HaeII RGCGCY 1 cut(s) 340
HaeIII GGCC 3 cut(s) 188, 518, 1185
HapII CCGG 1 cut(s) 95
HhaI GCGC 1 cut(s) 339
Hin1II CATG 5 cut(s) 37, 73, 456, 1095, 1148
Hin6I GCGC 1 cut(s) 337
HinP1I GCGC 1 cut(s) 337
HinfI GANTC 7 cut(s) 81, 299, 310, 388, 647, 849, 913
HpaII CCGG 1 cut(s) 95
HphI GGTGA 1 cut(s) 1174
Hpy166II GTNNAC 3 cut(s) 116, 583, 1285
Hpy188I TCNGA 5 cut(s) 233, 344, 529, 1104, 1155
Hpy8I GTNNAC 3 cut(s) 116, 583, 1285
HpyAV CCTTC 1 cut(s) 975
HpyCH4III ACNGT 1 cut(s) 617
HpyCH4IV ACGT 1 cut(s) 57
HpyCH4V TGCA 8 cut(s) 240, 398, 463, 692, 1037, 1066, 1229, 1367
HpyF3I CTNAG 4 cut(s) 668, 800, 1187, 1335
HpySE526I ACGT 1 cut(s) 57
Hsp92II CATG 5 cut(s) 37, 73, 456, 1095, 1148
HspAI GCGC 1 cut(s) 337
Ksp22I TGATCA 1 cut(s) 228
Kzo9I GATC 5 cut(s) 228, 781, 952, 1088, 1255
LguI GCTCTTC 1 cut(s) 1029
LweI GCATC 2 cut(s) 202, 744
MaeI CTAG 7 cut(s) 153, 165, 269, 366, 507, 1172, 1373
MaeII ACGT 1 cut(s) 57
MaeIII GTNAC 2 cut(s) 26, 251
MalI GATC 5 cut(s) 230, 783, 954, 1090, 1257
MboI GATC 5 cut(s) 228, 781, 952, 1088, 1255
MboII GAAGA 5 cut(s) 1016, 1019, 1019, 1135, 1331
MflI RGATCY 2 cut(s) 781, 952
MnlI CCTC 6 cut(s) 67, 162, 170, 396, 737, 1330
MseI TTAA 5 cut(s) 543, 704, 1047, 1263, 1350
MslI CAYNNNNRTG 1 cut(s) 1096
MspI CCGG 1 cut(s) 95
MvnI CGCG 1 cut(s) 264
NcoI CCATGG 1 cut(s) 452
NdeII GATC 5 cut(s) 228, 781, 952, 1088, 1255
NlaIII CATG 5 cut(s) 37, 73, 456, 1095, 1148
NmuCI GTSAC 1 cut(s) 251
PaeR7I CTCGAG 1 cut(s) 596
PagI TCATGA 1 cut(s) 1144
PceI AGGCCT 1 cut(s) 518
PciSI GCTCTTC 1 cut(s) 1029
PfeI GAWTC 7 cut(s) 81, 299, 310, 388, 647, 849, 913
PflMI CCANNNNNTGG 2 cut(s) 487, 1309
PkrI GCNGC 1 cut(s) 1132
PspEI GGTNACC 1 cut(s) 26
PspFI CCCAGC 1 cut(s) 487
PspPI GGNCC 3 cut(s) 186, 362, 583
PstNI CAGNNNCTG 1 cut(s) 956
PsuI RGATCY 2 cut(s) 781, 952
RsaI GTAC 3 cut(s) 196, 602, 1214
RsaNI GTAC 3 cut(s) 195, 601, 1213
RseI CAYNNNNRTG 1 cut(s) 1096
SapI GCTCTTC 1 cut(s) 1029
SaqAI TTAA 5 cut(s) 543, 704, 1047, 1263, 1350
SatI GCNGC 1 cut(s) 1131
Sau3AI GATC 5 cut(s) 228, 781, 952, 1088, 1255
Sau96I GGNCC 3 cut(s) 186, 362, 583
ScaI AGTACT 2 cut(s) 602, 1214
SfaNI GCATC 2 cut(s) 202, 744
Sfr274I CTCGAG 1 cut(s) 596
SinI GGWCC 2 cut(s) 362, 583
SlaI CTCGAG 1 cut(s) 596
SmiMI CAYNNNNRTG 1 cut(s) 1096
SmlI CTYRAG 3 cut(s) 422, 596, 980
SmoI CTYRAG 3 cut(s) 422, 596, 980
SpeI ACTAGT 1 cut(s) 152
SseBI AGGCCT 1 cut(s) 518
SsiI CCGC 2 cut(s) 1096, 1131
SspMI CTAG 7 cut(s) 153, 165, 269, 366, 507, 1172, 1373
StuI AGGCCT 1 cut(s) 518
StyI CCWWGG 1 cut(s) 452
TaaI ACNGT 1 cut(s) 617
TaiI ACGT 1 cut(s) 60
TaqI TCGA 4 cut(s) 210, 597, 738, 1087
TatI WGTACW 2 cut(s) 600, 1212
TauI GCSGC 1 cut(s) 1133
TfiI GAWTC 7 cut(s) 81, 299, 310, 388, 647, 849, 913
Tru1I TTAA 5 cut(s) 543, 704, 1047, 1263, 1350
Tru9I TTAA 5 cut(s) 543, 704, 1047, 1263, 1350
TscAI CASTG 1 cut(s) 91
TseFI GTSAC 1 cut(s) 251
Tsp45I GTSAC 1 cut(s) 251
TspRI CASTG 1 cut(s) 91
Van91I CCANNNNNTGG 2 cut(s) 487, 1309
VpaK11BI GGWCC 2 cut(s) 362, 583
XapI RAATTY 5 cut(s) 102, 417, 470, 500, 1166
XbaI TCTAGA 1 cut(s) 1372
XhoI CTCGAG 1 cut(s) 596
XmiI GTMKAC 1 cut(s) 115
XspI CTAG 7 cut(s) 153, 165, 269, 366, 507, 1172, 1373
ZrmI AGTACT 2 cut(s) 602, 1214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.