RchiOBHm_Chr7g0184471

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000095
Physical Location & Seq
Forward (+)
4994131 .. 4995387
1257 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16459

Sequence Viewer

Length: 1257 bp
ATGTGGGCATTTTCAACTAGGAATCTTTATTTTGATGCTGATGAATGTCTACGTCACTTTCCGACCCTCAGTCGAGAACTGAGAGACCAGAAAAGTCGCAGATATGTTGATTGGGTCGATCATGTGGTGGAACAACATAGGGGATCAAGCATTGAACAATTTAGGGTTTGCTTTTGTTTAAATAGTCGTTTTGCAAGTTCCCTTGATAAATGGATTGAGTTTGCACTGGAAAAGAGGGCTCAGGTCCTTGTTTTGGAGCTCTTGCCGCCAAGTGATGAGTGTTTTAGGAAAGAGTCTTATGCTTTTCCCCAGAAACTATTAGATCTAAACTACTCTAATGGACGCATTGGTTTTGAGTCGCTCAAAGTTCTTGAATTGACTAATGTCGATGTGACTGATGAAGTTGTTCAGCAATTCTTGTCCAAATGTCCAGTTCTTGAACGATTATCCATATATTATGCTAGAAATCTGGTCAATTTTAAAGCCGCCGGTCAGTCAATTGCGTTGAAGCATTTGGTGATCAAGCATTGTTTTGCCTTGAAAAGCATTGAGGTTTGTGACGTAGCTGGTCTCATTTCGTTTACTTTTGCGGGTTATGGAGATGAAGTAAGTTTGTTATTCTTTAATGTACCACTTCTCGTTGGGATCCATGCATGCATATACATTCACAAGTTCCCTCTCATCCGTGGTTCTTTTGGCCAACTCTCACTCTCTAGTTGTCTTCCTCAGCTAGAGACCCTAGGGTTGTCGATCAGTAGTCACTTATATTTTGACTTTGAGCGGCTGAATGACATGTTTCCAATTCCTACATTGCTACCAAATCTAAAGCATTTGCAACTAGCAGTACTCGAAACAGATGCTTATGGTCTTCAAAAATTATCTTCTTTCTTGAAGGCATCTCCTCATTTGCAGATACTTGTATTACAGTGTATATTCTCATCTACCGAGCCGCCCTTTGAAGAACAATTAGGGCAAGCTGGTGAATGCAAACATCATAATCTTAAGGTGGTACAAGTGGTAGGGTATCGGGCGAGAAAAACTATTGCCCCGTATGTCAACTACTTGATAGAGAATGTTTTATCACTTGAGAAGATTGTTATTGATCCTCGTCGACGGGAATTTCATAATACTGGAATGGACAAGCGTATTGAAGAGGTGGAGGAGGAAAGGAAGGCAAGAGATCACGCAATGCATCAACTGAAGAAACAAGTTCCTTCAACTATTGAATGTGTATGTAATTATGTAGATGTCGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

418

Amino Acids

48.1

Weight (kDa)

6.44

Isoelectric Point (pI)

51.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 43 - 409 5.6e-30 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 111 - 185 5.2e-07 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 781
AccI GTMKAC 2 cut(s) 49, 1111
AciI CCGC 5 cut(s) 266, 486, 590, 781, 950
AclWI GGATC 4 cut(s) 151, 640, 653, 1097
AcoI YGGCCR 1 cut(s) 697
AcsI RAATTY 1 cut(s) 1118
AcuI CTGAAG 1 cut(s) 1220
AfaI GTAC 3 cut(s) 630, 846, 1011
AfiI CCNNNNNNNGG 1 cut(s) 253
AflII CTTAAG 1 cut(s) 1001
AflIII ACRYGT 1 cut(s) 792
AhdI GACNNNNNGTC 1 cut(s) 69
AluBI AGCT 4 cut(s) 259, 566, 730, 977
AluI AGCT 4 cut(s) 259, 566, 730, 977
Alw21I GWGCWC 1 cut(s) 261
Alw26I GTCTC 3 cut(s) 78, 575, 728
AlwI GGATC 4 cut(s) 151, 640, 653, 1097
AoxI GGCC 1 cut(s) 697
ApoI RAATTY 1 cut(s) 1118
Asp700I GAANNNNTTC 1 cut(s) 405
AspA2I CCTAGG 1 cut(s) 739
AspS9I GGNCC 1 cut(s) 244
AsuHPI GGTGA 2 cut(s) 529, 992
AvaII GGWCC 1 cut(s) 244
AvrII CCTAGG 1 cut(s) 739
BalI TGGCCA 1 cut(s) 699
BamHI GGATCC 1 cut(s) 645
BanII GRGCYC 2 cut(s) 241, 261
BbsI GAAGAC 2 cut(s) 713, 860
Bbv12I GWGCWC 1 cut(s) 261
BbvCI CCTCAGC 1 cut(s) 726
BcgI CGANNNNNNTGC 2 cut(s) 839, 873
BclI TGATCA 1 cut(s) 519
BcoDI GTCTC 3 cut(s) 78, 575, 728
BfaI CTAG 6 cut(s) 18, 462, 714, 731, 740, 839
BfrI CTTAAG 1 cut(s) 1001
BglII AGATCT 1 cut(s) 322
BisI GCNGC 4 cut(s) 266, 486, 782, 950
BlnI CCTAGG 1 cut(s) 739
BlsI GCNGC 4 cut(s) 267, 487, 783, 951
BmcAI AGTACT 1 cut(s) 846
Bme18I GGWCC 1 cut(s) 244
BmeRI GACNNNNNGTC 1 cut(s) 69
BmgT120I GGNCC 1 cut(s) 244
BmiI GGNNCC 1 cut(s) 647
BmsI GCATC 4 cut(s) 25, 847, 905, 1201
BoxI GACNNNNGTC 1 cut(s) 383
BpiI GAAGAC 2 cut(s) 713, 860
Bpu10I CCTNAGC 2 cut(s) 240, 726
BpuEI CTTGAG 1 cut(s) 1106
BsaI GGTCTC 3 cut(s) 78, 575, 728
BsaJI CCNNGG 2 cut(s) 685, 739
BsaXI ACNNNNNCTCC 2 cut(s) 591, 621
Bsc4I CCNNNNNNNGG 1 cut(s) 253
Bse118I RCCGGY 1 cut(s) 488
Bse1I ACTGG 3 cut(s) 231, 431, 1135
Bse3DI GCAATG 2 cut(s) 809, 1194
BseDI CCNNGG 2 cut(s) 685, 739
BseGI GGATG 1 cut(s) 681
BseLI CCNNNNNNNGG 1 cut(s) 253
BseMI GCAATG 2 cut(s) 809, 1194
BseMII CTCAG 4 cut(s) 71, 82, 254, 740
BseNI ACTGG 3 cut(s) 231, 431, 1135
BseRI GAGGAG 2 cut(s) 891, 1175
BshFI GGCC 1 cut(s) 699
BsiHKAI GWGCWC 1 cut(s) 261
BsiSI CCGG 1 cut(s) 489
BslI CCNNNNNNNGG 1 cut(s) 253
BsmAI GTCTC 3 cut(s) 78, 575, 728
BsmI GAATGC 1 cut(s) 989
BsnI GGCC 1 cut(s) 699
Bso31I GGTCTC 3 cut(s) 78, 575, 728
Bsp1286I GDGCHC 2 cut(s) 241, 261
Bsp143I GATC 8 cut(s) 118, 143, 322, 519, 645, 750, 1102, 1180
BspACI CCGC 5 cut(s) 266, 486, 590, 781, 950
BspANI GGCC 1 cut(s) 699
BspCNI CTCAG 4 cut(s) 72, 81, 253, 739
BspLI GGNNCC 1 cut(s) 647
BspPI GGATC 4 cut(s) 151, 640, 653, 1097
BspTI CTTAAG 1 cut(s) 1001
BspTNI GGTCTC 3 cut(s) 78, 575, 728
BsrBI CCGCTC 1 cut(s) 781
BsrDI GCAATG 2 cut(s) 809, 1194
BsrFI RCCGGY 1 cut(s) 488
BsrI ACTGG 3 cut(s) 231, 431, 1135
BssAI RCCGGY 1 cut(s) 488
BssECI CCNNGG 2 cut(s) 685, 739
BssMI GATC 8 cut(s) 118, 143, 322, 519, 645, 750, 1102, 1180
BssT1I CCWWGG 1 cut(s) 739
Bst4CI ACNGT 1 cut(s) 927
Bst6I CTCTTC 1 cut(s) 1146
BstAFI CTTAAG 1 cut(s) 1001
BstC8I GCNNGC 2 cut(s) 655, 975
BstDEI CTNAG 4 cut(s) 68, 80, 240, 726
BstDSI CCRYGG 1 cut(s) 685
BstF5I GGATG 1 cut(s) 681
BstKTI GATC 8 cut(s) 121, 146, 325, 522, 648, 753, 1105, 1183
BstMAI GTCTC 3 cut(s) 78, 575, 728
BstMBI GATC 8 cut(s) 118, 143, 322, 519, 645, 750, 1102, 1180
BstMWI GCNNNNNNNGC 1 cut(s) 265
BstNSI RCATGY 2 cut(s) 657, 796
BstPAI GACNNNNGTC 1 cut(s) 383
BstV2I GAAGAC 2 cut(s) 713, 860
BstX2I RGATCY 2 cut(s) 322, 645
BstYI RGATCY 2 cut(s) 322, 645
BsuRI GGCC 1 cut(s) 699
BtgI CCRYGG 1 cut(s) 685
BtsCI GGATG 1 cut(s) 681
BtsIMutI CAGTG 2 cut(s) 224, 932
Cac8I GCNNGC 2 cut(s) 655, 975
Cfr10I RCCGGY 1 cut(s) 488
Cfr13I GGNCC 1 cut(s) 244
CseI GACGC 1 cut(s) 351
Csp6I GTAC 3 cut(s) 629, 845, 1010
CviAII CATG 4 cut(s) 122, 650, 654, 793
CviJI RGCY 9 cut(s) 239, 259, 485, 566, 699, 730, 784, 949, 977
CviKI_1 RGCY 9 cut(s) 239, 259, 485, 566, 699, 730, 784, 949, 977
CviQI GTAC 3 cut(s) 629, 845, 1010
DdeI CTNAG 4 cut(s) 68, 80, 240, 726
DpnI GATC 8 cut(s) 120, 145, 324, 521, 647, 752, 1104, 1182
DpnII GATC 8 cut(s) 118, 143, 322, 519, 645, 750, 1102, 1180
DraI TTTAAA 2 cut(s) 180, 481
DriI GACNNNNNGTC 1 cut(s) 69
EaeI YGGCCR 1 cut(s) 697
Eam1104I CTCTTC 1 cut(s) 1146
Eam1105I GACNNNNNGTC 1 cut(s) 69
EarI CTCTTC 1 cut(s) 1146
Ecl136II GAGCTC 1 cut(s) 259
Eco130I CCWWGG 1 cut(s) 739
Eco24I GRGCYC 2 cut(s) 241, 261
Eco31I GGTCTC 3 cut(s) 78, 575, 728
Eco47I GGWCC 1 cut(s) 244
Eco53kI GAGCTC 1 cut(s) 259
Eco57I CTGAAG 1 cut(s) 1220
EcoICRI GAGCTC 1 cut(s) 259
EcoO109I RGGNCCY 1 cut(s) 244
EcoT14I CCWWGG 1 cut(s) 739
EcoT22I ATGCAT 3 cut(s) 655, 659, 1194
EcoT38I GRGCYC 2 cut(s) 241, 261
ErhI CCWWGG 1 cut(s) 739
FaeI CATG 4 cut(s) 125, 653, 657, 796
FatI CATG 4 cut(s) 121, 649, 653, 792
FauI CCCGC 1 cut(s) 583
FbaI TGATCA 1 cut(s) 519
FblI GTMKAC 2 cut(s) 49, 1111
Fnu4HI GCNGC 4 cut(s) 266, 486, 782, 950
FokI GGATG 1 cut(s) 668
FriOI GRGCYC 2 cut(s) 241, 261
Fsp4HI GCNGC 4 cut(s) 266, 486, 782, 950
FspBI CTAG 6 cut(s) 18, 462, 714, 731, 740, 839
GluI GCNGC 4 cut(s) 266, 486, 782, 950
HaeIII GGCC 1 cut(s) 699
HapII CCGG 1 cut(s) 489
HgaI GACGC 1 cut(s) 351
Hin1II CATG 4 cut(s) 125, 653, 657, 796
HincII GTYRAC 2 cut(s) 1057, 1112
HindII GTYRAC 2 cut(s) 1057, 1112
HinfI GANTC 3 cut(s) 22, 293, 356
HpaII CCGG 1 cut(s) 489
HphI GGTGA 2 cut(s) 529, 992
Hpy166II GTNNAC 4 cut(s) 50, 582, 1057, 1112
Hpy188I TCNGA 1 cut(s) 63
Hpy188III TCNNGA 4 cut(s) 74, 371, 437, 889
Hpy8I GTNNAC 4 cut(s) 50, 582, 1057, 1112
Hpy99I CGWCG 2 cut(s) 1113, 1116
HpyAV CCTTC 3 cut(s) 886, 1165, 1224
HpyCH4III ACNGT 1 cut(s) 927
HpyCH4IV ACGT 2 cut(s) 52, 561
HpyCH4V TGCA 8 cut(s) 194, 224, 653, 657, 835, 910, 987, 1192
HpyF10VI GCNNNNNNNGC 1 cut(s) 265
HpyF3I CTNAG 4 cut(s) 68, 80, 240, 726
HpySE526I ACGT 2 cut(s) 52, 561
Hsp92II CATG 4 cut(s) 125, 653, 657, 796
Ksp22I TGATCA 1 cut(s) 519
Kzo9I GATC 8 cut(s) 118, 143, 322, 519, 645, 750, 1102, 1180
LmnI GCTCC 1 cut(s) 256
LweI GCATC 4 cut(s) 25, 847, 905, 1201
MaeI CTAG 6 cut(s) 18, 462, 714, 731, 740, 839
MaeII ACGT 2 cut(s) 52, 561
MaeIII GTNAC 4 cut(s) 53, 391, 557, 758
MalI GATC 8 cut(s) 120, 145, 324, 521, 647, 752, 1104, 1182
MbiI CCGCTC 1 cut(s) 781
MboI GATC 8 cut(s) 118, 143, 322, 519, 645, 750, 1102, 1180
MboII GAAGA 7 cut(s) 713, 860, 873, 971, 1102, 1163, 1213
MfeI CAATTG 1 cut(s) 498
MflI RGATCY 2 cut(s) 322, 645
MhlI GDGCHC 2 cut(s) 241, 261
MlsI TGGCCA 1 cut(s) 699
MluNI TGGCCA 1 cut(s) 699
MlyI GAGTC 2 cut(s) 302, 365
MmeI TCCRAC 1 cut(s) 86
Mox20I TGGCCA 1 cut(s) 699
Mph1103I ATGCAT 3 cut(s) 655, 659, 1194
MroXI GAANNNNTTC 1 cut(s) 405
MscI TGGCCA 1 cut(s) 699
MseI TTAA 4 cut(s) 179, 480, 624, 1002
Msp20I TGGCCA 1 cut(s) 699
MspCI CTTAAG 1 cut(s) 1001
MspI CCGG 1 cut(s) 489
MunI CAATTG 1 cut(s) 498
Mva1269I GAATGC 1 cut(s) 989
MwoI GCNNNNNNNGC 1 cut(s) 265
NdeII GATC 8 cut(s) 118, 143, 322, 519, 645, 750, 1102, 1180
NlaIII CATG 4 cut(s) 125, 653, 657, 796
NlaIV GGNNCC 1 cut(s) 647
NmuCI GTSAC 4 cut(s) 53, 391, 557, 758
NsiI ATGCAT 3 cut(s) 655, 659, 1194
NspI RCATGY 2 cut(s) 657, 796
PaeI GCATGC 1 cut(s) 657
PciI ACATGT 1 cut(s) 792
PctI GAATGC 1 cut(s) 989
PdmI GAANNNNTTC 1 cut(s) 405
PfeI GAWTC 1 cut(s) 22
PkrI GCNGC 4 cut(s) 267, 487, 783, 951
PleI GAGTC 2 cut(s) 301, 364
PpsI GAGTC 2 cut(s) 301, 364
PpuMI RGGWCCY 1 cut(s) 244
PscI ACATGT 1 cut(s) 792
PshAI GACNNNNGTC 1 cut(s) 383
Psp124BI GAGCTC 1 cut(s) 261
Psp5II RGGWCCY 1 cut(s) 244
PspN4I GGNNCC 1 cut(s) 647
PspPI GGNCC 1 cut(s) 244
PspPPI RGGWCCY 1 cut(s) 244
PsuI RGATCY 2 cut(s) 322, 645
RsaI GTAC 3 cut(s) 630, 846, 1011
RsaNI GTAC 3 cut(s) 629, 845, 1010
SacI GAGCTC 1 cut(s) 261
SalI GTCGAC 1 cut(s) 1110
SaqAI TTAA 4 cut(s) 179, 480, 624, 1002
SatI GCNGC 4 cut(s) 266, 486, 782, 950
Sau3AI GATC 8 cut(s) 118, 143, 322, 519, 645, 750, 1102, 1180
Sau96I GGNCC 1 cut(s) 244
ScaI AGTACT 1 cut(s) 846
SchI GAGTC 2 cut(s) 302, 365
SduI GDGCHC 2 cut(s) 241, 261
SfaNI GCATC 4 cut(s) 25, 847, 905, 1201
SgrDI CGTCGACG 1 cut(s) 1110
SinI GGWCC 1 cut(s) 244
SmlI CTYRAG 2 cut(s) 1001, 1085
SmoI CTYRAG 2 cut(s) 1001, 1085
SphI GCATGC 1 cut(s) 657
SsiI CCGC 5 cut(s) 266, 486, 590, 781, 950
SspMI CTAG 6 cut(s) 18, 462, 714, 731, 740, 839
SstI GAGCTC 1 cut(s) 261
StyI CCWWGG 1 cut(s) 739
TaaI ACNGT 1 cut(s) 927
TaiI ACGT 2 cut(s) 55, 564
TaqI TCGA 7 cut(s) 73, 117, 387, 749, 849, 1111, 1251
TatI WGTACW 1 cut(s) 844
TauI GCSGC 4 cut(s) 268, 488, 784, 952
TfiI GAWTC 1 cut(s) 22
Tru1I TTAA 4 cut(s) 179, 480, 624, 1002
Tru9I TTAA 4 cut(s) 179, 480, 624, 1002
TscAI CASTG 2 cut(s) 231, 932
TseFI GTSAC 4 cut(s) 53, 391, 557, 758
Tsp45I GTSAC 4 cut(s) 53, 391, 557, 758
TspDTI ATGAA 4 cut(s) 57, 414, 618, 1112
TspGWI ACGGA 1 cut(s) 674
TspRI CASTG 2 cut(s) 231, 932
Vha464I CTTAAG 1 cut(s) 1001
VpaK11BI GGWCC 1 cut(s) 244
XapI RAATTY 1 cut(s) 1118
XceI RCATGY 2 cut(s) 657, 796
XmaJI CCTAGG 1 cut(s) 739
XmiI GTMKAC 2 cut(s) 49, 1111
XmnI GAANNNNTTC 1 cut(s) 405
XspI CTAG 6 cut(s) 18, 462, 714, 731, 740, 839
ZrmI AGTACT 1 cut(s) 846
Zsp2I ATGCAT 3 cut(s) 655, 659, 1194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.