LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| F-box | PF00646 | 42 - 79 | 2.2e-08 | F-box domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 17 |
| AccB1I | GGYRCC | 1 cut(s) | 34 |
| AccI | GTMKAC | 2 cut(s) | 43, 356 |
| AciI | CCGC | 2 cut(s) | 31, 211 |
| AcoI | YGGCCR | 1 cut(s) | 54 |
| AcsI | RAATTY | 1 cut(s) | 144 |
| AgsI | TTSAA | 4 cut(s) | 70, 349, 414, 461 |
| AjnI | CCWGG | 1 cut(s) | 56 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 221, 253 |
| AluBI | AGCT | 1 cut(s) | 100 |
| AluI | AGCT | 1 cut(s) | 100 |
| Ama87I | CYCGRG | 1 cut(s) | 297 |
| AoxI | GGCC | 2 cut(s) | 54, 361 |
| ApoI | RAATTY | 1 cut(s) | 144 |
| AseI | ATTAAT | 1 cut(s) | 63 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 377, 432 |
| AspA2I | CCTAGG | 1 cut(s) | 590 |
| AspLEI | GCGC | 1 cut(s) | 131 |
| AspS9I | GGNCC | 1 cut(s) | 118 |
| AsuC2I | CCSGG | 2 cut(s) | 298, 299 |
| AvaI | CYCGRG | 1 cut(s) | 297 |
| AvaII | GGWCC | 1 cut(s) | 118 |
| AvrII | CCTAGG | 1 cut(s) | 590 |
| BanI | GGYRCC | 1 cut(s) | 34 |
| BceAI | ACGGC | 1 cut(s) | 486 |
| BciT130I | CCWGG | 1 cut(s) | 58 |
| BciVI | GTATCC | 3 cut(s) | 209, 331, 522 |
| BcnI | CCSGG | 2 cut(s) | 298, 299 |
| BfaI | CTAG | 3 cut(s) | 176, 207, 591 |
| BfoI | RGCGCY | 1 cut(s) | 132 |
| BfuI | GTATCC | 3 cut(s) | 209, 331, 522 |
| BlnI | CCTAGG | 1 cut(s) | 590 |
| Bme1390I | CCNGG | 3 cut(s) | 58, 298, 299 |
| Bme18I | GGWCC | 1 cut(s) | 118 |
| BmeT110I | CYCGRG | 1 cut(s) | 297 |
| BmgT120I | GGNCC | 1 cut(s) | 118 |
| BmiI | GGNNCC | 1 cut(s) | 36 |
| BmrFI | CCNGG | 3 cut(s) | 58, 298, 299 |
| BmsI | GCATC | 3 cut(s) | 256, 302, 555 |
| BpuEI | CTTGAG | 3 cut(s) | 94, 122, 488 |
| BpuMI | CCSGG | 2 cut(s) | 298, 299 |
| BsaJI | CCNNGG | 3 cut(s) | 297, 532, 590 |
| Bse1I | ACTGG | 1 cut(s) | 352 |
| Bse3DI | GCAATG | 1 cut(s) | 450 |
| BseBI | CCWGG | 1 cut(s) | 58 |
| BseDI | CCNNGG | 3 cut(s) | 297, 532, 590 |
| BseGI | GGATG | 1 cut(s) | 293 |
| BseMI | GCAATG | 1 cut(s) | 450 |
| BseMII | CTCAG | 1 cut(s) | 261 |
| BseNI | ACTGG | 1 cut(s) | 352 |
| BshFI | GGCC | 2 cut(s) | 56, 363 |
| BshNI | GGYRCC | 1 cut(s) | 34 |
| BsiHKCI | CYCGRG | 1 cut(s) | 297 |
| BsiSI | CCGG | 2 cut(s) | 53, 298 |
| BsnI | GGCC | 2 cut(s) | 56, 363 |
| BsoBI | CYCGRG | 1 cut(s) | 297 |
| BspACI | CCGC | 2 cut(s) | 31, 211 |
| BspANI | GGCC | 2 cut(s) | 56, 363 |
| BspCNI | CTCAG | 1 cut(s) | 262 |
| BspLI | GGNNCC | 1 cut(s) | 36 |
| BspT107I | GGYRCC | 1 cut(s) | 34 |
| BsrDI | GCAATG | 1 cut(s) | 450 |
| BsrI | ACTGG | 1 cut(s) | 352 |
| BssECI | CCNNGG | 3 cut(s) | 297, 532, 590 |
| BssNAI | GTATAC | 1 cut(s) | 357 |
| BssT1I | CCWWGG | 1 cut(s) | 590 |
| Bst1107I | GTATAC | 1 cut(s) | 357 |
| Bst2UI | CCWGG | 1 cut(s) | 58 |
| Bst4CI | ACNGT | 2 cut(s) | 343, 409 |
| Bst6I | CTCTTC | 1 cut(s) | 297 |
| BstDEI | CTNAG | 1 cut(s) | 270 |
| BstDSI | CCRYGG | 1 cut(s) | 532 |
| BstF5I | GGATG | 1 cut(s) | 293 |
| BstH2I | RGCGCY | 1 cut(s) | 132 |
| BstHHI | GCGC | 1 cut(s) | 131 |
| BstNI | CCWGG | 1 cut(s) | 58 |
| BstSCI | CCNGG | 3 cut(s) | 56, 296, 297 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 115 |
| BstZ17I | GTATAC | 1 cut(s) | 357 |
| BsuI | GTATCC | 3 cut(s) | 209, 331, 522 |
| BsuRI | GGCC | 2 cut(s) | 56, 363 |
| BtgI | CCRYGG | 1 cut(s) | 532 |
| BtsCI | GGATG | 1 cut(s) | 293 |
| BtsIMutI | CAGTG | 1 cut(s) | 348 |
| CfoI | GCGC | 1 cut(s) | 131 |
| Cfr13I | GGNCC | 1 cut(s) | 118 |
| Cfr9I | CCCGGG | 1 cut(s) | 297 |
| CviJI | RGCY | 5 cut(s) | 56, 100, 191, 363, 595 |
| CviKI_1 | RGCY | 5 cut(s) | 56, 100, 191, 363, 595 |
| DdeI | CTNAG | 1 cut(s) | 270 |
| EaeI | YGGCCR | 1 cut(s) | 54 |
| Eam1104I | CTCTTC | 1 cut(s) | 297 |
| EarI | CTCTTC | 1 cut(s) | 297 |
| Eco130I | CCWWGG | 1 cut(s) | 590 |
| Eco47I | GGWCC | 1 cut(s) | 118 |
| Eco88I | CYCGRG | 1 cut(s) | 297 |
| EcoRII | CCWGG | 1 cut(s) | 56 |
| EcoT14I | CCWWGG | 1 cut(s) | 590 |
| ErhI | CCWWGG | 1 cut(s) | 590 |
| FaiI | YATR | 9 cut(s) | 17, 158, 222, 251, 324, 357, 393, 489, 522 |
| FauI | CCCGC | 1 cut(s) | 24 |
| FblI | GTMKAC | 2 cut(s) | 43, 356 |
| FokI | GGATG | 1 cut(s) | 280 |
| FspBI | CTAG | 3 cut(s) | 176, 207, 591 |
| GlaI | GCGC | 1 cut(s) | 130 |
| HaeII | RGCGCY | 1 cut(s) | 132 |
| HaeIII | GGCC | 2 cut(s) | 56, 363 |
| HapII | CCGG | 2 cut(s) | 53, 298 |
| HhaI | GCGC | 1 cut(s) | 131 |
| Hin6I | GCGC | 1 cut(s) | 129 |
| HinP1I | GCGC | 1 cut(s) | 129 |
| HindIII | AAGCTT | 1 cut(s) | 98 |
| HinfI | GANTC | 5 cut(s) | 104, 123, 253, 433, 557 |
| HpaII | CCGG | 2 cut(s) | 53, 298 |
| Hpy166II | GTNNAC | 3 cut(s) | 44, 118, 357 |
| Hpy188I | TCNGA | 1 cut(s) | 583 |
| Hpy188III | TCNNGA | 2 cut(s) | 226, 550 |
| Hpy8I | GTNNAC | 3 cut(s) | 44, 118, 357 |
| HpyAV | CCTTC | 1 cut(s) | 175 |
| HpyCH4III | ACNGT | 2 cut(s) | 343, 409 |
| HpyCH4V | TGCA | 2 cut(s) | 293, 443 |
| HpyF3I | CTNAG | 1 cut(s) | 270 |
| HspAI | GCGC | 1 cut(s) | 129 |
| LweI | GCATC | 3 cut(s) | 256, 302, 555 |
| MaeI | CTAG | 3 cut(s) | 176, 207, 591 |
| MaeIII | GTNAC | 1 cut(s) | 493 |
| MboII | GAAGA | 1 cut(s) | 314 |
| MluCI | AATT | 6 cut(s) | 12, 64, 144, 286, 312, 516 |
| MlyI | GAGTC | 2 cut(s) | 113, 247 |
| MmeI | TCCRAC | 2 cut(s) | 132, 219 |
| MnlI | CCTC | 2 cut(s) | 58, 81 |
| MroXI | GAANNNNTTC | 2 cut(s) | 377, 432 |
| MseI | TTAA | 2 cut(s) | 63, 93 |
| MspI | CCGG | 2 cut(s) | 53, 298 |
| MspR9I | CCNGG | 3 cut(s) | 58, 298, 299 |
| MvaI | CCWGG | 1 cut(s) | 58 |
| NciI | CCSGG | 2 cut(s) | 298, 299 |
| NlaIV | GGNNCC | 1 cut(s) | 36 |
| PdmI | GAANNNNTTC | 2 cut(s) | 377, 432 |
| PfeI | GAWTC | 3 cut(s) | 123, 433, 557 |
| PleI | GAGTC | 2 cut(s) | 112, 247 |
| PpsI | GAGTC | 2 cut(s) | 112, 247 |
| PshBI | ATTAAT | 1 cut(s) | 63 |
| PsiI | TTATAA | 1 cut(s) | 17 |
| Psp6I | CCWGG | 1 cut(s) | 56 |
| PspGI | CCWGG | 1 cut(s) | 56 |
| PspN4I | GGNNCC | 1 cut(s) | 36 |
| PspPI | GGNCC | 1 cut(s) | 118 |
| SaqAI | TTAA | 2 cut(s) | 63, 93 |
| Sau96I | GGNCC | 1 cut(s) | 118 |
| SchI | GAGTC | 2 cut(s) | 113, 247 |
| ScrFI | CCNGG | 3 cut(s) | 58, 298, 299 |
| SetI | ASST | 3 cut(s) | 102, 117, 419 |
| SfaNI | GCATC | 3 cut(s) | 256, 302, 555 |
| SinI | GGWCC | 1 cut(s) | 118 |
| SmaI | CCCGGG | 1 cut(s) | 299 |
| SmlI | CTYRAG | 3 cut(s) | 73, 101, 467 |
| SmoI | CTYRAG | 3 cut(s) | 73, 101, 467 |
| Sse9I | AATT | 6 cut(s) | 12, 64, 144, 286, 312, 516 |
| SsiI | CCGC | 2 cut(s) | 31, 211 |
| SspMI | CTAG | 3 cut(s) | 176, 207, 591 |
| StyD4I | CCNGG | 3 cut(s) | 56, 296, 297 |
| StyI | CCWWGG | 1 cut(s) | 590 |
| TaaI | ACNGT | 2 cut(s) | 343, 409 |
| TaqI | TCGA | 2 cut(s) | 327, 419 |
| TaqII | GACCGA | 1 cut(s) | 135 |
| TasI | AATT | 6 cut(s) | 12, 64, 144, 286, 312, 516 |
| TfiI | GAWTC | 3 cut(s) | 123, 433, 557 |
| Tru1I | TTAA | 2 cut(s) | 63, 93 |
| Tru9I | TTAA | 2 cut(s) | 63, 93 |
| TscAI | CASTG | 1 cut(s) | 348 |
| TspDTI | ATGAA | 5 cut(s) | 156, 195, 386, 425, 441 |
| TspGWI | ACGGA | 1 cut(s) | 549 |
| TspMI | CCCGGG | 1 cut(s) | 297 |
| TspRI | CASTG | 1 cut(s) | 348 |
| VpaK11BI | GGWCC | 1 cut(s) | 118 |
| VspI | ATTAAT | 1 cut(s) | 63 |
| XapI | RAATTY | 1 cut(s) | 144 |
| XmaI | CCCGGG | 1 cut(s) | 297 |
| XmaJI | CCTAGG | 1 cut(s) | 590 |
| XmiI | GTMKAC | 2 cut(s) | 43, 356 |
| XmnI | GAANNNNTTC | 2 cut(s) | 377, 432 |
| XspI | CTAG | 3 cut(s) | 176, 207, 591 |