MD02G1024100.v1.1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000095
Physical Location & Seq
Reverse (-)
1791298 .. 1793653
2356 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1024100.v1.1.491

Sequence Viewer

Length: 1041 bp
ATGTATTTCTCTCTTCTTTTCTGTATATGCAAGGATGATGGGCACAGCTGGGCCGTGCTGCAGGACCAAATCAGTAATTTACCACCCGAAATCCTTGTCTGTATAGTGTCACTCTTGCCGCTAAAGGAAGCAGCAGCTACTAGTATTCTTTCTAGCGATGCTGTTGAGTTCTTGTTGTCCAACTGTCCAGTTCTAGAACGTTTGTCGCTGAGTTTTGCCAAAGATTTAGGCAAGCTAAGAGTGATAGGTCCCTCCATCGCGTTGAAATATTTAGAGATAAAGTATTGCCTTGATCTCAGATTCATTGAGATCTCTGGTGGAAACATTGTCTCCTTTATTTATTGTGGACCGATAAGAGATTTGAGTTTGAATAATGTGCCCTTGCTGGTTGAGGTATCCATTTACAAGTGGGGCACTTTTGCTGAATTCATTAGGCTTGCGTTCAGTCAACTCTCATGCTGTCTTTCTCATTTAGAGACCCTGAAGCTGGATATCAGGAAAGTGGTTAGCATACTTATCCCATGTTATTTGGTTGAGATCAAGTATTGTCTCGTCCCTTACTCAGTTGTTGTTGGCTTTCAGGTCTACAATCAGAATCATGCGTTTCCCGCATTATCAAATCTAAAGCATTTGGAATTATTAGTGGATGCCGACTACTGTCTGTCCCTTGGTCACTTAGCTTCTTTCATGAAGGCAGCTCCTGACTTGCGCAGCCTTGTTTTGGGGGTATTTGGTTTCAGAACCTCCAACAAGGACATGGCAATACTAGAGAAAGTTTCCAAACAACCCCATCACTGCCTCAAGGTGGTAGAAATAGCAGGGTATCGGGGTCATAAGTGTTGCGTAAAGCATGTCAGGTACTTGGTGAAGAATGCTGTTGCACTGGAGAAGATTGTTATAAATCCTGTCCGGTTTTGGGGTTGGCCTTGGGGATTCGATAGCGATGCCCTACTGGAGAATGAGGAAGAGAATGCAAGAGATCATGCTATCCAACACCTGAAGAAAAAAGTGCCTTCTAGTATAGAATTTGTGTGCCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

347

Amino Acids

38.93

Weight (kDa)

7.51

Isoelectric Point (pI)

34.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 50 - 166 9e-11 At1g61320/AtMIF1, LRR domain
LRR_At1g61320_AtMIF1 PF23622 205 - 305 6.8e-09 At1g61320/AtMIF1, LRR domain
FBD PF08387 265 - 300 2.5e-06 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000095)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04260 FvH4_1g04270 FvH4_1g04271 FvH4_1g04280 FvH4_1g15681 FvH4_1g15870 FvH4_1g15871 FvH4_1g15880 FvH4_1g15890 FvH4_1g15890 FvH4_1g15890 FvH4_2g27801 FvH4_2g38801 FvH4_3g15922 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01850 FvH4_6g01861 FvH4_6g01970 FvH4_6g01970 FvH4_6g04740 FvH4_6g05140 FvH4_6g05150 FvH4_6g05160 FvH4_6g05620 FvH4_6g43901 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150 FvH4_7g08150
malus_domestica MD02G1016200.v1.1 MD02G1024100.v1.1 MD02G1024500.v1.1 MD02G1269100.v1.1 MD05G1360100.v1.1 MD08G1218100.v1.1 MD10G1330300.v1.1 MD11G1200500.v1.1 MD12G1064700.v1.1 MD14G1064800.v1.1 MD15G1437600.v1.1
prunus_persica Prupe.1G269300_v2.0.a1 Prupe.1G269300_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404400_v2.0.a1 Prupe.1G404600_v2.0.a1 Prupe.3G194200_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.4G126500_v2.0.a1 Prupe.5G083600_v2.0.a1 Prupe.5G181600_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354300_v2.0.a1 Prupe.6G354500_v2.0.a1 Prupe.6G354600_v2.0.a1 Prupe.7G069200_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G069300_v2.0.a1 Prupe.7G247200_v2.0.a1 Prupe.8G038200_v2.0.a1 Prupe.8G159200_v2.0.a1 Prupe.8G168400_v2.0.a1 Prupe.8G213700_v2.0.a1 Prupe.I001500_v2.0.a1
pyrus_communis pycom01g10450 pycom02g01440 pycom02g02050 pycom02g02060 pycom05g32510 pycom10g27970 pycom12g05660 pycom14g05250 pycom15g14470
rosa_chinensis RchiOBHm_Chr1g0330451 RchiOBHm_Chr1g0330541 RchiOBHm_Chr1g0360451 RchiOBHm_Chr2g0105201 RchiOBHm_Chr2g0105211 RchiOBHm_Chr2g0105241 RchiOBHm_Chr2g0105251 RchiOBHm_Chr2g0105261 RchiOBHm_Chr2g0160681 RchiOBHm_Chr3g0448841 RchiOBHm_Chr3g0448851 RchiOBHm_Chr3g0449531 RchiOBHm_Chr3g0449541 RchiOBHm_Chr3g0449551 RchiOBHm_Chr3g0449571 RchiOBHm_Chr3g0449581 RchiOBHm_Chr3g0449591 RchiOBHm_Chr3g0449601 RchiOBHm_Chr3g0449821 RchiOBHm_Chr3g0471621 RchiOBHm_Chr3g0480841 RchiOBHm_Chr5g0026831 RchiOBHm_Chr5g0026841 RchiOBHm_Chr6g0298681 RchiOBHm_Chr6g0298691 RchiOBHm_Chr6g0302471 RchiOBHm_Chr7g0184471 RchiOBHm_Chr7g0184481 RchiOBHm_Chr7g0197551
rosa_laevigata RLG00000003925 RLG00000004972 RLG00000016059 RLG00000017409 RLG00000023448 RLG00000023621 RLG00000025792 RLG00000025793 RLG00000025816 RLG00000025871 RLG00000027807 RLG00000029809 RLG00000032963
rosa_multiflora Rmu_co8092536.1_g000001 Rmu_co8349415.1_g000001 Rmu_co8375699.1_g000001 Rmu_co8381287.1_g000001 Rmu_co8442591.1_g000001 Rmu_co8442591.1_g000002 Rmu_co8446009.1_g000001 Rmu_co8468183.1_g000001 Rmu_sc0000430.1_g000001 Rmu_sc0000430.1_g000004 Rmu_sc0000430.1_g000012 Rmu_sc0000610.1_g000007 Rmu_sc0001122.1_g000011 Rmu_sc0001170.1_g000015 Rmu_sc0001407.1_g000011 Rmu_sc0001557.1_g000012 Rmu_sc0001557.1_g000013 Rmu_sc0002200.1_g000011 Rmu_sc0004831.1_g000010 Rmu_sc0004838.1_g000013 Rmu_sc0006734.1_g000010 Rmu_sc0007290.1_g000003 Rmu_sc0011021.1_g000011 Rmu_sc0012217.1_g000006 Rmu_sc0012984.1_g000017 Rmu_sc0013983.1_g000003 Rmu_sc0018347.1_g000001 Rmu_sc0021523.1_g000001 Rmu_sc0026421.1_g000001 Rmu_sc0026421.1_g000002 Rmu_sc0027913.1_g000002 Rmu_sc0037242.1_g000001 Rmu_ssc0000031.1_g000002 Rmu_ssc0000031.1_g000003 Rmu_ssc0000172.1_g000019 Rmu_ssc0000337.1_g000013 Rmu_ssc0000368.1_g000069
rosa_roxburghii Rroxscaffold_1G00013770 Rroxscaffold_1G00017620 Rroxscaffold_1G00052670 Rroxscaffold_1G00052680 Rroxscaffold_1G00052690 Rroxscaffold_2G00089490 Rroxscaffold_2G00089510 Rroxscaffold_2G00138340 Rroxscaffold_2G00138350 Rroxscaffold_2G00138380 Rroxscaffold_2G00151560 Rroxscaffold_2G00151570 Rroxscaffold_3G00220490 Rroxscaffold_3G00258350 Rroxscaffold_4G00296100 Rroxscaffold_6G00400970 Rroxscaffold_6G00403030 Rroxscaffold_6G00427050 Rroxscaffold_6G00427490 Rroxscaffold_6G00427500 Rroxscaffold_6G00427640 Rroxscaffold_6G00427660 Rroxscaffold_7G00165730 Rroxscaffold_7G00165740
rosa_rugosa Rorug01G0194900 Rorug01G0277200 Rorug01G0277300 Rorug01G0277400 Rorug01G0277500 Rorug01G0277600 Rorug01G0277700 Rorug01G0277800 Rorug02G0003600 Rorug02G0126800 Rorug02G0126900 Rorug02G0484800 Rorug02G0484900 Rorug02G0623600 Rorug03G0186800 Rorug06G0314400 Rorug07G0041200 Rorug07G0041300 Rorug07G0041300 Rorug07G0041400
rosa_samantha Rh1AG107100 Rh1AG174800 Rh1AG212900 Rh1AG291000 Rh1BG085200 Rh1DG112700 Rh2AG048800 Rh2AG177600 Rh2AG549900 Rh2BG047600 Rh2BG185700 Rh2BG185800 Rh2BG186000 Rh2BG186100 Rh2BG564400 Rh2CG049700 Rh2CG182100 Rh2CG182300 Rh3BG014900 Rh3BG020400 Rh3BG020500 Rh3BG020600 Rh3BG020700 Rh3BG020800 Rh3BG020900 Rh3BG022500 Rh3BG195200 Rh3BG271900 Rh3CG019100 Rh3CG019200 Rh3CG019300 Rh3CG019400 Rh3CG021200 Rh3CG267700 Rh3DG020400 Rh3DG020500 Rh3DG020600 Rh3DG020700 Rh3DG022200 Rh3DG264000 Rh5BG185300 Rh5BG185500 Rh5BG186000 Rh5BG429000 Rh6AG427600 Rh6CG439700 Rh6DG426700 Rh7BG067600 Rh7CG067900 Rh7CG068000 Rh7CG174300 Rh7DG167300
rosa_wichuraiana Rw0G006170 Rw1G008880 Rw1G014570 Rw1G025770 Rw2G013940 Rw2G013960 Rw2G045560 Rw3G001610 Rw3G001620 Rw3G001630 Rw3G001650 Rw3G001790 Rw3G021340 Rw4G018910 Rw5G017150 Rw5G017160 Rw7G014440 Rw7G040330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 899
Acc16I TGCGCA 1 cut(s) 710
AccI GTMKAC 1 cut(s) 585
AccII CGCG 1 cut(s) 260
AciI CCGC 2 cut(s) 119, 609
AclI AACGTT 1 cut(s) 199
AcsI RAATTY 2 cut(s) 425, 1025
AcuI CTGAAG 2 cut(s) 503, 1019
AfaI GTAC 1 cut(s) 860
AfiI CCNNNNNNNGG 4 cut(s) 487, 721, 805, 916
AgsI TTSAA 2 cut(s) 265, 370
AhlI ACTAGT 1 cut(s) 140
AluBI AGCT 6 cut(s) 48, 137, 235, 487, 680, 698
AluI AGCT 6 cut(s) 48, 137, 235, 487, 680, 698
Alw26I GTCTC 3 cut(s) 334, 470, 554
AlwNI CAGNNNCTG 1 cut(s) 701
AoxI GGCC 2 cut(s) 51, 923
ApeKI GCWGC 5 cut(s) 58, 131, 134, 695, 711
ApoI RAATTY 2 cut(s) 425, 1025
ArsI GACNNNNNNTTYG 2 cut(s) 81, 113
AspLEI GCGC 1 cut(s) 711
AspS9I GGNCC 4 cut(s) 51, 64, 248, 347
AsuHPI GGTGA 1 cut(s) 877
AvaII GGWCC 3 cut(s) 64, 248, 347
BaeGI GKGCMC 3 cut(s) 45, 381, 416
BbvI GCAGC 5 cut(s) 45, 143, 146, 707, 723
BccI CCATC 3 cut(s) 32, 263, 798
BceAI ACGGC 1 cut(s) 38
BcgI CGANNNNNNTGC 2 cut(s) 926, 960
BciVI GTATCC 1 cut(s) 406
BcoDI GTCTC 3 cut(s) 334, 470, 554
BcuI ACTAGT 1 cut(s) 140
BfaI CTAG 5 cut(s) 141, 153, 194, 767, 1017
BfmI CTRYAG 1 cut(s) 59
BfuI GTATCC 1 cut(s) 406
BglII AGATCT 1 cut(s) 309
BisI GCNGC 6 cut(s) 59, 119, 132, 135, 696, 712
BlsI GCNGC 6 cut(s) 60, 120, 133, 136, 697, 713
Bme18I GGWCC 3 cut(s) 64, 248, 347
BmgT120I GGNCC 4 cut(s) 51, 64, 248, 347
BmiI GGNNCC 1 cut(s) 250
BmsI GCATC 3 cut(s) 148, 637, 934
BoxI GACNNNNGTC 1 cut(s) 657
BpmI CTGGAG 2 cut(s) 905, 974
BpuEI CTTGAG 1 cut(s) 785
BsaI GGTCTC 1 cut(s) 470
BsaJI CCNNGG 2 cut(s) 667, 926
BsaWI WCCGGW 1 cut(s) 909
BsaXI ACNNNNNCTCC 2 cut(s) 314, 344
Bsc4I CCNNNNNNNGG 4 cut(s) 487, 721, 805, 916
Bse1I ACTGG 3 cut(s) 188, 888, 957
BseDI CCNNGG 2 cut(s) 667, 926
BseGI GGATG 2 cut(s) 40, 652
BseLI CCNNNNNNNGG 4 cut(s) 487, 721, 805, 916
BseMII CTCAG 3 cut(s) 200, 310, 576
BseNI ACTGG 3 cut(s) 188, 888, 957
BseSI GKGCMC 3 cut(s) 45, 381, 416
BseXI GCAGC 5 cut(s) 45, 143, 146, 707, 723
BseYI CCCAGC 1 cut(s) 48
Bsh1236I CGCG 1 cut(s) 260
BshFI GGCC 2 cut(s) 53, 925
BsiSI CCGG 1 cut(s) 910
BslFI GGGAC 3 cut(s) 234, 539, 649
BslI CCNNNNNNNGG 4 cut(s) 487, 721, 805, 916
BsmAI GTCTC 3 cut(s) 334, 470, 554
BsmFI GGGAC 3 cut(s) 234, 539, 649
BsmI GAATGC 2 cut(s) 877, 976
BsnI GGCC 2 cut(s) 53, 925
Bso31I GGTCTC 1 cut(s) 470
Bsp1286I GDGCHC 3 cut(s) 45, 381, 416
Bsp143I GATC 4 cut(s) 292, 309, 537, 979
BspACI CCGC 2 cut(s) 119, 609
BspANI GGCC 2 cut(s) 53, 925
BspCNI CTCAG 3 cut(s) 201, 309, 575
BspFNI CGCG 1 cut(s) 260
BspHI TCATGA 1 cut(s) 687
BspLI GGNNCC 1 cut(s) 250
BspMAI CTGCAG 1 cut(s) 63
BspTNI GGTCTC 1 cut(s) 470
BsrI ACTGG 3 cut(s) 188, 888, 957
BssECI CCNNGG 2 cut(s) 667, 926
BssMI GATC 4 cut(s) 292, 309, 537, 979
BssT1I CCWWGG 2 cut(s) 667, 926
Bst4CI ACNGT 2 cut(s) 185, 659
Bst6I CTCTTC 2 cut(s) 18, 960
BstC8I GCNNGC 2 cut(s) 233, 438
BstDEI CTNAG 5 cut(s) 209, 236, 296, 562, 676
BstF5I GGATG 2 cut(s) 40, 652
BstFNI CGCG 1 cut(s) 260
BstHHI GCGC 1 cut(s) 711
BstKTI GATC 4 cut(s) 295, 312, 540, 982
BstMAI GTCTC 3 cut(s) 334, 470, 554
BstMBI GATC 4 cut(s) 292, 309, 537, 979
BstMWI GCNNNNNNNGC 1 cut(s) 608
BstNSI RCATGY 1 cut(s) 854
BstPAI GACNNNNGTC 1 cut(s) 657
BstSFI CTRYAG 1 cut(s) 59
BstSLI GKGCMC 3 cut(s) 45, 381, 416
BstUI CGCG 1 cut(s) 260
BstV1I GCAGC 5 cut(s) 45, 143, 146, 707, 723
BstX2I RGATCY 1 cut(s) 309
BstYI RGATCY 1 cut(s) 309
BsuI GTATCC 1 cut(s) 406
BsuRI GGCC 2 cut(s) 53, 925
BtgZI GCGATG 3 cut(s) 171, 241, 957
BtsCI GGATG 2 cut(s) 40, 652
BtsI GCAGTG 1 cut(s) 793
BtsIMutI CAGTG 2 cut(s) 793, 881
Cac8I GCNNGC 2 cut(s) 233, 438
CaiI CAGNNNCTG 1 cut(s) 701
CciI TCATGA 1 cut(s) 687
CfoI GCGC 1 cut(s) 711
Cfr13I GGNCC 4 cut(s) 51, 64, 248, 347
Csp6I GTAC 1 cut(s) 859
CviAII CATG 7 cut(s) 456, 522, 599, 688, 757, 851, 983
CviQI GTAC 1 cut(s) 859
DdeI CTNAG 5 cut(s) 209, 236, 296, 562, 676
DpnI GATC 4 cut(s) 294, 311, 539, 981
DpnII GATC 4 cut(s) 292, 309, 537, 979
Eam1104I CTCTTC 2 cut(s) 18, 960
EarI CTCTTC 2 cut(s) 18, 960
Eco130I CCWWGG 2 cut(s) 667, 926
Eco31I GGTCTC 1 cut(s) 470
Eco32I GATATC 1 cut(s) 493
Eco47I GGWCC 3 cut(s) 64, 248, 347
Eco57I CTGAAG 2 cut(s) 503, 1019
EcoO109I RGGNCCY 1 cut(s) 248
EcoRI GAATTC 1 cut(s) 425
EcoRV GATATC 1 cut(s) 493
EcoT14I CCWWGG 2 cut(s) 667, 926
ErhI CCWWGG 2 cut(s) 667, 926
FaeI CATG 7 cut(s) 459, 525, 602, 691, 760, 854, 986
FaqI GGGAC 3 cut(s) 234, 539, 649
FatI CATG 7 cut(s) 455, 521, 598, 687, 756, 850, 982
FauI CCCGC 1 cut(s) 616
FblI GTMKAC 1 cut(s) 585
Fnu4HI GCNGC 6 cut(s) 59, 119, 132, 135, 696, 712
FokI GGATG 2 cut(s) 47, 659
Fsp4HI GCNGC 6 cut(s) 59, 119, 132, 135, 696, 712
FspBI CTAG 5 cut(s) 141, 153, 194, 767, 1017
FspI TGCGCA 1 cut(s) 710
GlaI GCGC 1 cut(s) 710
GluI GCNGC 6 cut(s) 59, 119, 132, 135, 696, 712
GsaI CCCAGC 1 cut(s) 52
GsuI CTGGAG 2 cut(s) 905, 974
HaeIII GGCC 2 cut(s) 53, 925
HapII CCGG 1 cut(s) 910
HhaI GCGC 1 cut(s) 711
Hin1II CATG 7 cut(s) 459, 525, 602, 691, 760, 854, 986
Hin6I GCGC 1 cut(s) 709
HinP1I GCGC 1 cut(s) 709
HincII GTYRAC 1 cut(s) 449
HindII GTYRAC 1 cut(s) 449
HinfI GANTC 3 cut(s) 300, 595, 933
HpaII CCGG 1 cut(s) 910
HphI GGTGA 1 cut(s) 877
Hpy166II GTNNAC 3 cut(s) 347, 449, 586
Hpy188I TCNGA 3 cut(s) 299, 594, 740
Hpy188III TCNNGA 4 cut(s) 194, 496, 688, 701
Hpy8I GTNNAC 3 cut(s) 347, 449, 586
HpyAV CCTTC 2 cut(s) 685, 1023
HpyCH4III ACNGT 2 cut(s) 185, 659
HpyCH4IV ACGT 1 cut(s) 199
HpyCH4V TGCA 4 cut(s) 30, 61, 881, 974
HpyF10VI GCNNNNNNNGC 1 cut(s) 608
HpyF3I CTNAG 5 cut(s) 209, 236, 296, 562, 676
HpySE526I ACGT 1 cut(s) 199
Hsp92II CATG 7 cut(s) 459, 525, 602, 691, 760, 854, 986
HspAI GCGC 1 cut(s) 709
Kzo9I GATC 4 cut(s) 292, 309, 537, 979
LmnI GCTCC 1 cut(s) 703
Lsp1109I GCAGC 5 cut(s) 45, 143, 146, 707, 723
LweI GCATC 3 cut(s) 148, 637, 934
MaeI CTAG 5 cut(s) 141, 153, 194, 767, 1017
MaeII ACGT 1 cut(s) 199
MaeIII GTNAC 2 cut(s) 108, 671
MalI GATC 4 cut(s) 294, 311, 539, 981
MboI GATC 4 cut(s) 292, 309, 537, 979
MboII GAAGA 5 cut(s) 5, 880, 901, 977, 1012
MflI RGATCY 1 cut(s) 309
MhlI GDGCHC 3 cut(s) 45, 381, 416
MluCI AATT 4 cut(s) 76, 425, 635, 1025
MmeI TCCRAC 3 cut(s) 204, 771, 1015
MnlI CCTC 5 cut(s) 262, 385, 754, 809, 955
MspA1I CMGCKG 1 cut(s) 48
MspI CCGG 1 cut(s) 910
Mva1269I GAATGC 2 cut(s) 877, 976
MvnI CGCG 1 cut(s) 260
MwoI GCNNNNNNNGC 1 cut(s) 608
NdeII GATC 4 cut(s) 292, 309, 537, 979
NlaIII CATG 7 cut(s) 459, 525, 602, 691, 760, 854, 986
NlaIV GGNNCC 1 cut(s) 250
NmuCI GTSAC 2 cut(s) 108, 671
NsbI TGCGCA 1 cut(s) 710
NspI RCATGY 1 cut(s) 854
PagI TCATGA 1 cut(s) 687
PctI GAATGC 2 cut(s) 877, 976
PfeI GAWTC 3 cut(s) 300, 595, 933
PkrI GCNGC 6 cut(s) 60, 120, 133, 136, 697, 713
PpuMI RGGWCCY 1 cut(s) 248
PshAI GACNNNNGTC 1 cut(s) 657
PsiI TTATAA 1 cut(s) 899
Psp1406I AACGTT 1 cut(s) 199
Psp5II RGGWCCY 1 cut(s) 248
PspFI CCCAGC 1 cut(s) 48
PspN4I GGNNCC 1 cut(s) 250
PspPI GGNCC 4 cut(s) 51, 64, 248, 347
PspPPI RGGWCCY 1 cut(s) 248
PstI CTGCAG 1 cut(s) 63
PstNI CAGNNNCTG 1 cut(s) 701
PsuI RGATCY 1 cut(s) 309
PvuII CAGCTG 1 cut(s) 48
RsaI GTAC 1 cut(s) 860
RsaNI GTAC 1 cut(s) 859
SatI GCNGC 6 cut(s) 59, 119, 132, 135, 696, 712
Sau3AI GATC 4 cut(s) 292, 309, 537, 979
Sau96I GGNCC 4 cut(s) 51, 64, 248, 347
SduI GDGCHC 3 cut(s) 45, 381, 416
SfaNI GCATC 3 cut(s) 148, 637, 934
SfcI CTRYAG 1 cut(s) 59
SinI GGWCC 3 cut(s) 64, 248, 347
SmlI CTYRAG 1 cut(s) 800
SmoI CTYRAG 1 cut(s) 800
SpeI ACTAGT 1 cut(s) 140
Sse9I AATT 4 cut(s) 76, 425, 635, 1025
SsiI CCGC 2 cut(s) 119, 609
SspI AATATT 1 cut(s) 269
SspMI CTAG 5 cut(s) 141, 153, 194, 767, 1017
StyI CCWWGG 2 cut(s) 667, 926
TaaI ACNGT 2 cut(s) 185, 659
TaiI ACGT 1 cut(s) 202
TaqI TCGA 1 cut(s) 936
TaqII GACCGA 1 cut(s) 364
TasI AATT 4 cut(s) 76, 425, 635, 1025
TauI GCSGC 1 cut(s) 121
TfiI GAWTC 3 cut(s) 300, 595, 933
TscAI CASTG 2 cut(s) 800, 888
TseFI GTSAC 2 cut(s) 108, 671
TseI GCWGC 5 cut(s) 58, 131, 134, 695, 711
Tsp45I GTSAC 2 cut(s) 108, 671
TspDTI ATGAA 4 cut(s) 292, 418, 676, 704
TspRI CASTG 2 cut(s) 800, 888
VpaK11BI GGWCC 3 cut(s) 64, 248, 347
XapI RAATTY 2 cut(s) 425, 1025
XbaI TCTAGA 1 cut(s) 193
XceI RCATGY 1 cut(s) 854
XcmI CCANNNNNNNNNTGG 1 cut(s) 754
XmiI GTMKAC 1 cut(s) 585
XspI CTAG 5 cut(s) 141, 153, 194, 767, 1017
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.